F071843

General Info

Members Datasets Scaffolds Average Seq Length
113 71 113 247

Family's Representative Sequence

Representative Sequence 3300003322|rootL2_10051709|rootL2_100517093
Length 281
Sequence MRKRRRATALYIANGYLPCHGSTPLLFSAFVTPMTLPFGQTRTRVAARHALIAPDGHVKSNVPGISGAATVILINPAMGARFAQLLVTFESGGHATMPENEIETAAYFETGGALVTIGREKTRVSAGGYFFAPAGVAWSITAPKRGTRVTLFQKKYDPLAGYSAPKPIVGDATKISGEPFLGDPDARLQVLLPDDPAFDLAMNIFTYQPGATLPFVETHVMEHGLLMLAGQGVYRLEESWYPVAAGDVIWMAPYCSQWFVAMGKAPASYLYYKDVNRAAIV

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
4 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
5 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
8 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
9 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
10 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
11 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
12 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
13 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
14 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
15 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
16 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
22 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
23 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
24 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
25 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
26 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
27 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
28 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
29 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
30 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
31 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
32 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
33 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
34 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
35 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
36 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
37 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
38 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
39 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
40 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
41 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
42 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
43 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
44 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
45 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
46 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
47 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
48 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
49 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
50 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
51 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
52 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
53 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
54 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
55 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
56 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
57 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
58 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
59 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
60 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
61 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
65 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
66 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
67 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
69 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
70 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
71 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.77
Nodule 0
Rhizoplane 1.77
Rhizosphere 87.61
Stem 0
Stem Tuber 0
Unclassified 8.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10000524 3300003320 Bacteria 95867
2 rootH2_10008254 3300003320 Bacteria 17310
3 rootH2_10021324 3300003320 Bacteria 12669
4 rootH2_10241224 3300003320 Unclassified 1701
5 rootL2_10051709 3300003322 Bacteria 6019
6 rootL2_10205487 3300003322 Bacteria 4183
7 rootL2_10272657 3300003322 Bacteria 4097
8 Ga0070692_10078050 3300005345 Bacteria 1777
9 Ga0070700_100238364 3300005441 Unclassified 1298
10 Ga0070678_100313126 3300005456 Bacteria 1338
11 Ga0070698_100093975 3300005471 Bacteria 2978
12 Ga0081539_10215339 3300005985 Bacteria 877
13 Ga0097621_100047320 3300006237 Bacteria 3485
14 Ga0075435_100556940 3300007076 Unclassified 993
15 Ga0114129_10081719 3300009147 Bacteria 4491
16 Ga0105242_10303827 3300009176 Eukaryota 1457
17 Ga0105248_10508173 3300009177 Bacteria 1359
18 Ga0157369_10747109 3300013105 Bacteria 1006
19 Ga0163163_10069643 3300014325 Unclassified 3502
20 Ga0209050_1000587 3300025298 Bacteria 58345
21 Ga0207663_10290475 3300025916 Bacteria 1218
22 Ga0207664_10642116 3300025929 Unclassified 954
23 Ga0207703_10510590 3300026035 Unclassified 1129
24 Ga0207708_10381688 3300026075 Unclassified 1162
25 Ga0207641_10203987 3300026088 Bacteria 1825
26 Ga0265337_1002047 3300028556 Bacteria 9546
27 Ga0265319_1000979 3300028563 Bacteria 17987
28 Ga0265319_1001117 3300028563 Bacteria 16706
29 Ga0265319_1006919 3300028563 Bacteria 5173
30 Ga0265319_1009224 3300028563 Bacteria 4226
31 Ga0265319_1020348 3300028563 Bacteria 2461
32 Ga0265319_1064855 3300028563 Unclassified 1178
33 Ga0265334_10118324 3300028573 Bacteria 948
34 Ga0265318_10000761 3300028577 Bacteria 21446
35 Ga0265318_10002638 3300028577 Bacteria 9464
36 Ga0265318_10040245 3300028577 Bacteria 1780
37 Ga0265318_10060097 3300028577 Bacteria 1416
38 Ga0265322_10038215 3300028654 Bacteria 1366
39 Ga0265336_10020705 3300028666 Bacteria 2108
40 Ga0307515_10088752 3300028794 Bacteria 3903
41 Ga0265338_10000082 3300028800 Bacteria 176343
42 Ga0265338_10007243 3300028800 Bacteria 13848
43 Ga0265338_10098734 3300028800 Bacteria 2388
44 Ga0265324_10008750 3300029957 Bacteria 3998
45 Ga0265332_10046975 3300031238 Bacteria 1859
46 Ga0265328_10017222 3300031239 Bacteria 2800
47 Ga0265328_10039045 3300031239 Bacteria 1752
48 Ga0265328_10115700 3300031239 Bacteria 998
49 Ga0265320_10000273 3300031240 Bacteria 42448
50 Ga0265320_10000719 3300031240 Bacteria 25341
51 Ga0265320_10001755 3300031240 Bacteria 15362
52 Ga0265320_10005296 3300031240 Bacteria 8307
53 Ga0265320_10009164 3300031240 Bacteria 5991
54 Ga0265320_10009714 3300031240 Bacteria 5775
55 Ga0265320_10037575 3300031240 Bacteria 2438
56 Ga0265320_10059753 3300031240 Bacteria 1821
57 Ga0265325_10060972 3300031241 Unclassified 1914
58 Ga0265340_10022611 3300031247 Bacteria 3214
59 Ga0265339_10003560 3300031249 Bacteria 10883
60 Ga0265327_10000204 3300031251 Bacteria 123713
61 Ga0265327_10000744 3300031251 Bacteria 50640
62 Ga0265327_10047621 3300031251 Bacteria 2260
63 Ga0265316_10022211 3300031344 Bacteria 5358
64 Ga0265316_10115341 3300031344 Bacteria 2031
65 Ga0307408_100002083 3300031548 Bacteria 14398
66 Ga0307408_100056002 3300031548 Bacteria 2858
67 Ga0307408_100177195 3300031548 Bacteria 1707
68 Ga0265313_10002964 3300031595 Bacteria 14146
69 Ga0265313_10007615 3300031595 Bacteria 7349
70 Ga0265313_10009450 3300031595 Bacteria 6331
71 Ga0265313_10015718 3300031595 Bacteria 4389
72 Ga0307508_10000026 3300031616 Bacteria 171622
73 Ga0265314_10006341 3300031711 Bacteria 10495
74 Ga0265314_10100630 3300031711 Bacteria 1858
75 Ga0265342_10006900 3300031712 Bacteria 8394
76 Ga0265342_10013890 3300031712 Bacteria 5372
77 Ga0265342_10055149 3300031712 Bacteria 2360
78 Ga0307413_10011051 3300031824 Bacteria 4416
79 Ga0307406_10000286 3300031901 Bacteria 29626
80 Ga0307406_10047149 3300031901 Bacteria 2715
81 Ga0307409_100036233 3300031995 Bacteria 3624
82 Ga0307416_100200070 3300032002 Bacteria 1895
83 Ga0307414_10000164 3300032004 Bacteria 44375
84 Ga0307414_10066551 3300032004 Bacteria 2576
85 Ga0307414_10185813 3300032004 Bacteria 1676
86 Ga0373927_0170236 3300035695 Bacteria 1428
87 Ga0395905_0038881 3300037471 Bacteria 4463
88 Ga0451853_0659328 3300041512 Unclassified 1292
89 Ga0451577_0434046 3300042876 Bacteria 1193
90 Ga0453684_0008857 3300044712 Bacteria 17828
91 Ga0453684_0010449 3300044712 Bacteria 15873
92 Ga0466960_0129812 3300044901 Bacteria 1329
93 Ga0451576_0166018 3300045051 Bacteria 2304
94 Ga0451576_0187805 3300045051 Unclassified 2158
95 Ga0451576_0588601 3300045051 Bacteria 1169
96 Ga0451576_0599116 3300045051 Unclassified 1158
97 Ga0495641_0022808 3300046461 Bacteria 3124
98 Ga0495586_0005328 3300046535 Bacteria 6880
99 Ga0495613_0083672 3300046689 Bacteria 2317
100 Ga0495674_0483015 3300047319 Unclassified 993
101 Ga0496106_0090566 3300048909 Bacteria 2361
102 Ga0496107_0056246 3300048910 Bacteria 2842
103 Ga0501034_0458809 3300049571 Bacteria 1191
104 Ga0501038_0000065 3300049574 Bacteria 86668
105 Ga0501046_0006262 3300049580 Bacteria 10557
106 Ga0501227_008617 3300049665 Bacteria 2187
107 Ga0501242_013546 3300049674 Bacteria 1003
108 Ga0501083_0121202 3300049744 Unclassified 1715
109 Ga0501035_0022166 3300049822 Bacteria 5835
110 Ga0501045_0583852 3300049824 Unclassified 828
111 nmdc:mga0n895_472976_c1 3300050512 Unclassified 1264
112 nmdc:mga0rr50_581944_c1 3300050513 Unclassified 954
113 Ga0500568_0035394 3300053139 Bacteria 2038

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0458809 Ga0501034_0458809_487_1179 230
2 3300014325 Ga0163163_10069643 Ga0163163_100696432 231
3 3300025298 Ga0209050_1000587 Ga0209050_10005875 233
4 3300044901 Ga0466960_0129812 Ga0466960_0129812_162_905 235
5 3300049824 Ga0501045_0583852 Ga0501045_0583852_56_808 236
6 3300003320 rootH2_10241224 rootH2_102412242 244
7 3300031548 Ga0307408_100002083 Ga0307408_10000208310 244
8 3300031548 Ga0307408_100056002 Ga0307408_1000560022 244
9 3300031548 Ga0307408_100177195 Ga0307408_1001771952 244
10 3300031824 Ga0307413_10011051 Ga0307413_100110514 244
11 3300031901 Ga0307406_10000286 Ga0307406_100002867 244
12 3300031901 Ga0307406_10047149 Ga0307406_100471491 244
13 3300031995 Ga0307409_100036233 Ga0307409_1000362332 244
14 3300032002 Ga0307416_100200070 Ga0307416_1002000702 244
15 3300032004 Ga0307414_10000164 Ga0307414_1000016434 244
16 3300032004 Ga0307414_10066551 Ga0307414_100665512 244
17 3300032004 Ga0307414_10185813 Ga0307414_101858132 244
18 3300049665 Ga0501227_008617 Ga0501227_008617_522_1262 244
19 3300049674 Ga0501242_013546 Ga0501242_013546_90_830 244
20 3300028800 Ga0265338_10007243 Ga0265338_100072432 245
21 3300031249 Ga0265339_10003560 Ga0265339_100035602 245
22 3300003320 rootH2_10008254 rootH2_100082547 246
23 3300003320 rootH2_10021324 rootH2_100213246 246
24 3300003322 rootL2_10272657 rootL2_102726574 246
25 3300005345 Ga0070692_10078050 Ga0070692_100780502 246
26 3300005441 Ga0070700_100238364 Ga0070700_1002383642 246
27 3300005456 Ga0070678_100313126 Ga0070678_1003131262 246
28 3300005471 Ga0070698_100093975 Ga0070698_1000939752 246
29 3300005985 Ga0081539_10215339 Ga0081539_102153391 246
30 3300006237 Ga0097621_100047320 Ga0097621_1000473203 246
31 3300007076 Ga0075435_100556940 Ga0075435_1005569402 246
32 3300009147 Ga0114129_10081719 Ga0114129_100817191 246
33 3300009176 Ga0105242_10303827 Ga0105242_103038272 246
34 3300009177 Ga0105248_10508173 Ga0105248_105081731 246
35 3300013105 Ga0157369_10747109 Ga0157369_107471091 246
36 3300025916 Ga0207663_10290475 Ga0207663_102904752 246
37 3300025929 Ga0207664_10642116 Ga0207664_106421161 246
38 3300026075 Ga0207708_10381688 Ga0207708_103816882 246
39 3300028556 Ga0265337_1002047 Ga0265337_10020473 246
40 3300028563 Ga0265319_1000979 Ga0265319_10009799 246
41 3300028563 Ga0265319_1001117 Ga0265319_10011172 246
42 3300028563 Ga0265319_1006919 Ga0265319_10069196 246
43 3300028563 Ga0265319_1009224 Ga0265319_10092241 246
44 3300028563 Ga0265319_1020348 Ga0265319_10203481 246
45 3300028563 Ga0265319_1064855 Ga0265319_10648552 246
46 3300028573 Ga0265334_10118324 Ga0265334_101183241 246
47 3300028577 Ga0265318_10000761 Ga0265318_100007619 246
48 3300028577 Ga0265318_10002638 Ga0265318_100026382 246
49 3300028577 Ga0265318_10040245 Ga0265318_100402452 246
50 3300028577 Ga0265318_10060097 Ga0265318_100600972 246
51 3300028654 Ga0265322_10038215 Ga0265322_100382151 246
52 3300028794 Ga0307515_10088752 Ga0307515_100887522 246
53 3300028800 Ga0265338_10000082 Ga0265338_10000082142 246
54 3300028800 Ga0265338_10098734 Ga0265338_100987342 246
55 3300029957 Ga0265324_10008750 Ga0265324_100087503 246
56 3300031238 Ga0265332_10046975 Ga0265332_100469752 246
57 3300031239 Ga0265328_10017222 Ga0265328_100172222 246
58 3300031239 Ga0265328_10039045 Ga0265328_100390452 246
59 3300031239 Ga0265328_10115700 Ga0265328_101157002 246
60 3300031240 Ga0265320_10000273 Ga0265320_100002737 246
61 3300031240 Ga0265320_10000719 Ga0265320_1000071912 246
62 3300031240 Ga0265320_10001755 Ga0265320_1000175515 246
63 3300031240 Ga0265320_10005296 Ga0265320_100052962 246
64 3300031240 Ga0265320_10009164 Ga0265320_100091642 246
65 3300031240 Ga0265320_10009714 Ga0265320_100097142 246
66 3300031240 Ga0265320_10037575 Ga0265320_100375752 246
67 3300031240 Ga0265320_10059753 Ga0265320_100597532 246
68 3300031241 Ga0265325_10060972 Ga0265325_100609722 246
69 3300031247 Ga0265340_10022611 Ga0265340_100226113 246
70 3300031251 Ga0265327_10000204 Ga0265327_1000020474 246
71 3300031251 Ga0265327_10000744 Ga0265327_1000074422 246
72 3300031251 Ga0265327_10047621 Ga0265327_100476212 246
73 3300031344 Ga0265316_10022211 Ga0265316_100222112 246
74 3300031344 Ga0265316_10115341 Ga0265316_101153412 246
75 3300031595 Ga0265313_10002964 Ga0265313_1000296412 246
76 3300031595 Ga0265313_10007615 Ga0265313_100076152 246
77 3300031595 Ga0265313_10009450 Ga0265313_100094502 246
78 3300031595 Ga0265313_10015718 Ga0265313_100157182 246
79 3300031616 Ga0307508_10000026 Ga0307508_1000002673 246
80 3300031711 Ga0265314_10006341 Ga0265314_100063415 246
81 3300031711 Ga0265314_10100630 Ga0265314_101006302 246
82 3300031712 Ga0265342_10006900 Ga0265342_100069005 246
83 3300031712 Ga0265342_10013890 Ga0265342_100138902 246
84 3300031712 Ga0265342_10055149 Ga0265342_100551492 246
85 3300035695 Ga0373927_0170236 Ga0373927_0170236_344_1087 246
86 3300037471 Ga0395905_0038881 Ga0395905_0038881_3494_4249 246
87 3300041512 Ga0451853_0659328 Ga0451853_0659328_444_1187 246
88 3300042876 Ga0451577_0434046 Ga0451577_0434046_149_892 246
89 3300044712 Ga0453684_0008857 Ga0453684_0008857_14927_15670 246
90 3300044712 Ga0453684_0010449 Ga0453684_0010449_575_1318 246
91 3300045051 Ga0451576_0166018 Ga0451576_0166018_44_787 246
92 3300045051 Ga0451576_0588601 Ga0451576_0588601_127_870 246
93 3300045051 Ga0451576_0599116 Ga0451576_0599116_12_755 246
94 3300046461 Ga0495641_0022808 Ga0495641_0022808_1393_2136 246
95 3300046535 Ga0495586_0005328 Ga0495586_0005328_6095_6838 246
96 3300046689 Ga0495613_0083672 Ga0495613_0083672_809_1552 246
97 3300047319 Ga0495674_0483015 Ga0495674_0483015_185_928 246
98 3300049580 Ga0501046_0006262 Ga0501046_0006262_9056_9799 246
99 3300049744 Ga0501083_0121202 Ga0501083_0121202_744_1487 246
100 3300049822 Ga0501035_0022166 Ga0501035_0022166_3260_4003 246
101 3300050512 nmdc:mga0n895_472976_c1 nmdc:mga0n895_472976_c1_136_879 246
102 3300050513 nmdc:mga0rr50_581944_c1 nmdc:mga0rr50_581944_c1_60_803 246
103 3300053139 Ga0500568_0035394 Ga0500568_0035394_1202_1945 246
104 3300003320 rootH2_10000524 rootH2_1000052453 247
105 3300003322 rootL2_10051709 rootL2_100517093 247
106 3300003322 rootL2_10205487 rootL2_102054873 247
107 3300026035 Ga0207703_10510590 Ga0207703_105105902 247
108 3300026088 Ga0207641_10203987 Ga0207641_102039873 247
109 3300028666 Ga0265336_10020705 Ga0265336_100207052 247
110 3300045051 Ga0451576_0187805 Ga0451576_0187805_471_1217 247
111 3300048909 Ga0496106_0090566 Ga0496106_0090566_256_1002 247
112 3300048910 Ga0496107_0056246 Ga0496107_0056246_1930_2676 247
113 3300049574 Ga0501038_0000065 Ga0501038_0000065_7681_8424 247

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07883

Cupin_2

Cupin domain

203

272

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1sef-assembly1.cif.gz_A crystal structure of cupin domain protein ef2996 from enterococcus faecalis 0.9503 2 247
1sfn-assembly1.cif.gz_A crystal structure of protein dr1152 from deinococcus radiodurans r1, pfam duf861 0.9476 5 246
1sef-assembly1.cif.gz_A crystal structure of cupin domain protein ef2996 from enterococcus faecalis 0.9428 2 247
4e2q-assembly1.cif.gz_G crystal structure of (s)-ureidoglycine aminohydrolase from arabidopsis thaliana 0.9417 4 246
1rc6-assembly1.cif.gz_A crystal structure of protein ylba from e. coli, pfam duf861 0.9306 7 244
ID Description Score Start End Superfamily
1sefA01 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9519 143 247 2.60.120.10
1sfnA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9476 5 246 2.60.120.10
3fjsA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.941 156 242 2.60.120.10
4e2qH00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9317 4 246 2.60.120.10
1rc6A00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9306 7 244 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A840V0K3-F1-model_v4 (S)-ureidoglycine aminohydrolase (EC 3.5.3.26) 0.9745 6 245 GO:0071522
AF-A0A1H2EM25-F1-model_v4 (S)-ureidoglycine aminohydrolase 0.9745 1 247 GO:0071522
AF-B3E0G4-F1-model_v4 Cupin domain containing protein, possibly involved in glyoxylate utilization 0.9741 3 246 GO:0071522
AF-Q24PU3-F1-model_v4 Cupin 2 conserved barrel domain-containing protein 0.9737 120 244 GO:0071522
AF-A0A2A6RPU2-F1-model_v4 (S)-ureidoglycine aminohydrolase 0.973 2 245 GO:0071522

Feature Viewer

pLDDT pTM Quality
94.4 0.91 High
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Predicted Structure (AlphaFold2)

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