F003646

General Info

Members Datasets Scaffolds Average Seq Length
100 91 200 501

Family's Representative Sequence

Representative Sequence 3300028558|Ga0265326_10013609|Ga0265326_100136092
Length 567
Sequence VTSGDASTRALAEAIDAAEPTETRGLGELIARLDAEGRLRGGGSGGTAEALRREASGGPDRSDLPIRGIAFDSRAVKPGFLFVAVPGDHADGHDYAAAAVARGASAVLVERLIADLPARQIVVDRGRGALAVAAAWWYGDPSRELGVVGITGTDGKTTTSFLATAVLEAAGISTGMLTTAELKVGGLRGPNPEHVTTPEAPQLQRTLRAMVDAADAAAVLETTSHGLALDRVGGVDYDVAIFTNLTHEHLELHGTFEAYRAAKLSLFERLGGGREPGDLRPGKHLPRMWPRTAIVNHDDPSAPLFEMAAASAGAVLIKFGLSPQADVRAAAVTEDARRLRIDVQTPRWRGEVELQLMGRFNVYNSLAAIALGEALELDPAAIRAGVSGVRGVPGRMERIECGQEFGVIVDYAHSPASLQTVLDQLAPATGPGAGLIVVFGSAGERDVRKRPMMGRIAGERCRLVVVTDEDPRGEDREAILDQIAAGAEAAGKRRGDDLLCIPDRREAIAAAFERAEPGDLVLLAGKGHEQSIIMGDGPRAWDERTEAVAALRRMGFAGAGSLEAIGR

Samples

Sample ID Description Type Environment
1 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
2 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
10 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
11 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
12 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
13 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
14 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
15 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
16 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
18 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
19 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
20 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
21 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
22 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
23 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
29 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
30 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
31 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
32 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
33 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
34 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
35 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
36 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
37 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
38 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
39 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
40 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
41 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
42 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
43 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
44 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
45 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
46 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
47 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
48 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
49 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
50 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
51 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
52 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
53 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
54 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
55 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
56 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
57 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
59 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
60 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
61 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
62 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
63 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
64 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
65 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
66 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
67 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
68 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
69 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
70 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
71 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
72 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
73 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
74 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
75 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
76 2857472729 Cohnella sp. R-74144 Isolate Unclassified
77 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
78 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
79 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
80 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
81 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
82 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
83 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
84 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
85 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
86 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
87 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
88 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
89 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
90 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
91 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73
Metatranscriptomes 1
Isolates 26

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2
Nodule 1
Rhizoplane 5
Rhizosphere 72
Stem 0
Stem Tuber 0
Unclassified 6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265326_10013609 3300028558 Bacteria 2378
2 Ga0055532_1001190 3300003758 Bacteria 7817
3 Ga0070660_100043975 3300005339 Unclassified 3414
4 Ga0070659_100020934 3300005366 Unclassified 4974
5 Ga0070706_100025896 3300005467 Bacteria 5398
6 Ga0070707_100023915 3300005468 Bacteria 5779
7 Ga0070707_100025111 3300005468 Bacteria 5652
8 Ga0070698_100012488 3300005471 Bacteria 8992
9 Ga0070698_100037629 3300005471 Bacteria 4988
10 Ga0070699_100020757 3300005518 Bacteria 5665
11 Ga0070697_100048985 3300005536 Bacteria 3427
12 Ga0070696_100000522 3300005546 Bacteria 24349
13 Ga0075428_100001121 3300006844 Bacteria 28599
14 Ga0075434_100043242 3300006871 Bacteria 4467
15 Ga0105251_10036272 3300009011 Bacteria 2427
16 Ga0105244_10000241 3300009036 Bacteria 56117
17 Ga0105245_10033677 3300009098 Bacteria 4541
18 Ga0114129_10028177 3300009147 Bacteria 7958
19 Ga0105249_10203247 3300009553 Bacteria 1940
20 Ga0157374_10000093 3300013296 Bacteria 84512
21 Ga0157378_10055436 3300013297 Bacteria 3531
22 Ga0157378_10205575 3300013297 Bacteria 1865
23 Ga0163163_10188960 3300014325 Unclassified 2108
24 Ga0157376_10000397 3300014969 Bacteria 28315
25 Ga0213875_10000043 3300021388 Bacteria 152637
26 Ga0224712_10000406 3300022467 Bacteria 8470
27 Ga0209147_100057 3300025229 Bacteria 253870
28 Ga0207655_1000350 3300025728 Bacteria 66830
29 Ga0207690_10045460 3300025932 Unclassified 2901
30 Ga0209998_10000719 3300027717 Bacteria 8751
31 Ga0265319_1003871 3300028563 Bacteria 7642
32 Ga0265318_10008405 3300028577 Bacteria 4599
33 Ga0265323_10015167 3300028653 Bacteria 3034
34 Ga0265338_10011619 3300028800 Bacteria 10148
35 Ga0265320_10010796 3300031240 Bacteria 5413
36 Ga0265320_10034812 3300031240 Bacteria 2557
37 Ga0265325_10026125 3300031241 Bacteria 3165
38 Ga0265329_10008327 3300031242 Bacteria 3939
39 Ga0265339_10034364 3300031249 Bacteria 2850
40 Ga0265339_10044337 3300031249 Bacteria 2454
41 Ga0265331_10037783 3300031250 Bacteria 2363
42 Ga0265331_10056705 3300031250 Bacteria 1859
43 Ga0265316_10042666 3300031344 Bacteria 3623
44 Ga0265314_10031605 3300031711 Bacteria 3905
45 Ga0316576_10052266 3300031727 Bacteria 2975
46 Ga0307405_10022611 3300031731 Bacteria 3558
47 Ga0307410_10011963 3300031852 Bacteria 4991
48 Ga0307416_100040134 3300032002 Bacteria 3633
49 Ga0373943_0031146 3300035170 Bacteria 2529
50 Ga0436364_0413139 3300037853 Bacteria 254582
51 Ga0453684_0323134 3300044712 Bacteria 1747
52 Ga0495618_0014051 3300046514 Bacteria 4875
53 Ga0495640_0027269 3300046533 Bacteria 4121
54 Ga0495626_0055089 3300048091 Bacteria 1825
55 Ga0495626_0069022 3300048091 Bacteria 1593
56 Ga0496101_0132657 3300048904 Bacteria 1893
57 Ga0496105_0003525 3300048908 Bacteria 11602
58 Ga0496108_0003744 3300048911 Bacteria 12189
59 Ga0496108_0230532 3300048911 Unclassified 1610
60 Ga0496109_0009454 3300048912 Bacteria 8311
61 Ga0496117_0072798 3300048920 Bacteria 2295
62 Ga0496122_0040676 3300048925 Bacteria 3689
63 Ga0496123_0026685 3300048926 Bacteria 4320
64 Ga0496126_0003449 3300048929 Bacteria 19951
65 Ga0501039_0067797 3300049575 Bacteria 2771
66 Ga0501072_0082347 3300049588 Bacteria 2551
67 Ga0501074_0063341 3300049590 Bacteria 2664
68 Ga0501080_0024939 3300049742 Bacteria 5546
69 nmdc:mga05p37_150_c1 3300050507 Bacteria 65679
70 Ga0495601_0005359 3300053077 Bacteria 7472
71 Ga0495601_0052391 3300053077 Bacteria 2577
72 Ga0495595_0007568 3300053084 Unclassified 4446
73 Ga0495619_0002494 3300053085 Bacteria 12046
74 Ga0530510_0172829 3300061734 Bacteria 1601
75 2511179148 2510917027 Bacteria 5287437
76 2512636369 2512564013 Bacteria 6286191
77 2524186575 2524023129 Bacteria 6762600
78 2595316467 2593339198 Bacteria 7267884
79 2738837432 2738541299 Bacteria 4020721
80 2745168497 2744054657 Bacteria 5016802
81 2808868294 2808606364 Bacteria 4465927
82 2817619684 2816332336 Bacteria 5207640
83 2857463089 2857460504 Bacteria 5194327
84 2857471142 2857465823 Bacteria 6772595
85 2857473475 2857472729 Bacteria 6568124
86 2857593122 2857591370 Bacteria 6569758
87 2864999947 2864997549 Bacteria 5139696
88 2889296133 2889295896 Bacteria 4704906
89 2898907356 2898907183 Bacteria 4067722
90 2915602460 2915597211 Bacteria 6475886
91 2915612141 2915606848 Bacteria 6032732
92 2929187623 2929183550 Bacteria 6377511
93 2980125808 2980125574 Bacteria 5567337
94 2981287876 2981284811 Bacteria 4641497
95 2981292411 2981289755 Bacteria 4641509
96 2981983495 2981980479 Bacteria 4641628
97 2981988467 2981985349 Bacteria 4641497
98 3006829961 3006826541 Bacteria 4678913
99 8002322026 8002317523 Bacteria 8051857
100 8046997604 8046991243 Bacteria 8497463
101 Ga0265326_10013609
102 Ga0055532_1001190
103 Ga0070660_100043975
104 Ga0070659_100020934
105 Ga0070706_100025896
106 Ga0070707_100023915
107 Ga0070707_100025111
108 Ga0070698_100012488
109 Ga0070698_100037629
110 Ga0070699_100020757
111 Ga0070697_100048985
112 Ga0070696_100000522
113 Ga0075428_100001121
114 Ga0075434_100043242
115 Ga0105251_10036272
116 Ga0105244_10000241
117 Ga0105245_10033677
118 Ga0114129_10028177
119 Ga0105249_10203247
120 Ga0157374_10000093
121 Ga0157378_10055436
122 Ga0157378_10205575
123 Ga0163163_10188960
124 Ga0157376_10000397
125 Ga0213875_10000043
126 Ga0224712_10000406
127 Ga0209147_100057
128 Ga0207655_1000350
129 Ga0207690_10045460
130 Ga0209998_10000719
131 Ga0265319_1003871
132 Ga0265318_10008405
133 Ga0265323_10015167
134 Ga0265338_10011619
135 Ga0265320_10010796
136 Ga0265320_10034812
137 Ga0265325_10026125
138 Ga0265329_10008327
139 Ga0265339_10034364
140 Ga0265339_10044337
141 Ga0265331_10037783
142 Ga0265331_10056705
143 Ga0265316_10042666
144 Ga0265314_10031605
145 Ga0316576_10052266
146 Ga0307405_10022611
147 Ga0307410_10011963
148 Ga0307416_100040134
149 Ga0373943_0031146
150 Ga0436364_0413139
151 Ga0453684_0323134
152 Ga0495618_0014051
153 Ga0495640_0027269
154 Ga0495626_0055089
155 Ga0495626_0069022
156 Ga0496101_0132657
157 Ga0496105_0003525
158 Ga0496108_0003744
159 Ga0496108_0230532
160 Ga0496109_0009454
161 Ga0496117_0072798
162 Ga0496122_0040676
163 Ga0496123_0026685
164 Ga0496126_0003449
165 Ga0501039_0067797
166 Ga0501072_0082347
167 Ga0501074_0063341
168 Ga0501080_0024939
169 nmdc:mga05p37_150_c1
170 Ga0495601_0005359
171 Ga0495601_0052391
172 Ga0495595_0007568
173 Ga0495619_0002494
174 Ga0530510_0172829
175 2511179148
176 2512636369
177 2524186575
178 2595316467
179 2738837432
180 2745168497
181 2808868294
182 2817619684
183 2857463089
184 2857471142
185 2857473475
186 2857593122
187 2864999947
188 2889296133
189 2898907356
190 2915602460
191 2915612141
192 2929187623
193 2980125808
194 2981287876
195 2981292411
196 2981983495
197 2981988467
198 3006829961
199 8002322026
200 8046997604

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08245

Mur_ligase_M

Mur ligase middle domain

150

372

0.96

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

394

527

0.94

PF01225

Mur_ligase

Mur ligase family, catalytic domain

65

138

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bub-assembly1.cif.gz_A crystal structure of mure ligase from thermotoga maritima in complex with adp 0.9181 6 503
4bub-assembly1.cif.gz_A crystal structure of mure ligase from thermotoga maritima in complex with adp 0.9163 6 503
4bub-assembly2.cif.gz_B crystal structure of mure ligase from thermotoga maritima in complex with adp 0.9145 6 503
4bub-assembly2.cif.gz_B crystal structure of mure ligase from thermotoga maritima in complex with adp 0.9127 6 503
2xja-assembly4.cif.gz_D structure of mure from m.tuberculosis with dipeptide and adp 0.9073 6 499
ID Description Score Start End Superfamily
4c13A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.962 108 346 3.40.1190.10
2wtzD03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9596 358 495 3.90.190.20
4c13A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9541 108 346 3.40.1190.10
af_I1KPB4_561_737_3.90.190.20 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9536 350 502 3.90.190.20
1e8cB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9534 348 490 3.90.190.20
ID Description Score Start End GO Terms
AF-A0A496UJS6-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9781 301 499 GO:0005524
GO:0009058
GO:0016881
AF-A0A352UQN6-F1-model_v4 deleted 0.9765 6 497
AF-A0A2V6AFD5-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9757 1 179 GO:0005524
GO:0009058
GO:0016881
AF-A0A2N1ZZU6-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase) 0.9723 6 499 GO:0000287
GO:0005524
GO:0005737
GO:0008360
GO:0008765
GO:0009252
GO:0051301
GO:0071555
AF-A0A0B0HYV2-F1-model_v4 deleted 0.9718 6 279

Map