F074328

General Info

Members Datasets Scaffolds Average Seq Length
113 75 113 518

Family's Representative Sequence

Representative Sequence 3300026075|Ga0207708_10059531|Ga0207708_100595312
Length 588
Sequence MSKPFYITTAIDYVNGQPHLGHAYEKIVTDVIARARRALGEEVFFLTGLDEHGQKVQQAAQKSGRPAQAYCDALAEDWRKFTARIHLTNNDFIRTTEPRHKAVVQSILSKLHDAGHFYKAQYHGWYSPKEETFLTSKDRLPDGGFDPSWGEVIELTEDNYYFKLKDHQPWLIDYIETHPDFIQPVYRRNEVLGLLKNNTLEDLCITRPASRLNWGIPVPFDTSFVTYVWFDALVNYVSVPAALGDATVCAAINPQLPRRDSQLNLWPADAHVIGKDILKFHAVYWPIMLKAMGLPLPKQLLVHGWWQKDGEKISKQTGNTVDPSAVIDEWGVDAFRYYVVRELDIGPDGNWTKAGFTARYQAELANGLGNLVNRSLSMLKRYRNGIVPKTSAELASDASAAVSSATRQYREFQLQSALESIWGLVNRANQYVDQTAPFKLAKDPAQAQRLDEVLYNLVETCRILAVLLWPVVPTSSEKIYSQLGLSGAPDKLSEAAWGNSHRAILSANRRRCSRARTRRGSDRSSSSVTILPRSSGHLSARPAGGRHRAAISPRGAGFTLNRHARGGARIFLLSFRDELVYRLHTHST

Samples

Sample ID Description Type Environment
1 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
2 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
3 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
4 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
5 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
6 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
7 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
8 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
16 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
17 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
19 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
20 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
21 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
22 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
23 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
34 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
35 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
36 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
37 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
38 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
39 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
40 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
41 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
42 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
43 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
44 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
45 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
46 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
47 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
48 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
49 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
50 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
51 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
52 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
53 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
54 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
55 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
56 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
57 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
58 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
59 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
60 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
61 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
62 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
63 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
64 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
65 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
66 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
67 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
68 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
74 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
75 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.88
Rhizosphere 99.12
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070701_10052877 3300005438 Unclassified 2112
2 Ga0070700_100062664 3300005441 Bacteria 2350
3 Ga0070694_100050396 3300005444 Unclassified 2807
4 Ga0070708_100060879 3300005445 Bacteria 3371
5 Ga0070681_10070039 3300005458 Bacteria 3473
6 Ga0070681_10164110 3300005458 Bacteria 2145
7 Ga0070686_100004699 3300005544 Bacteria 7529
8 Ga0070704_100007526 3300005549 Bacteria 6484
9 Ga0068855_100134053 3300005563 Bacteria 2826
10 Ga0068857_100001241 3300005577 Bacteria 19914
11 Ga0068856_100000089 3300005614 Bacteria 85631
12 Ga0068856_100208285 3300005614 Bacteria 1970
13 Ga0068864_100093754 3300005618 Unclassified 2652
14 Ga0068863_100018705 3300005841 Bacteria 6629
15 Ga0068862_100159971 3300005844 Bacteria 2010
16 Ga0075428_100141475 3300006844 Unclassified 2616
17 Ga0075431_100039428 3300006847 Bacteria 4866
18 Ga0075431_100126242 3300006847 Bacteria 2640
19 Ga0105240_10038883 3300009093 Bacteria 6099
20 Ga0105240_10047389 3300009093 Bacteria 5439
21 Ga0105240_10088224 3300009093 Unclassified 3796
22 Ga0111539_10021087 3300009094 Bacteria 8023
23 Ga0111539_10193135 3300009094 Bacteria 2375
24 Ga0105241_10142623 3300009174 Bacteria 1952
25 Ga0105242_10098619 3300009176 Bacteria 2471
26 Ga0105238_10007385 3300009551 Bacteria 11011
27 Ga0157375_10000006 3300013308 Bacteria 384086
28 Ga0163163_10000327 3300014325 Bacteria 46030
29 Ga0163163_10005394 3300014325 Bacteria 11050
30 Ga0207707_10142554 3300025912 Bacteria 2095
31 Ga0207695_10076361 3300025913 Unclassified 3406
32 Ga0207652_10099960 3300025921 Bacteria 2560
33 Ga0207694_10033533 3300025924 Bacteria 3933
34 Ga0207670_10140358 3300025936 Bacteria 1781
35 Ga0207667_10135854 3300025949 Bacteria 2532
36 Ga0207708_10059531 3300026075 Bacteria 2915
37 Ga0207702_10032459 3300026078 Bacteria 4357
38 Ga0207641_10240908 3300026088 Unclassified 1685
39 Ga0207674_10023618 3300026116 Bacteria 6582
40 Ga0265319_1000004 3300028563 Bacteria 305085
41 Ga0265319_1012322 3300028563 Bacteria 3461
42 Ga0265323_10000058 3300028653 Bacteria 61416
43 Ga0265338_10000036 3300028800 Bacteria 238689
44 Ga0265338_10019955 3300028800 Bacteria 7077
45 Ga0265338_10020437 3300028800 Bacteria 6963
46 Ga0265338_10020723 3300028800 Bacteria 6898
47 Ga0265338_10022110 3300028800 Bacteria 6604
48 Ga0265338_10032300 3300028800 Bacteria 5110
49 Ga0265338_10148453 3300028800 Bacteria 1825
50 Ga0265324_10001049 3300029957 Bacteria 16838
51 Ga0265324_10006388 3300029957 Bacteria 4923
52 Ga0265320_10021486 3300031240 Bacteria 3469
53 Ga0265340_10004581 3300031247 Bacteria 7699
54 Ga0265327_10000467 3300031251 Bacteria 71664
55 Ga0265327_10007637 3300031251 Bacteria 8288
56 Ga0265327_10038842 3300031251 Bacteria 2592
57 Ga0265313_10002983 3300031595 Bacteria 14112
58 Ga0373928_0000142 3300035084 Bacteria 13704
59 Ga0373929_0000081 3300035085 Bacteria 15931
60 Ga0373944_0000081 3300035089 Bacteria 16516
61 Ga0373932_0000003 3300035112 Bacteria 459351
62 Ga0373945_0019040 3300035116 Bacteria 2340
63 Ga0373946_0023664 3300035171 Bacteria 2402
64 Ga0373931_0000017 3300035691 Bacteria 207733
65 Ga0373935_0026540 3300035692 Bacteria 3575
66 Ga0373933_0017499 3300035724 Bacteria 4020
67 Ga0373947_0006389 3300035725 Bacteria 6849
68 Ga0373947_0083954 3300035725 Bacteria 1976
69 Ga0373937_0191849 3300036401 Bacteria 1920
70 Ga0373925_0001468 3300037068 Bacteria 20314
71 Ga0373925_0002690 3300037068 Bacteria 14103
72 Ga0373925_0010130 3300037068 Bacteria 6844
73 Ga0451577_0039564 3300042876 Bacteria 4237
74 Ga0453684_0002720 3300044712 Bacteria 41901
75 Ga0453684_0009466 3300044712 Bacteria 17036
76 Ga0453684_0114783 3300044712 Bacteria 3265
77 Ga0451576_0021685 3300045051 Bacteria 6978
78 Ga0451576_0043343 3300045051 Unclassified 4749
79 Ga0451576_0052306 3300045051 Bacteria 4280
80 Ga0451576_0133493 3300045051 Bacteria 2588
81 Ga0451576_0235010 3300045051 Bacteria 1914
82 Ga0451576_0252639 3300045051 Bacteria 1843
83 Ga0495592_0000054 3300046454 Bacteria 107373
84 Ga0495618_0005210 3300046514 Bacteria 7944
85 Ga0495618_0017903 3300046514 Bacteria 4347
86 Ga0495628_0001279 3300046516 Bacteria 23024
87 Ga0495630_0000209 3300046517 Bacteria 46248
88 Ga0495630_0003500 3300046517 Bacteria 10915
89 Ga0495630_0009938 3300046517 Bacteria 6850
90 Ga0495630_0023906 3300046517 Bacteria 4518
91 Ga0495640_0011348 3300046533 Bacteria 6859
92 Ga0495586_0000061 3300046535 Bacteria 65869
93 Ga0495586_0000960 3300046535 Bacteria 16322
94 Ga0495586_0011916 3300046535 Bacteria 4618
95 Ga0495586_0029941 3300046535 Bacteria 2914
96 Ga0495634_0000889 3300046642 Bacteria 28667
97 Ga0495599_0008376 3300046678 Bacteria 6284
98 Ga0495599_0016033 3300046678 Bacteria 4650
99 Ga0495613_0016727 3300046689 Bacteria 5461
100 Ga0495613_0028311 3300046689 Bacteria 4167
101 Ga0495581_0026427 3300047315 Bacteria 3365
102 Ga0495674_0000613 3300047319 Bacteria 33475
103 Ga0495674_0008944 3300047319 Bacteria 9518
104 Ga0496115_0007111 3300048918 Bacteria 8219
105 Ga0501031_0051935 3300049568 Bacteria 2671
106 Ga0501032_0022437 3300049569 Bacteria 4375
107 Ga0501033_0005577 3300049570 Bacteria 9954
108 Ga0501043_0067224 3300049579 Bacteria 2815
109 Ga0501035_0001599 3300049822 Bacteria 22935
110 Ga0501035_0159789 3300049822 Bacteria 1951
111 Ga0501044_0001468 3300049823 Bacteria 27685
112 nmdc:mga06r32_44018_c1 3300050510 Bacteria 4249
113 nmdc:mga08y16_9818_c1 3300050511 Bacteria 10046

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009093 Ga0105240_10047389 Ga0105240_100473892 474
2 3300049569 Ga0501032_0022437 Ga0501032_0022437_1564_3189 488
3 3300029957 Ga0265324_10006388 Ga0265324_100063882 494
4 3300028800 Ga0265338_10022110 Ga0265338_100221108 496
5 3300026088 Ga0207641_10240908 Ga0207641_102409081 498
6 3300009551 Ga0105238_10007385 Ga0105238_100073853 501
7 3300025924 Ga0207694_10033533 Ga0207694_100335333 501
8 3300026078 Ga0207702_10032459 Ga0207702_100324592 501
9 3300028563 Ga0265319_1000004 Ga0265319_100000476 501
10 3300028800 Ga0265338_10019955 Ga0265338_100199554 501
11 3300028800 Ga0265338_10020437 Ga0265338_100204374 501
12 3300028800 Ga0265338_10020723 Ga0265338_100207234 501
13 3300028800 Ga0265338_10148453 Ga0265338_101484531 501
14 3300031247 Ga0265340_10004581 Ga0265340_100045815 501
15 3300031251 Ga0265327_10000467 Ga0265327_1000046725 501
16 3300031251 Ga0265327_10007637 Ga0265327_100076372 501
17 3300031595 Ga0265313_10002983 Ga0265313_100029839 501
18 3300037068 Ga0373925_0010130 Ga0373925_0010130_1265_2770 501
19 3300044712 Ga0453684_0114783 Ga0453684_0114783_827_2359 501
20 3300046535 Ga0495586_0029941 Ga0495586_0029941_1202_2764 501
21 3300045051 Ga0451576_0252639 Ga0451576_0252639_91_1656 503
22 3300005614 Ga0068856_100000089 Ga0068856_1000000894 504
23 3300049568 Ga0501031_0051935 Ga0501031_0051935_385_1899 504
24 3300049579 Ga0501043_0067224 Ga0501043_0067224_1201_2715 504
25 3300049822 Ga0501035_0159789 Ga0501035_0159789_212_1726 504
26 3300048918 Ga0496115_0007111 Ga0496115_0007111_2483_4075 512
27 3300006847 Ga0075431_100126242 Ga0075431_1001262422 513
28 3300005618 Ga0068864_100093754 Ga0068864_1000937542 517
29 3300005841 Ga0068863_100018705 Ga0068863_1000187055 517
30 3300014325 Ga0163163_10005394 Ga0163163_100053946 517
31 3300028800 Ga0265338_10000036 Ga0265338_10000036157 517
32 3300029957 Ga0265324_10001049 Ga0265324_100010494 517
33 3300044712 Ga0453684_0009466 Ga0453684_0009466_2367_3920 517
34 3300045051 Ga0451576_0052306 Ga0451576_0052306_1856_3409 517
35 3300005458 Ga0070681_10070039 Ga0070681_100700392 518
36 3300005458 Ga0070681_10164110 Ga0070681_101641101 518
37 3300005563 Ga0068855_100134053 Ga0068855_1001340533 518
38 3300005577 Ga0068857_100001241 Ga0068857_1000012417 518
39 3300005614 Ga0068856_100208285 Ga0068856_1002082851 518
40 3300009093 Ga0105240_10038883 Ga0105240_100388834 518
41 3300013308 Ga0157375_10000006 Ga0157375_1000000669 518
42 3300014325 Ga0163163_10000327 Ga0163163_100003277 518
43 3300025912 Ga0207707_10142554 Ga0207707_101425541 518
44 3300025913 Ga0207695_10076361 Ga0207695_100763613 518
45 3300025921 Ga0207652_10099960 Ga0207652_100999602 518
46 3300025949 Ga0207667_10135854 Ga0207667_101358542 518
47 3300026116 Ga0207674_10023618 Ga0207674_100236182 518
48 3300028653 Ga0265323_10000058 Ga0265323_1000005824 518
49 3300028800 Ga0265338_10032300 Ga0265338_100323003 518
50 3300031240 Ga0265320_10021486 Ga0265320_100214862 518
51 3300031251 Ga0265327_10038842 Ga0265327_100388422 518
52 3300035171 Ga0373946_0023664 Ga0373946_0023664_675_2231 518
53 3300035692 Ga0373935_0026540 Ga0373935_0026540_1844_3400 518
54 3300035724 Ga0373933_0017499 Ga0373933_0017499_305_1861 518
55 3300035725 Ga0373947_0006389 Ga0373947_0006389_1283_2839 518
56 3300037068 Ga0373925_0002690 Ga0373925_0002690_2385_3941 518
57 3300045051 Ga0451576_0021685 Ga0451576_0021685_1896_3452 518
58 3300045051 Ga0451576_0043343 Ga0451576_0043343_258_1814 518
59 3300045051 Ga0451576_0133493 Ga0451576_0133493_181_1737 518
60 3300046514 Ga0495618_0005210 Ga0495618_0005210_4851_6407 518
61 3300046517 Ga0495630_0000209 Ga0495630_0000209_16621_18177 518
62 3300046517 Ga0495630_0009938 Ga0495630_0009938_787_2343 518
63 3300046517 Ga0495630_0023906 Ga0495630_0023906_944_2500 518
64 3300046533 Ga0495640_0011348 Ga0495640_0011348_2858_4414 518
65 3300046535 Ga0495586_0000061 Ga0495586_0000061_27928_29484 518
66 3300046535 Ga0495586_0011916 Ga0495586_0011916_922_2478 518
67 3300046642 Ga0495634_0000889 Ga0495634_0000889_10820_12376 518
68 3300046678 Ga0495599_0016033 Ga0495599_0016033_2987_4543 518
69 3300046689 Ga0495613_0016727 Ga0495613_0016727_3083_4639 518
70 3300046689 Ga0495613_0028311 Ga0495613_0028311_1521_3140 518
71 3300047315 Ga0495581_0026427 Ga0495581_0026427_721_2277 518
72 3300047319 Ga0495674_0000613 Ga0495674_0000613_3849_5405 518
73 3300049570 Ga0501033_0005577 Ga0501033_0005577_6224_7849 518
74 3300049822 Ga0501035_0001599 Ga0501035_0001599_3044_4669 518
75 3300049823 Ga0501044_0001468 Ga0501044_0001468_8071_9696 518
76 3300009174 Ga0105241_10142623 Ga0105241_101426231 519
77 3300006844 Ga0075428_100141475 Ga0075428_1001414752 520
78 3300009094 Ga0111539_10021087 Ga0111539_100210872 520
79 3300045051 Ga0451576_0235010 Ga0451576_0235010_192_1757 520
80 3300050511 nmdc:mga08y16_9818_c1 nmdc:mga08y16_9818_c1_3666_5228 520
81 3300005441 Ga0070700_100062664 Ga0070700_1000626642 521
82 3300005445 Ga0070708_100060879 Ga0070708_1000608792 521
83 3300005844 Ga0068862_100159971 Ga0068862_1001599712 521
84 3300006847 Ga0075431_100039428 Ga0075431_1000394281 521
85 3300009176 Ga0105242_10098619 Ga0105242_100986191 521
86 3300025936 Ga0207670_10140358 Ga0207670_101403581 521
87 3300028563 Ga0265319_1012322 Ga0265319_10123224 521
88 3300035084 Ga0373928_0000142 Ga0373928_0000142_1625_3193 521
89 3300035085 Ga0373929_0000081 Ga0373929_0000081_13435_15003 521
90 3300035089 Ga0373944_0000081 Ga0373944_0000081_14641_16209 521
91 3300035112 Ga0373932_0000003 Ga0373932_0000003_58146_59714 521
92 3300035116 Ga0373945_0019040 Ga0373945_0019040_214_1782 521
93 3300035691 Ga0373931_0000017 Ga0373931_0000017_58004_59572 521
94 3300035725 Ga0373947_0083954 Ga0373947_0083954_335_1903 521
95 3300037068 Ga0373925_0001468 Ga0373925_0001468_13582_15150 521
96 3300046454 Ga0495592_0000054 Ga0495592_0000054_16580_18145 521
97 3300046514 Ga0495618_0017903 Ga0495618_0017903_2512_4077 521
98 3300046516 Ga0495628_0001279 Ga0495628_0001279_15959_17524 521
99 3300046517 Ga0495630_0003500 Ga0495630_0003500_4413_5978 521
100 3300046535 Ga0495586_0000960 Ga0495586_0000960_5366_6931 521
101 3300046678 Ga0495599_0008376 Ga0495599_0008376_450_2015 521
102 3300047319 Ga0495674_0008944 Ga0495674_0008944_5953_7518 521
103 3300050510 nmdc:mga06r32_44018_c1 nmdc:mga06r32_44018_c1_213_1778 521
104 3300005544 Ga0070686_100004699 Ga0070686_1000046992 522
105 3300009094 Ga0111539_10193135 Ga0111539_101931352 523
106 3300036401 Ga0373937_0191849 Ga0373937_0191849_162_1733 523
107 3300042876 Ga0451577_0039564 Ga0451577_0039564_257_1843 524
108 3300044712 Ga0453684_0002720 Ga0453684_0002720_28205_29791 524
109 3300005438 Ga0070701_10052877 Ga0070701_100528772 525
110 3300005444 Ga0070694_100050396 Ga0070694_1000503962 525
111 3300005549 Ga0070704_100007526 Ga0070704_1000075263 525
112 3300009093 Ga0105240_10088224 Ga0105240_100882243 525
113 3300026075 Ga0207708_10059531 Ga0207708_100595312 525

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

5

141

0.98

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

149

376

0.88

PF19303

Anticodon_3

Anticodon binding domain of methionyl tRNA ligase

383

508

0.82

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

246

352

0.8

PF08264

Anticodon_1

Anticodon-binding domain of tRNA ligase

392

518

0.8

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

1

228

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dlp-assembly3.cif.gz_C crystal structure of methionyl-trna synthetase metrs from brucella melitensis bound to selenomethionine 0.9431 2 515
5k0t-assembly2.cif.gz_B crystal structure of methionyl-trna synthetase metrs from brucella melitensis in complex with inhibitor chem 1415 0.9427 2 515
2ct8-assembly2.cif.gz_B crystal structure of aquifex aeolicus methionyl-trna synthetase complexed with trna(met) and methionyl-adenylate anologue 0.9413 1 514
4dlp-assembly3.cif.gz_C crystal structure of methionyl-trna synthetase metrs from brucella melitensis bound to selenomethionine 0.9392 2 515
4dlp-assembly2.cif.gz_B crystal structure of methionyl-trna synthetase metrs from brucella melitensis bound to selenomethionine 0.9356 2 515
ID Description Score Start End Superfamily
2ct8B02 Mainly Beta;Beta Complex;Methionyl-trna Synthetase; domain 2; 0.953 157 227 2.170.220.10
2csxB02 Mainly Beta;Beta Complex;Methionyl-trna Synthetase; domain 2; 0.9496 158 227 2.170.220.10
af_I1LFC1_399_579_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.949 352 515 1.10.730.10
2x1lB02 Mainly Beta;Beta Complex;Methionyl-trna Synthetase; domain 2; 0.9482 157 227 2.170.220.10
2ct8B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9382 1 351 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A7J2TY45-F1-model_v4 Methionine--tRNA ligase 0.9731 3 100 GO:0004825
GO:0005524
GO:0006431
AF-A0A0G1VK72-F1-model_v4 Methionyl/Leucyl tRNA synthetase domain-containing protein 0.9719 2 98 GO:0004825
GO:0005524
GO:0006431
GO:0016020
AF-A0A4P1RXZ6-F1-model_v4 Methionyl-tRNA synthetase 0.9667 301 515 GO:0000049
GO:0004825
GO:0005524
GO:0005829
GO:0006431
GO:0046872
AF-A0A6L7EGG6-F1-model_v4 deleted 0.9614 266 445
AF-A0A0G1FJC4-F1-model_v4 Methionyl-tRNA synthetase 0.9585 1 123 GO:0004825
GO:0005524
GO:0006431

Feature Viewer

pLDDT pTM Quality
91.15 0.9 High
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Predicted Structure (AlphaFold2)

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