F026541
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 104 | 71 | 208 | 395 |
Family's Representative Sequence
| Representative Sequence | 3300013307|Ga0157372_10000855|Ga0157372_100008556 |
| Length | 435 |
| Sequence | MSKYFGTWQNFLTDFFQIPSALSEKHYFCRDYNLIKAVFMKTVNDYNFSGQKALIRVDFNVPLDDKFSVTDDTRIRAALPTINKILSDGGAVILMSHLGRPKEGPTDKYSLKHVVAHLSKLLGRPVAFSPDCIGEDAKNAANSLKAGEVLLLENLRFYKEEEKGDVEFAKKLSANGTFYVNDAFGTAHRAHASTAVIAQFFPQNKCFGYVMSGELASVDKVLNNSEKPFTAIMGGAKVSDKILILEQLINKADNIIIGGGMAFTFVKAQGGNIGKSLVEEDKLQTALNILADAKSKGVNIYIPVDAVVADNFSNDANTQTVDIKNIPDGWMGLDIGPETEKLFSDVIADSKTILWNGPMGVFEMSSFEHGTKKVAMAIASATEGTAFSLIGGGDSVAAINKYELAEKVSYVSTGGGALLEYIESGSLPGVDAIGK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 2 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 3 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 4 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 6 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 7 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 9 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 10 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 11 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 13 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 14 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 15 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 16 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 17 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 18 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 19 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 20 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 21 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 22 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 24 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 25 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 26 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 27 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 28 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 29 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 30 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 31 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 32 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 33 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 34 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 35 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 36 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 37 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 38 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 39 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 40 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 41 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 42 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 43 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 44 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 45 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 46 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 47 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 48 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 49 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 50 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 51 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 52 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 53 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 54 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 55 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 56 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 57 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 58 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 59 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 60 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 61 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 62 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 63 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 64 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 65 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 66 | 2840677318 | Chitinophaga alhagiae T22 | Isolate | Unclassified |
| 67 | 2883068021 | Chitinophaga rhizosphaerae T16R-86 | Isolate | Rhizosphere |
| 68 | 2884791551 | Chitinophaga oryzae 1310 | Isolate | Unclassified |
| 69 | 2890804823 | Fluviicola sp. SGL-29 | Isolate | Rhizosphere |
| 70 | 2896085136 | Chitinophaga alhagiae T22 | Isolate | Unclassified |
| 71 | 2896109856 | Chitinophaga sp. SYP-B3965 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.27 |
| Metatranscriptomes | 0.96 |
| Isolates | 5.77 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 1.92 |
| Rhizosphere | 92.31 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 6.73 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0157372_10000855 | 3300013307 | Bacteria | 33034 |
| 2 | JGI24740J21852_10001807 | 3300001979 | Bacteria | 9809 |
| 3 | Ga0065704_10002380 | 3300005289 | Bacteria | 9001 |
| 4 | Ga0070670_100013945 | 3300005331 | Bacteria | 6892 |
| 5 | Ga0070680_100325541 | 3300005336 | Bacteria | 1305 |
| 6 | Ga0070713_100182315 | 3300005436 | Bacteria | 1887 |
| 7 | Ga0070678_100051320 | 3300005456 | Bacteria | 2989 |
| 8 | Ga0068857_100160537 | 3300005577 | Bacteria | 2040 |
| 9 | Ga0068856_100007477 | 3300005614 | Bacteria | 10664 |
| 10 | Ga0081538_10013722 | 3300005981 | Bacteria | 6401 |
| 11 | Ga0070716_100027051 | 3300006173 | Unclassified | 3077 |
| 12 | Ga0075434_100008610 | 3300006871 | Bacteria | 9498 |
| 13 | Ga0105240_10031042 | 3300009093 | Bacteria | 6934 |
| 14 | Ga0157371_10006538 | 3300013102 | Bacteria | 9588 |
| 15 | Ga0157371_10017511 | 3300013102 | Bacteria | 5321 |
| 16 | Ga0207660_10266117 | 3300025917 | Bacteria | 1357 |
| 17 | Ga0207662_10110395 | 3300025918 | Bacteria | 1714 |
| 18 | Ga0207650_10012391 | 3300025925 | Bacteria | 5887 |
| 19 | Ga0207664_10331587 | 3300025929 | Bacteria | 1344 |
| 20 | Ga0207665_10042472 | 3300025939 | Unclassified | 3039 |
| 21 | Ga0207667_10072777 | 3300025949 | Bacteria | 3572 |
| 22 | Ga0207702_10022393 | 3300026078 | Bacteria | 5239 |
| 23 | Ga0207674_10102806 | 3300026116 | Bacteria | 2837 |
| 24 | Ga0265327_10003330 | 3300031251 | Bacteria | 15537 |
| 25 | Ga0265327_10008181 | 3300031251 | Bacteria | 7850 |
| 26 | Ga0265327_10019516 | 3300031251 | Bacteria | 4164 |
| 27 | Ga0316579_10047243 | 3300031691 | Bacteria | 2010 |
| 28 | Ga0316576_10029710 | 3300031727 | Unclassified | 3866 |
| 29 | Ga0316576_10058006 | 3300031727 | Bacteria | 2831 |
| 30 | Ga0316576_10128100 | 3300031727 | Unclassified | 1908 |
| 31 | Ga0316576_10159700 | 3300031727 | Bacteria | 1700 |
| 32 | Ga0316578_10039678 | 3300031728 | Bacteria | 2720 |
| 33 | Ga0316578_10187618 | 3300031728 | Bacteria | 1246 |
| 34 | Ga0307416_100142941 | 3300032002 | Bacteria | 2178 |
| 35 | Ga0307411_10174907 | 3300032005 | Bacteria | 1623 |
| 36 | Ga0316585_10021134 | 3300032137 | Bacteria | 1997 |
| 37 | Ga0316580_10015990 | 3300032139 | Unclassified | 2298 |
| 38 | Ga0316593_10027165 | 3300032168 | Bacteria | 1834 |
| 39 | Ga0373927_0011131 | 3300035695 | Bacteria | 5992 |
| 40 | Ga0316582_0007607 | 3300036647 | Bacteria | 5776 |
| 41 | Ga0316582_0032612 | 3300036647 | Bacteria | 3194 |
| 42 | Ga0316584_0004906 | 3300036712 | Bacteria | 8902 |
| 43 | Ga0316584_0022826 | 3300036712 | Unclassified | 4566 |
| 44 | Ga0373925_0035728 | 3300037068 | Bacteria | 3668 |
| 45 | Ga0395899_0000021 | 3300037312 | Bacteria | 391702 |
| 46 | Ga0395899_0020570 | 3300037312 | Bacteria | 5002 |
| 47 | Ga0395899_0039959 | 3300037312 | Bacteria | 3510 |
| 48 | Ga0395905_0000001 | 3300037471 | Bacteria | 2037079 |
| 49 | Ga0395905_0000433 | 3300037471 | Bacteria | 58492 |
| 50 | Ga0395901_0058385 | 3300038443 | Bacteria | 4013 |
| 51 | Ga0400490_32580 | 3300038726 | Bacteria | 8431 |
| 52 | Ga0400489_81508 | 3300039093 | Unclassified | 2474 |
| 53 | Ga0400489_83951 | 3300039093 | Bacteria | 4509 |
| 54 | Ga0439431_0008054 | 3300041997 | Bacteria | 2362 |
| 55 | Ga0451577_0503197 | 3300042876 | Bacteria | 1100 |
| 56 | Ga0453683_0000118 | 3300044673 | Bacteria | 117158 |
| 57 | Ga0453683_0000401 | 3300044673 | Bacteria | 51183 |
| 58 | Ga0453683_0000530 | 3300044673 | Bacteria | 42738 |
| 59 | Ga0453683_0009078 | 3300044673 | Bacteria | 6640 |
| 60 | Ga0453683_0011778 | 3300044673 | Bacteria | 5758 |
| 61 | Ga0453683_0027559 | 3300044673 | Bacteria | 3602 |
| 62 | Ga0453683_0111763 | 3300044673 | Bacteria | 1718 |
| 63 | Ga0466964_0061631 | 3300044706 | Bacteria | 1562 |
| 64 | Ga0453684_0000133 | 3300044712 | Bacteria | 329529 |
| 65 | Ga0453684_0000558 | 3300044712 | Bacteria | 140560 |
| 66 | Ga0453684_0004045 | 3300044712 | Bacteria | 31879 |
| 67 | Ga0453684_0080822 | 3300044712 | Bacteria | 4057 |
| 68 | Ga0453684_0130064 | 3300044712 | Bacteria | 3022 |
| 69 | Ga0453684_0223912 | 3300044712 | Bacteria | 2177 |
| 70 | Ga0453684_0421209 | 3300044712 | Bacteria | 1491 |
| 71 | Ga0451576_0000001 | 3300045051 | Bacteria | 1802108 |
| 72 | Ga0451576_0000002 | 3300045051 | Bacteria | 1670975 |
| 73 | Ga0451576_0000097 | 3300045051 | Bacteria | 220569 |
| 74 | Ga0451576_0015448 | 3300045051 | Bacteria | 8456 |
| 75 | Ga0451576_0144490 | 3300045051 | Bacteria | 2480 |
| 76 | Ga0451576_0158233 | 3300045051 | Bacteria | 2363 |
| 77 | Ga0495628_0317578 | 3300046516 | Bacteria | 1150 |
| 78 | Ga0495630_0146907 | 3300046517 | Bacteria | 1793 |
| 79 | Ga0495640_0015796 | 3300046533 | Bacteria | 5666 |
| 80 | Ga0495604_0071983 | 3300047317 | Bacteria | 2614 |
| 81 | Ga0496108_0118551 | 3300048911 | Bacteria | 2269 |
| 82 | Ga0496114_0050121 | 3300048917 | Bacteria | 3475 |
| 83 | Ga0501036_0186681 | 3300049572 | Bacteria | 1745 |
| 84 | Ga0501040_0078720 | 3300049576 | Bacteria | 2281 |
| 85 | Ga0501041_0090480 | 3300049577 | Bacteria | 1889 |
| 86 | Ga0501042_0173404 | 3300049578 | Bacteria | 1556 |
| 87 | Ga0501071_0000638 | 3300049587 | Bacteria | 18217 |
| 88 | Ga0501071_0040911 | 3300049587 | Bacteria | 3318 |
| 89 | Ga0501075_0029305 | 3300049591 | Bacteria | 4070 |
| 90 | Ga0501075_0234231 | 3300049591 | Bacteria | 1400 |
| 91 | Ga0501076_0164762 | 3300049592 | Bacteria | 1806 |
| 92 | Ga0501079_0112061 | 3300049741 | Bacteria | 2120 |
| 93 | Ga0501080_0013392 | 3300049742 | Bacteria | 7543 |
| 94 | Ga0501081_0055666 | 3300049743 | Bacteria | 2733 |
| 95 | Ga0501081_0087423 | 3300049743 | Bacteria | 2189 |
| 96 | nmdc:mga0n895_40320_c1 | 3300050512 | Bacteria | 4535 |
| 97 | nmdc:mga08x19_9651_c1 | 3300050514 | Bacteria | 5779 |
| 98 | Ga0501084_0082289 | 3300054114 | Bacteria | 2701 |
| 99 | 2840679492 | 2840677318 | Bacteria | 2664183 |
| 100 | 2883069670 | 2883068021 | Bacteria | 6192739 |
| 101 | 2884796139 | 2884791551 | Bacteria | 8511252 |
| 102 | 2890807931 | 2890804823 | Bacteria | 3717572 |
| 103 | 2896087303 | 2896085136 | Bacteria | 6129793 |
| 104 | 2896114645 | 2896109856 | Bacteria | 7140722 |
| 105 | Ga0157372_10000855 | |||
| 106 | JGI24740J21852_10001807 | |||
| 107 | Ga0065704_10002380 | |||
| 108 | Ga0070670_100013945 | |||
| 109 | Ga0070680_100325541 | |||
| 110 | Ga0070713_100182315 | |||
| 111 | Ga0070678_100051320 | |||
| 112 | Ga0068857_100160537 | |||
| 113 | Ga0068856_100007477 | |||
| 114 | Ga0081538_10013722 | |||
| 115 | Ga0070716_100027051 | |||
| 116 | Ga0075434_100008610 | |||
| 117 | Ga0105240_10031042 | |||
| 118 | Ga0157371_10006538 | |||
| 119 | Ga0157371_10017511 | |||
| 120 | Ga0207660_10266117 | |||
| 121 | Ga0207662_10110395 | |||
| 122 | Ga0207650_10012391 | |||
| 123 | Ga0207664_10331587 | |||
| 124 | Ga0207665_10042472 | |||
| 125 | Ga0207667_10072777 | |||
| 126 | Ga0207702_10022393 | |||
| 127 | Ga0207674_10102806 | |||
| 128 | Ga0265327_10003330 | |||
| 129 | Ga0265327_10008181 | |||
| 130 | Ga0265327_10019516 | |||
| 131 | Ga0316579_10047243 | |||
| 132 | Ga0316576_10029710 | |||
| 133 | Ga0316576_10058006 | |||
| 134 | Ga0316576_10128100 | |||
| 135 | Ga0316576_10159700 | |||
| 136 | Ga0316578_10039678 | |||
| 137 | Ga0316578_10187618 | |||
| 138 | Ga0307416_100142941 | |||
| 139 | Ga0307411_10174907 | |||
| 140 | Ga0316585_10021134 | |||
| 141 | Ga0316580_10015990 | |||
| 142 | Ga0316593_10027165 | |||
| 143 | Ga0373927_0011131 | |||
| 144 | Ga0316582_0007607 | |||
| 145 | Ga0316582_0032612 | |||
| 146 | Ga0316584_0004906 | |||
| 147 | Ga0316584_0022826 | |||
| 148 | Ga0373925_0035728 | |||
| 149 | Ga0395899_0000021 | |||
| 150 | Ga0395899_0020570 | |||
| 151 | Ga0395899_0039959 | |||
| 152 | Ga0395905_0000001 | |||
| 153 | Ga0395905_0000433 | |||
| 154 | Ga0395901_0058385 | |||
| 155 | Ga0400490_32580 | |||
| 156 | Ga0400489_81508 | |||
| 157 | Ga0400489_83951 | |||
| 158 | Ga0439431_0008054 | |||
| 159 | Ga0451577_0503197 | |||
| 160 | Ga0453683_0000118 | |||
| 161 | Ga0453683_0000401 | |||
| 162 | Ga0453683_0000530 | |||
| 163 | Ga0453683_0009078 | |||
| 164 | Ga0453683_0011778 | |||
| 165 | Ga0453683_0027559 | |||
| 166 | Ga0453683_0111763 | |||
| 167 | Ga0466964_0061631 | |||
| 168 | Ga0453684_0000133 | |||
| 169 | Ga0453684_0000558 | |||
| 170 | Ga0453684_0004045 | |||
| 171 | Ga0453684_0080822 | |||
| 172 | Ga0453684_0130064 | |||
| 173 | Ga0453684_0223912 | |||
| 174 | Ga0453684_0421209 | |||
| 175 | Ga0451576_0000001 | |||
| 176 | Ga0451576_0000002 | |||
| 177 | Ga0451576_0000097 | |||
| 178 | Ga0451576_0015448 | |||
| 179 | Ga0451576_0144490 | |||
| 180 | Ga0451576_0158233 | |||
| 181 | Ga0495628_0317578 | |||
| 182 | Ga0495630_0146907 | |||
| 183 | Ga0495640_0015796 | |||
| 184 | Ga0495604_0071983 | |||
| 185 | Ga0496108_0118551 | |||
| 186 | Ga0496114_0050121 | |||
| 187 | Ga0501036_0186681 | |||
| 188 | Ga0501040_0078720 | |||
| 189 | Ga0501041_0090480 | |||
| 190 | Ga0501042_0173404 | |||
| 191 | Ga0501071_0000638 | |||
| 192 | Ga0501071_0040911 | |||
| 193 | Ga0501075_0029305 | |||
| 194 | Ga0501075_0234231 | |||
| 195 | Ga0501076_0164762 | |||
| 196 | Ga0501079_0112061 | |||
| 197 | Ga0501080_0013392 | |||
| 198 | Ga0501081_0055666 | |||
| 199 | Ga0501081_0087423 | |||
| 200 | nmdc:mga0n895_40320_c1 | |||
| 201 | nmdc:mga08x19_9651_c1 | |||
| 202 | Ga0501084_0082289 | |||
| 203 | 2840679492 | |||
| 204 | 2883069670 | |||
| 205 | 2884796139 | |||
| 206 | 2890807931 | |||
| 207 | 2896087303 | |||
| 208 | 2896114645 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1php-assembly1.cif.gz_A | structure of the adp complex of the 3-phosphoglycerate kinase from bacillus stearothermophilus at 1.65 angstroms | 0.9857 | 3 | 395 |
| 3uwd-assembly1.cif.gz_A | crystal structure of phosphoglycerate kinase from bacillus anthracis | 0.9822 | 2 | 395 |
| 7zy7-assembly2.cif.gz_B | crystal structure of chlamydomonas reinhardtii chloroplastic phosphoglycerate kinase | 0.9697 | 9 | 395 |
| 1vjd-assembly1.cif.gz_A | structure of pig muscle pgk complexed with atp | 0.9638 | 5 | 395 |
| 1php-assembly1.cif.gz_A | structure of the adp complex of the 3-phosphoglycerate kinase from bacillus stearothermophilus at 1.65 angstroms | 0.9634 | 3 | 395 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A0P0V994_190_315_3.40.50.1260 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain | 0.9931 | 189 | 312 | 3.40.50.1260 |
| af_A0A1D6FSN1_4_156_3.40.50.1260 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain | 0.9893 | 228 | 378 | 3.40.50.1260 |
| af_A0A1D6FSN1_1_174_3.40.50.1260 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain | 0.987 | 224 | 395 | 3.40.50.1260 |
| af_P9WID1_191_392_3.40.50.1260 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain | 0.9852 | 184 | 385 | 3.40.50.1260 |
| 1hdiA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphoglycerate kinase, N-terminal domain | 0.9806 | 181 | 385 | 3.40.50.1260 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-X1G9G5-F1-model_v4 | phosphoglycerate kinase (EC 2.7.2.3) | 1.001 | 213 | 338 |
GO:0004618
GO:0005524 GO:0005829 GO:0006094 GO:0006096 GO:0043531 |
| AF-A0A7V4N247-F1-model_v4 | phosphoglycerate kinase (EC 2.7.2.3) | 0.998 | 200 | 398 |
GO:0004618
GO:0005524 GO:0005829 GO:0006094 GO:0006096 GO:0043531 |
| AF-A0A4Y7U4Q9-F1-model_v4 | phosphoglycerate kinase (EC 2.7.2.3) | 0.997 | 222 | 358 |
GO:0004618
GO:0005524 GO:0005829 GO:0006094 GO:0006096 GO:0043531 |
| AF-A0A519SW21-F1-model_v4 | Phosphoglycerate kinase (EC 2.7.2.3) | 0.9968 | 294 | 396 |
GO:0004618
GO:0005524 GO:0005829 GO:0006094 GO:0006096 GO:0043531 |
| AF-A0A800AXA9-F1-model_v4 | Phosphoglycerate kinase (EC 2.7.2.3) | 0.9965 | 296 | 395 |
GO:0004618
GO:0005524 GO:0005829 GO:0006094 GO:0006096 GO:0043531 |