F063063

General Info

Members Datasets Scaffolds Average Seq Length
111 87 111 234

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100014179|Ga0070698_1000141792
Length 212
Sequence MEGLGGRLESIRGRMSAAARRSGREPESIRLVAVSKTVGPSRIREALLAGQTLFGENRVQESRAKQEAVGSAAVWHLVGHLQRNKAKEAARLFQMVHSVDSVGLLQDLERHGAGREEPLEAAAAGMRHIRVTGLMIIPPYDPDPERSRPLFRELAELGAETDRRDFENVSLRELSMGMSEDFEVAIEEGATLIRVGRALFGERPPVAKKEPA

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
22 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
39 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
40 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
41 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
42 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
43 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
44 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
45 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
46 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
47 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
48 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
49 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
50 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
51 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
52 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
53 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
54 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
55 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
56 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
57 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
60 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
61 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
62 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
63 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
64 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
65 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
66 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
67 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
68 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
69 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
70 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
71 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
72 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
73 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
74 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
75 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
76 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
77 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
78 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
79 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
80 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
81 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
82 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
83 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
84 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
85 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
86 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
87 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.9
Nodule 0
Rhizoplane 0.9
Rhizosphere 97.3
Stem 0
Stem Tuber 0
Unclassified 0.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10150376 3300003323 Bacteria 3274
2 Ga0070680_100706668 3300005336 Bacteria 867
3 Ga0070689_100002572 3300005340 Bacteria 11895
4 Ga0070688_100044926 3300005365 Bacteria 2727
5 Ga0070701_10016005 3300005438 Bacteria 3477
6 Ga0070705_100263689 3300005440 Bacteria 1216
7 Ga0070694_100008445 3300005444 Bacteria 6299
8 Ga0070708_100051857 3300005445 Bacteria 3636
9 Ga0070698_100014179 3300005471 Bacteria 8425
10 Ga0070699_100000025 3300005518 Bacteria 158245
11 Ga0070697_100219235 3300005536 Bacteria 1621
12 Ga0070686_100008351 3300005544 Bacteria 5799
13 Ga0068855_100147482 3300005563 Bacteria 2677
14 Ga0068855_100998878 3300005563 Unclassified 879
15 Ga0068857_100000525 3300005577 Bacteria 27677
16 Ga0068856_100235714 3300005614 Bacteria 1845
17 Ga0068859_100807360 3300005617 Bacteria 1026
18 Ga0068863_100161633 3300005841 Bacteria 2146
19 Ga0081455_10225826 3300005937 Bacteria 1385
20 Ga0097621_100298296 3300006237 Bacteria 1423
21 Ga0068871_100067983 3300006358 Bacteria 2924
22 Ga0075433_10006280 3300006852 Bacteria 9383
23 Ga0075434_100165181 3300006871 Unclassified 2233
24 Ga0097620_100807367 3300006931 Bacteria 1026
25 Ga0099794_10056126 3300007265 Bacteria 1905
26 Ga0105240_10041193 3300009093 Bacteria 5898
27 Ga0105240_10063989 3300009093 Bacteria 4572
28 Ga0105242_10524343 3300009176 Unclassified 1131
29 Ga0105238_10014422 3300009551 Bacteria 7989
30 Ga0105249_10924130 3300009553 Unclassified 940
31 Ga0157372_10407768 3300013307 Bacteria 1584
32 Ga0207695_10156969 3300025913 Bacteria 2209
33 Ga0207662_10023783 3300025918 Bacteria 3522
34 Ga0207670_10002689 3300025936 Bacteria 9347
35 Ga0207670_10087854 3300025936 Bacteria 2191
36 Ga0207667_10042646 3300025949 Bacteria 4821
37 Ga0207639_10368037 3300026041 Bacteria 1288
38 Ga0207641_10093739 3300026088 Bacteria 2632
39 Ga0207674_10002190 3300026116 Bacteria 24729
40 Ga0209588_1030791 3300027671 Unclassified 1715
41 Ga0265337_1000949 3300028556 Bacteria 15169
42 Ga0265334_10033865 3300028573 Bacteria 2030
43 Ga0265323_10013018 3300028653 Bacteria 3326
44 Ga0265323_10086052 3300028653 Unclassified 1057
45 Ga0265338_10000808 3300028800 Bacteria 52850
46 Ga0265338_10001302 3300028800 Bacteria 40875
47 Ga0265338_10001502 3300028800 Bacteria 37738
48 Ga0265338_10092088 3300028800 Bacteria 2501
49 Ga0265324_10041714 3300029957 Bacteria 1587
50 Ga0265324_10095408 3300029957 Unclassified 1011
51 Ga0265320_10112161 3300031240 Bacteria 1248
52 Ga0265340_10116814 3300031247 Unclassified 1229
53 Ga0265339_10006711 3300031249 Bacteria 7518
54 Ga0265327_10215152 3300031251 Bacteria 866
55 Ga0265316_10114236 3300031344 Bacteria 2043
56 Ga0316576_10068692 3300031727 Bacteria 2612
57 Ga0316578_10068492 3300031728 Bacteria 2099
58 Ga0373934_0086727 3300035086 Bacteria 1260
59 Ga0373940_0071853 3300035088 Bacteria 1009
60 Ga0373944_0051104 3300035089 Bacteria 1303
61 Ga0373954_0007238 3300035118 Unclassified 4849
62 Ga0316574_0057668 3300035398 Bacteria 2432
63 Ga0316582_0076953 3300036647 Bacteria 2171
64 Ga0316584_0127833 3300036712 Bacteria 1898
65 Ga0395900_0044932 3300037418 Bacteria 4550
66 Ga0395901_0348841 3300038443 Unclassified 1528
67 Ga0436362_0128199 3300039453 Bacteria 2450
68 Ga0451577_0001593 3300042876 Bacteria 29571
69 Ga0451577_0002973 3300042876 Bacteria 19383
70 Ga0451577_0666613 3300042876 Bacteria 943
71 Ga0453683_0179686 3300044673 Unclassified 1342
72 Ga0453684_0013422 3300044712 Bacteria 13304
73 Ga0453684_0392389 3300044712 Bacteria 1556
74 Ga0453684_0429417 3300044712 Bacteria 1474
75 Ga0451576_0033033 3300045051 Bacteria 5501
76 Ga0451576_0418489 3300045051 Bacteria 1406
77 Ga0451576_0599610 3300045051 Bacteria 1158
78 Ga0451576_1179764 3300045051 Unclassified 800
79 Ga0495641_0015131 3300046461 Unclassified 4139
80 Ga0495639_0078141 3300046475 Unclassified 1537
81 Ga0495664_0002243 3300046477 Bacteria 10354
82 Ga0495618_0002568 3300046514 Bacteria 11630
83 Ga0495618_0119193 3300046514 Bacteria 1690
84 Ga0495618_0234289 3300046514 Unclassified 1155
85 Ga0495628_0001893 3300046516 Bacteria 18989
86 Ga0495630_0167878 3300046517 Bacteria 1671
87 Ga0495630_0473461 3300046517 Bacteria 960
88 Ga0495640_0007853 3300046533 Bacteria 8389
89 Ga0495586_0002732 3300046535 Bacteria 9546
90 Ga0495586_0012181 3300046535 Bacteria 4566
91 Ga0495587_0066678 3300046536 Unclassified 2099
92 Ga0495645_0146061 3300046543 Bacteria 1647
93 Ga0495634_0078064 3300046642 Unclassified 2170
94 Ga0495634_0081201 3300046642 Unclassified 2121
95 Ga0495599_0017941 3300046678 Bacteria 4408
96 Ga0495658_0008571 3300046683 Bacteria 5073
97 Ga0495658_0013468 3300046683 Bacteria 4163
98 Ga0495624_0018057 3300046690 Bacteria 4723
99 Ga0495624_0048043 3300046690 Bacteria 2710
100 Ga0495624_0129438 3300046690 Unclassified 1548
101 Ga0495675_0372108 3300047444 Unclassified 837
102 Ga0496115_0008251 3300048918 Bacteria 7699
103 Ga0501083_0366521 3300049744 Bacteria 937
104 nmdc:mga06r32_429809_c1 3300050510 Bacteria 1301
105 nmdc:mga08y16_703422_c1 3300050511 Unclassified 1010
106 nmdc:mga0n895_1267971_c1 3300050512 Bacteria 709
107 nmdc:mga0n895_79084_c1 3300050512 Unclassified 3274
108 nmdc:mga0rr50_181788_c1 3300050513 Bacteria 1719
109 nmdc:mga0a205_4510_c1 3300050515 Bacteria 12495
110 Ga0495601_0387364 3300053077 Bacteria 907
111 Ga0500650_0068650 3300053098 Bacteria 1657

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045051 Ga0451576_1179764 Ga0451576_1179764_56_721 192
2 3300005471 Ga0070698_100014179 Ga0070698_1000141792 209
3 3300005518 Ga0070699_100000025 Ga0070699_10000002534 209
4 3300044673 Ga0453683_0179686 Ga0453683_0179686_245_958 209
5 3300050510 nmdc:mga06r32_429809_c1 nmdc:mga06r32_429809_c1_260_973 209
6 3300006852 Ga0075433_10006280 Ga0075433_100062807 218
7 3300006871 Ga0075434_100165181 Ga0075434_1001651812 218
8 3300050512 nmdc:mga0n895_79084_c1 nmdc:mga0n895_79084_c1_991_1704 218
9 3300050515 nmdc:mga0a205_4510_c1 nmdc:mga0a205_4510_c1_680_1393 218
10 3300050512 nmdc:mga0n895_1267971_c1 nmdc:mga0n895_1267971_c1_12_677 220
11 3300031247 Ga0265340_10116814 Ga0265340_101168141 226
12 3300039453 Ga0436362_0128199 Ga0436362_0128199_1548_2237 226
13 3300005438 Ga0070701_10016005 Ga0070701_100160052 229
14 3300005440 Ga0070705_100263689 Ga0070705_1002636891 229
15 3300005444 Ga0070694_100008445 Ga0070694_1000084455 229
16 3300005544 Ga0070686_100008351 Ga0070686_1000083513 229
17 3300025918 Ga0207662_10023783 Ga0207662_100237832 229
18 3300035088 Ga0373940_0071853 Ga0373940_0071853_266_955 229
19 3300035118 Ga0373954_0007238 Ga0373954_0007238_2817_3506 229
20 3300046678 Ga0495599_0017941 Ga0495599_0017941_2232_3026 229
21 3300005336 Ga0070680_100706668 Ga0070680_1007066681 230
22 3300005563 Ga0068855_100998878 Ga0068855_1009988782 230
23 3300005614 Ga0068856_100235714 Ga0068856_1002357142 230
24 3300031727 Ga0316576_10068692 Ga0316576_100686924 230
25 3300031728 Ga0316578_10068492 Ga0316578_100684923 230
26 3300035398 Ga0316574_0057668 Ga0316574_0057668_787_1479 230
27 3300036647 Ga0316582_0076953 Ga0316582_0076953_1051_1743 230
28 3300036712 Ga0316584_0127833 Ga0316584_0127833_1008_1700 230
29 3300042876 Ga0451577_0002973 Ga0451577_0002973_14399_15100 230
30 3300042876 Ga0451577_0666613 Ga0451577_0666613_42_734 230
31 3300044712 Ga0453684_0392389 Ga0453684_0392389_781_1482 230
32 3300046461 Ga0495641_0015131 Ga0495641_0015131_1995_2687 230
33 3300046475 Ga0495639_0078141 Ga0495639_0078141_75_767 230
34 3300046535 Ga0495586_0002732 Ga0495586_0002732_5468_6160 230
35 3300046642 Ga0495634_0081201 Ga0495634_0081201_579_1271 230
36 3300046683 Ga0495658_0013468 Ga0495658_0013468_959_1651 230
37 3300046690 Ga0495624_0129438 Ga0495624_0129438_466_1158 230
38 3300028556 Ga0265337_1000949 Ga0265337_100094916 231
39 3300035086 Ga0373934_0086727 Ga0373934_0086727_455_1150 231
40 3300045051 Ga0451576_0418489 Ga0451576_0418489_128_823 231
41 3300045051 Ga0451576_0599610 Ga0451576_0599610_352_1065 231
42 3300046514 Ga0495618_0234289 Ga0495618_0234289_414_1109 231
43 3300046536 Ga0495587_0066678 Ga0495587_0066678_946_1641 231
44 3300046642 Ga0495634_0078064 Ga0495634_0078064_513_1208 231
45 3300005841 Ga0068863_100161633 Ga0068863_1001616332 232
46 3300007265 Ga0099794_10056126 Ga0099794_100561263 232
47 3300009093 Ga0105240_10063989 Ga0105240_100639892 232
48 3300025913 Ga0207695_10156969 Ga0207695_101569692 232
49 3300027671 Ga0209588_1030791 Ga0209588_10307912 232
50 3300045051 Ga0451576_0033033 Ga0451576_0033033_4445_5227 232
51 3300046690 Ga0495624_0018057 Ga0495624_0018057_2092_2790 232
52 3300005365 Ga0070688_100044926 Ga0070688_1000449262 233
53 3300009553 Ga0105249_10924130 Ga0105249_109241301 233
54 3300028800 Ga0265338_10092088 Ga0265338_100920883 233
55 3300046543 Ga0495645_0146061 Ga0495645_0146061_610_1386 233
56 3300048918 Ga0496115_0008251 Ga0496115_0008251_280_981 233
57 3300046517 Ga0495630_0473461 Ga0495630_0473461_230_934 234
58 3300050513 nmdc:mga0rr50_181788_c1 nmdc:mga0rr50_181788_c1_578_1291 234
59 3300053098 Ga0500650_0068650 Ga0500650_0068650_523_1227 234
60 3300003323 rootH1_10150376 rootH1_101503763 235
61 3300005340 Ga0070689_100002572 Ga0070689_10000257213 235
62 3300005445 Ga0070708_100051857 Ga0070708_1000518575 235
63 3300005536 Ga0070697_100219235 Ga0070697_1002192353 235
64 3300005563 Ga0068855_100147482 Ga0068855_1001474823 235
65 3300005577 Ga0068857_100000525 Ga0068857_10000052513 235
66 3300005617 Ga0068859_100807360 Ga0068859_1008073602 235
67 3300005937 Ga0081455_10225826 Ga0081455_102258262 235
68 3300006237 Ga0097621_100298296 Ga0097621_1002982962 235
69 3300006358 Ga0068871_100067983 Ga0068871_1000679833 235
70 3300006931 Ga0097620_100807367 Ga0097620_1008073672 235
71 3300009093 Ga0105240_10041193 Ga0105240_100411931 235
72 3300009176 Ga0105242_10524343 Ga0105242_105243431 235
73 3300009551 Ga0105238_10014422 Ga0105238_100144223 235
74 3300013307 Ga0157372_10407768 Ga0157372_104077681 235
75 3300025936 Ga0207670_10002689 Ga0207670_1000268911 235
76 3300025936 Ga0207670_10087854 Ga0207670_100878542 235
77 3300025949 Ga0207667_10042646 Ga0207667_100426464 235
78 3300026041 Ga0207639_10368037 Ga0207639_103680372 235
79 3300026088 Ga0207641_10093739 Ga0207641_100937392 235
80 3300026116 Ga0207674_10002190 Ga0207674_1000219013 235
81 3300028573 Ga0265334_10033865 Ga0265334_100338653 235
82 3300028653 Ga0265323_10013018 Ga0265323_100130183 235
83 3300028653 Ga0265323_10086052 Ga0265323_100860521 235
84 3300028800 Ga0265338_10000808 Ga0265338_1000080818 235
85 3300028800 Ga0265338_10001302 Ga0265338_100013029 235
86 3300028800 Ga0265338_10001502 Ga0265338_1000150222 235
87 3300029957 Ga0265324_10041714 Ga0265324_100417142 235
88 3300029957 Ga0265324_10095408 Ga0265324_100954081 235
89 3300031240 Ga0265320_10112161 Ga0265320_101121612 235
90 3300031249 Ga0265339_10006711 Ga0265339_100067117 235
91 3300031251 Ga0265327_10215152 Ga0265327_102151521 235
92 3300031344 Ga0265316_10114236 Ga0265316_101142362 235
93 3300035089 Ga0373944_0051104 Ga0373944_0051104_46_756 235
94 3300037418 Ga0395900_0044932 Ga0395900_0044932_2685_3395 235
95 3300038443 Ga0395901_0348841 Ga0395901_0348841_614_1324 235
96 3300042876 Ga0451577_0001593 Ga0451577_0001593_22973_23692 235
97 3300044712 Ga0453684_0013422 Ga0453684_0013422_9273_9992 235
98 3300044712 Ga0453684_0429417 Ga0453684_0429417_488_1207 235
99 3300046477 Ga0495664_0002243 Ga0495664_0002243_464_1186 235
100 3300046514 Ga0495618_0002568 Ga0495618_0002568_7388_8095 235
101 3300046514 Ga0495618_0119193 Ga0495618_0119193_790_1512 235
102 3300046516 Ga0495628_0001893 Ga0495628_0001893_14677_15399 235
103 3300046517 Ga0495630_0167878 Ga0495630_0167878_159_881 235
104 3300046533 Ga0495640_0007853 Ga0495640_0007853_4171_4893 235
105 3300046535 Ga0495586_0012181 Ga0495586_0012181_118_840 235
106 3300046683 Ga0495658_0008571 Ga0495658_0008571_2450_3160 235
107 3300046690 Ga0495624_0048043 Ga0495624_0048043_169_891 235
108 3300047444 Ga0495675_0372108 Ga0495675_0372108_73_786 235
109 3300049744 Ga0501083_0366521 Ga0501083_0366521_77_793 235
110 3300050511 nmdc:mga08y16_703422_c1 nmdc:mga08y16_703422_c1_263_988 235
111 3300053077 Ga0495601_0387364 Ga0495601_0387364_159_872 235

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kzw-assembly2.cif.gz_B crystal structure of yggs family pyridoxal phosphate-dependent enzyme pipy from fusobacterium nucleatum 0.9482 1 222
7f8e-assembly3.cif.gz_C crystal structure of yggs from fusobacterium nucleatum 0.9448 1 222
7ygf-assembly3.cif.gz_C crystal structure of yggs from fusobacterium nucleatum 0.9446 1 222
6kzw-assembly2.cif.gz_B crystal structure of yggs family pyridoxal phosphate-dependent enzyme pipy from fusobacterium nucleatum 0.9398 1 222
7f8e-assembly3.cif.gz_C crystal structure of yggs from fusobacterium nucleatum 0.9366 1 222
ID Description Score Start End Superfamily
5nm8B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9329 2 223 3.20.20.10
5nm8B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9287 2 223 3.20.20.10
af_Q2FZ87_1_222_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.927 4 226 3.20.20.10
af_B9EWG6_2_244_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9245 1 231 3.20.20.10
1w8gA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9244 2 224 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A350EYY0-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9928 1 227 GO:0030170
AF-A0A2N9P0S0-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9926 1 227 GO:0030170
AF-A0A432FCA5-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9925 1 225 GO:0030170
AF-A0A7V6EBV8-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9924 1 225 GO:0030170
AF-A0A382GHN3-F1-model_v4 Alanine racemase N-terminal domain-containing protein 0.992 1 225 GO:0030170

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pLDDT pTM Quality
93.55 0.89 High
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Predicted Structure (AlphaFold2)

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