F075694

General Info

Members Datasets Scaffolds Average Seq Length
113 103 81 547

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0156337|Ga0496104_0156337_36_1775
Length 579
Sequence MTNSSTDDDVQESVGRSPSADTAPTAVDRISNQFVVDLCLLSPMAAIQLGRARPGDASLDDLSPAGLKRTRDLASATLVAVKAAADETEGDALARSILSERVGLEIDKVDSGWAEADLNVIASPVQHLRMIFDVMPKGSDEDWDAIAKRMTALPEALAGYRASLESAAGRGQVAAQRQIDKCAEQCATFAGLADRPGFFTDLAASAERSGALGDDLTRGAAVAQDAYREFGGFLTETLRARAPEKDAVGRDRYALASREFLGATVDLEETYAWGWQEFLSIEAELREVAERIAPGAGPRGASAALDADPAHQAHGQDGFVAWMQDISDRAVEELGRTHFAIDGPMQRLDCRIAPPGGGVGAYYMQPSDDFSRPGIMWFSVEQGRETFSTWRETTVVYHEGVPGHHLQLATQVYQRDSLNDFQRLIAGTSGHAEGWALYAERLVRELGYLDEDGVLLGMLDSQLFRAARVIVDIGMHLELPIPAGTGFHEGERWTPELGLDFLLERTVSDPVHCRDEIDRYLGWPGQAPSYKIGERVWLAGRDAARQRHGAEFDLKAFHTAALRMGGMGLDPLAEQLALL

Samples

Sample ID Description Type Environment
1 2558860280 Kutzneria sp. 744 Isolate Unclassified
2 2582580736 Prauserella sp. Am3 Isolate Unclassified
3 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
4 2643221566 Microbacterium sp. Root166 Isolate Unclassified
5 2643221692 Nocardia sp. Root136 Isolate Unclassified
6 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
7 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
8 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
9 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
10 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
11 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
12 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
13 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
14 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
15 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
16 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
17 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
18 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
19 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
20 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
21 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
22 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
23 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
24 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
25 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
26 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
27 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
28 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
30 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
31 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
47 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
57 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
58 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
59 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
62 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
63 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
64 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
65 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
66 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
67 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
68 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
69 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
70 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
71 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
72 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
73 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
74 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
75 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
78 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
79 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
80 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
81 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
82 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
83 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
84 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
85 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
86 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
87 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
88 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
89 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
90 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
91 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
92 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
93 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
96 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
99 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
100 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
101 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
102 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
103 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.68
Metatranscriptomes 0
Isolates 28.32

Biome Distribution

Category Percentage (%)
Aerial Root 1.77
Bulb 0
Endosphere 3.54
Nodule 0
Rhizoplane 12.39
Rhizosphere 56.64
Stem 0
Stem Tuber 0.88
Unclassified 24.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000734 3300003203 Bacteria 15309
2 Ga0070668_100009490 3300005347 Bacteria 7218
3 Ga0070714_100027459 3300005435 Bacteria 4714
4 Ga0070713_100006623 3300005436 Bacteria 8054
5 Ga0070663_100000461 3300005455 Bacteria 21530
6 Ga0070706_100006670 3300005467 Bacteria 10891
7 Ga0070698_100002469 3300005471 Bacteria 20409
8 Ga0070698_100003882 3300005471 Bacteria 16433
9 Ga0070699_100102150 3300005518 Bacteria 2514
10 Ga0068853_100001738 3300005539 Bacteria 15965
11 Ga0070665_100128932 3300005548 Bacteria 2532
12 Ga0068852_100076242 3300005616 Bacteria 2960
13 Ga0068851_10055475 3300005834 Bacteria 2019
14 Ga0081455_10000660 3300005937 Bacteria 44685
15 Ga0081539_10000242 3300005985 Bacteria 127897
16 Ga0070717_10004138 3300006028 Bacteria 10460
17 Ga0075364_10097179 3300006051 Bacteria 1959
18 Ga0075431_100132139 3300006847 Bacteria 2574
19 Ga0105243_10031856 3300009148 Bacteria 4068
20 Ga0171462_1002 3300013250 Bacteria 1052134
21 Ga0207692_10000936 3300025898 Bacteria 10582
22 Ga0207684_10000144 3300025910 Bacteria 127105
23 Ga0207646_10001199 3300025922 Bacteria 32633
24 Ga0207694_10020650 3300025924 Bacteria 4986
25 Ga0207700_10109987 3300025928 Bacteria 2216
26 Ga0207664_10018684 3300025929 Bacteria 5109
27 Ga0207665_10046890 3300025939 Bacteria 2896
28 Ga0207668_10042792 3300025972 Bacteria 3069
29 Ga0207678_10002129 3300026067 Bacteria 17923
30 Ga0307515_10133551 3300028794 Bacteria 2715
31 Ga0307511_10000482 3300030521 Bacteria 43322
32 Ga0307512_10006083 3300030522 Bacteria 12350
33 Ga0314311_1031414 3300030733 Bacteria 3210
34 Ga0265327_10005267 3300031251 Bacteria 10893
35 Ga0307513_10033150 3300031456 Bacteria 5809
36 Ga0307413_10003546 3300031824 Bacteria 6598
37 Ga0307518_10000154 3300031838 Bacteria 50652
38 Ga0307411_10080546 3300032005 Bacteria 2239
39 Ga0307510_10055517 3300033180 Bacteria 4136
40 Ga0373956_0000616 3300035119 Bacteria 14582
41 Ga0436364_0801129 3300037853 Bacteria 53590
42 Ga0451791_0041293 3300041451 Bacteria 7232
43 Ga0439449_0011598 3300042007 Bacteria 3314
44 Ga0466969_0003171 3300044656 Bacteria 8759
45 Ga0466972_0020040 3300044658 Bacteria 3343
46 Ga0466965_0003740 3300044683 Bacteria 6715
47 Ga0466966_0039590 3300044684 Bacteria 3036
48 Ga0466970_0000099 3300044765 Bacteria 37481
49 Ga0466970_0008220 3300044765 Bacteria 5241
50 Ga0466960_0010132 3300044901 Bacteria 3908
51 Ga0466967_0000392 3300045976 Bacteria 20495
52 Ga0466967_0002075 3300045976 Bacteria 12263
53 Ga0466967_0030314 3300045976 Bacteria 4538
54 Ga0495651_0000401 3300046462 Bacteria 33487
55 Ga0495608_0045795 3300046511 Bacteria 2913
56 Ga0495628_0016745 3300046516 Bacteria 6112
57 Ga0495647_0042781 3300046681 Bacteria 1731
58 Ga0495600_0015290 3300046809 Bacteria 4850
59 Ga0495581_0072999 3300047315 Bacteria 1986
60 Ga0495604_0008383 3300047317 Bacteria 8174
61 Ga0496101_0140211 3300048904 Bacteria 1842
62 Ga0496104_0156337 3300048907 Bacteria 2188
63 Ga0496108_0023803 3300048911 Bacteria 5039
64 Ga0496109_0005051 3300048912 Bacteria 11027
65 Ga0496109_0033548 3300048912 Bacteria 4618
66 Ga0496109_0050045 3300048912 Bacteria 3806
67 Ga0496110_0011701 3300048913 Bacteria 7196
68 Ga0496111_0002604 3300048914 Bacteria 10920
69 Ga0496112_0018714 3300048915 Bacteria 6528
70 Ga0496113_0042634 3300048916 Bacteria 3354
71 Ga0496114_0000468 3300048917 Bacteria 29550
72 Ga0496114_0001113 3300048917 Bacteria 20314
73 Ga0496114_0073314 3300048917 Bacteria 2881
74 Ga0496119_0002137 3300048922 Bacteria 22251
75 Ga0501038_0007780 3300049574 Bacteria 9874
76 Ga0501070_0014093 3300049586 Bacteria 6731
77 Ga0501075_0102777 3300049591 Bacteria 2171
78 Ga0501044_0137197 3300049823 Bacteria 2437
79 nmdc:mga00v17_85657_c1 3300050491 Bacteria 1973
80 Ga0500559_0001799 3300053136 Bacteria 11758
81 Ga0500559_0004860 3300053136 Bacteria 6269

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037853 Ga0436364_0801129 Ga0436364_0801129_52138_53565 451
2 3300049574 Ga0501038_0007780 Ga0501038_0007780_6059_7732 459
3 3300005436 Ga0070713_100006623 Ga0070713_1000066234 473
4 3300025929 Ga0207664_10018684 Ga0207664_100186844 473
5 3300044765 Ga0466970_0000099 Ga0466970_0000099_5339_7024 474
6 3300006028 Ga0070717_10004138 Ga0070717_100041385 477
7 3300005471 Ga0070698_100003882 Ga0070698_1000038828 505
8 3300025898 Ga0207692_10000936 Ga0207692_1000093610 512
9 3300005539 Ga0068853_100001738 Ga0068853_1000017387 514
10 3300005616 Ga0068852_100076242 Ga0068852_1000762422 514
11 3300005834 Ga0068851_10055475 Ga0068851_100554751 514
12 3300025924 Ga0207694_10020650 Ga0207694_100206503 514
13 3300045976 Ga0466967_0030314 Ga0466967_0030314_550_2115 516
14 3300048912 Ga0496109_0005051 Ga0496109_0005051_6685_8250 516
15 3300045976 Ga0466967_0002075 Ga0466967_0002075_1738_3306 517
16 3300005518 Ga0070699_100102150 Ga0070699_1001021502 521
17 3300048904 Ga0496101_0140211 Ga0496101_0140211_15_1730 521
18 3300048917 Ga0496114_0000468 Ga0496114_0000468_14367_16082 521
19 3300031838 Ga0307518_10000154 Ga0307518_1000015426 523
20 3300006847 Ga0075431_100132139 Ga0075431_1001321391 525
21 3300035119 Ga0373956_0000616 Ga0373956_0000616_4882_6588 525
22 3300044656 Ga0466969_0003171 Ga0466969_0003171_3606_5288 527
23 3300044765 Ga0466970_0008220 Ga0466970_0008220_746_2428 527
24 3300005435 Ga0070714_100027459 Ga0070714_1000274593 528
25 3300025928 Ga0207700_10109987 Ga0207700_101099872 528
26 3300044684 Ga0466966_0039590 Ga0466966_0039590_1190_2869 528
27 3300046681 Ga0495647_0042781 Ga0495647_0042781_31_1647 528
28 3300047315 Ga0495581_0072999 Ga0495581_0072999_247_1923 530
29 3300048911 Ga0496108_0023803 Ga0496108_0023803_217_1893 530
30 3300048912 Ga0496109_0033548 Ga0496109_0033548_2726_4402 530
31 3300048913 Ga0496110_0011701 Ga0496110_0011701_3710_5386 530
32 3300048914 Ga0496111_0002604 Ga0496111_0002604_1657_3333 530
33 3300048916 Ga0496113_0042634 Ga0496113_0042634_31_1707 530
34 3300005467 Ga0070706_100006670 Ga0070706_1000066703 531
35 3300005471 Ga0070698_100002469 Ga0070698_10000246920 531
36 3300025910 Ga0207684_10000144 Ga0207684_1000014492 531
37 3300025922 Ga0207646_10001199 Ga0207646_1000119919 531
38 3300044658 Ga0466972_0020040 Ga0466972_0020040_42_1694 533
39 3300044683 Ga0466965_0003740 Ga0466965_0003740_5023_6675 533
40 3300030733 Ga0314311_1031414 Ga0314311_10314142 537
41 3300045976 Ga0466967_0000392 Ga0466967_0000392_15910_17589 537
42 3300048922 Ga0496119_0002137 Ga0496119_0002137_20352_22007 537
43 3300049586 Ga0501070_0014093 Ga0501070_0014093_3794_5449 537
44 3300013250 Ga0171462_1002 Ga0171462_1002873 538
45 iso_pu_bacteria 2558860280 2559431118 538
46 iso_pu_bacteria 2643221566 2643846616 538
47 iso_pu_bacteria 8045830549 8045834032 538
48 iso_pu_bacteria 2808606447 2809228328 540
49 iso_pu_bacteria 2852632344 2852634990 540
50 3300005548 Ga0070665_100128932 Ga0070665_1001289322 541
51 3300006051 Ga0075364_10097179 Ga0075364_100971791 541
52 3300031251 Ga0265327_10005267 Ga0265327_100052673 541
53 3300048915 Ga0496112_0018714 Ga0496112_0018714_3761_5410 541
54 3300050491 nmdc:mga00v17_85657_c1 nmdc:mga00v17_85657_c1_22_1704 541
55 iso_pu_bacteria 2582580736 2583150658 541
56 iso_pu_bacteria 2811994872 2812324350 541
57 iso_pu_bacteria 2821268502 2821271063 541
58 iso_pu_bacteria 2791354901 2791912636 542
59 iso_pu_bacteria 2899370129 2899371824 542
60 iso_pu_bacteria 2643221692 2644517688 543
61 iso_pu_bacteria 2866612099 2866615122 543
62 3300053136 Ga0500559_0004860 Ga0500559_0004860_2121_3782 544
63 iso_pu_bacteria 2984576629 2984580589 544
64 iso_pu_bacteria 2990256926 2990258281 544
65 3300005937 Ga0081455_10000660 Ga0081455_1000066034 545
66 iso_pu_bacteria 2795385472 2795794186 545
67 3300005455 Ga0070663_100000461 Ga0070663_10000046120 546
68 3300025939 Ga0207665_10046890 Ga0207665_100468902 546
69 3300026067 Ga0207678_10002129 Ga0207678_100021295 546
70 3300046462 Ga0495651_0000401 Ga0495651_0000401_26074_27843 546
71 3300046516 Ga0495628_0016745 Ga0495628_0016745_3204_4973 546
72 3300046809 Ga0495600_0015290 Ga0495600_0015290_2346_4106 546
73 3300047317 Ga0495604_0008383 Ga0495604_0008383_5292_7061 546
74 3300049591 Ga0501075_0102777 Ga0501075_0102777_436_2106 546
75 iso_pu_bacteria 2891326441 2891331917 546
76 iso_pu_bacteria 2917736166 2917741855 546
77 iso_pu_bacteria 2997600082 2997605823 546
78 3300003203 JGI25406J46586_10000734 JGI25406J46586_100007344 547
79 3300005347 Ga0070668_100009490 Ga0070668_1000094903 547
80 3300005985 Ga0081539_10000242 Ga0081539_1000024211 547
81 3300009148 Ga0105243_10031856 Ga0105243_100318564 547
82 3300025972 Ga0207668_10042792 Ga0207668_100427922 547
83 3300028794 Ga0307515_10133551 Ga0307515_101335511 547
84 3300030521 Ga0307511_10000482 Ga0307511_1000048237 547
85 3300030522 Ga0307512_10006083 Ga0307512_1000608312 547
86 3300031456 Ga0307513_10033150 Ga0307513_100331503 547
87 3300031824 Ga0307413_10003546 Ga0307413_100035463 547
88 3300032005 Ga0307411_10080546 Ga0307411_100805462 547
89 3300033180 Ga0307510_10055517 Ga0307510_100555172 547
90 3300041451 Ga0451791_0041293 Ga0451791_0041293_4833_6539 547
91 3300042007 Ga0439449_0011598 Ga0439449_0011598_789_2468 547
92 3300044901 Ga0466960_0010132 Ga0466960_0010132_232_1920 547
93 3300046511 Ga0495608_0045795 Ga0495608_0045795_258_1934 547
94 3300048907 Ga0496104_0156337 Ga0496104_0156337_36_1775 547
95 3300048912 Ga0496109_0050045 Ga0496109_0050045_526_2202 547
96 3300048917 Ga0496114_0001113 Ga0496114_0001113_15962_17686 547
97 3300048917 Ga0496114_0073314 Ga0496114_0073314_935_2611 547
98 3300049823 Ga0501044_0137197 Ga0501044_0137197_338_2005 547
99 3300053136 Ga0500559_0001799 Ga0500559_0001799_1007_2680 547
100 iso_pu_bacteria 2558860280 2559430221 547
101 iso_pu_bacteria 2585427649 2586062761 547
102 iso_pu_bacteria 2751185734 2753070280 547
103 iso_pu_bacteria 2775506925 2776376162 547
104 iso_pu_bacteria 2795385470 2795784333 547
105 iso_pu_bacteria 2808606522 2809588056 547
106 iso_pu_bacteria 2863067949 2863071807 547
107 iso_pu_bacteria 2866552031 2866553690 547
108 iso_pu_bacteria 2870721527 2870729915 547
109 iso_pu_bacteria 2899359706 2899363935 547
110 iso_pu_bacteria 2915768154 2915773577 547
111 iso_pu_bacteria 8003314358 8003318030 547
112 iso_pu_bacteria 8047710418 8047711781 547
113 iso_pu_bacteria 8056207758 8056211186 547

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05960

DUF885

Bacterial protein of unknown function (DUF885)

43

576

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3iuk-assembly1.cif.gz_A crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.9059 3 544
3iuk-assembly1.cif.gz_A crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.8965 3 544
3iuk-assembly2.cif.gz_B crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.8964 3 544
3iuk-assembly2.cif.gz_B crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.8871 3 544
3o0y-assembly4.cif.gz_A the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.8613 3 546
ID Description Score Start End Superfamily
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.8396 31 542 1.10.1370.30
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.7878 31 542 1.10.1370.30
af_I1KKI1_103_208_1.20.58.120 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;BAG domain 0.6484 3 86 1.20.58.120
af_C0P467_144_249_1.20.58.120 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;BAG domain 0.6252 3 86 1.20.58.120
af_Q0DF00_148_253_1.20.58.120 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;BAG domain 0.622 3 86 1.20.58.120
ID Description Score Start End GO Terms
AF-A0A0F0HHM9-F1-model_v4 DUF885 domain-containing protein 0.991 1 547
AF-A0A0F0HHM9-F1-model_v4 DUF885 domain-containing protein 0.9892 1 547
AF-A0A368VSD3-F1-model_v4 Uncharacterized protein (DUF885 family) 0.9891 1 547
AF-A0A850D5D5-F1-model_v4 deleted 0.989 1 153
AF-A0A7J9VEB1-F1-model_v4 DUF885 family protein 0.9888 1 547

Feature Viewer

pLDDT pTM Quality
95.17 0.92 High
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Predicted Structure (AlphaFold2)

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