F068708

General Info

Members Datasets Scaffolds Average Seq Length
112 77 109 602

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10001519|Ga0105240_1000151942
Length 687
Sequence MSDALSGAAAGAGDGKTAAVPGVTVEMAAVVASGPVAATREGATTEEAKQVVMAMATASESVTTLFIIDKLVVCEERGLKTNGMNILKKFLTFDLLLIVYMYFTRLLTLLTFLCGWQALSAQRISYIVSFPNLAHHEAQIELVVSDIPNRTAVFRMSRSSPGRYATHEFGKNVYDITAFDQSGKPLTINRTDGDVWEVPRHSGYIRVQYTLYGNYADGTYVGLDPDAVHLNMPGAFLWMKGLENVPIITVATQLQPTSDSLTFSARNFQYFMDCPTKIGPLRYRSWQVRNPDGKTYAFRIALDGAGDDSIFTSFSEKVQKIVHQEQAVFGETPAYDYGTYTFLASINPYVHGDGMEHRNSTMISIPVAFHGDDRLLDVFAHEFFHCWNVKRIRPSTLEPFNFEKSDMSYELWFAEGFTQYYGGLMVERAGFGKDTDYVKRTLGGLINAKMTTPGARLYSPVQASEEAVFTDAGVSIDKTNFPNIFTTYYFYGGALTRFNKSLDGYMTAVWKKFGKPEIPYNVAGLQDVLSSFTGDRKFADAWFSRYINGHEAIDYNTLLAPAGFLLRPEEGKAWIGNTRSLTEKEGLVIGSNTIRGTPLYDAGLDMDDKILSIDNQDVRTVADLNNVLSHLHPGAAVDIRYLHRNEEKKGTIRPAENPAVSVITFEQADRPVTPAIQQFRKSWLGPK

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
28 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
38 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
51 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
52 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
53 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
54 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
55 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
56 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
57 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
58 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
59 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
60 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
61 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
62 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
63 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
64 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
65 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
66 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
67 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
68 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
71 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
72 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
73 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
74 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
75 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
76 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
77 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.32
Metatranscriptomes 0
Isolates 2.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.93
Nodule 0
Rhizoplane 0
Rhizosphere 76.79
Stem 0
Stem Tuber 0
Unclassified 14.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10078933 3300003316 Bacteria 2935
2 rootH2_10002194 3300003320 Bacteria 10833
3 rootH2_10011598 3300003320 Bacteria 11952
4 rootH2_10011599 3300003320 Bacteria 13933
5 rootL2_10001046 3300003322 Bacteria 6046
6 rootL2_10013517 3300003322 Bacteria 5163
7 rootL2_10100533 3300003322 Bacteria 2610
8 rootH1_10016328 3300003323 Bacteria 20757
9 JGI25160J50197_1000563 3300003354 Bacteria 20992
10 Ga0065165_1003567 3300005262 Bacteria 10753
11 Ga0070676_10030755 3300005328 Bacteria 3064
12 Ga0070683_100010817 3300005329 Bacteria 7853
13 Ga0070691_10000211 3300005341 Bacteria 19650
14 Ga0070691_10007660 3300005341 Bacteria 4949
15 Ga0070661_100043934 3300005344 Bacteria 3264
16 Ga0070679_100062978 3300005530 Bacteria 3697
17 Ga0068853_100001971 3300005539 Bacteria 15129
18 Ga0070686_100028082 3300005544 Bacteria 3410
19 Ga0070665_100000016 3300005548 Bacteria 451538
20 Ga0068855_100000257 3300005563 Bacteria 66593
21 Ga0068855_100005382 3300005563 Bacteria 15615
22 Ga0070664_100049671 3300005564 Bacteria 3548
23 Ga0068857_100015855 3300005577 Bacteria 6596
24 Ga0068852_100013339 3300005616 Bacteria 6288
25 Ga0068860_100000006 3300005843 Bacteria 461966
26 Ga0105240_10001519 3300009093 Bacteria 39462
27 Ga0105240_10007636 3300009093 Bacteria 15663
28 Ga0105240_10008117 3300009093 Bacteria 15070
29 Ga0105240_10081049 3300009093 Unclassified 3989
30 Ga0105240_10214889 3300009093 Bacteria 2244
31 Ga0114129_10010220 3300009147 Bacteria 13385
32 Ga0105237_10011823 3300009545 Bacteria 9231
33 Ga0105237_10014544 3300009545 Bacteria 8222
34 Ga0105237_10115725 3300009545 Unclassified 2674
35 Ga0105239_10000083 3300010375 Bacteria 132046
36 Ga0105239_10000884 3300010375 Bacteria 42500
37 Ga0105239_10001576 3300010375 Bacteria 30132
38 Ga0105239_10030371 3300010375 Bacteria 5942
39 Ga0157373_10030069 3300013100 Unclassified 3909
40 Ga0157371_10001631 3300013102 Bacteria 22970
41 Ga0157371_10004344 3300013102 Bacteria 12418
42 Ga0157370_10036988 3300013104 Bacteria 4735
43 Ga0157370_10117608 3300013104 Bacteria 2483
44 Ga0157369_10052135 3300013105 Bacteria 4427
45 Ga0157374_10000003 3300013296 Bacteria 854471
46 Ga0157374_10149074 3300013296 Bacteria 2273
47 Ga0157378_10000923 3300013297 Bacteria 27055
48 Ga0157372_10003808 3300013307 Bacteria 16203
49 Ga0157372_10020266 3300013307 Bacteria 7172
50 Ga0157372_10033043 3300013307 Bacteria 5679
51 Ga0157376_10003271 3300014969 Bacteria 11143
52 Ga0213876_10007563 3300021384 Bacteria 5900
53 Ga0209676_1001401 3300025292 Bacteria 23328
54 Ga0207426_1000170 3300025302 Bacteria 164216
55 Ga0207645_10017891 3300025907 Bacteria 4674
56 Ga0207695_10000043 3300025913 Bacteria 444585
57 Ga0207695_10000165 3300025913 Bacteria 195908
58 Ga0207695_10000245 3300025913 Bacteria 141090
59 Ga0207695_10039838 3300025913 Bacteria 5047
60 Ga0207695_10062746 3300025913 Unclassified 3834
61 Ga0207671_10006020 3300025914 Bacteria 10958
62 Ga0207671_10069309 3300025914 Bacteria 2629
63 Ga0207671_10073875 3300025914 Bacteria 2548
64 Ga0207691_10012630 3300025940 Bacteria 8093
65 Ga0207661_10003379 3300025944 Bacteria 11090
66 Ga0207667_10000440 3300025949 Bacteria 55666
67 Ga0207667_10003614 3300025949 Bacteria 19078
68 Ga0207639_10014293 3300026041 Bacteria 5578
69 Ga0207674_10006666 3300026116 Bacteria 13561
70 Ga0207683_10032952 3300026121 Bacteria 4501
71 Ga0207698_10028967 3300026142 Bacteria 3958
72 Ga0268266_10000149 3300028379 Bacteria 134809
73 Ga0268264_10000064 3300028381 Bacteria 301274
74 Ga0307511_10004803 3300030521 Bacteria 13818
75 Ga0307516_10004408 3300031730 Bacteria 17396
76 Ga0307516_10034838 3300031730 Bacteria 5055
77 Ga0307510_10000079 3300033180 Bacteria 73286
78 Ga0395900_0007042 3300037418 Bacteria 11644
79 Ga0395900_0028892 3300037418 Bacteria 5684
80 Ga0395900_0063161 3300037418 Bacteria 3806
81 Ga0395898_0072415 3300037466 Bacteria 3329
82 Ga0436365_1287042 3300039437 Bacteria 20912
83 Ga0439436_0002944 3300041404 Bacteria 5166
84 Ga0451577_0056918 3300042876 Bacteria 3487
85 Ga0466969_0001273 3300044656 Bacteria 13596
86 Ga0466972_0000024 3300044658 Bacteria 187985
87 Ga0466972_0000219 3300044658 Bacteria 40306
88 Ga0466970_0042579 3300044765 Bacteria 2415
89 Ga0466957_0000478 3300044842 Bacteria 19864
90 Ga0466957_0036169 3300044842 Bacteria 2967
91 Ga0466959_0000029 3300045049 Bacteria 112104
92 Ga0466959_0016911 3300045049 Bacteria 5338
93 Ga0495668_0006247 3300046616 Bacteria 7861
94 Ga0495611_0000483 3300046648 Bacteria 23751
95 Ga0495649_0033414 3300046694 Bacteria 2831
96 Ga0495687_000158 3300047443 Bacteria 103129
97 Ga0495686_0000039 3300047472 Bacteria 304821
98 Ga0501034_0024981 3300049571 Bacteria 6079
99 Ga0501034_0068025 3300049571 Bacteria 3573
100 Ga0501047_0043589 3300049581 Bacteria 4334
101 Ga0501225_0003484 3300049705 Bacteria 4754
102 Ga0501044_0008372 3300049823 Bacteria 11340
103 Ga0501044_0075655 3300049823 Bacteria 3418
104 Ga0500578_0000054 3300053086 Bacteria 121082
105 Ga0500644_0007379 3300053088 Unclassified 2862
106 Ga0500583_0000005 3300053092 Bacteria 166480
107 Ga0500628_000274 3300053129 Bacteria 9841
108 Ga0500652_030086 3300053131 Bacteria 2122
109 Ga0500645_016205 3300053730 Bacteria 2351

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046694 Ga0495649_0033414 Ga0495649_0033414_1330_2766 474
2 3300037466 Ga0395898_0072415 Ga0395898_0072415_12_1631 535
3 3300003322 rootL2_10013517 rootL2_100135172 553
4 3300003320 rootH2_10002194 rootH2_100021948 559
5 3300003320 rootH2_10011599 rootH2_100115994 563
6 3300053730 Ga0500645_016205 Ga0500645_016205_21_1784 569
7 3300009093 Ga0105240_10008117 Ga0105240_100081173 580
8 3300025913 Ga0207695_10000165 Ga0207695_100001653 580
9 3300005329 Ga0070683_100010817 Ga0070683_1000108173 582
10 3300005563 Ga0068855_100000257 Ga0068855_10000025746 582
11 3300005616 Ga0068852_100013339 Ga0068852_1000133396 582
12 3300009093 Ga0105240_10001519 Ga0105240_1000151942 582
13 3300013100 Ga0157373_10030069 Ga0157373_100300692 582
14 3300013105 Ga0157369_10052135 Ga0157369_100521352 582
15 3300025913 Ga0207695_10000245 Ga0207695_10000245102 582
16 3300025944 Ga0207661_10003379 Ga0207661_1000337912 582
17 3300025949 Ga0207667_10000440 Ga0207667_1000044042 582
18 3300049571 Ga0501034_0024981 Ga0501034_0024981_3409_5223 582
19 3300049571 Ga0501034_0068025 Ga0501034_0068025_1305_3119 582
20 3300049823 Ga0501044_0008372 Ga0501044_0008372_5426_7240 582
21 3300049823 Ga0501044_0075655 Ga0501044_0075655_81_1895 582
22 3300013307 Ga0157372_10033043 Ga0157372_100330432 584
23 3300046648 Ga0495611_0000483 Ga0495611_0000483_18567_20393 585
24 3300053129 Ga0500628_000274 Ga0500628_000274_7624_9498 585
25 3300021384 Ga0213876_10007563 Ga0213876_100075631 586
26 3300039437 Ga0436365_1287042 Ga0436365_1287042_21_1823 586
27 3300047472 Ga0495686_0000039 Ga0495686_0000039_204332_206152 586
28 3300003322 rootL2_10100533 rootL2_101005331 587
29 3300005539 Ga0068853_100001971 Ga0068853_1000019717 587
30 3300009093 Ga0105240_10081049 Ga0105240_100810493 587
31 3300010375 Ga0105239_10000083 Ga0105239_1000008390 587
32 3300013296 Ga0157374_10000003 Ga0157374_10000003420 587
33 3300014969 Ga0157376_10003271 Ga0157376_100032716 587
34 3300025913 Ga0207695_10039838 Ga0207695_100398382 587
35 3300025913 Ga0207695_10062746 Ga0207695_100627463 587
36 3300025914 Ga0207671_10073875 Ga0207671_100738752 587
37 3300026041 Ga0207639_10014293 Ga0207639_100142934 587
38 3300026142 Ga0207698_10028967 Ga0207698_100289674 587
39 3300045049 Ga0466959_0016911 Ga0466959_0016911_658_2496 587
40 3300003320 rootH2_10011598 rootH2_100115987 588
41 3300013307 Ga0157372_10003808 Ga0157372_100038085 588
42 3300031730 Ga0307516_10004408 Ga0307516_1000440813 588
43 3300005548 Ga0070665_100000016 Ga0070665_10000001651 589
44 3300028379 Ga0268266_10000149 Ga0268266_1000014951 589
45 3300033180 Ga0307510_10000079 Ga0307510_1000007950 590
46 3300009093 Ga0105240_10007636 Ga0105240_100076363 591
47 3300010375 Ga0105239_10000884 Ga0105239_1000088424 591
48 3300025913 Ga0207695_10000043 Ga0207695_100000433 591
49 3300009545 Ga0105237_10014544 Ga0105237_100145447 592
50 3300025914 Ga0207671_10006020 Ga0207671_100060207 592
51 3300031730 Ga0307516_10034838 Ga0307516_100348385 592
52 3300005341 Ga0070691_10007660 Ga0070691_100076603 593
53 3300005530 Ga0070679_100062978 Ga0070679_1000629783 593
54 3300009545 Ga0105237_10115725 Ga0105237_101157253 593
55 3300005843 Ga0068860_100000006 Ga0068860_100000006174 594
56 3300028381 Ga0268264_10000064 Ga0268264_1000006421 594
57 3300044658 Ga0466972_0000024 Ga0466972_0000024_180804_182621 595
58 3300044765 Ga0466970_0042579 Ga0466970_0042579_390_2207 595
59 3300047443 Ga0495687_000158 Ga0495687_000158_31010_32830 595
60 3300041404 Ga0439436_0002944 Ga0439436_0002944_845_2665 599
61 3300042876 Ga0451577_0056918 Ga0451577_0056918_823_2637 599
62 iso_pu_bacteria 2839989709 2839991993 599
63 iso_pu_bacteria 2522125168 2522550982 600
64 3300003354 JGI25160J50197_1000563 JGI25160J50197_100056314 601
65 3300025302 Ga0207426_1000170 Ga0207426_100017021 601
66 3300003322 rootL2_10001046 rootL2_100010464 603
67 3300005328 Ga0070676_10030755 Ga0070676_100307551 603
68 3300005341 Ga0070691_10000211 Ga0070691_100002113 603
69 3300005344 Ga0070661_100043934 Ga0070661_1000439342 603
70 3300005544 Ga0070686_100028082 Ga0070686_1000280823 603
71 3300005564 Ga0070664_100049671 Ga0070664_1000496712 603
72 3300013297 Ga0157378_10000923 Ga0157378_1000092325 603
73 3300025907 Ga0207645_10017891 Ga0207645_100178911 603
74 3300025940 Ga0207691_10012630 Ga0207691_100126305 603
75 3300026121 Ga0207683_10032952 Ga0207683_100329524 603
76 iso_pu_bacteria 2738541278 2738726937 603
77 3300005262 Ga0065165_1003567 Ga0065165_10035675 604
78 3300010375 Ga0105239_10030371 Ga0105239_100303714 604
79 3300013104 Ga0157370_10036988 Ga0157370_100369882 604
80 3300013104 Ga0157370_10117608 Ga0157370_101176081 604
81 3300025292 Ga0209676_1001401 Ga0209676_10014013 604
82 3300003316 rootH1_10078933 rootH1_100789333 605
83 3300003323 rootH1_10016328 rootH1_1001632815 605
84 3300005563 Ga0068855_100005382 Ga0068855_10000538216 605
85 3300005577 Ga0068857_100015855 Ga0068857_1000158553 605
86 3300009093 Ga0105240_10214889 Ga0105240_102148891 605
87 3300009147 Ga0114129_10010220 Ga0114129_100102206 605
88 3300009545 Ga0105237_10011823 Ga0105237_100118234 605
89 3300010375 Ga0105239_10001576 Ga0105239_1000157610 605
90 3300013102 Ga0157371_10001631 Ga0157371_1000163111 605
91 3300013102 Ga0157371_10004344 Ga0157371_100043448 605
92 3300013296 Ga0157374_10149074 Ga0157374_101490742 605
93 3300013307 Ga0157372_10020266 Ga0157372_100202662 605
94 3300025914 Ga0207671_10069309 Ga0207671_100693092 605
95 3300025949 Ga0207667_10003614 Ga0207667_1000361419 605
96 3300026116 Ga0207674_10006666 Ga0207674_100066667 605
97 3300030521 Ga0307511_10004803 Ga0307511_100048036 605
98 3300037418 Ga0395900_0007042 Ga0395900_0007042_4904_6739 605
99 3300037418 Ga0395900_0028892 Ga0395900_0028892_357_2192 605
100 3300037418 Ga0395900_0063161 Ga0395900_0063161_1648_3483 605
101 3300044656 Ga0466969_0001273 Ga0466969_0001273_7423_9240 605
102 3300044658 Ga0466972_0000219 Ga0466972_0000219_37485_39317 605
103 3300044842 Ga0466957_0000478 Ga0466957_0000478_9489_11315 605
104 3300044842 Ga0466957_0036169 Ga0466957_0036169_854_2677 605
105 3300045049 Ga0466959_0000029 Ga0466959_0000029_7621_9438 605
106 3300046616 Ga0495668_0006247 Ga0495668_0006247_5718_7553 605
107 3300049581 Ga0501047_0043589 Ga0501047_0043589_2198_4033 605
108 3300049705 Ga0501225_0003484 Ga0501225_0003484_2744_4564 605
109 3300053086 Ga0500578_0000054 Ga0500578_0000054_102560_104389 605
110 3300053088 Ga0500644_0007379 Ga0500644_0007379_330_2150 605
111 3300053092 Ga0500583_0000005 Ga0500583_0000005_101697_103520 605
112 3300053131 Ga0500652_030086 Ga0500652_030086_196_2016 605

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17899

Peptidase_M61_N

Peptidase M61 N-terminal domain

125

280

0.98

PF05299

Peptidase_M61

M61 glycyl aminopeptidase

374

495

0.89

PF13180

PDZ_2

PDZ domain

574

653

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4yo1-assembly1.cif.gz_A structure of legionella pneumophila degq (delta pdz2 variant) 0.9242 504 572
4a8b-assembly1.cif.gz_G symmetrized cryo-em reconstruction of e. coli degq 12-mer in complex with lysozymes 0.8986 504 567
5to1-assembly1.cif.gz_A htra2 exposed (l266r, f303a) mutant 0.8984 504 573
3gdv-assembly1.cif.gz_A crystal structure of degs h198p/d320a mutant modified by dfp and in complex with yqf peptide 0.8968 489 574
8k2y-assembly1.cif.gz_C crystal structure of mucd 0.8933 489 573
ID Description Score Start End Superfamily
4fgmA01 Mainly Beta;Sandwich;Immunoglobulin-like; 0.9167 23 190 2.60.40.3650
af_A0A1D6E958_384_486_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9099 505 574 2.30.42.10
af_Q0J1J3_290_389_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9057 504 543 2.30.42.10
af_Q2G1Z5_167_256_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.904 502 569 2.30.42.10
4fgmA01 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8963 23 190 2.60.40.3650
ID Description Score Start End GO Terms
AF-A0A4Q3BQ82-F1-model_v4 deleted 0.9799 19 321
AF-A0A521PB28-F1-model_v4 M61 family peptidase 0.9733 19 218
AF-A0A661FU27-F1-model_v4 M61 family peptidase 0.9729 18 326
AF-A0A4Q3SKB3-F1-model_v4 deleted 0.9699 45 399
AF-A0A1Q7TUP8-F1-model_v4 Peptidase M61 0.9681 22 600

Feature Viewer

pLDDT pTM Quality
92.81 0.9 High
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Predicted Structure (AlphaFold2)

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