F074639

General Info

Members Datasets Scaffolds Average Seq Length
113 87 104 339

Family's Representative Sequence

Representative Sequence 3300031616|Ga0307508_10000100|Ga0307508_1000010019
Length 348
Sequence MKTLILEEAGRIVVSDTAEMPAPKSDEALIRVHRVGVCGTDLHAFRGRQPFFNYPRILGHELGVEVLAIGSEVKNVTVGDRCAVEPYLNCGRCIACERNKPNCCTQLKVLGVHIDGGLREEIVVPAVKLHPSRKLSYDQLALVETLGIGAHAVERAAIEQGEIVAVLGTGPIGLSVIQFALAAGARVIAIDVVASRLAFCRERLGLAASDVIDASTIDVVARLRELTGDNLPTAVFDATGNAGSMATAFSYPAHGGRLVFVGLFNGDVSFNDPNFHRRELTLLASRNSRPDDFRRIIALVETGRVDTTPWITHRAAISDVTSEQFESWTKPEAGVLKAMITVAVGPKI

Samples

Sample ID Description Type Environment
1 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane
2 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
3 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
4 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
5 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
6 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
7 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
8 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
23 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
24 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
25 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
26 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
27 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
28 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
29 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
40 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
41 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
42 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
43 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
44 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
45 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
46 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
47 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
48 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
49 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
50 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
51 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
52 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
53 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
54 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
55 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
56 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
57 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
58 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
59 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
60 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
63 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
66 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
67 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
68 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
69 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
79 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
82 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
83 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
84 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
85 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
86 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
87 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.04
Metatranscriptomes 0
Isolates 7.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.54
Nodule 0
Rhizoplane 3.54
Rhizosphere 76.99
Stem 0
Stem Tuber 0
Unclassified 15.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24033J26618_1000227 3300002155 Bacteria 6464
2 rootH2_10000452 3300003320 Bacteria 89382
3 rootH1_10007357 3300003323 Bacteria 29215
4 Ga0070658_10001226 3300005327 Bacteria 22003
5 Ga0070661_100014603 3300005344 Bacteria 5537
6 Ga0070661_100093411 3300005344 Bacteria 2229
7 Ga0070675_100125279 3300005354 Bacteria 2185
8 Ga0070714_100296085 3300005435 Bacteria 1507
9 Ga0070713_100002217 3300005436 Bacteria 12591
10 Ga0070710_10021478 3300005437 Bacteria 3365
11 Ga0070694_100001968 3300005444 Bacteria 12178
12 Ga0070708_100054555 3300005445 Bacteria 3550
13 Ga0068855_100159302 3300005563 Bacteria 2563
14 Ga0068856_100000888 3300005614 Bacteria 32024
15 Ga0097621_100046081 3300006237 Bacteria 3526
16 Ga0105239_10006346 3300010375 Bacteria 13745
17 Ga0157374_10000036 3300013296 Bacteria 176499
18 Ga0157374_10051685 3300013296 Bacteria 3825
19 Ga0157374_10169601 3300013296 Bacteria 2128
20 Ga0157374_10371261 3300013296 Unclassified 1424
21 Ga0157375_10116309 3300013308 Bacteria 2778
22 Ga0157376_10000519 3300014969 Bacteria 24874
23 Ga0213872_10000651 3300021361 Bacteria 26313
24 Ga0213876_10015725 3300021384 Bacteria 4005
25 Ga0213876_10016476 3300021384 Bacteria 3906
26 Ga0213876_10027366 3300021384 Bacteria 3009
27 Ga0213875_10000042 3300021388 Bacteria 154343
28 Ga0209566_100304 3300025225 Bacteria 44584
29 Ga0207692_10047846 3300025898 Bacteria 2149
30 Ga0207705_10002515 3300025909 Bacteria 14130
31 Ga0207649_10003019 3300025920 Bacteria 9266
32 Ga0207700_10074329 3300025928 Bacteria 2629
33 Ga0207664_10262848 3300025929 Bacteria 1510
34 Ga0207690_10037162 3300025932 Bacteria 3160
35 Ga0207679_10001153 3300025945 Bacteria 16845
36 Ga0207702_10006016 3300026078 Bacteria 10528
37 Ga0207683_10080318 3300026121 Bacteria 2893
38 Ga0265334_10013973 3300028573 Bacteria 3353
39 Ga0265318_10000646 3300028577 Bacteria 23828
40 Ga0265318_10039235 3300028577 Bacteria 1808
41 Ga0307515_10218307 3300028794 Bacteria 1732
42 Ga0265338_10147819 3300028800 Bacteria 1830
43 Ga0265320_10008912 3300031240 Bacteria 6095
44 Ga0265331_10057948 3300031250 Bacteria 1835
45 Ga0307508_10000100 3300031616 Bacteria 102032
46 Ga0265314_10003683 3300031711 Bacteria 14695
47 Ga0307407_10000095 3300031903 Bacteria 29851
48 Ga0307416_100000222 3300032002 Bacteria 30040
49 Ga0307416_100064012 3300032002 Bacteria 3015
50 Ga0307414_10175693 3300032004 Bacteria 1717
51 Ga0307414_10198510 3300032004 Bacteria 1630
52 Ga0307411_10080308 3300032005 Bacteria 2242
53 Ga0395899_0000067 3300037312 Bacteria 202348
54 Ga0395899_0028733 3300037312 Bacteria 4184
55 Ga0395898_0000067 3300037466 Bacteria 255955
56 Ga0395905_0000018 3300037471 Bacteria 369321
57 Ga0395905_0377954 3300037471 Bacteria 1310
58 Ga0436364_0541640 3300037853 Bacteria 1424
59 Ga0436364_0849124 3300037853 Bacteria 213959
60 Ga0395901_0061936 3300038443 Bacteria 3893
61 Ga0436365_0125219 3300039437 Bacteria 8689
62 Ga0436365_0519093 3300039437 Bacteria 3090
63 Ga0436365_0853613 3300039437 Unclassified 2200
64 Ga0436360_0428255 3300039438 Bacteria 1505
65 Ga0436361_0186172 3300039447 Unclassified 3141
66 Ga0436361_0702311 3300039447 Viruses 1922
67 Ga0436361_0972688 3300039447 Unclassified 2275
68 Ga0436361_0990226 3300039447 Bacteria 6403
69 Ga0436363_0148158 3300039450 Bacteria 1953
70 Ga0451577_0032725 3300042876 Bacteria 4686
71 Ga0453684_0000287 3300044712 Bacteria 216926
72 Ga0466971_0000009 3300044719 Bacteria 106790
73 Ga0466957_0002733 3300044842 Bacteria 9544
74 Ga0451576_0001604 3300045051 Bacteria 38019
75 Ga0451576_0002361 3300045051 Bacteria 28450
76 Ga0495637_0100567 3300046520 Bacteria 1130
77 Ga0496101_0052198 3300048904 Unclassified 2948
78 Ga0496104_0392996 3300048907 Bacteria 1299
79 Ga0496114_0037776 3300048917 Bacteria 3995
80 Ga0501031_0002590 3300049568 Bacteria 11528
81 Ga0501032_0001708 3300049569 Bacteria 17361
82 Ga0501032_0057058 3300049569 Bacteria 2624
83 Ga0501032_0072884 3300049569 Bacteria 2288
84 Ga0501033_0000006 3300049570 Bacteria 348953
85 Ga0501033_0000122 3300049570 Bacteria 75161
86 Ga0501033_0116296 3300049570 Bacteria 1943
87 Ga0501034_0002721 3300049571 Bacteria 20816
88 Ga0501036_0122180 3300049572 Bacteria 2199
89 Ga0501037_0000020 3300049573 Bacteria 155468
90 Ga0501038_0000225 3300049574 Bacteria 47939
91 Ga0501038_0076559 3300049574 Bacteria 2826
92 Ga0501043_0000064 3300049579 Bacteria 93899
93 Ga0501043_0000514 3300049579 Bacteria 34829
94 Ga0501047_0001245 3300049581 Bacteria 25234
95 Ga0501070_0001804 3300049586 Bacteria 18885
96 Ga0501070_0343021 3300049586 Bacteria 1213
97 Ga0501035_0000216 3300049822 Bacteria 69506
98 Ga0501044_0000510 3300049823 Bacteria 47224
99 Ga0501044_0257924 3300049823 Unclassified 1682
100 nmdc:mga05p37_556751_c1 3300050507 Bacteria 1304
101 Ga0500555_000836 3300053103 Bacteria 11002
102 Ga0500616_0000188 3300053153 Bacteria 101183
103 Ga0500645_000894 3300053730 Bacteria 17252
104 Ga0466962_0000071 3300061719 Bacteria 41938

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 8046991243 8046999075 272
2 3300048907 Ga0496104_0392996 Ga0496104_0392996_336_1256 304
3 3300039447 Ga0436361_0186172 Ga0436361_0186172_477_1457 326
4 3300028573 Ga0265334_10013973 Ga0265334_100139732 327
5 iso_pu_bacteria 2904755435 2904761129 333
6 iso_pu_bacteria 3006969106 3006971027 333
7 iso_pu_bacteria 8002317523 8002319762 333
8 3300005445 Ga0070708_100054555 Ga0070708_1000545554 334
9 iso_pu_bacteria 2786546517 2787435337 335
10 iso_pu_bacteria 2786546940 2788437322 335
11 iso_pu_bacteria 2919692658 2919697037 335
12 3300037471 Ga0395905_0377954 Ga0395905_0377954_186_1196 336
13 iso_pu_bacteria 2786546548 2787508082 336
14 3300025225 Ga0209566_100304 Ga0209566_10030436 337
15 3300028577 Ga0265318_10039235 Ga0265318_100392352 337
16 3300037312 Ga0395899_0028733 Ga0395899_0028733_2294_3307 337
17 3300046520 Ga0495637_0100567 Ga0495637_0100567_23_1045 337
18 3300049570 Ga0501033_0116296 Ga0501033_0116296_688_1701 337
19 3300049823 Ga0501044_0257924 Ga0501044_0257924_601_1632 337
20 iso_pu_bacteria 2980182181 2980186584 337
21 3300005327 Ga0070658_10001226 Ga0070658_100012269 338
22 3300005444 Ga0070694_100001968 Ga0070694_1000019689 338
23 3300010375 Ga0105239_10006346 Ga0105239_1000634614 338
24 3300013296 Ga0157374_10169601 Ga0157374_101696012 338
25 3300021388 Ga0213875_10000042 Ga0213875_1000004250 338
26 3300025909 Ga0207705_10002515 Ga0207705_1000251510 338
27 3300032002 Ga0307416_100064012 Ga0307416_1000640122 338
28 3300032005 Ga0307411_10080308 Ga0307411_100803082 338
29 3300037853 Ga0436364_0849124 Ga0436364_0849124_150546_151562 338
30 3300048904 Ga0496101_0052198 Ga0496101_0052198_769_1785 338
31 3300048917 Ga0496114_0037776 Ga0496114_0037776_1977_2993 338
32 3300050507 nmdc:mga05p37_556751_c1 nmdc:mga05p37_556751_c1_258_1274 338
33 3300005344 Ga0070661_100093411 Ga0070661_1000934111 339
34 3300005563 Ga0068855_100159302 Ga0068855_1001593022 339
35 3300006237 Ga0097621_100046081 Ga0097621_1000460812 339
36 3300013296 Ga0157374_10000036 Ga0157374_1000003615 339
37 3300013296 Ga0157374_10371261 Ga0157374_103712612 339
38 3300014969 Ga0157376_10000519 Ga0157376_100005197 339
39 3300021384 Ga0213876_10016476 Ga0213876_100164762 339
40 3300021384 Ga0213876_10027366 Ga0213876_100273662 339
41 3300025945 Ga0207679_10001153 Ga0207679_100011539 339
42 3300028577 Ga0265318_10000646 Ga0265318_1000064619 339
43 3300028794 Ga0307515_10218307 Ga0307515_102183072 339
44 3300028800 Ga0265338_10147819 Ga0265338_101478192 339
45 3300031240 Ga0265320_10008912 Ga0265320_100089123 339
46 3300031250 Ga0265331_10057948 Ga0265331_100579481 339
47 3300031616 Ga0307508_10000100 Ga0307508_1000010019 339
48 3300031711 Ga0265314_10003683 Ga0265314_100036836 339
49 3300031903 Ga0307407_10000095 Ga0307407_1000009522 339
50 3300032002 Ga0307416_100000222 Ga0307416_10000022210 339
51 3300032004 Ga0307414_10175693 Ga0307414_101756932 339
52 3300032004 Ga0307414_10198510 Ga0307414_101985102 339
53 3300037471 Ga0395905_0000018 Ga0395905_0000018_262717_263748 339
54 3300038443 Ga0395901_0061936 Ga0395901_0061936_2266_3285 339
55 3300039437 Ga0436365_0519093 Ga0436365_0519093_264_1283 339
56 3300042876 Ga0451577_0032725 Ga0451577_0032725_112_1149 339
57 3300044712 Ga0453684_0000287 Ga0453684_0000287_121043_122080 339
58 3300045051 Ga0451576_0001604 Ga0451576_0001604_10974_12017 339
59 3300045051 Ga0451576_0002361 Ga0451576_0002361_13970_15013 339
60 3300049569 Ga0501032_0001708 Ga0501032_0001708_9528_10550 339
61 3300049570 Ga0501033_0000006 Ga0501033_0000006_113031_114053 339
62 3300049571 Ga0501034_0002721 Ga0501034_0002721_11360_12433 339
63 3300049586 Ga0501070_0343021 Ga0501070_0343021_113_1135 339
64 3300053103 Ga0500555_000836 Ga0500555_000836_2958_3986 339
65 3300053153 Ga0500616_0000188 Ga0500616_0000188_20846_21874 339
66 3300053730 Ga0500645_000894 Ga0500645_000894_9036_10064 339
67 3300002155 JGI24033J26618_1000227 JGI24033J26618_10002272 340
68 3300003320 rootH2_10000452 rootH2_1000045236 340
69 3300003323 rootH1_10007357 rootH1_100073577 340
70 3300005344 Ga0070661_100014603 Ga0070661_1000146035 340
71 3300005354 Ga0070675_100125279 Ga0070675_1001252792 340
72 3300005435 Ga0070714_100296085 Ga0070714_1002960852 340
73 3300005436 Ga0070713_100002217 Ga0070713_10000221714 340
74 3300005437 Ga0070710_10021478 Ga0070710_100214783 340
75 3300005614 Ga0068856_100000888 Ga0068856_1000008882 340
76 3300013296 Ga0157374_10051685 Ga0157374_100516852 340
77 3300013308 Ga0157375_10116309 Ga0157375_101163093 340
78 3300021361 Ga0213872_10000651 Ga0213872_100006512 340
79 3300021384 Ga0213876_10015725 Ga0213876_100157253 340
80 3300025898 Ga0207692_10047846 Ga0207692_100478462 340
81 3300025920 Ga0207649_10003019 Ga0207649_100030195 340
82 3300025928 Ga0207700_10074329 Ga0207700_100743292 340
83 3300025929 Ga0207664_10262848 Ga0207664_102628481 340
84 3300025932 Ga0207690_10037162 Ga0207690_100371624 340
85 3300026078 Ga0207702_10006016 Ga0207702_100060162 340
86 3300026121 Ga0207683_10080318 Ga0207683_100803183 340
87 3300037312 Ga0395899_0000067 Ga0395899_0000067_42841_43863 340
88 3300037466 Ga0395898_0000067 Ga0395898_0000067_173389_174411 340
89 3300037853 Ga0436364_0541640 Ga0436364_0541640_145_1167 340
90 3300039437 Ga0436365_0125219 Ga0436365_0125219_6271_7293 340
91 3300039437 Ga0436365_0853613 Ga0436365_0853613_992_2014 340
92 3300039438 Ga0436360_0428255 Ga0436360_0428255_202_1284 340
93 3300039447 Ga0436361_0702311 Ga0436361_0702311_393_1475 340
94 3300039447 Ga0436361_0972688 Ga0436361_0972688_624_1646 340
95 3300039447 Ga0436361_0990226 Ga0436361_0990226_5045_6067 340
96 3300039450 Ga0436363_0148158 Ga0436363_0148158_877_1899 340
97 3300044719 Ga0466971_0000009 Ga0466971_0000009_64688_65710 340
98 3300044842 Ga0466957_0002733 Ga0466957_0002733_2433_3455 340
99 3300049568 Ga0501031_0002590 Ga0501031_0002590_5928_6950 340
100 3300049569 Ga0501032_0057058 Ga0501032_0057058_1105_2127 340
101 3300049569 Ga0501032_0072884 Ga0501032_0072884_479_1501 340
102 3300049570 Ga0501033_0000122 Ga0501033_0000122_51615_52637 340
103 3300049572 Ga0501036_0122180 Ga0501036_0122180_938_1960 340
104 3300049573 Ga0501037_0000020 Ga0501037_0000020_51281_52303 340
105 3300049574 Ga0501038_0000225 Ga0501038_0000225_44862_45884 340
106 3300049574 Ga0501038_0076559 Ga0501038_0076559_90_1112 340
107 3300049579 Ga0501043_0000064 Ga0501043_0000064_72945_73967 340
108 3300049579 Ga0501043_0000514 Ga0501043_0000514_24628_25650 340
109 3300049581 Ga0501047_0001245 Ga0501047_0001245_4256_5278 340
110 3300049586 Ga0501070_0001804 Ga0501070_0001804_5505_6527 340
111 3300049822 Ga0501035_0000216 Ga0501035_0000216_20650_21672 340
112 3300049823 Ga0501044_0000510 Ga0501044_0000510_2381_3403 340
113 3300061719 Ga0466962_0000071 Ga0466962_0000071_596_1618 340

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

171

302

0.97

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

24

134

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ilk-assembly1.cif.gz_A crystal structure of short chain alcohol dehydrogenase (rspb) from e. coli cft073 (efi target efi-506413) complexed with cofactor nadh 0.9397 1 340
4ilk-assembly1.cif.gz_B crystal structure of short chain alcohol dehydrogenase (rspb) from e. coli cft073 (efi target efi-506413) complexed with cofactor nadh 0.935 1 340
3s2i-assembly2.cif.gz_H crystal structure of furx nadh+:furfuryl alcohol ii 0.9311 1 340
4ilk-assembly1.cif.gz_A crystal structure of short chain alcohol dehydrogenase (rspb) from e. coli cft073 (efi target efi-506413) complexed with cofactor nadh 0.929 1 340
3m6i-assembly1.cif.gz_A l-arabinitol 4-dehydrogenase 0.9278 2 340
ID Description Score Start End Superfamily
af_P39400_150_283_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9744 150 283 3.40.50.720
af_P39400_4_147_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9736 1 143 3.90.180.10
af_Q54H99_9_164_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9677 162 195 3.50.50.60
af_P39400_150_283_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9602 150 283 3.40.50.720
af_P39400_4_147_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9473 1 143 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A3D4B4X7-F1-model_v4 Alcohol dehydrogenase 0.9836 74 339 GO:0016491
AF-A0A4V1SKM5-F1-model_v4 deleted 0.9799 58 339
AF-A0A520CV55-F1-model_v4 Alcohol dehydrogenase 0.9785 142 339 GO:0016491
GO:0046872
AF-A0A3D2Z9V2-F1-model_v4 Alcohol dehydrogenase 0.9779 1 309 GO:0016491
AF-A0A7X1NIK6-F1-model_v4 Alcohol dehydrogenase catalytic domain-containing protein 0.9736 1 340 GO:0016491

Feature Viewer

pLDDT pTM Quality
95.92 0.92 High
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Predicted Structure (AlphaFold2)

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