F040400

General Info

Members Datasets Scaffolds Average Seq Length
106 92 212 766

Family's Representative Sequence

Representative Sequence 3300053094|Ga0500566_0001520|Ga0500566_0001520_5316_7940
Length 838
Sequence MTRADSETMEAVTPLGVPRESSRAPSIHANGTGTAPVLRDEDLADDADDALRGTRPPIAIPATHGPFSIEIRVRGRVQGVGFRPAVWKLARELGVSGEVLNDAGGVLIRAGGEPGLLAAFIARLGNERPQLARVESFETRSFHGALPEEFRIVPSEGGAVRTQVAPDAAICEACAADVLDPFSRRYRYPFTTCTQCGPRLSVVTGIPYDRSATTLAERYDGRAVRVEQLSTLDAVDAVSSLLARGEIVAIKGLGGYQLACDATRPEVVAKLRAAKHRDHKPFALMARSIEVIRRYCSPDAIETAMLASPEAPIVVMAASRPDELPPGVAPGLATLGFMLPTTPLHRLILRTLDRPVVMTSGNLADEPQAIDDADAARRLAGIASYALIHDRPIANRVDDSVVRIADGAVRVVRRARGYAPAAIKLPAGFERAPSLLAYGGDLRATFCLVERGEAILSQHQGDLEDPATRADYDRNLAVYTAMFEHVPAAIAADHHPELHTTRLARDHGLAAELPVIEVQHHHAHIASCLVDNGRPLAAPPVLGVVLDGIGLGDDGAMWGGEFLLADYRRARRLATFKPVAMLGGDRASREPWRNLYAHVVEELGWPAFTAKFAELEVHAQLAGKQRPLLDAMLASRVGVRPASSCGRLFDAVAAAVGICFDHQSYDGEAAARLESAVDPHALDEGDELAYPFAIARLPGTSLPYIEPLAMWNALFGDLSLGAPVGVIAARFHRGLSRAVAQMVVKLARPSGGLPMFDTVALSGGCFQNRILLEQCARRLRAVGFTVLAHTQVPTSDGGLALGQAAVCAAQMLDDDGLARGSTLSRLPVIGDGEFDPLA

Samples

Sample ID Description Type Environment
1 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
12 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
13 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
14 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
15 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
16 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
17 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
18 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
19 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
20 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
21 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
22 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
34 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
35 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
36 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
37 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
38 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
39 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
40 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
41 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
42 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
43 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
44 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
45 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
46 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
47 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
48 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
49 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
50 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
51 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
52 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
53 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
54 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
55 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
56 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
57 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
58 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
59 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
60 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
61 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
62 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
63 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
64 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
65 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
66 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
67 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
68 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
69 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
70 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
71 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
72 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
73 2617270889 Nostoc punctiforme PCC 73102 Isolate Unclassified
74 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
75 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
76 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
77 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
78 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
79 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
80 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
81 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
82 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
83 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
84 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
85 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified
86 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
87 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
88 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
89 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified
90 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
91 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
92 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 79.25
Metatranscriptomes 0.94
Isolates 19.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.55
Nodule 10.38
Rhizoplane 0
Rhizosphere 63.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500566_0001520 3300053094 Bacteria 13619
2 JGI24748J21848_1000028 3300002074 Bacteria 91962
3 JGI24034J26672_10000058 3300002239 Bacteria 41887
4 Ga0070676_10009021 3300005328 Bacteria 5395
5 Ga0070667_100000179 3300005367 Bacteria 77442
6 Ga0070678_100017569 3300005456 Bacteria 4612
7 Ga0068853_100016880 3300005539 Bacteria 6016
8 Ga0070665_100000266 3300005548 Bacteria 85554
9 Ga0070665_100016691 3300005548 Bacteria 7358
10 Ga0070665_100085184 3300005548 Bacteria 3166
11 Ga0068856_100026066 3300005614 Bacteria 5701
12 Ga0068859_100057446 3300005617 Bacteria 3920
13 Ga0068858_100000298 3300005842 Bacteria 53388
14 Ga0081540_1019689 3300005983 Bacteria 4089
15 Ga0097620_100057444 3300006931 Bacteria 3920
16 Ga0105240_10001696 3300009093 Bacteria 37333
17 Ga0105245_10064792 3300009098 Bacteria 3303
18 Ga0105247_10000047 3300009101 Bacteria 151385
19 Ga0105237_10007177 3300009545 Bacteria 12239
20 Ga0105239_10001665 3300010375 Bacteria 29281
21 Ga0105239_10058434 3300010375 Bacteria 4232
22 Ga0182008_10010680 3300014497 Bacteria 4909
23 Ga0157377_10000060 3300014745 Bacteria 82791
24 Ga0157379_10008830 3300014968 Bacteria 8789
25 Ga0207710_10000001 3300025900 Bacteria 1797433
26 Ga0207695_10005462 3300025913 Bacteria 16837
27 Ga0207671_10009033 3300025914 Bacteria 8384
28 Ga0207693_10010295 3300025915 Bacteria 7590
29 Ga0207687_10037346 3300025927 Bacteria 3313
30 Ga0207640_10001815 3300025981 Bacteria 11459
31 Ga0207658_10002976 3300025986 Bacteria 12112
32 Ga0207703_10001479 3300026035 Bacteria 21419
33 Ga0207702_10037852 3300026078 Bacteria 4040
34 Ga0207674_10009956 3300026116 Bacteria 10817
35 Ga0268266_10000006 3300028379 Bacteria 1410021
36 Ga0265338_10036439 3300028800 Bacteria 4707
37 Ga0307509_10000016 3300031507 Bacteria 266991
38 Ga0307509_10000069 3300031507 Bacteria 141246
39 Ga0307508_10007349 3300031616 Bacteria 10261
40 Ga0316579_10001463 3300031691 Bacteria 8591
41 Ga0316579_10002063 3300031691 Bacteria 7530
42 Ga0307516_10012661 3300031730 Bacteria 9070
43 Ga0307406_10011563 3300031901 Bacteria 5015
44 Ga0316596_1001421 3300033541 Bacteria 4819
45 Ga0373936_0000042 3300035113 Bacteria 94182
46 Ga0373961_0000066 3300035241 Bacteria 57564
47 Ga0316574_0002776 3300035398 Bacteria 8884
48 Ga0316574_0012152 3300035398 Bacteria 4918
49 Ga0373933_0002822 3300035724 Bacteria 9706
50 Ga0373937_0002589 3300036401 Bacteria 15052
51 Ga0316582_0007858 3300036647 Bacteria 5698
52 Ga0316584_0011953 3300036712 Bacteria 6114
53 Ga0316584_0024516 3300036712 Bacteria 4415
54 Ga0316584_0049770 3300036712 Bacteria 3133
55 Ga0436364_0395559 3300037853 Bacteria 3143
56 Ga0400486_22137 3300038742 Bacteria 3557
57 Ga0400486_27372 3300038742 Bacteria 3595
58 Ga0400486_31373 3300038742 Bacteria 3799
59 Ga0436360_0665768 3300039438 Bacteria 8498
60 Ga0436360_0795680 3300039438 Bacteria 5332
61 Ga0436361_1129178 3300039447 Bacteria 3611
62 Ga0436363_1253189 3300039450 Bacteria 2867
63 Ga0451577_0000483 3300042876 Bacteria 67421
64 Ga0451577_0001708 3300042876 Bacteria 28310
65 Ga0453684_0000194 3300044712 Bacteria 265783
66 Ga0453684_0000261 3300044712 Bacteria 226765
67 Ga0451576_0000649 3300045051 Bacteria 71796
68 Ga0451576_0001569 3300045051 Bacteria 38427
69 Ga0495664_0003168 3300046477 Bacteria 8933
70 Ga0495628_0057869 3300046516 Bacteria 3049
71 Ga0495640_0026273 3300046533 Bacteria 4210
72 Ga0495645_0000500 3300046543 Bacteria 27082
73 Ga0495680_0047238 3300047322 Bacteria 3387
74 Ga0495686_0008861 3300047472 Bacteria 7321
75 Ga0495602_0000143 3300048088 Bacteria 66782
76 Ga0496121_0009135 3300048924 Bacteria 11468
77 Ga0501047_0123041 3300049581 Bacteria 2475
78 Ga0495619_0019799 3300053085 Bacteria 4282
79 Ga0500640_000132 3300053095 Bacteria 14428
80 Ga0500554_000048 3300053102 Bacteria 21032
81 Ga0500572_001013 3300053111 Bacteria 8471
82 Ga0500595_000261 3300053119 Bacteria 34894
83 Ga0500597_015052 3300053120 Bacteria 2916
84 Ga0500614_000201 3300053123 Bacteria 15680
85 Ga0500559_0005129 3300053136 Bacteria 6055
86 2508693050 2508501042 Bacteria 8719808
87 2617914330 2617270889 Bacteria 9064343
88 2753566813 2751185846 Bacteria 7242164
89 2844322745 2844315083 Bacteria 8138177
90 2874594183 2874590934 Bacteria 8299676
91 2874651954 2874645413 Bacteria 8214782
92 2876773589 2876771140 Bacteria 8287509
93 2876824783 2876818435 Bacteria 8274608
94 2879081510 2879074833 Bacteria 8279565
95 2886628188 2886627955 Bacteria 7618130
96 2903734739 2903727486 Bacteria 8281579
97 2906604950 2906602504 Bacteria 8295279
98 2913849716 2913844669 Bacteria 8381711
99 2913918271 2913912277 Bacteria 9037797
100 2913943835 2913939268 Bacteria 8559644
101 3005602659 3005594810 Bacteria 8716512
102 3005725132 3005718088 Bacteria 8283608
103 642599680 642555144 Bacteria 9059191
104 8016613014 8016603502 Bacteria 8731218
105 8019574425 8019565922 Bacteria 9639779
106 8056976594 8056967851 Bacteria 9038162
107 Ga0500566_0001520
108 JGI24748J21848_1000028
109 JGI24034J26672_10000058
110 Ga0070676_10009021
111 Ga0070667_100000179
112 Ga0070678_100017569
113 Ga0068853_100016880
114 Ga0070665_100000266
115 Ga0070665_100016691
116 Ga0070665_100085184
117 Ga0068856_100026066
118 Ga0068859_100057446
119 Ga0068858_100000298
120 Ga0081540_1019689
121 Ga0097620_100057444
122 Ga0105240_10001696
123 Ga0105245_10064792
124 Ga0105247_10000047
125 Ga0105237_10007177
126 Ga0105239_10001665
127 Ga0105239_10058434
128 Ga0182008_10010680
129 Ga0157377_10000060
130 Ga0157379_10008830
131 Ga0207710_10000001
132 Ga0207695_10005462
133 Ga0207671_10009033
134 Ga0207693_10010295
135 Ga0207687_10037346
136 Ga0207640_10001815
137 Ga0207658_10002976
138 Ga0207703_10001479
139 Ga0207702_10037852
140 Ga0207674_10009956
141 Ga0268266_10000006
142 Ga0265338_10036439
143 Ga0307509_10000016
144 Ga0307509_10000069
145 Ga0307508_10007349
146 Ga0316579_10001463
147 Ga0316579_10002063
148 Ga0307516_10012661
149 Ga0307406_10011563
150 Ga0316596_1001421
151 Ga0373936_0000042
152 Ga0373961_0000066
153 Ga0316574_0002776
154 Ga0316574_0012152
155 Ga0373933_0002822
156 Ga0373937_0002589
157 Ga0316582_0007858
158 Ga0316584_0011953
159 Ga0316584_0024516
160 Ga0316584_0049770
161 Ga0436364_0395559
162 Ga0400486_22137
163 Ga0400486_27372
164 Ga0400486_31373
165 Ga0436360_0665768
166 Ga0436360_0795680
167 Ga0436361_1129178
168 Ga0436363_1253189
169 Ga0451577_0000483
170 Ga0451577_0001708
171 Ga0453684_0000194
172 Ga0453684_0000261
173 Ga0451576_0000649
174 Ga0451576_0001569
175 Ga0495664_0003168
176 Ga0495628_0057869
177 Ga0495640_0026273
178 Ga0495645_0000500
179 Ga0495680_0047238
180 Ga0495686_0008861
181 Ga0495602_0000143
182 Ga0496121_0009135
183 Ga0501047_0123041
184 Ga0495619_0019799
185 Ga0500640_000132
186 Ga0500554_000048
187 Ga0500572_001013
188 Ga0500595_000261
189 Ga0500597_015052
190 Ga0500614_000201
191 Ga0500559_0005129
192 2508693050
193 2617914330
194 2753566813
195 2844322745
196 2874594183
197 2874651954
198 2876773589
199 2876824783
200 2879081510
201 2886628188
202 2903734739
203 2906604950
204 2913849716
205 2913918271
206 2913943835
207 3005602659
208 3005725132
209 642599680
210 8016613014
211 8019574425
212 8056976594

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01300

Sua5_yciO_yrdC

Telomere recombination

240

415

0.97

PF07503

zf-HYPF

HypF finger

170

203

0.97

PF17788

HypF_C

HypF Kae1-like domain

430

531

0.97

PF00708

Acylphosphatase

Acylphosphatase

69

152

0.91

PF22521

HypF_C_2

Carbamoyltransferase, Kae1-like Domain, second subdomain

543

803

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7chx-assembly2.cif.gz_B acylphosphatase from staphylococcus aureus 0.9294 4 91
3trg-assembly1.cif.gz_A structure of an acylphosphatase from coxiella burnetii 0.9237 4 91
3vth-assembly2.cif.gz_B crystal structure of full-length hypf in the phosphate- and nucleotide-bound form 0.9137 104 745
3tsq-assembly1.cif.gz_A crystal structure of e. coli hypf with atp and carbamoyl phosphate 0.9098 101 753
3tsq-assembly1.cif.gz_A crystal structure of e. coli hypf with atp and carbamoyl phosphate 0.9085 101 753
ID Description Score Start End Superfamily
3vtiB06 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; 0.9602 460 732 3.30.420.560
3vtiB06 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; 0.9513 460 732 3.30.420.560
af_Q2FYM9_1_89_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9411 5 91 3.30.70.100
3vtiB04 Alpha Beta;2-Layer Sandwich;Translation Initiation Factor IF3; 0.9357 228 362 3.30.110.120
3vthB02 Alpha Beta;2-Layer Sandwich;Translation Initiation Factor IF3; 0.9304 226 354 3.30.110.120
ID Description Score Start End GO Terms
AF-F8XT57-F1-model_v4 deleted 0.9889 327 503
AF-A0A2A4NL08-F1-model_v4 HypF Kae1-like domain-containing protein 0.988 299 747 GO:0003725
GO:0008270
GO:0016743
GO:0051604
AF-X1RDZ2-F1-model_v4 Acylphosphatase-like domain-containing protein 0.9849 3 91 GO:0008270
GO:0016743
GO:0051604
AF-A0A7V9N4B8-F1-model_v4 acylphosphatase (EC 3.6.1.7) 0.9839 1 81 GO:0008270
GO:0016743
GO:0016787
GO:0051604
AF-A0A5E6NPM2-F1-model_v4 [NiFe] hydrogenase metallocenter assembly protein HypF 0.9803 200 346 GO:0003725
GO:0008270
GO:0016743
GO:0051604

Map