F032869

General Info

Members Datasets Scaffolds Average Seq Length
105 79 97 420

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10004696|Ga0265338_1000469615
Length 455
Sequence MSGTLDLAGGKLHLYKRENSDVWQCSAYMAGKNRRVSTKERDLERAKAAAEEWYFGLRVKKRTGELVGGPTFAQAAAKFLPEYEILTAGERSPKYVQTLKDKLRVHLLPFFGKTPVSLIGPQMAQDYRVHRKTKPKEAEAREAEAKLKGKEYKPKKPWTPPANVTLKHEIVTLRLVLKTAQRLGWIGHVPDLSPPYRGSGKISHRAWFSLEEYNELCRVTRDRAKNPPKPRWKWECEQLNNFVVFMVNTGLRPDEAARLEFRDVEIVADKATGETILEISVRGKRGVGYCKSMPGAVYPFEQLSKRPRAKDPKSRQSKGGASVLQNGSQVAVNPDLVLPGPTDLLFPGLRSHHLNAVLDEMGLKFDREANRRSAYSLRHTYICLRLMEGADIYQIAKNCRTSVEMIEKFYAAHIKNTIDAAAVNVRRPDGPPSKAKANAKRPSAASKGGYPPRRR

Samples

Sample ID Description Type Environment
1 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
2 2643221583 Caulobacter sp. Root655 Isolate Unclassified
3 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
4 2893066018 Tardiphaga sp. P9-11 Isolate Unclassified
5 2935760218 Bradyrhizobium sp. LA7.1 Isolate Nodule
6 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
17 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
18 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
19 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
20 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
21 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
22 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
23 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
24 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
26 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
40 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
41 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
42 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
43 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
47 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
48 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
49 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
50 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
51 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
52 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
53 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
54 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
55 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
56 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
57 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
58 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
59 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
60 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
61 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
62 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
63 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
64 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
65 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
66 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
67 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
68 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
69 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
70 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
71 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
72 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
73 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
74 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
75 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
76 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
77 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
78 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
79 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.38
Metatranscriptomes 0
Isolates 7.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.29
Nodule 3.81
Rhizoplane 0.95
Rhizosphere 65.71
Stem 0
Stem Tuber 0
Unclassified 15.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10054327 3300003320 Bacteria 5832
2 rootH2_10056697 3300003320 Bacteria 4067
3 rootH1_10024212 3300003323 Bacteria 7612
4 Ga0055540_1000718 3300003792 Bacteria 22578
5 Ga0055531_10000385 3300003794 Bacteria 42696
6 Ga0070661_100039367 3300005344 Bacteria 3445
7 Ga0070667_100001410 3300005367 Bacteria 21500
8 Ga0070711_100022935 3300005439 Bacteria 4053
9 Ga0070711_100256392 3300005439 Bacteria 1374
10 Ga0068853_100000263 3300005539 Bacteria 37029
11 Ga0068853_100063542 3300005539 Bacteria 3198
12 Ga0081455_10004086 3300005937 Bacteria 16518
13 Ga0105240_10001131 3300009093 Bacteria 46708
14 Ga0105241_10214798 3300009174 Bacteria 1613
15 Ga0105248_10000793 3300009177 Bacteria 35462
16 Ga0105248_10000914 3300009177 Bacteria 32840
17 Ga0105248_10101041 3300009177 Bacteria 3250
18 Ga0105239_10001150 3300010375 Bacteria 36437
19 Ga0157370_10151127 3300013104 Bacteria 2160
20 Ga0157370_10184779 3300013104 Bacteria 1936
21 Ga0183365_10006 3300015684 Bacteria 225936
22 Ga0183365_10008 3300015684 Bacteria 74681
23 Ga0213873_10000019 3300021358 Bacteria 122085
24 Ga0213876_10000075 3300021384 Bacteria 120068
25 Ga0209050_1004635 3300025298 Bacteria 9171
26 Ga0209256_1015524 3300025299 Bacteria 2656
27 Ga0209051_1000352 3300025303 Bacteria 68420
28 Ga0209257_1000895 3300025304 Bacteria 41863
29 Ga0207695_10000231 3300025913 Bacteria 148736
30 Ga0207663_10002589 3300025916 Bacteria 8699
31 Ga0207657_10139835 3300025919 Bacteria 1979
32 Ga0207649_10060641 3300025920 Bacteria 2378
33 Ga0207711_10002388 3300025941 Bacteria 16792
34 Ga0207658_10000300 3300025986 Bacteria 51413
35 Ga0207639_10000036 3300026041 Bacteria 148421
36 Ga0207639_10083978 3300026041 Bacteria 2529
37 Ga0207678_10306307 3300026067 Bacteria 1366
38 Ga0209588_1000225 3300027671 Bacteria 15190
39 Ga0265336_10002382 3300028666 Bacteria 7790
40 Ga0265338_10004696 3300028800 Bacteria 18306
41 Ga0265332_10000804 3300031238 Bacteria 19078
42 Ga0265328_10004256 3300031239 Bacteria 6227
43 Ga0265340_10010434 3300031247 Bacteria 4969
44 Ga0265339_10000003 3300031249 Bacteria 305994
45 Ga0265339_10001193 3300031249 Bacteria 19613
46 Ga0265339_10109417 3300031249 Bacteria 1431
47 Ga0265331_10000204 3300031250 Bacteria 71854
48 Ga0265327_10001235 3300031251 Bacteria 34299
49 Ga0265327_10031214 3300031251 Bacteria 2997
50 Ga0265316_10003345 3300031344 Bacteria 16257
51 Ga0265316_10142099 3300031344 Bacteria 1802
52 Ga0265313_10018747 3300031595 Bacteria 3876
53 Ga0265313_10024570 3300031595 Bacteria 3215
54 Ga0265314_10000421 3300031711 Bacteria 56992
55 Ga0265342_10007870 3300031712 Bacteria 7736
56 Ga0307516_10016998 3300031730 Bacteria 7597
57 Ga0307516_10040872 3300031730 Bacteria 4612
58 Ga0307516_10153801 3300031730 Bacteria 2058
59 Ga0373937_0000253 3300036401 Bacteria 51834
60 Ga0436365_0757597 3300039437 Bacteria 1424
61 Ga0436365_0863570 3300039437 Bacteria 121422
62 Ga0436362_0592983 3300039453 Bacteria 296966
63 Ga0495627_000935 3300046453 Bacteria 20131
64 Ga0495627_010512 3300046453 Bacteria 3360
65 Ga0495627_027881 3300046453 Bacteria 1807
66 Ga0495650_0002356 3300046471 Bacteria 15575
67 Ga0495650_0002947 3300046471 Bacteria 12891
68 Ga0495650_0020430 3300046471 Bacteria 3229
69 Ga0495610_0003449 3300046512 Bacteria 12311
70 Ga0495620_0000244 3300046515 Bacteria 40627
71 Ga0495620_0008875 3300046515 Bacteria 5375
72 Ga0495620_0052919 3300046515 Bacteria 1721
73 Ga0495643_0006731 3300046522 Bacteria 7522
74 Ga0495643_0025205 3300046522 Bacteria 3367
75 Ga0495642_0016111 3300046528 Bacteria 2911
76 Ga0495625_0000221 3300046660 Bacteria 90175
77 Ga0495625_0034548 3300046660 Bacteria 3730
78 Ga0495669_0000078 3300046684 Bacteria 64436
79 Ga0495669_0067779 3300046684 Bacteria 1622
80 Ga0495670_0027533 3300046691 Bacteria 2817
81 Ga0495672_0097585 3300047320 Bacteria 1600
82 Ga0495681_0035820 3300047470 Bacteria 2461
83 Ga0495686_0013891 3300047472 Bacteria 5573
84 Ga0495615_0000022 3300048090 Bacteria 51294
85 Ga0496112_0000016 3300048915 Bacteria 194634
86 Ga0496122_0006711 3300048925 Bacteria 13095
87 Ga0496123_0009552 3300048926 Bacteria 8719
88 Ga0501067_0011325 3300049583 Bacteria 4939
89 Ga0500556_0016482 3300053104 Bacteria 2298
90 Ga0500595_001689 3300053119 Bacteria 11591
91 Ga0500607_067270 3300053121 Bacteria 1857
92 Ga0500614_000027 3300053123 Bacteria 34867
93 Ga0500642_0000003 3300053130 Bacteria 544899
94 Ga0500642_0007047 3300053130 Bacteria 3750
95 Ga0500616_0005725 3300053153 Bacteria 8364
96 Ga0500636_0000037 3300053177 Bacteria 70883
97 Ga0500661_007859 3300055283 Bacteria 1967

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053130 Ga0500642_0000003 Ga0500642_0000003_487529_488662 375
2 3300053153 Ga0500616_0005725 Ga0500616_0005725_6534_7700 375
3 3300003323 rootH1_10024212 rootH1_100242126 379
4 3300046522 Ga0495643_0025205 Ga0495643_0025205_1248_2474 379
5 3300009174 Ga0105241_10214798 Ga0105241_102147981 380
6 3300015684 Ga0183365_10008 Ga0183365_1000831 380
7 3300046515 Ga0495620_0000244 Ga0495620_0000244_894_2117 380
8 iso_pu_bacteria 2935760218 2935766987 380
9 3300005539 Ga0068853_100063542 Ga0068853_1000635422 382
10 3300026041 Ga0207639_10083978 Ga0207639_100839782 382
11 3300047470 Ga0495681_0035820 Ga0495681_0035820_33_1307 382
12 3300031730 Ga0307516_10016998 Ga0307516_100169987 383
13 3300046691 Ga0495670_0027533 Ga0495670_0027533_179_1438 383
14 3300047320 Ga0495672_0097585 Ga0495672_0097585_146_1411 383
15 iso_pu_bacteria 2854896431 2854898987 383
16 iso_pu_bacteria 2893066018 2893066559 383
17 3300031249 Ga0265339_10001193 Ga0265339_1000119318 384
18 3300031730 Ga0307516_10040872 Ga0307516_100408724 384
19 3300049583 Ga0501067_0011325 Ga0501067_0011325_2277_3539 384
20 3300053130 Ga0500642_0007047 Ga0500642_0007047_1754_3004 384
21 iso_pu_bacteria 8023680758 8023682077 384
22 3300005344 Ga0070661_100039367 Ga0070661_1000393672 385
23 3300025920 Ga0207649_10060641 Ga0207649_100606413 385
24 iso_pu_bacteria 2643221583 2643925335 385
25 3300053121 Ga0500607_067270 Ga0500607_067270_368_1654 386
26 3300053123 Ga0500614_000027 Ga0500614_000027_33325_34611 386
27 iso_pu_bacteria 8006994254 8007001281 386
28 3300013104 Ga0157370_10151127 Ga0157370_101511272 387
29 3300025299 Ga0209256_1015524 Ga0209256_10155241 387
30 3300027671 Ga0209588_1000225 Ga0209588_10002252 387
31 iso_pu_bacteria 2585427531 2585558143 387
32 3300003792 Ga0055540_1000718 Ga0055540_100071828 388
33 3300003794 Ga0055531_10000385 Ga0055531_1000038545 388
34 3300025298 Ga0209050_1004635 Ga0209050_10046357 388
35 3300025303 Ga0209051_1000352 Ga0209051_10003522 388
36 3300025304 Ga0209257_1000895 Ga0209257_100089539 388
37 3300021358 Ga0213873_10000019 Ga0213873_1000001925 389
38 3300021384 Ga0213876_10000075 Ga0213876_1000007522 389
39 3300039437 Ga0436365_0757597 Ga0436365_0757597_88_1284 389
40 3300039437 Ga0436365_0863570 Ga0436365_0863570_118546_119718 389
41 3300039453 Ga0436362_0592983 Ga0436362_0592983_117136_118308 389
42 3300005439 Ga0070711_100256392 Ga0070711_1002563921 390
43 3300005539 Ga0068853_100000263 Ga0068853_1000002639 390
44 3300009093 Ga0105240_10001131 Ga0105240_1000113129 390
45 3300009177 Ga0105248_10000914 Ga0105248_100009143 390
46 3300009177 Ga0105248_10101041 Ga0105248_101010412 390
47 3300013104 Ga0157370_10184779 Ga0157370_101847791 390
48 3300015684 Ga0183365_10006 Ga0183365_1000656 390
49 3300025913 Ga0207695_10000231 Ga0207695_1000023166 390
50 3300026041 Ga0207639_10000036 Ga0207639_100000368 390
51 3300036401 Ga0373937_0000253 Ga0373937_0000253_33639_34880 390
52 3300047472 Ga0495686_0013891 Ga0495686_0013891_2005_3282 390
53 3300005439 Ga0070711_100022935 Ga0070711_1000229352 391
54 3300025916 Ga0207663_10002589 Ga0207663_100025891 391
55 3300025919 Ga0207657_10139835 Ga0207657_101398351 391
56 3300026067 Ga0207678_10306307 Ga0207678_103063071 391
57 3300028666 Ga0265336_10002382 Ga0265336_100023822 391
58 3300031238 Ga0265332_10000804 Ga0265332_1000080411 391
59 3300031239 Ga0265328_10004256 Ga0265328_100042562 391
60 3300031249 Ga0265339_10109417 Ga0265339_101094171 391
61 3300031250 Ga0265331_10000204 Ga0265331_1000020443 391
62 3300031251 Ga0265327_10031214 Ga0265327_100312142 391
63 3300031344 Ga0265316_10003345 Ga0265316_100033457 391
64 3300031595 Ga0265313_10024570 Ga0265313_100245703 391
65 3300031711 Ga0265314_10000421 Ga0265314_1000042122 391
66 3300031712 Ga0265342_10007870 Ga0265342_100078707 391
67 3300046453 Ga0495627_000935 Ga0495627_000935_18539_19858 391
68 3300046453 Ga0495627_010512 Ga0495627_010512_96_1415 391
69 3300046453 Ga0495627_027881 Ga0495627_027881_260_1579 391
70 3300046471 Ga0495650_0002947 Ga0495650_0002947_11022_12305 391
71 3300046471 Ga0495650_0020430 Ga0495650_0020430_835_2154 391
72 3300046512 Ga0495610_0003449 Ga0495610_0003449_275_1594 391
73 3300046515 Ga0495620_0008875 Ga0495620_0008875_3602_4921 391
74 3300046515 Ga0495620_0052919 Ga0495620_0052919_330_1649 391
75 3300046522 Ga0495643_0006731 Ga0495643_0006731_273_1592 391
76 3300046660 Ga0495625_0034548 Ga0495625_0034548_265_1584 391
77 3300048925 Ga0496122_0006711 Ga0496122_0006711_11011_12330 391
78 3300048926 Ga0496123_0009552 Ga0496123_0009552_869_2188 391
79 3300053104 Ga0500556_0016482 Ga0500556_0016482_853_2118 391
80 3300010375 Ga0105239_10001150 Ga0105239_1000115027 392
81 3300028800 Ga0265338_10004696 Ga0265338_1000469615 392
82 3300031247 Ga0265340_10010434 Ga0265340_100104342 392
83 3300031251 Ga0265327_10001235 Ga0265327_1000123516 392
84 3300031595 Ga0265313_10018747 Ga0265313_100187472 392
85 3300048915 Ga0496112_0000016 Ga0496112_0000016_136371_137567 392
86 3300046684 Ga0495669_0067779 Ga0495669_0067779_322_1578 393
87 3300048090 Ga0495615_0000022 Ga0495615_0000022_64_1428 393
88 3300031249 Ga0265339_10000003 Ga0265339_1000000352 394
89 3300031344 Ga0265316_10142099 Ga0265316_101420992 394
90 3300003320 rootH2_10056697 rootH2_100566971 395
91 3300031730 Ga0307516_10153801 Ga0307516_101538012 395
92 3300055283 Ga0500661_007859 Ga0500661_007859_567_1835 395
93 3300005937 Ga0081455_10004086 Ga0081455_1000408612 397
94 3300046528 Ga0495642_0016111 Ga0495642_0016111_428_1741 397
95 3300046684 Ga0495669_0000078 Ga0495669_0000078_10790_12103 397
96 3300053177 Ga0500636_0000037 Ga0500636_0000037_1240_2583 397
97 3300053119 Ga0500595_001689 Ga0500595_001689_9939_11261 398
98 iso_pu_bacteria 2941531003 2941537926 398
99 3300009177 Ga0105248_10000793 Ga0105248_1000079331 410
100 3300025941 Ga0207711_10002388 Ga0207711_1000238816 410
101 3300005367 Ga0070667_100001410 Ga0070667_10000141024 415
102 3300025986 Ga0207658_10000300 Ga0207658_100003002 415
103 3300046471 Ga0495650_0002356 Ga0495650_0002356_10557_11834 420
104 3300046660 Ga0495625_0000221 Ga0495625_0000221_22363_23649 423
105 3300003320 rootH2_10054327 rootH2_100543275 433

Structural Annotation

Top 5 Hits

ID Description Score Start End
2kd1-assembly1.cif.gz_A solution nmr structure of the integrase-like domain from bacillus cereus ordered locus bc_1272. northeast structural genomics consortium target bcr268f 0.8701 105 212
3lys-assembly6.cif.gz_F crystal structure of the n-terminal domain of the prophage pi2 protein 01 (integrase) from lactococcus lactis, northeast structural genomics consortium target kr124f 0.7967 106 216
2pma-assembly2.cif.gz_B structural genomics, the crystal structure of a protein lpg0085 with unknown function (duf785) from legionella pneumophila subsp. pneumophila str. philadelphia 1. 0.7706 287 315
3soq-assembly1.cif.gz_A the structure of the first ywtd beta propeller domain of lrp6 in complex with a dkk1 peptide 0.7623 3 39
2kj8-assembly1.cif.gz_A nmr structure of fragment 87-196 from the putative phage integrase ints of e. coli: northeast structural genomics consortium target er652a, psi-2 0.7469 110 212
ID Description Score Start End Superfamily
af_P32053_96_209_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9127 110 214 1.10.150.130
2kobA01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.882 110 212 1.10.150.130
2kd1A00 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.8701 105 212 1.10.150.130
af_P76542_102_208_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.8241 107 222 1.10.150.130
af_Q9W351_230_466_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8234 5 41 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A2M7LED7-F1-model_v4 deleted 0.9636 2 54
AF-A0A2M7LED7-F1-model_v4 deleted 0.9464 2 54
AF-A0A6A7KT64-F1-model_v4 Uncharacterized protein 0.9416 4 61
AF-A0A0P8BJD0-F1-model_v4 Uncharacterized protein 0.9276 2 57
AF-A0A439MT49-F1-model_v4 deleted 0.924 3 60

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pLDDT pTM Quality
82.44 0.52 Medium
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Predicted Structure (AlphaFold2)

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