F055072

General Info

Members Datasets Scaffolds Average Seq Length
109 77 98 616

Family's Representative Sequence

Representative Sequence 3300035695|Ga0373927_0012453|Ga0373927_0012453_1899_3722
Length 582
Sequence MIKGEYSISVGSFSINRNIYLIDFFTNIAFYHSLSLAHTSPASNNLGVIVIIVPAVGGFIVGLMALYGSKAIRGHGIPEAMEQILTNQSKIRPSITILKPLSAAISIGTGGPFGAEGPIISTGGALGSTVGQILKITHYERKILLAAGATAGMSAIFGSPVAAIFLAIELLLFEFSPRSIIPIALACITGAAGHHFLFEPGPVFPVQDFIEFPSNAALAMYSLIGIVIGFVSVAVTKAVYFIEDAFGKLPIHWAWWPAVGGLVVGVIGYFAPRTLGVGYENIIGLLSGNLPIKIVFFLCLLKFFSWAIALGSGTSGGTLAPLLTIGGASGVLFGDAILYIYPESGVTLSLAALVGMSAIFAGASRAVLTSIIFGLETTAQSNALLPLLAACTAAYLISFLIMKNTIMTEKIARRGIKTPHSYESDILERVTVGQIMKPNSLILDGDSTIQEIQTNLSHGARDLDYFMVADGGRFCGIVSSAKLFNHLQDRNRQLKTLARNADVSVSIDLSLRSATEIMTREKVYVLAIQSGKEKEIVGTVSYKEIIDAIQGGDEHMIKDGSISIKRHLMKIVIRGKRLTKMN

Samples

Sample ID Description Type Environment
1 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
2 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
3 2738543023 Pedobacter sp. OK628 Isolate Unclassified
4 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
5 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
6 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
7 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
8 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
9 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
10 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
11 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
12 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
13 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
14 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
15 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
16 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
17 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
18 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
19 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
38 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
39 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
40 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
41 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
53 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
54 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
55 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
56 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
57 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
58 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
59 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
60 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
61 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
62 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
63 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
64 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
65 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
66 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
67 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
68 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
69 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
70 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
71 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
72 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
73 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
74 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
75 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
76 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
77 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.91
Metatranscriptomes 0
Isolates 10.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.84
Nodule 0
Rhizoplane 0.92
Rhizosphere 72.48
Stem 0
Stem Tuber 0
Unclassified 13.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10001885 3300001990 Bacteria 7497
2 JGI24735J21928_10000020 3300002067 Bacteria 108706
3 JGI25162J39368_1000047 3300002737 Viruses 167507
4 rootH1_10059810 3300003316 Bacteria 16334
5 rootL2_10227686 3300003322 Bacteria 6189
6 rootH1_10001353 3300003323 Bacteria 74530
7 rootH1_10107580 3300003323 Bacteria 13446
8 rootH1_10107669 3300003323 Bacteria 9258
9 rootH1_10167010 3300003323 Bacteria 7625
10 rootH1_10275018 3300003323 Bacteria 2713
11 Ga0055536_1000009 3300003781 Bacteria 311572
12 Ga0055530_10000316 3300003791 Bacteria 43672
13 Ga0070658_10018116 3300005327 Bacteria 5634
14 Ga0070659_100000134 3300005366 Bacteria 56651
15 Ga0070681_10001717 3300005458 Bacteria 19598
16 Ga0070679_100007680 3300005530 Bacteria 10095
17 Ga0068853_100060051 3300005539 Bacteria 3284
18 Ga0070686_100063248 3300005544 Bacteria 2397
19 Ga0068855_100002852 3300005563 Bacteria 21248
20 Ga0068855_100034406 3300005563 Bacteria 6044
21 Ga0068856_100000006 3300005614 Bacteria 223827
22 Ga0068856_100020998 3300005614 Bacteria 6346
23 Ga0068856_100035099 3300005614 Bacteria 4914
24 Ga0075366_10000864 3300006195 Bacteria 14613
25 Ga0075366_10001072 3300006195 Bacteria 13441
26 Ga0105240_10002198 3300009093 Bacteria 31833
27 Ga0105240_10027237 3300009093 Bacteria 7486
28 Ga0105240_10053226 3300009093 Bacteria 5083
29 Ga0105240_10080900 3300009093 Bacteria 3994
30 Ga0105241_10074250 3300009174 Unclassified 2648
31 Ga0105237_10013854 3300009545 Viruses 8437
32 Ga0105237_10020536 3300009545 Viruses 6807
33 Ga0105237_10058151 3300009545 Bacteria 3869
34 Ga0105239_10000011 3300010375 Bacteria 337500
35 Ga0105239_10000042 3300010375 Bacteria 199662
36 Ga0105239_10000432 3300010375 Bacteria 61084
37 Ga0105239_10000597 3300010375 Viruses 51483
38 Ga0105239_10005136 3300010375 Bacteria 15457
39 Ga0105239_10006085 3300010375 Bacteria 14049
40 Ga0157371_10007891 3300013102 Bacteria 8544
41 Ga0157371_10023992 3300013102 Bacteria 4456
42 Ga0157371_10049515 3300013102 Bacteria 2985
43 Ga0157369_10015800 3300013105 Bacteria 8504
44 Ga0163162_10006437 3300013306 Bacteria 11376
45 Ga0157372_10097814 3300013307 Unclassified 3348
46 Ga0157372_10200964 3300013307 Bacteria 2309
47 Ga0163161_10000104 3300017792 Bacteria 81344
48 Ga0209437_100089 3300025233 Bacteria 250476
49 Ga0209646_1002000 3300025246 Bacteria 4880
50 Ga0209026_1000279 3300025250 Bacteria 59283
51 Ga0209026_1001333 3300025250 Bacteria 11068
52 Ga0209676_1000001 3300025292 Bacteria 1852142
53 Ga0209050_1000018 3300025298 Bacteria 723263
54 Ga0207707_10005994 3300025912 Bacteria 10639
55 Ga0207695_10000183 3300025913 Bacteria 181350
56 Ga0207671_10006069 3300025914 Viruses 10886
57 Ga0207671_10009733 3300025914 Viruses 7999
58 Ga0207660_10058362 3300025917 Bacteria 2767
59 Ga0207657_10048740 3300025919 Bacteria 3697
60 Ga0207652_10014319 3300025921 Bacteria 6422
61 Ga0207691_10042888 3300025940 Unclassified 4170
62 Ga0207667_10000356 3300025949 Bacteria 62183
63 Ga0207667_10001209 3300025949 Bacteria 32290
64 Ga0207667_10066079 3300025949 Bacteria 3771
65 Ga0207702_10000023 3300026078 Bacteria 189234
66 Ga0307515_10000077 3300028794 Bacteria 228162
67 Ga0307515_10001024 3300028794 Bacteria 63787
68 Ga0307407_10000020 3300031903 Bacteria 126218
69 Ga0307416_100000042 3300032002 Bacteria 130512
70 Ga0307414_10019939 3300032004 Bacteria 4167
71 Ga0373927_0012453 3300035695 Bacteria 5664
72 Ga0395899_0000037 3300037312 Bacteria 280224
73 Ga0395899_0000050 3300037312 Bacteria 224591
74 Ga0395900_0073317 3300037418 Unclassified 3520
75 Ga0395905_0011240 3300037471 Bacteria 8654
76 Ga0466972_0000180 3300044658 Bacteria 48646
77 Ga0495585_0000057 3300046492 Bacteria 113069
78 Ga0495585_0006665 3300046492 Bacteria 7135
79 Ga0495630_0000620 3300046517 Bacteria 25717
80 Ga0495644_0033131 3300046523 Bacteria 1952
81 Ga0495648_0010303 3300046524 Bacteria 7131
82 Ga0495645_0043351 3300046543 Bacteria 3282
83 Ga0495633_0000004 3300046558 Bacteria 370781
84 Ga0495668_0000055 3300046616 Bacteria 199412
85 Ga0495668_0002908 3300046616 Bacteria 13514
86 Ga0495625_0002936 3300046660 Bacteria 17782
87 Ga0495625_0011664 3300046660 Bacteria 7148
88 Ga0495625_0012165 3300046660 Bacteria 6983
89 Ga0495625_0025419 3300046660 Viruses 4492
90 Ga0495687_002147 3300047443 Bacteria 16458
91 Ga0495686_0000237 3300047472 Bacteria 100373
92 Ga0501044_0034456 3300049823 Bacteria 5309
93 nmdc:mga0k408_44_c2 3300050493 Bacteria 32487
94 Ga0500618_000018 3300053125 Bacteria 163272
95 Ga0500616_0001236 3300053153 Bacteria 25651
96 Ga0500622_0006039 3300053156 Bacteria 7117
97 Ga0500624_000461 3300053157 Bacteria 12173
98 Ga0500636_0052661 3300053177 Bacteria 2390

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046543 Ga0495645_0043351 Ga0495645_0043351_1818_3266 479
2 3300006195 Ga0075366_10001072 Ga0075366_100010726 534
3 3300044658 Ga0466972_0000180 Ga0466972_0000180_27936_29837 534
4 3300046523 Ga0495644_0033131 Ga0495644_0033131_141_1766 537
5 iso_pu_bacteria 2738543023 2739300543 539
6 3300049823 Ga0501044_0034456 Ga0501044_0034456_2710_4611 549
7 3300025246 Ga0209646_1002000 Ga0209646_10020004 550
8 3300025940 Ga0207691_10042888 Ga0207691_100428883 563
9 3300013102 Ga0157371_10007891 Ga0157371_100078911 568
10 3300013105 Ga0157369_10015800 Ga0157369_100158001 568
11 3300035695 Ga0373927_0012453 Ga0373927_0012453_1899_3722 568
12 3300025949 Ga0207667_10000356 Ga0207667_1000035650 571
13 3300046492 Ga0495585_0006665 Ga0495585_0006665_3285_5162 571
14 3300046524 Ga0495648_0010303 Ga0495648_0010303_3299_5176 571
15 3300046558 Ga0495633_0000004 Ga0495633_0000004_270966_272843 571
16 3300046616 Ga0495668_0000055 Ga0495668_0000055_75326_77188 571
17 3300046660 Ga0495625_0011664 Ga0495625_0011664_1974_3851 571
18 3300005614 Ga0068856_100020998 Ga0068856_1000209983 572
19 3300013306 Ga0163162_10006437 Ga0163162_100064374 572
20 3300005544 Ga0070686_100063248 Ga0070686_1000632482 574
21 3300005614 Ga0068856_100000006 Ga0068856_100000006115 574
22 3300026078 Ga0207702_10000023 Ga0207702_1000002399 574
23 3300017792 Ga0163161_10000104 Ga0163161_1000010476 575
24 3300031903 Ga0307407_10000020 Ga0307407_10000020134 576
25 3300032002 Ga0307416_100000042 Ga0307416_100000042130 576
26 3300025250 Ga0209026_1001333 Ga0209026_10013337 577
27 3300005614 Ga0068856_100035099 Ga0068856_1000350994 578
28 3300003323 rootH1_10001353 rootH1_1000135352 579
29 3300028794 Ga0307515_10000077 Ga0307515_10000077178 580
30 3300046660 Ga0495625_0025419 Ga0495625_0025419_47_1930 580
31 3300003323 rootH1_10167010 rootH1_1016701010 584
32 3300053125 Ga0500618_000018 Ga0500618_000018_98168_100033 585
33 3300009093 Ga0105240_10053226 Ga0105240_100532265 586
34 3300009174 Ga0105241_10074250 Ga0105241_100742502 586
35 3300010375 Ga0105239_10000432 Ga0105239_100004324 586
36 3300010375 Ga0105239_10006085 Ga0105239_1000608512 586
37 3300037312 Ga0395899_0000050 Ga0395899_0000050_35624_37447 586
38 3300009093 Ga0105240_10002198 Ga0105240_1000219820 587
39 3300009093 Ga0105240_10027237 Ga0105240_100272374 587
40 3300010375 Ga0105239_10000011 Ga0105239_10000011210 587
41 3300010375 Ga0105239_10005136 Ga0105239_100051367 587
42 3300025913 Ga0207695_10000183 Ga0207695_1000018367 587
43 3300028794 Ga0307515_10001024 Ga0307515_1000102410 587
44 3300046517 Ga0495630_0000620 Ga0495630_0000620_20245_22068 587
45 3300053177 Ga0500636_0052661 Ga0500636_0052661_221_2119 587
46 3300005366 Ga0070659_100000134 Ga0070659_10000013450 588
47 3300005539 Ga0068853_100060051 Ga0068853_1000600513 588
48 3300013102 Ga0157371_10023992 Ga0157371_100239921 588
49 3300013307 Ga0157372_10097814 Ga0157372_100978143 588
50 3300013307 Ga0157372_10200964 Ga0157372_102009641 588
51 3300025919 Ga0207657_10048740 Ga0207657_100487403 588
52 3300037418 Ga0395900_0073317 Ga0395900_0073317_46_1929 588
53 3300037471 Ga0395905_0011240 Ga0395905_0011240_4378_6261 588
54 3300046660 Ga0495625_0012165 Ga0495625_0012165_2114_3979 588
55 3300053156 Ga0500622_0006039 Ga0500622_0006039_3229_5094 588
56 3300001990 JGI24737J22298_10001885 JGI24737J22298_100018854 589
57 3300002067 JGI24735J21928_10000020 JGI24735J21928_1000002087 589
58 3300002737 JGI25162J39368_1000047 JGI25162J39368_1000047160 589
59 3300003316 rootH1_10059810 rootH1_100598105 589
60 3300003322 rootL2_10227686 rootL2_102276865 589
61 3300003323 rootH1_10107580 rootH1_101075808 589
62 3300003323 rootH1_10107669 rootH1_101076695 589
63 3300003323 rootH1_10275018 rootH1_102750181 589
64 3300003781 Ga0055536_1000009 Ga0055536_1000009158 589
65 3300003791 Ga0055530_10000316 Ga0055530_1000031624 589
66 3300005327 Ga0070658_10018116 Ga0070658_100181163 589
67 3300005458 Ga0070681_10001717 Ga0070681_100017178 589
68 3300005530 Ga0070679_100007680 Ga0070679_1000076804 589
69 3300005563 Ga0068855_100002852 Ga0068855_1000028526 589
70 3300005563 Ga0068855_100034406 Ga0068855_1000344064 589
71 3300006195 Ga0075366_10000864 Ga0075366_100008648 589
72 3300009093 Ga0105240_10080900 Ga0105240_100809003 589
73 3300009545 Ga0105237_10013854 Ga0105237_100138547 589
74 3300009545 Ga0105237_10020536 Ga0105237_100205363 589
75 3300009545 Ga0105237_10058151 Ga0105237_100581513 589
76 3300010375 Ga0105239_10000042 Ga0105239_1000004248 589
77 3300010375 Ga0105239_10000597 Ga0105239_1000059737 589
78 3300013102 Ga0157371_10049515 Ga0157371_100495153 589
79 3300025233 Ga0209437_100089 Ga0209437_100089222 589
80 3300025250 Ga0209026_1000279 Ga0209026_100027943 589
81 3300025292 Ga0209676_1000001 Ga0209676_10000011192 589
82 3300025298 Ga0209050_1000018 Ga0209050_1000018392 589
83 3300025912 Ga0207707_10005994 Ga0207707_100059945 589
84 3300025914 Ga0207671_10006069 Ga0207671_100060695 589
85 3300025914 Ga0207671_10009733 Ga0207671_100097336 589
86 3300025917 Ga0207660_10058362 Ga0207660_100583622 589
87 3300025921 Ga0207652_10014319 Ga0207652_100143194 589
88 3300025949 Ga0207667_10001209 Ga0207667_1000120915 589
89 3300025949 Ga0207667_10066079 Ga0207667_100660792 589
90 3300032004 Ga0307414_10019939 Ga0307414_100199394 589
91 3300037312 Ga0395899_0000037 Ga0395899_0000037_253368_255254 589
92 3300046492 Ga0495585_0000057 Ga0495585_0000057_285_2141 589
93 3300046616 Ga0495668_0002908 Ga0495668_0002908_1671_3563 589
94 3300046660 Ga0495625_0002936 Ga0495625_0002936_727_2613 589
95 3300047443 Ga0495687_002147 Ga0495687_002147_2994_4850 589
96 3300047472 Ga0495686_0000237 Ga0495686_0000237_77170_79104 589
97 3300050493 nmdc:mga0k408_44_c2 nmdc:mga0k408_44_c2_27322_29208 589
98 3300053153 Ga0500616_0001236 Ga0500616_0001236_321_2297 589
99 3300053157 Ga0500624_000461 Ga0500624_000461_1968_3848 589
100 iso_pu_bacteria 2585427687 2586209099 589
101 iso_pu_bacteria 2599185184 2599481280 589
102 iso_pu_bacteria 2852623160 2852624197 589
103 iso_pu_bacteria 2884933994 2884936886 589
104 iso_pu_bacteria 2919437846 2919442854 589
105 iso_pu_bacteria 2928078545 2928081877 589
106 iso_pu_bacteria 2928147474 2928151900 589
107 iso_pu_bacteria 2932082852 2932087208 589
108 iso_pu_bacteria 2945997725 2946001070 589
109 iso_pu_bacteria 2954016120 2954019242 589

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00654

Voltage_CLC

Voltage gated chloride channel

57

399

0.97

PF00571

CBS

CBS domain

495

551

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ht4-assembly1.cif.gz_B structure of the escherichia coli clc chloride channel y445w mutant and fab complex 0.9041 8 421
6ad8-assembly2.cif.gz_B crystal structure of the e148d mutant clc-ec1 in 50 mm bromide 0.9038 6 421
1ott-assembly1.cif.gz_B structure of the escherichia coli clc chloride channel e148a mutant and fab complex 0.9024 8 421
2ez0-assembly1.cif.gz_B crystal structure of the s107a/e148q/y445a mutant of ecclc, in complex with a fab fragment 0.9003 6 421
1kpl-assembly1.cif.gz_B crystal structure of the clc chloride channel from s. typhimurium 0.8991 6 421
ID Description Score Start End Superfamily
af_Q57753_14_393_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.9059 9 413 1.10.3080.10
af_P76175_1_418_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.9027 1 421 1.10.3080.10
1kplD00 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8991 6 421 1.10.3080.10
af_P76175_1_418_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8986 1 421 1.10.3080.10
af_Q57753_14_393_1.10.3080.10 Mainly Alpha;Orthogonal Bundle;Clc chloride channel;Clc chloride channel 0.8924 9 413 1.10.3080.10
ID Description Score Start End GO Terms
AF-A0A3M2BDJ4-F1-model_v4 Chloride channel protein 0.9594 47 402 GO:0005247
GO:0016020
AF-A0A533ZW46-F1-model_v4 Chloride channel protein 0.9529 4 448 GO:0005247
GO:0016020
AF-A0A1G0GHV7-F1-model_v4 Chloride channel protein 0.9489 1 427 GO:0005247
GO:0034707
AF-A0A2X0IIZ7-F1-model_v4 Chloride channel protein 0.9484 6 433 GO:0005247
GO:0016020
AF-B8CXA3-F1-model_v4 Chloride channel core 0.9462 25 421 GO:0005247
GO:0016020

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