F074909

General Info

Members Datasets Scaffolds Average Seq Length
113 95 226 386

Family's Representative Sequence

Representative Sequence 3300037312|Ga0395899_0010564|Ga0395899_0010564_3281_4573
Length 430
Sequence LISAILDRVRAQSAMEREQVMAAVPSSEAKAAGTWPEVLMAFLRLGLTSFGGPVAHLGYFRQDIVERRRWLDERAFVDLIALCQFLPGPASSQVGIGIGLYRAGLAGALAAWVGFTLPSALALVLFASGVEAIGGSLGSGWLHGLKIAAVAVVALAVWGMARSMANDRPRATLAVAATLLVFAVPGATGQLGAILLGAIAGMVLLRGDSDERARSPTSLGHGRALGAVCLVVFFLLLIGLPVAAAHWPRQDLAVASAFYRAGSLVFGGGHVVLPLLRAMVVPPGWVSDNLFLAGYGAAQAVPGPLFTFSAYLGFVLDRPPDGWAGAALCLCAIFLPSFLLVIGALPFWDRLRGRRGAQAALRGVNAAVVGLLLAALYDPVWKSAISTAGDFALAAVALVMLAAWKAPPWLVVIVCALGGAGLAHLQGGLP

Samples

Sample ID Description Type Environment
1 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
34 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
35 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
36 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
45 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
49 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
50 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
51 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
52 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
53 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
54 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
55 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
58 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
59 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
60 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
61 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
62 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
65 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
66 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
67 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
68 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
69 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
70 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
71 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
72 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
73 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
74 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
75 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
76 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
77 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
78 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
79 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
80 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
85 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
86 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
87 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
88 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
89 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
90 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
91 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
92 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
93 2524614857 Deinococcus ficus DSM 19119 Isolate Rhizosphere
94 2643221583 Caulobacter sp. Root655 Isolate Unclassified
95 2739367875 Deinococcus ficus CC-FR2-10 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.58
Metatranscriptomes 0.88
Isolates 3.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.65
Nodule 0
Rhizoplane 0
Rhizosphere 92.92
Stem 0
Stem Tuber 0
Unclassified 2.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395899_0010564 3300037312 Bacteria 7074
2 LJNas_1000161 3300000546 Bacteria 10916
3 JGI24739J22299_10016537 3300001989 Bacteria 2668
4 JGI25151J46595_10002218 3300003187 Bacteria 12001
5 Ga0070658_10105476 3300005327 Bacteria 2331
6 Ga0070691_10007420 3300005341 Bacteria 5024
7 Ga0070667_100072277 3300005367 Bacteria 2939
8 Ga0070705_100020708 3300005440 Bacteria 3486
9 Ga0068867_100088095 3300005459 Bacteria 2352
10 Ga0070698_100035953 3300005471 Bacteria 5120
11 Ga0070699_100029276 3300005518 Bacteria 4748
12 Ga0070679_100150078 3300005530 Bacteria 2308
13 Ga0068853_100035839 3300005539 Bacteria 4216
14 Ga0070695_100002317 3300005545 Bacteria 10919
15 Ga0070665_100000387 3300005548 Bacteria 64945
16 Ga0070665_100260319 3300005548 Bacteria 1736
17 Ga0068855_100000578 3300005563 Bacteria 44980
18 Ga0068857_100052133 3300005577 Bacteria 3630
19 Ga0068856_100026084 3300005614 Bacteria 5698
20 Ga0068852_100161812 3300005616 Bacteria 2090
21 Ga0068859_100161131 3300005617 Bacteria 2322
22 Ga0068858_100108667 3300005842 Bacteria 2589
23 Ga0081455_10044497 3300005937 Bacteria 3872
24 Ga0081455_10173223 3300005937 Bacteria 1641
25 Ga0081538_10000049 3300005981 Bacteria 110906
26 Ga0075428_100087922 3300006844 Bacteria 3390
27 Ga0075430_100051725 3300006846 Bacteria 3461
28 Ga0075431_100217450 3300006847 Bacteria 1950
29 Ga0075431_100368754 3300006847 Bacteria 1441
30 Ga0097620_100161148 3300006931 Bacteria 2322
31 Ga0105240_10006483 3300009093 Bacteria 17188
32 Ga0105240_10055996 3300009093 Unclassified 4935
33 Ga0105240_10297096 3300009093 Bacteria 1849
34 Ga0105245_10082492 3300009098 Bacteria 2941
35 Ga0105245_10398474 3300009098 Bacteria 1375
36 Ga0105248_10096001 3300009177 Bacteria 3338
37 Ga0105238_10151562 3300009551 Unclassified 2293
38 Ga0105238_10192679 3300009551 Bacteria 2014
39 Ga0157370_10007530 3300013104 Bacteria 11828
40 Ga0182008_10003941 3300014497 Bacteria 8786
41 Ga0213875_10001964 3300021388 Bacteria 12725
42 Ga0209025_1000136 3300025294 Bacteria 190335
43 Ga0207695_10009603 3300025913 Bacteria 11944
44 Ga0207695_10165634 3300025913 Bacteria 2139
45 Ga0207711_10132446 3300025941 Bacteria 2236
46 Ga0207689_10036189 3300025942 Bacteria 4098
47 Ga0207667_10027462 3300025949 Bacteria 6195
48 Ga0207667_10066939 3300025949 Bacteria 3743
49 Ga0207703_10006551 3300026035 Bacteria 9285
50 Ga0207702_10278016 3300026078 Bacteria 1582
51 Ga0207674_10108810 3300026116 Bacteria 2748
52 Ga0207698_10138132 3300026142 Bacteria 2094
53 Ga0207698_10222410 3300026142 Bacteria 1707
54 Ga0265354_1002363 3300028016 Bacteria 2357
55 Ga0268266_10000607 3300028379 Bacteria 48767
56 Ga0265323_10004519 3300028653 Bacteria 5994
57 Ga0265338_10114841 3300028800 Bacteria 2160
58 Ga0265760_10004043 3300031090 Bacteria 4231
59 Ga0265330_10000054 3300031235 Bacteria 101420
60 Ga0265332_10000002 3300031238 Bacteria 709510
61 Ga0265332_10001119 3300031238 Bacteria 15625
62 Ga0265328_10002779 3300031239 Bacteria 7833
63 Ga0265328_10053773 3300031239 Bacteria 1477
64 Ga0265340_10003957 3300031247 Bacteria 8332
65 Ga0265339_10007662 3300031249 Bacteria 6952
66 Ga0265339_10007924 3300031249 Bacteria 6813
67 Ga0265331_10011459 3300031250 Bacteria 4855
68 Ga0265316_10070072 3300031344 Bacteria 2705
69 Ga0265314_10000012 3300031711 Bacteria 415184
70 Ga0265314_10093903 3300031711 Bacteria 1946
71 Ga0265342_10000110 3300031712 Bacteria 91145
72 Ga0265342_10042261 3300031712 Bacteria 2755
73 Ga0307412_10042105 3300031911 Bacteria 2964
74 Ga0307416_100024623 3300032002 Bacteria 4398
75 Ga0307411_10043454 3300032005 Bacteria 2875
76 Ga0373936_0032662 3300035113 Unclassified 2059
77 Ga0373943_0064292 3300035170 Bacteria 1842
78 Ga0395900_0050356 3300037418 Bacteria 4290
79 Ga0395900_0120259 3300037418 Bacteria 2695
80 Ga0436364_0441644 3300037853 Bacteria 5681
81 Ga0436361_0207229 3300039447 Bacteria 16890
82 Ga0439466_0029839 3300041411 Bacteria 1874
83 Ga0466969_0003847 3300044656 Bacteria 7971
84 Ga0466959_0006691 3300045049 Bacteria 8016
85 Ga0466959_0044874 3300045049 Bacteria 3256
86 Ga0495627_000650 3300046453 Bacteria 26905
87 Ga0495638_0021283 3300046460 Bacteria 4276
88 Ga0495584_0001800 3300046491 Bacteria 12469
89 Ga0495606_0071356 3300046507 Bacteria 2187
90 Ga0495618_0121542 3300046514 Bacteria 1673
91 Ga0495628_0022244 3300046516 Bacteria 5210
92 Ga0495645_0005860 3300046543 Bacteria 8484
93 Ga0495671_0005896 3300046692 Bacteria 7129
94 Ga0495673_0000078 3300047469 Bacteria 203066
95 Ga0495593_0060335 3300047673 Bacteria 1986
96 Ga0496126_0026255 3300048929 Bacteria 5587
97 Ga0501034_0041381 3300049571 Bacteria 4662
98 Ga0501040_0023876 3300049576 Bacteria 4100
99 Ga0501043_0032342 3300049579 Bacteria 4113
100 Ga0501047_0000825 3300049581 Bacteria 32128
101 Ga0501072_0106022 3300049588 Bacteria 2235
102 Ga0501257_000008 3300049686 Bacteria 54624
103 Ga0501083_0193869 3300049744 Bacteria 1326
104 nmdc:mga0qj67_37376_c1 3300050509 Bacteria 3803
105 nmdc:mga06r32_129471_c1 3300050510 Bacteria 2494
106 nmdc:mga06r32_424193_c1 3300050510 Bacteria 1311
107 Ga0500577_0002201 3300053142 Bacteria 4986
108 Ga0501082_0034149 3300060353 Bacteria 4388
109 Ga0530510_0073205 3300061734 Bacteria 2487
110 2511120396 2510917020 Bacteria 5657507
111 2526062437 2524614857 Bacteria 4146328
112 2643924804 2643221583 Bacteria 5218014
113 2740063785 2739367875 Bacteria 4157290
114 Ga0395899_0010564
115 LJNas_1000161
116 JGI24739J22299_10016537
117 JGI25151J46595_10002218
118 Ga0070658_10105476
119 Ga0070691_10007420
120 Ga0070667_100072277
121 Ga0070705_100020708
122 Ga0068867_100088095
123 Ga0070698_100035953
124 Ga0070699_100029276
125 Ga0070679_100150078
126 Ga0068853_100035839
127 Ga0070695_100002317
128 Ga0070665_100000387
129 Ga0070665_100260319
130 Ga0068855_100000578
131 Ga0068857_100052133
132 Ga0068856_100026084
133 Ga0068852_100161812
134 Ga0068859_100161131
135 Ga0068858_100108667
136 Ga0081455_10044497
137 Ga0081455_10173223
138 Ga0081538_10000049
139 Ga0075428_100087922
140 Ga0075430_100051725
141 Ga0075431_100217450
142 Ga0075431_100368754
143 Ga0097620_100161148
144 Ga0105240_10006483
145 Ga0105240_10055996
146 Ga0105240_10297096
147 Ga0105245_10082492
148 Ga0105245_10398474
149 Ga0105248_10096001
150 Ga0105238_10151562
151 Ga0105238_10192679
152 Ga0157370_10007530
153 Ga0182008_10003941
154 Ga0213875_10001964
155 Ga0209025_1000136
156 Ga0207695_10009603
157 Ga0207695_10165634
158 Ga0207711_10132446
159 Ga0207689_10036189
160 Ga0207667_10027462
161 Ga0207667_10066939
162 Ga0207703_10006551
163 Ga0207702_10278016
164 Ga0207674_10108810
165 Ga0207698_10138132
166 Ga0207698_10222410
167 Ga0265354_1002363
168 Ga0268266_10000607
169 Ga0265323_10004519
170 Ga0265338_10114841
171 Ga0265760_10004043
172 Ga0265330_10000054
173 Ga0265332_10000002
174 Ga0265332_10001119
175 Ga0265328_10002779
176 Ga0265328_10053773
177 Ga0265340_10003957
178 Ga0265339_10007662
179 Ga0265339_10007924
180 Ga0265331_10011459
181 Ga0265316_10070072
182 Ga0265314_10000012
183 Ga0265314_10093903
184 Ga0265342_10000110
185 Ga0265342_10042261
186 Ga0307412_10042105
187 Ga0307416_100024623
188 Ga0307411_10043454
189 Ga0373936_0032662
190 Ga0373943_0064292
191 Ga0395900_0050356
192 Ga0395900_0120259
193 Ga0436364_0441644
194 Ga0436361_0207229
195 Ga0439466_0029839
196 Ga0466969_0003847
197 Ga0466959_0006691
198 Ga0466959_0044874
199 Ga0495627_000650
200 Ga0495638_0021283
201 Ga0495584_0001800
202 Ga0495606_0071356
203 Ga0495618_0121542
204 Ga0495628_0022244
205 Ga0495645_0005860
206 Ga0495671_0005896
207 Ga0495673_0000078
208 Ga0495593_0060335
209 Ga0496126_0026255
210 Ga0501034_0041381
211 Ga0501040_0023876
212 Ga0501043_0032342
213 Ga0501047_0000825
214 Ga0501072_0106022
215 Ga0501257_000008
216 Ga0501083_0193869
217 nmdc:mga0qj67_37376_c1
218 nmdc:mga06r32_129471_c1
219 nmdc:mga06r32_424193_c1
220 Ga0500577_0002201
221 Ga0501082_0034149
222 Ga0530510_0073205
223 2511120396
224 2526062437
225 2643924804
226 2740063785

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02417

Chromate_transp

Chromate transporter

252

420

0.92

PF02417

Chromate_transp

Chromate transporter

36

202

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7lhv-assembly1.cif.gz_B structure of arabidopsis thaliana sulfate transporter atsultr4;1 0.3802 17 346
7lhv-assembly1.cif.gz_B structure of arabidopsis thaliana sulfate transporter atsultr4;1 0.3621 17 346
3qe7-assembly1.cif.gz_A crystal structure of uracil transporter--uraa 0.2854 2 345
3qe7-assembly1.cif.gz_A crystal structure of uracil transporter--uraa 0.2803 2 345
5x9h-assembly1.cif.gz_A crystal structure of the mg2+ channel mgte in complex with atp 0.2731 177 313
ID Description Score Start End Superfamily
af_Q9VTL9_350_552_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3506 177 301 1.20.1250.20
af_Q54G39_363_560_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3432 177 299 1.20.1250.20
af_P76103_4_381_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.2567 2 346 1.20.1740.10
af_P76103_4_381_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.2527 2 346 1.20.1740.10
af_Q8RWF4_3_311_1.20.1280.290 Mainly Alpha;Up-down Bundle;Monooxygenase; 0.248 2 343 1.20.1280.290
ID Description Score Start End GO Terms
AF-A0A2S5LP15-F1-model_v4 Chromate transporter 0.9822 2 83 GO:0005886
GO:0015109
AF-A0A4Q3VU98-F1-model_v4 Chromate transporter 0.9703 2 85 GO:0005886
GO:0015109
AF-A0A537J2Z7-F1-model_v4 Chromate transporter 0.9672 2 82 GO:0005886
GO:0015109
AF-A0A3B9KJ06-F1-model_v4 Chromate transporter 0.9634 2 82 GO:0005886
GO:0015109
AF-A0A6J4U6F8-F1-model_v4 Chromate transport protein ChrA 0.9619 2 85 GO:0005886
GO:0015109

Map