F034449
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 105 | 85 | 210 | 317 |
Family's Representative Sequence
| Representative Sequence | 3300049571|Ga0501034_0031170|Ga0501034_0031170_782_1792 |
| Length | 336 |
| Sequence | MQPILGLSGEHETRRTVSTGGGKRAIIAALLANLGIALTKFVAWALSGSASMLAEAVHSVADTGNQGLLLLGARQSKRRADSEHPFGYGRERYVYAFVVAIILFSIGGVFSIYEGIDKLTHPHTIENAWLPILVLVIAIGLESFSLRTAVKESNHVRGKESWIQFIRHAKAPELPVVLLEDVAALTGLVFAFLGVGLSIITGNTVWDAVGTLAIGTLLVVVAVVLGIETKSLLVGEGARPADTAAIRTAIEAESQVEAIIHLKTLYLGPEELLVAAKVAFAPRTKLADIATAINSLESRVRSAVPIARVIFIEPDIYHKPGKGNPPTDSIVIKASD |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 2 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 3 | 3300003373 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 4 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 5 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 7 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 11 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 12 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 13 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 14 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 15 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 16 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 17 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 19 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 20 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 21 | 3300013250 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 | Metagenome | Rhizosphere |
| 22 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 23 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 24 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 36 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 37 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 38 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 39 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 40 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 41 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 42 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 43 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 44 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 45 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 46 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 47 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 48 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 49 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 50 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 51 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 52 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 53 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 54 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 55 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 56 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 57 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 58 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 59 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 60 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 61 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 62 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 63 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 64 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 65 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 66 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 67 | 3300053133 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere | Metagenome | Endosphere |
| 68 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 69 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 70 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 71 | 2585428094 | Herbiconiux sp. YR403 | Isolate | Rhizosphere |
| 72 | 2643221546 | Microbacterium sp. Root53 | Isolate | Unclassified |
| 73 | 2643221549 | Agromyces sp. Root1464 | Isolate | Unclassified |
| 74 | 2643221597 | Microbacterium sp. Root180 | Isolate | Unclassified |
| 75 | 2643221649 | Leifsonia sp. Root4 | Isolate | Unclassified |
| 76 | 2808606372 | Agromyces sp. 23-23 | Isolate | Unclassified |
| 77 | 2833709550 | Microbacterium sp. 3290 | Isolate | Rhizosphere |
| 78 | 2844852863 | Herbiconiux flava DSM 26474 | Isolate | Rhizosphere |
| 79 | 2905926851 | Arthrobacter sedimenti MIC A30 | Isolate | Rhizosphere |
| 80 | 2919395869 | Microbacterium resistens 2980 | Isolate | Unclassified |
| 81 | 2919443155 | Agromyces sp. 3263 | Isolate | Rhizosphere |
| 82 | 2946003308 | Arthrobacter agilis W3I6 | Isolate | Rhizosphere |
| 83 | 8045830549 | Microbacterium yannicii DSM 23203 | Isolate | Unclassified |
| 84 | 8056037122 | Herbiconiux gentiana CPCC 205716 | Isolate | Rhizosphere |
| 85 | 8057345674 | Herbiconiux aconitum CPCC 205763 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 85.71 |
| Metatranscriptomes | 0 |
| Isolates | 14.29 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 8.57 |
| Nodule | 0 |
| Rhizoplane | 4.76 |
| Rhizosphere | 72.38 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0501034_0031170 | 3300049571 | Bacteria | 5418 |
| 2 | JGI24740J21852_10006857 | 3300001979 | Bacteria | 4675 |
| 3 | JGI25407J50210_10001457 | 3300003373 | Bacteria | 5374 |
| 4 | Ga0065714_10007516 | 3300005288 | Bacteria | 2936 |
| 5 | Ga0065714_10112939 | 3300005288 | Bacteria | 1448 |
| 6 | Ga0070658_10001678 | 3300005327 | Bacteria | 18696 |
| 7 | Ga0070658_10119005 | 3300005327 | Bacteria | 2194 |
| 8 | Ga0068869_100159183 | 3300005334 | Bacteria | 1756 |
| 9 | Ga0070659_100023635 | 3300005366 | Bacteria | 4706 |
| 10 | Ga0070710_10098771 | 3300005437 | Bacteria | 1735 |
| 11 | Ga0070678_100180897 | 3300005456 | Bacteria | 1726 |
| 12 | Ga0068855_100164690 | 3300005563 | Bacteria | 2514 |
| 13 | Ga0068856_100145491 | 3300005614 | Bacteria | 2378 |
| 14 | Ga0081538_10000354 | 3300005981 | Bacteria | 52194 |
| 15 | Ga0105244_10053351 | 3300009036 | Bacteria | 2054 |
| 16 | Ga0105243_10138179 | 3300009148 | Bacteria | 2076 |
| 17 | Ga0105243_10154016 | 3300009148 | Bacteria | 1975 |
| 18 | Ga0105241_10295318 | 3300009174 | Bacteria | 1389 |
| 19 | Ga0105237_10560674 | 3300009545 | Bacteria | 1149 |
| 20 | Ga0105246_10297013 | 3300011119 | Bacteria | 1302 |
| 21 | Ga0157371_10003784 | 3300013102 | Bacteria | 13544 |
| 22 | Ga0157371_10149896 | 3300013102 | Bacteria | 1663 |
| 23 | Ga0157370_10011560 | 3300013104 | Bacteria | 9215 |
| 24 | Ga0157369_10000931 | 3300013105 | Bacteria | 37218 |
| 25 | Ga0171462_1002 | 3300013250 | Bacteria | 1052134 |
| 26 | Ga0163163_10568065 | 3300014325 | Bacteria | 1197 |
| 27 | Ga0163161_10117834 | 3300017792 | Bacteria | 1992 |
| 28 | Ga0207692_10024725 | 3300025898 | Bacteria | 2796 |
| 29 | Ga0207688_10066114 | 3300025901 | Bacteria | 2044 |
| 30 | Ga0207705_10000001 | 3300025909 | Bacteria | 2061880 |
| 31 | Ga0207659_10103033 | 3300025926 | Bacteria | 2156 |
| 32 | Ga0207690_10020677 | 3300025932 | Bacteria | 4071 |
| 33 | Ga0207709_10067688 | 3300025935 | Bacteria | 2254 |
| 34 | Ga0207689_10369187 | 3300025942 | Bacteria | 1194 |
| 35 | Ga0207712_10092118 | 3300025961 | Bacteria | 2234 |
| 36 | Ga0207708_10410343 | 3300026075 | Bacteria | 1122 |
| 37 | Ga0207683_10246255 | 3300026121 | Bacteria | 1631 |
| 38 | Ga0209974_10003419 | 3300027876 | Bacteria | 5729 |
| 39 | Ga0316576_10054315 | 3300031727 | Bacteria | 2921 |
| 40 | Ga0316577_10031210 | 3300031733 | Bacteria | 2977 |
| 41 | Ga0307416_100525751 | 3300032002 | Bacteria | 1252 |
| 42 | Ga0316574_0038363 | 3300035398 | Bacteria | 2940 |
| 43 | Ga0316582_0019835 | 3300036647 | Bacteria | 3943 |
| 44 | Ga0316584_0270668 | 3300036712 | Bacteria | 1236 |
| 45 | Ga0395900_0204500 | 3300037418 | Bacteria | 1996 |
| 46 | Ga0466965_0000010 | 3300044683 | Bacteria | 112032 |
| 47 | Ga0466965_0027607 | 3300044683 | Bacteria | 2756 |
| 48 | Ga0466968_0019466 | 3300044735 | Bacteria | 2732 |
| 49 | Ga0466970_0000001 | 3300044765 | Bacteria | 252791 |
| 50 | Ga0466967_0086276 | 3300045976 | Bacteria | 2844 |
| 51 | Ga0495638_0076075 | 3300046460 | Bacteria | 2045 |
| 52 | Ga0495644_0066104 | 3300046523 | Bacteria | 1358 |
| 53 | Ga0495645_0015135 | 3300046543 | Bacteria | 5484 |
| 54 | Ga0495656_0011522 | 3300046615 | Bacteria | 3248 |
| 55 | Ga0496102_0639579 | 3300048905 | Bacteria | 987 |
| 56 | Ga0496105_0145627 | 3300048908 | Bacteria | 1948 |
| 57 | Ga0496105_0242140 | 3300048908 | Bacteria | 1463 |
| 58 | Ga0496114_0219821 | 3300048917 | Bacteria | 1667 |
| 59 | Ga0496114_0229490 | 3300048917 | Bacteria | 1631 |
| 60 | Ga0496117_0000034 | 3300048920 | Bacteria | 328334 |
| 61 | Ga0496117_0000607 | 3300048920 | Bacteria | 58422 |
| 62 | Ga0496119_0000804 | 3300048922 | Bacteria | 42026 |
| 63 | Ga0496122_0001782 | 3300048925 | Bacteria | 33003 |
| 64 | Ga0496122_0017577 | 3300048925 | Bacteria | 6674 |
| 65 | Ga0496122_0082416 | 3300048925 | Bacteria | 2234 |
| 66 | Ga0496123_0002674 | 3300048926 | Bacteria | 21461 |
| 67 | Ga0496123_0102951 | 3300048926 | Bacteria | 1656 |
| 68 | Ga0501034_0013416 | 3300049571 | Bacteria | 8433 |
| 69 | Ga0501034_0067482 | 3300049571 | Bacteria | 3589 |
| 70 | Ga0501034_0083065 | 3300049571 | Bacteria | 3205 |
| 71 | Ga0501034_0468727 | 3300049571 | Bacteria | 1176 |
| 72 | Ga0501034_0484562 | 3300049571 | Bacteria | 1152 |
| 73 | Ga0501038_0003972 | 3300049574 | Bacteria | 13739 |
| 74 | Ga0501039_0169361 | 3300049575 | Bacteria | 1717 |
| 75 | Ga0501043_0133926 | 3300049579 | Bacteria | 1942 |
| 76 | Ga0501047_0020250 | 3300049581 | Bacteria | 6388 |
| 77 | Ga0501070_0000637 | 3300049586 | Bacteria | 32300 |
| 78 | Ga0501070_0004714 | 3300049586 | Bacteria | 11685 |
| 79 | Ga0501071_0000333 | 3300049587 | Bacteria | 22778 |
| 80 | Ga0501072_0023654 | 3300049588 | Bacteria | 4772 |
| 81 | Ga0501073_0033391 | 3300049589 | Bacteria | 3664 |
| 82 | Ga0500643_000086 | 3300053087 | Bacteria | 97106 |
| 83 | Ga0500556_0000041 | 3300053104 | Bacteria | 134317 |
| 84 | Ga0500655_020362 | 3300053133 | Bacteria | 1239 |
| 85 | Ga0500559_0002124 | 3300053136 | Bacteria | 10556 |
| 86 | Ga0500559_0009886 | 3300053136 | Bacteria | 4112 |
| 87 | Ga0500568_0000003 | 3300053139 | Bacteria | 863587 |
| 88 | Ga0500568_0053167 | 3300053139 | Bacteria | 1588 |
| 89 | Ga0500616_0000152 | 3300053153 | Bacteria | 116194 |
| 90 | Ga0500616_0001208 | 3300053153 | Bacteria | 26113 |
| 91 | 2587862237 | 2585428094 | Bacteria | 3604039 |
| 92 | 2643753990 | 2643221546 | Bacteria | 2910897 |
| 93 | 2643766790 | 2643221549 | Bacteria | 4042819 |
| 94 | 2643996735 | 2643221597 | Bacteria | 3347721 |
| 95 | 2644279936 | 2643221649 | Bacteria | 3867359 |
| 96 | 2808899493 | 2808606372 | Bacteria | 4649509 |
| 97 | 2833712121 | 2833709550 | Bacteria | 4008291 |
| 98 | 2844854034 | 2844852863 | Bacteria | 3849151 |
| 99 | 2905930128 | 2905926851 | Bacteria | 4423176 |
| 100 | 2919397682 | 2919395869 | Bacteria | 3704152 |
| 101 | 2919444296 | 2919443155 | Bacteria | 4072969 |
| 102 | 2946003917 | 2946003308 | Bacteria | 3857229 |
| 103 | 8045833976 | 8045830549 | Bacteria | 4444727 |
| 104 | 8056040150 | 8056037122 | Bacteria | 3854319 |
| 105 | 8057347095 | 8057345674 | Bacteria | 4160394 |
| 106 | Ga0501034_0031170 | |||
| 107 | JGI24740J21852_10006857 | |||
| 108 | JGI25407J50210_10001457 | |||
| 109 | Ga0065714_10007516 | |||
| 110 | Ga0065714_10112939 | |||
| 111 | Ga0070658_10001678 | |||
| 112 | Ga0070658_10119005 | |||
| 113 | Ga0068869_100159183 | |||
| 114 | Ga0070659_100023635 | |||
| 115 | Ga0070710_10098771 | |||
| 116 | Ga0070678_100180897 | |||
| 117 | Ga0068855_100164690 | |||
| 118 | Ga0068856_100145491 | |||
| 119 | Ga0081538_10000354 | |||
| 120 | Ga0105244_10053351 | |||
| 121 | Ga0105243_10138179 | |||
| 122 | Ga0105243_10154016 | |||
| 123 | Ga0105241_10295318 | |||
| 124 | Ga0105237_10560674 | |||
| 125 | Ga0105246_10297013 | |||
| 126 | Ga0157371_10003784 | |||
| 127 | Ga0157371_10149896 | |||
| 128 | Ga0157370_10011560 | |||
| 129 | Ga0157369_10000931 | |||
| 130 | Ga0171462_1002 | |||
| 131 | Ga0163163_10568065 | |||
| 132 | Ga0163161_10117834 | |||
| 133 | Ga0207692_10024725 | |||
| 134 | Ga0207688_10066114 | |||
| 135 | Ga0207705_10000001 | |||
| 136 | Ga0207659_10103033 | |||
| 137 | Ga0207690_10020677 | |||
| 138 | Ga0207709_10067688 | |||
| 139 | Ga0207689_10369187 | |||
| 140 | Ga0207712_10092118 | |||
| 141 | Ga0207708_10410343 | |||
| 142 | Ga0207683_10246255 | |||
| 143 | Ga0209974_10003419 | |||
| 144 | Ga0316576_10054315 | |||
| 145 | Ga0316577_10031210 | |||
| 146 | Ga0307416_100525751 | |||
| 147 | Ga0316574_0038363 | |||
| 148 | Ga0316582_0019835 | |||
| 149 | Ga0316584_0270668 | |||
| 150 | Ga0395900_0204500 | |||
| 151 | Ga0466965_0000010 | |||
| 152 | Ga0466965_0027607 | |||
| 153 | Ga0466968_0019466 | |||
| 154 | Ga0466970_0000001 | |||
| 155 | Ga0466967_0086276 | |||
| 156 | Ga0495638_0076075 | |||
| 157 | Ga0495644_0066104 | |||
| 158 | Ga0495645_0015135 | |||
| 159 | Ga0495656_0011522 | |||
| 160 | Ga0496102_0639579 | |||
| 161 | Ga0496105_0145627 | |||
| 162 | Ga0496105_0242140 | |||
| 163 | Ga0496114_0219821 | |||
| 164 | Ga0496114_0229490 | |||
| 165 | Ga0496117_0000034 | |||
| 166 | Ga0496117_0000607 | |||
| 167 | Ga0496119_0000804 | |||
| 168 | Ga0496122_0001782 | |||
| 169 | Ga0496122_0017577 | |||
| 170 | Ga0496122_0082416 | |||
| 171 | Ga0496123_0002674 | |||
| 172 | Ga0496123_0102951 | |||
| 173 | Ga0501034_0013416 | |||
| 174 | Ga0501034_0067482 | |||
| 175 | Ga0501034_0083065 | |||
| 176 | Ga0501034_0468727 | |||
| 177 | Ga0501034_0484562 | |||
| 178 | Ga0501038_0003972 | |||
| 179 | Ga0501039_0169361 | |||
| 180 | Ga0501043_0133926 | |||
| 181 | Ga0501047_0020250 | |||
| 182 | Ga0501070_0000637 | |||
| 183 | Ga0501070_0004714 | |||
| 184 | Ga0501071_0000333 | |||
| 185 | Ga0501072_0023654 | |||
| 186 | Ga0501073_0033391 | |||
| 187 | Ga0500643_000086 | |||
| 188 | Ga0500556_0000041 | |||
| 189 | Ga0500655_020362 | |||
| 190 | Ga0500559_0002124 | |||
| 191 | Ga0500559_0009886 | |||
| 192 | Ga0500568_0000003 | |||
| 193 | Ga0500568_0053167 | |||
| 194 | Ga0500616_0000152 | |||
| 195 | Ga0500616_0001208 | |||
| 196 | 2587862237 | |||
| 197 | 2643753990 | |||
| 198 | 2643766790 | |||
| 199 | 2643996735 | |||
| 200 | 2644279936 | |||
| 201 | 2808899493 | |||
| 202 | 2833712121 | |||
| 203 | 2844854034 | |||
| 204 | 2905930128 | |||
| 205 | 2919397682 | |||
| 206 | 2919444296 | |||
| 207 | 2946003917 | |||
| 208 | 8045833976 | |||
| 209 | 8056040150 | |||
| 210 | 8057347095 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6vda-assembly1.cif.gz_A-2 | metal-bound c-terminal domain of czcd transporter from thermotoga maritima | 0.9363 | 228 | 303 |
| 2zzt-assembly1.cif.gz_A-2 | crystal structure of the cytosolic domain of the cation diffusion facilitator family protein | 0.9355 | 230 | 303 |
| 5hsp-assembly1.cif.gz_A-2 | mamm ctd m250l | 0.9252 | 227 | 304 |
| 6han-assembly2.cif.gz_B | mamm ctd h264e-e289h | 0.9194 | 227 | 305 |
| 3w63-assembly1.cif.gz_A-2 | mamm-ctd 215-293 | 0.9177 | 227 | 304 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q3V5J4_162_375_1.20.1510.10 | Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain | 0.9462 | 7 | 218 | 1.20.1510.10 |
| af_D3ZWW5_236_448_1.20.1510.10 | Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain | 0.9375 | 8 | 217 | 1.20.1510.10 |
| af_Q10LJ2_305_379_3.30.70.1350 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain | 0.9362 | 228 | 302 | 3.30.70.1350 |
| af_Q3V5J4_162_375_1.20.1510.10 | Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain | 0.9291 | 7 | 218 | 1.20.1510.10 |
| af_P9WGF5_239_328_3.30.70.1350 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain | 0.9236 | 224 | 305 | 3.30.70.1350 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6J6TYY2-F1-model_v4 | Unannotated protein | 0.9729 | 222 | 306 |
|
| AF-A0A0C1UNZ7-F1-model_v4 | Cation diffusion facilitator family transporter | 0.9511 | 1 | 305 |
GO:0006829
GO:0008324 GO:0016020 |
| AF-A0A7C1FLB3-F1-model_v4 | Cation transporter | 0.9491 | 4 | 305 |
GO:0006829
GO:0008324 GO:0016020 |
| AF-A0A6L6C0E2-F1-model_v4 | Cation transporter | 0.9465 | 77 | 305 |
GO:0006829
GO:0008324 GO:0016020 |
| AF-A0A0C1UNZ7-F1-model_v4 | Cation diffusion facilitator family transporter | 0.945 | 1 | 305 |
GO:0006829
GO:0008324 GO:0016020 |