F033240
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 105 | 79 | 105 | 204 |
Family's Representative Sequence
| Representative Sequence | 3300035118|Ga0373954_0113903|Ga0373954_0113903_38_652 |
| Length | 189 |
| Sequence | MIPSVIVFDLGKVLVDFDYSIASRRIAARSKLKVDEARFFTEQADLLFNYEVGRIGTQKFFEEIRKVSGFAGTAEEFSLHVAVRRKHIPLYIFSNTNDLAITHIRRSYPFFGEFDGYILSYEHGAMKPDAKLYEVVERETKRKRGEILYLDDRPENIAVGEARGWQTVLHESPEKTRAAFTRLGVLNHD |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 2 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 3 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 4 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 5 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 6 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 12 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 15 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 16 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 17 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 18 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 19 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 21 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 22 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 23 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 25 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 40 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 42 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 43 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 44 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 45 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 46 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 47 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 48 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 49 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 50 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 51 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 52 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 53 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 54 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 55 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 56 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 57 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 58 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 59 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 75 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 76 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 77 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 78 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 79 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 100 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070683_100219871 | 3300005329 | Unclassified | 1805 |
| 2 | Ga0070690_100079117 | 3300005330 | Unclassified | 2149 |
| 3 | Ga0068869_100124125 | 3300005334 | Bacteria | 1978 |
| 4 | Ga0068868_100424112 | 3300005338 | Bacteria | 1152 |
| 5 | Ga0070689_100050091 | 3300005340 | Bacteria | 3226 |
| 6 | Ga0070689_100060991 | 3300005340 | Bacteria | 2933 |
| 7 | Ga0070689_100862807 | 3300005340 | Unclassified | 799 |
| 8 | Ga0070673_100606239 | 3300005364 | Unclassified | 999 |
| 9 | Ga0070713_100770459 | 3300005436 | Unclassified | 921 |
| 10 | Ga0070708_100553489 | 3300005445 | Bacteria | 1085 |
| 11 | Ga0070681_10846986 | 3300005458 | Unclassified | 832 |
| 12 | Ga0070685_10202758 | 3300005466 | Unclassified | 1290 |
| 13 | Ga0070684_100327358 | 3300005535 | Unclassified | 1408 |
| 14 | Ga0070686_100604791 | 3300005544 | Unclassified | 864 |
| 15 | Ga0070704_100363355 | 3300005549 | Unclassified | 1225 |
| 16 | Ga0068855_100030689 | 3300005563 | Bacteria | 6426 |
| 17 | Ga0068857_100007957 | 3300005577 | Bacteria | 9151 |
| 18 | Ga0068856_100199578 | 3300005614 | Bacteria | 2015 |
| 19 | Ga0068859_100012223 | 3300005617 | Bacteria | 8633 |
| 20 | Ga0068858_100060095 | 3300005842 | Bacteria | 3513 |
| 21 | Ga0070712_100263041 | 3300006175 | Bacteria | 1383 |
| 22 | Ga0068871_100086962 | 3300006358 | Unclassified | 2598 |
| 23 | Ga0068871_100298718 | 3300006358 | Unclassified | 1413 |
| 24 | Ga0075428_100046745 | 3300006844 | Bacteria | 4754 |
| 25 | Ga0075428_100067089 | 3300006844 | Bacteria | 3928 |
| 26 | Ga0075430_100068142 | 3300006846 | Unclassified | 2986 |
| 27 | Ga0075430_100481464 | 3300006846 | Unclassified | 1024 |
| 28 | Ga0097620_100012223 | 3300006931 | Bacteria | 8633 |
| 29 | Ga0075435_100354518 | 3300007076 | Bacteria | 1258 |
| 30 | Ga0105240_10002096 | 3300009093 | Bacteria | 32628 |
| 31 | Ga0105240_10215382 | 3300009093 | Unclassified | 2241 |
| 32 | Ga0111539_10028159 | 3300009094 | Bacteria | 6859 |
| 33 | Ga0105245_10739688 | 3300009098 | Unclassified | 1019 |
| 34 | Ga0157375_10000094 | 3300013308 | Bacteria | 88991 |
| 35 | Ga0163163_10803591 | 3300014325 | Bacteria | 1004 |
| 36 | Ga0157376_10678205 | 3300014969 | Unclassified | 1034 |
| 37 | Ga0207680_10051141 | 3300025903 | Bacteria | 2470 |
| 38 | Ga0207694_10011087 | 3300025924 | Bacteria | 6807 |
| 39 | Ga0207687_10207402 | 3300025927 | Bacteria | 1535 |
| 40 | Ga0207670_10215526 | 3300025936 | Bacteria | 1466 |
| 41 | Ga0207667_10274342 | 3300025949 | Bacteria | 1724 |
| 42 | Ga0207703_10017209 | 3300026035 | Bacteria | 5641 |
| 43 | Ga0207702_10286196 | 3300026078 | Unclassified | 1560 |
| 44 | Ga0207674_10013135 | 3300026116 | Bacteria | 9217 |
| 45 | Ga0207428_10100972 | 3300027907 | Bacteria | 2229 |
| 46 | Ga0268264_11329507 | 3300028381 | Unclassified | 729 |
| 47 | Ga0265337_1000415 | 3300028556 | Bacteria | 22788 |
| 48 | Ga0265337_1062645 | 3300028556 | Bacteria | 1028 |
| 49 | Ga0265334_10098397 | 3300028573 | Unclassified | 1061 |
| 50 | Ga0265334_10112177 | 3300028573 | Unclassified | 980 |
| 51 | Ga0265318_10119565 | 3300028577 | Viruses | 969 |
| 52 | Ga0265336_10016666 | 3300028666 | Bacteria | 2402 |
| 53 | Ga0265336_10065344 | 3300028666 | Bacteria | 1089 |
| 54 | Ga0265338_10018738 | 3300028800 | Bacteria | 7390 |
| 55 | Ga0265338_10036242 | 3300028800 | Bacteria | 4725 |
| 56 | Ga0265338_10132684 | 3300028800 | Bacteria | 1963 |
| 57 | Ga0265324_10083923 | 3300029957 | Unclassified | 1084 |
| 58 | Ga0265324_10158908 | 3300029957 | Bacteria | 767 |
| 59 | Ga0265327_10000699 | 3300031251 | Bacteria | 53339 |
| 60 | Ga0265316_10171571 | 3300031344 | Bacteria | 1618 |
| 61 | Ga0265314_10146771 | 3300031711 | Viruses | 1452 |
| 62 | Ga0316576_10165282 | 3300031727 | Unclassified | 1670 |
| 63 | Ga0316578_10140780 | 3300031728 | Bacteria | 1453 |
| 64 | Ga0373953_0070582 | 3300035117 | Bacteria | 1441 |
| 65 | Ga0373954_0113903 | 3300035118 | Bacteria | 1309 |
| 66 | Ga0373933_0144464 | 3300035724 | Bacteria | 1504 |
| 67 | Ga0373933_0257961 | 3300035724 | Bacteria | 1124 |
| 68 | Ga0316584_0101199 | 3300036712 | Unclassified | 2158 |
| 69 | Ga0451577_0295007 | 3300042876 | Unclassified | 1469 |
| 70 | Ga0453684_0270357 | 3300044712 | Bacteria | 1943 |
| 71 | Ga0453684_1269899 | 3300044712 | Unclassified | 770 |
| 72 | Ga0451576_0071771 | 3300045051 | Bacteria | 3604 |
| 73 | Ga0451576_0097175 | 3300045051 | Unclassified | 3063 |
| 74 | Ga0451576_0594497 | 3300045051 | Unclassified | 1163 |
| 75 | Ga0451576_0702642 | 3300045051 | Bacteria | 1062 |
| 76 | Ga0495592_0109800 | 3300046454 | Bacteria | 1953 |
| 77 | Ga0495664_0064417 | 3300046477 | Bacteria | 2185 |
| 78 | Ga0495608_0405821 | 3300046511 | Bacteria | 833 |
| 79 | Ga0495608_0446316 | 3300046511 | Bacteria | 787 |
| 80 | Ga0495628_0075539 | 3300046516 | Unclassified | 2624 |
| 81 | Ga0495628_0210945 | 3300046516 | Bacteria | 1461 |
| 82 | Ga0495630_0173478 | 3300046517 | Unclassified | 1643 |
| 83 | Ga0495630_0265720 | 3300046517 | Unclassified | 1311 |
| 84 | Ga0495652_0197515 | 3300046529 | Bacteria | 1529 |
| 85 | Ga0495640_0156267 | 3300046533 | Bacteria | 1464 |
| 86 | Ga0495640_0460276 | 3300046533 | Unclassified | 776 |
| 87 | Ga0495587_0126931 | 3300046536 | Bacteria | 1459 |
| 88 | Ga0495587_0156450 | 3300046536 | Bacteria | 1298 |
| 89 | Ga0495645_0187924 | 3300046543 | Bacteria | 1410 |
| 90 | Ga0495645_0360865 | 3300046543 | Bacteria | 934 |
| 91 | Ga0495634_0125088 | 3300046642 | Bacteria | 1644 |
| 92 | Ga0495635_0442519 | 3300046663 | Bacteria | 860 |
| 93 | Ga0495613_0136995 | 3300046689 | Bacteria | 1751 |
| 94 | Ga0495613_0310706 | 3300046689 | Bacteria | 1090 |
| 95 | Ga0495674_0151369 | 3300047319 | Unclassified | 1945 |
| 96 | Ga0495674_0209043 | 3300047319 | Unclassified | 1617 |
| 97 | Ga0495675_0110131 | 3300047444 | Unclassified | 1719 |
| 98 | Ga0495675_0255536 | 3300047444 | Bacteria | 1051 |
| 99 | Ga0495602_0295259 | 3300048088 | Bacteria | 1188 |
| 100 | Ga0501033_0059584 | 3300049570 | Bacteria | 2819 |
| 101 | Ga0501043_0280561 | 3300049579 | Bacteria | 1277 |
| 102 | Ga0501044_0009659 | 3300049823 | Bacteria | 10495 |
| 103 | nmdc:mga0qj67_42410_c1 | 3300050509 | Bacteria | 3581 |
| 104 | nmdc:mga08y16_59832_c1 | 3300050511 | Bacteria | 3979 |
| 105 | nmdc:mga0a205_283973_c2 | 3300050515 | Unclassified | 902 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300035117 | Ga0373953_0070582 | Ga0373953_0070582_106_720 | 189 |
| 2 | 3300035118 | Ga0373954_0113903 | Ga0373954_0113903_38_652 | 189 |
| 3 | 3300035724 | Ga0373933_0144464 | Ga0373933_0144464_628_1242 | 189 |
| 4 | 3300046511 | Ga0495608_0405821 | Ga0495608_0405821_109_723 | 189 |
| 5 | 3300046689 | Ga0495613_0310706 | Ga0495613_0310706_355_969 | 189 |
| 6 | 3300047319 | Ga0495674_0209043 | Ga0495674_0209043_10_597 | 195 |
| 7 | 3300028573 | Ga0265334_10112177 | Ga0265334_101121772 | 197 |
| 8 | 3300028666 | Ga0265336_10016666 | Ga0265336_100166664 | 197 |
| 9 | 3300029957 | Ga0265324_10083923 | Ga0265324_100839232 | 197 |
| 10 | 3300005340 | Ga0070689_100050091 | Ga0070689_1000500911 | 199 |
| 11 | 3300028381 | Ga0268264_11329507 | Ga0268264_113295071 | 199 |
| 12 | 3300045051 | Ga0451576_0594497 | Ga0451576_0594497_77_676 | 199 |
| 13 | 3300005364 | Ga0070673_100606239 | Ga0070673_1006062392 | 200 |
| 14 | 3300005563 | Ga0068855_100030689 | Ga0068855_1000306892 | 200 |
| 15 | 3300005617 | Ga0068859_100012223 | Ga0068859_1000122234 | 200 |
| 16 | 3300005842 | Ga0068858_100060095 | Ga0068858_1000600954 | 200 |
| 17 | 3300006844 | Ga0075428_100046745 | Ga0075428_1000467456 | 200 |
| 18 | 3300006846 | Ga0075430_100068142 | Ga0075430_1000681424 | 200 |
| 19 | 3300006846 | Ga0075430_100481464 | Ga0075430_1004814642 | 200 |
| 20 | 3300006931 | Ga0097620_100012223 | Ga0097620_1000122234 | 200 |
| 21 | 3300025949 | Ga0207667_10274342 | Ga0207667_102743423 | 200 |
| 22 | 3300026035 | Ga0207703_10017209 | Ga0207703_100172096 | 200 |
| 23 | 3300028556 | Ga0265337_1000415 | Ga0265337_100041515 | 200 |
| 24 | 3300031251 | Ga0265327_10000699 | Ga0265327_1000069927 | 200 |
| 25 | 3300035724 | Ga0373933_0257961 | Ga0373933_0257961_68_670 | 200 |
| 26 | 3300045051 | Ga0451576_0071771 | Ga0451576_0071771_1233_1841 | 200 |
| 27 | 3300046516 | Ga0495628_0210945 | Ga0495628_0210945_637_1239 | 200 |
| 28 | 3300050509 | nmdc:mga0qj67_42410_c1 | nmdc:mga0qj67_42410_c1_2693_3298 | 200 |
| 29 | 3300050515 | nmdc:mga0a205_283973_c2 | nmdc:mga0a205_283973_c2_209_814 | 200 |
| 30 | 3300005330 | Ga0070690_100079117 | Ga0070690_1000791172 | 201 |
| 31 | 3300006844 | Ga0075428_100067089 | Ga0075428_1000670893 | 201 |
| 32 | 3300009094 | Ga0111539_10028159 | Ga0111539_100281597 | 201 |
| 33 | 3300014325 | Ga0163163_10803591 | Ga0163163_108035912 | 201 |
| 34 | 3300014969 | Ga0157376_10678205 | Ga0157376_106782052 | 201 |
| 35 | 3300027907 | Ga0207428_10100972 | Ga0207428_101009723 | 201 |
| 36 | 3300028556 | Ga0265337_1062645 | Ga0265337_10626452 | 201 |
| 37 | 3300050511 | nmdc:mga08y16_59832_c1 | nmdc:mga08y16_59832_c1_1280_1888 | 201 |
| 38 | 3300005334 | Ga0068869_100124125 | Ga0068869_1001241252 | 202 |
| 39 | 3300005338 | Ga0068868_100424112 | Ga0068868_1004241122 | 202 |
| 40 | 3300005436 | Ga0070713_100770459 | Ga0070713_1007704591 | 202 |
| 41 | 3300006358 | Ga0068871_100086962 | Ga0068871_1000869624 | 202 |
| 42 | 3300009098 | Ga0105245_10739688 | Ga0105245_107396882 | 202 |
| 43 | 3300025924 | Ga0207694_10011087 | Ga0207694_100110877 | 202 |
| 44 | 3300025927 | Ga0207687_10207402 | Ga0207687_102074022 | 202 |
| 45 | 3300028577 | Ga0265318_10119565 | Ga0265318_101195652 | 202 |
| 46 | 3300028800 | Ga0265338_10018738 | Ga0265338_100187384 | 202 |
| 47 | 3300028800 | Ga0265338_10036242 | Ga0265338_100362424 | 202 |
| 48 | 3300029957 | Ga0265324_10158908 | Ga0265324_101589081 | 202 |
| 49 | 3300031344 | Ga0265316_10171571 | Ga0265316_101715711 | 202 |
| 50 | 3300031711 | Ga0265314_10146771 | Ga0265314_101467712 | 202 |
| 51 | 3300044712 | Ga0453684_0270357 | Ga0453684_0270357_542_1153 | 202 |
| 52 | 3300046517 | Ga0495630_0265720 | Ga0495630_0265720_328_936 | 202 |
| 53 | 3300046533 | Ga0495640_0460276 | Ga0495640_0460276_50_658 | 202 |
| 54 | 3300005340 | Ga0070689_100060991 | Ga0070689_1000609912 | 203 |
| 55 | 3300005466 | Ga0070685_10202758 | Ga0070685_102027582 | 203 |
| 56 | 3300005549 | Ga0070704_100363355 | Ga0070704_1003633552 | 203 |
| 57 | 3300013308 | Ga0157375_10000094 | Ga0157375_1000009428 | 203 |
| 58 | 3300025903 | Ga0207680_10051141 | Ga0207680_100511412 | 203 |
| 59 | 3300025936 | Ga0207670_10215526 | Ga0207670_102155261 | 203 |
| 60 | 3300028666 | Ga0265336_10065344 | Ga0265336_100653442 | 203 |
| 61 | 3300042876 | Ga0451577_0295007 | Ga0451577_0295007_553_1164 | 203 |
| 62 | 3300045051 | Ga0451576_0097175 | Ga0451576_0097175_518_1129 | 203 |
| 63 | 3300046536 | Ga0495587_0156450 | Ga0495587_0156450_100_711 | 203 |
| 64 | 3300047444 | Ga0495675_0110131 | Ga0495675_0110131_838_1449 | 203 |
| 65 | 3300005544 | Ga0070686_100604791 | Ga0070686_1006047911 | 204 |
| 66 | 3300028573 | Ga0265334_10098397 | Ga0265334_100983972 | 204 |
| 67 | 3300046454 | Ga0495592_0109800 | Ga0495592_0109800_418_1032 | 204 |
| 68 | 3300046477 | Ga0495664_0064417 | Ga0495664_0064417_848_1462 | 204 |
| 69 | 3300046516 | Ga0495628_0075539 | Ga0495628_0075539_1214_1828 | 204 |
| 70 | 3300046517 | Ga0495630_0173478 | Ga0495630_0173478_211_825 | 204 |
| 71 | 3300046529 | Ga0495652_0197515 | Ga0495652_0197515_364_978 | 204 |
| 72 | 3300046533 | Ga0495640_0156267 | Ga0495640_0156267_211_825 | 204 |
| 73 | 3300046536 | Ga0495587_0126931 | Ga0495587_0126931_445_1059 | 204 |
| 74 | 3300046543 | Ga0495645_0187924 | Ga0495645_0187924_537_1151 | 204 |
| 75 | 3300046642 | Ga0495634_0125088 | Ga0495634_0125088_700_1314 | 204 |
| 76 | 3300046663 | Ga0495635_0442519 | Ga0495635_0442519_74_688 | 204 |
| 77 | 3300046689 | Ga0495613_0136995 | Ga0495613_0136995_76_690 | 204 |
| 78 | 3300047319 | Ga0495674_0151369 | Ga0495674_0151369_976_1590 | 204 |
| 79 | 3300047444 | Ga0495675_0255536 | Ga0495675_0255536_353_967 | 204 |
| 80 | 3300005340 | Ga0070689_100862807 | Ga0070689_1008628071 | 205 |
| 81 | 3300005445 | Ga0070708_100553489 | Ga0070708_1005534892 | 205 |
| 82 | 3300005577 | Ga0068857_100007957 | Ga0068857_1000079574 | 205 |
| 83 | 3300005614 | Ga0068856_100199578 | Ga0068856_1001995782 | 205 |
| 84 | 3300006175 | Ga0070712_100263041 | Ga0070712_1002630412 | 205 |
| 85 | 3300006358 | Ga0068871_100298718 | Ga0068871_1002987182 | 205 |
| 86 | 3300007076 | Ga0075435_100354518 | Ga0075435_1003545182 | 205 |
| 87 | 3300026078 | Ga0207702_10286196 | Ga0207702_102861962 | 205 |
| 88 | 3300026116 | Ga0207674_10013135 | Ga0207674_100131359 | 205 |
| 89 | 3300028800 | Ga0265338_10132684 | Ga0265338_101326842 | 205 |
| 90 | 3300031727 | Ga0316576_10165282 | Ga0316576_101652822 | 205 |
| 91 | 3300031728 | Ga0316578_10140780 | Ga0316578_101407802 | 205 |
| 92 | 3300036712 | Ga0316584_0101199 | Ga0316584_0101199_672_1289 | 205 |
| 93 | 3300045051 | Ga0451576_0702642 | Ga0451576_0702642_183_809 | 205 |
| 94 | 3300046511 | Ga0495608_0446316 | Ga0495608_0446316_55_675 | 205 |
| 95 | 3300046543 | Ga0495645_0360865 | Ga0495645_0360865_46_672 | 205 |
| 96 | 3300048088 | Ga0495602_0295259 | Ga0495602_0295259_456_1082 | 205 |
| 97 | 3300005329 | Ga0070683_100219871 | Ga0070683_1002198712 | 206 |
| 98 | 3300005458 | Ga0070681_10846986 | Ga0070681_108469861 | 206 |
| 99 | 3300005535 | Ga0070684_100327358 | Ga0070684_1003273582 | 206 |
| 100 | 3300009093 | Ga0105240_10002096 | Ga0105240_1000209627 | 206 |
| 101 | 3300009093 | Ga0105240_10215382 | Ga0105240_102153823 | 206 |
| 102 | 3300044712 | Ga0453684_1269899 | Ga0453684_1269899_74_694 | 206 |
| 103 | 3300049570 | Ga0501033_0059584 | Ga0501033_0059584_1108_1743 | 206 |
| 104 | 3300049579 | Ga0501043_0280561 | Ga0501043_0280561_453_1088 | 206 |
| 105 | 3300049823 | Ga0501044_0009659 | Ga0501044_0009659_8126_8761 | 206 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4f71-assembly1.cif.gz_A | crystal structure of had family enzyme bt-2542 (target efi-501088) from bacteroides thetaiotaomicron, wild-type protein, complex with magnesium and inorganic phosphate | 0.903 | 4 | 187 |
| 4f72-assembly2.cif.gz_B | crystal structure of had family enzyme bt-2542 (target efi-501088) from bacteroides thetaiotaomicron, asp12ala mutant, complex with magnesium and inorganic phosphate | 0.8984 | 4 | 187 |
| 4dfd-assembly2.cif.gz_B | crystal structure of had family enzyme bt-2542 (target efi-501088) from bacteroides thetaiotaomicron, magnesium complex | 0.8885 | 4 | 186 |
| 2b0c-assembly1.cif.gz_A-2 | the crystal structure of the putative phosphatase from escherichia coli | 0.8881 | 4 | 198 |
| 4dcc-assembly1.cif.gz_A | crystal structure of had family enzyme bt-2542 from bacteroides thetaiotaomicron (target efi-501088) | 0.8849 | 4 | 192 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3cnhB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.9135 | 90 | 202 | 3.40.50.1000 |
| af_Q7T012_106_236_3.40.50.1000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.9091 | 94 | 187 | 3.40.50.1000 |
| 2no5A01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.9049 | 88 | 183 | 3.40.50.1000 |
| af_O74529_17_260_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.8994 | 163 | 186 | 3.40.50.150 |
| 2b0cA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.8927 | 4 | 198 | 3.40.50.1000 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7V3T942-F1-model_v4 | HAD family phosphatase | 0.9855 | 4 | 203 |
|
| AF-A0A2E4N6T9-F1-model_v4 | HAD family phosphatase | 0.9855 | 1 | 199 |
|
| AF-A0A6N6PX47-F1-model_v4 | HAD family phosphatase | 0.9852 | 4 | 203 |
|
| AF-A0A7V6ECE9-F1-model_v4 | HAD family phosphatase | 0.984 | 1 | 203 |
|
| AF-A0A7C8DAK5-F1-model_v4 | deleted | 0.9834 | 1 | 201 |
|
Predicted Structure (AlphaFold2)
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