F080793

General Info

Members Datasets Scaffolds Average Seq Length
114 85 228 309

Family's Representative Sequence

Representative Sequence 3300049742|Ga0501080_0000058|Ga0501080_0000058_21166_22185
Length 339
Sequence VGSRGGRVLRPARTRRGIRPRRGEHRSSHHPGGRLNLVAIVGSTGTGKSQLSLDVAHELIGAGQAVEIVNADAMQLYRGMDIGTAKLTAAEREGVPHHLLDVLEPRDEASVARYQVEARTTIEQIWSRGALPILVGGSGLYVSSVVYDFRFPGTDAAIRERLEAELEQRGPGALHSRLRAVDRAAADAIGPANGRRLVRALEVIEITGTPFGAGLPSEASLWRPAVTIGLRSERPELVERLDRRVRAMWRAGLVDEVAGLLPDGFGVTASRAIGYAQAIAQLRGELDEQQAMEQTAALTRRYARRQVGWFGRYTGTHWIDAASADRVRRALDAVDTLNW

Samples

Sample ID Description Type Environment
1 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
2 3300003285 Grassland soil microbial communities from Hopland, California, USA - Sample H3_Rhizo_39 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
6 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
7 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
8 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
9 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
10 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
11 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
12 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
13 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
14 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
15 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
16 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
17 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
18 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
19 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
20 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
21 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
22 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
23 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
24 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
36 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
37 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
38 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
39 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
40 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
41 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
42 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
43 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
44 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
45 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
46 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
47 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
48 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
49 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
50 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
51 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
52 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
53 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
54 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
56 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
57 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
58 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
60 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
61 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
62 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
63 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
65 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
66 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
67 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
68 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
69 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
70 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
71 2643221553 Microbacterium sp. Root553 Isolate Unclassified
72 2643221630 Microbacterium sp. Root322 Isolate Unclassified
73 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
74 2773857759 Microbacterium sp. 1294 Isolate Unclassified
75 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
76 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
77 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
78 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
79 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
80 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
81 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
82 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
83 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
84 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
85 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 84.21
Metatranscriptomes 0.88
Isolates 14.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.53
Nodule 0
Rhizoplane 1.75
Rhizosphere 67.54
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501080_0000058 3300049742 Bacteria 72664
2 Ga0007423J48922_100833 3300003285 Bacteria 3820
3 Ga0055542_1008742 3300003762 Bacteria 1960
4 Ga0070658_10003361 3300005327 Bacteria 13191
5 Ga0070658_10122808 3300005327 Bacteria 2159
6 Ga0068855_100142462 3300005563 Bacteria 2731
7 Ga0068857_100017868 3300005577 Bacteria 6219
8 Ga0068856_100380641 3300005614 Bacteria 1430
9 Ga0068852_100023278 3300005616 Bacteria 4983
10 Ga0068851_10000124 3300005834 Bacteria 41585
11 Ga0075364_10056816 3300006051 Bacteria 2563
12 Ga0075364_10064103 3300006051 Bacteria 2412
13 Ga0075369_10031595 3300006186 Bacteria 2237
14 Ga0105240_10004036 3300009093 Bacteria 22588
15 Ga0105245_10012168 3300009098 Bacteria 7484
16 Ga0105241_10000211 3300009174 Bacteria 43844
17 Ga0105248_10161058 3300009177 Bacteria 2531
18 Ga0105237_10010051 3300009545 Bacteria 10092
19 Ga0105237_10591281 3300009545 Bacteria 1117
20 Ga0105238_10019767 3300009551 Bacteria 6857
21 Ga0105239_10185724 3300010375 Bacteria 2326
22 Ga0157369_10246318 3300013105 Bacteria 1866
23 Ga0171462_1001 3300013250 Bacteria 1135406
24 Ga0157372_10404060 3300013307 Bacteria 1591
25 Ga0163163_10529360 3300014325 Bacteria 1241
26 Ga0209148_1001750 3300025254 Bacteria 9391
27 Ga0207656_10000001 3300025321 Bacteria 1323684
28 Ga0207656_10000003 3300025321 Bacteria 771644
29 Ga0207656_10000004 3300025321 Bacteria 632320
30 Ga0207654_10000003 3300025911 Bacteria 1030378
31 Ga0207695_10006949 3300025913 Bacteria 14535
32 Ga0207671_10000001 3300025914 Bacteria 1318881
33 Ga0207694_10000039 3300025924 Bacteria 186164
34 Ga0207687_10014519 3300025927 Bacteria 5156
35 Ga0207711_10094718 3300025941 Bacteria 2632
36 Ga0207667_10120531 3300025949 Bacteria 2703
37 Ga0207702_10165808 3300026078 Bacteria 2021
38 Ga0207674_10015764 3300026116 Bacteria 8290
39 Ga0207698_10008752 3300026142 Bacteria 6419
40 Ga0307515_10053516 3300028794 Bacteria 5953
41 Ga0265327_10060833 3300031251 Bacteria 1929
42 Ga0307406_10000358 3300031901 Bacteria 26702
43 Ga0307406_10166093 3300031901 Bacteria 1592
44 Ga0451841_0829356 3300041498 Bacteria 3253
45 Ga0466965_0000002 3300044683 Bacteria 297957
46 Ga0466970_0000146 3300044765 Bacteria 32667
47 Ga0496105_0108583 3300048908 Bacteria 2291
48 Ga0496114_0048325 3300048917 Bacteria 3539
49 Ga0496117_0002747 3300048920 Bacteria 21574
50 Ga0496118_0034725 3300048921 Bacteria 4108
51 Ga0496119_0006449 3300048922 Bacteria 10861
52 Ga0496120_0022845 3300048923 Bacteria 3929
53 Ga0496121_0159876 3300048924 Bacteria 1649
54 Ga0496122_0019809 3300048925 Bacteria 6125
55 Ga0496125_0007530 3300048928 Bacteria 11569
56 Ga0496125_0060976 3300048928 Bacteria 3028
57 Ga0496126_0002565 3300048929 Bacteria 24296
58 Ga0496126_0232801 3300048929 Bacteria 1543
59 Ga0501032_0012635 3300049569 Bacteria 6025
60 Ga0501032_0048870 3300049569 Bacteria 2856
61 Ga0501032_0083718 3300049569 Bacteria 2121
62 Ga0501033_0024662 3300049570 Bacteria 4535
63 Ga0501034_0001205 3300049571 Bacteria 35504
64 Ga0501034_0037771 3300049571 Bacteria 4891
65 Ga0501034_0044648 3300049571 Bacteria 4480
66 Ga0501034_0060682 3300049571 Bacteria 3798
67 Ga0501034_0069320 3300049571 Bacteria 3537
68 Ga0501034_0102132 3300049571 Bacteria 2860
69 Ga0501034_0157335 3300049571 Bacteria 2245
70 Ga0501034_0212786 3300049571 Bacteria 1888
71 Ga0501034_0251475 3300049571 Bacteria 1712
72 Ga0501037_0012873 3300049573 Bacteria 6165
73 Ga0501038_0013884 3300049574 Bacteria 7340
74 Ga0501038_0028661 3300049574 Bacteria 4945
75 Ga0501038_0138268 3300049574 Bacteria 1995
76 Ga0501039_0052515 3300049575 Bacteria 3154
77 Ga0501043_0015381 3300049579 Bacteria 5993
78 Ga0501043_0119160 3300049579 Bacteria 2070
79 Ga0501043_0168761 3300049579 Bacteria 1708
80 Ga0501047_0004348 3300049581 Bacteria 13330
81 Ga0501047_0124970 3300049581 Bacteria 2453
82 Ga0501067_0044498 3300049583 Bacteria 2466
83 Ga0501070_0000484 3300049586 Bacteria 36176
84 Ga0501070_0201497 3300049586 Bacteria 1634
85 Ga0501074_0251083 3300049590 Bacteria 1258
86 Ga0501083_0000056 3300049744 Bacteria 82115
87 Ga0501035_0000926 3300049822 Bacteria 31067
88 Ga0501044_0058092 3300049823 Bacteria 3968
89 Ga0501044_0114926 3300049823 Bacteria 2697
90 Ga0501044_0399260 3300049823 Bacteria 1288
91 Ga0500650_0011880 3300053098 Bacteria 3605
92 Ga0500568_0000075 3300053139 Bacteria 94413
93 Ga0500568_0000151 3300053139 Bacteria 60575
94 Ga0500568_0007837 3300053139 Bacteria 5203
95 Ga0500573_0000007 3300053140 Bacteria 272970
96 Ga0500573_0087729 3300053140 Bacteria 1761
97 Ga0500577_0016610 3300053142 Bacteria 2324
98 2588106570 2585428157 Bacteria 3018951
99 2643733979 2643221542 Bacteria 3563959
100 2643785454 2643221553 Bacteria 3544260
101 2644170557 2643221630 Bacteria 3601215
102 2644183887 2643221632 Bacteria 3406696
103 2774383388 2773857759 Bacteria 2963774
104 2808885244 2808606368 Bacteria 3174172
105 2816428103 2816332119 Bacteria 8120218
106 2852664913 2852663356 Bacteria 4090475
107 2857723499 2857723135 Bacteria 4217853
108 2857738607 2857737099 Bacteria 3104305
109 2870623187 2870622029 Bacteria 3643329
110 2939657595 2939657138 Bacteria 3740283
111 2946034099 2946033335 Bacteria 3835514
112 2946043854 2946041624 Bacteria 4191385
113 2977253575 2977251589 Bacteria 2952848
114 8004185447 8004182704 Bacteria 3391155
115 Ga0501080_0000058
116 Ga0007423J48922_100833
117 Ga0055542_1008742
118 Ga0070658_10003361
119 Ga0070658_10122808
120 Ga0068855_100142462
121 Ga0068857_100017868
122 Ga0068856_100380641
123 Ga0068852_100023278
124 Ga0068851_10000124
125 Ga0075364_10056816
126 Ga0075364_10064103
127 Ga0075369_10031595
128 Ga0105240_10004036
129 Ga0105245_10012168
130 Ga0105241_10000211
131 Ga0105248_10161058
132 Ga0105237_10010051
133 Ga0105237_10591281
134 Ga0105238_10019767
135 Ga0105239_10185724
136 Ga0157369_10246318
137 Ga0171462_1001
138 Ga0157372_10404060
139 Ga0163163_10529360
140 Ga0209148_1001750
141 Ga0207656_10000001
142 Ga0207656_10000003
143 Ga0207656_10000004
144 Ga0207654_10000003
145 Ga0207695_10006949
146 Ga0207671_10000001
147 Ga0207694_10000039
148 Ga0207687_10014519
149 Ga0207711_10094718
150 Ga0207667_10120531
151 Ga0207702_10165808
152 Ga0207674_10015764
153 Ga0207698_10008752
154 Ga0307515_10053516
155 Ga0265327_10060833
156 Ga0307406_10000358
157 Ga0307406_10166093
158 Ga0451841_0829356
159 Ga0466965_0000002
160 Ga0466970_0000146
161 Ga0496105_0108583
162 Ga0496114_0048325
163 Ga0496117_0002747
164 Ga0496118_0034725
165 Ga0496119_0006449
166 Ga0496120_0022845
167 Ga0496121_0159876
168 Ga0496122_0019809
169 Ga0496125_0007530
170 Ga0496125_0060976
171 Ga0496126_0002565
172 Ga0496126_0232801
173 Ga0501032_0012635
174 Ga0501032_0048870
175 Ga0501032_0083718
176 Ga0501033_0024662
177 Ga0501034_0001205
178 Ga0501034_0037771
179 Ga0501034_0044648
180 Ga0501034_0060682
181 Ga0501034_0069320
182 Ga0501034_0102132
183 Ga0501034_0157335
184 Ga0501034_0212786
185 Ga0501034_0251475
186 Ga0501037_0012873
187 Ga0501038_0013884
188 Ga0501038_0028661
189 Ga0501038_0138268
190 Ga0501039_0052515
191 Ga0501043_0015381
192 Ga0501043_0119160
193 Ga0501043_0168761
194 Ga0501047_0004348
195 Ga0501047_0124970
196 Ga0501067_0044498
197 Ga0501070_0000484
198 Ga0501070_0201497
199 Ga0501074_0251083
200 Ga0501083_0000056
201 Ga0501035_0000926
202 Ga0501044_0058092
203 Ga0501044_0114926
204 Ga0501044_0399260
205 Ga0500650_0011880
206 Ga0500568_0000075
207 Ga0500568_0000151
208 Ga0500568_0007837
209 Ga0500573_0000007
210 Ga0500573_0087729
211 Ga0500577_0016610
212 2588106570
213 2643733979
214 2643785454
215 2644170557
216 2644183887
217 2774383388
218 2808885244
219 2816428103
220 2852664913
221 2857723499
222 2857738607
223 2870623187
224 2939657595
225 2946034099
226 2946043854
227 2977253575
228 8004185447

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01715

IPPT

IPP transferase

75

313

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qgn-assembly1.cif.gz_A crystal structure of trna isopentenylpyrophosphate transferase (bh2366) from bacillus halodurans, northeast structural genomics consortium target bhr41. 0.9227 4 305
3crr-assembly1.cif.gz_A structure of trna dimethylallyltransferase: rna modification through a channel 0.9079 1 300
2zm5-assembly1.cif.gz_A crystal structure of trna modification enzyme miaa in the complex with trna(phe) 0.9032 5 300
2qgn-assembly1.cif.gz_A crystal structure of trna isopentenylpyrophosphate transferase (bh2366) from bacillus halodurans, northeast structural genomics consortium target bhr41. 0.8937 4 305
3crr-assembly1.cif.gz_A structure of trna dimethylallyltransferase: rna modification through a channel 0.8892 1 300
ID Description Score Start End Superfamily
af_P9WJW1_115_180_1.10.20.140 Mainly Alpha;Orthogonal Bundle;Histone, subunit A; 0.9648 113 174 1.10.20.140
af_A0A0P0X3E8_17_159_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9602 3 114 3.40.50.300
3exaA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9594 4 108 3.40.50.300
3crrA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.943 1 108 3.40.50.300
3d3qB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9317 4 114 3.40.50.300
ID Description Score Start End GO Terms
AF-T1LJL2-F1-model_v4 deleted 0.977 5 101
AF-A0A1X0QW13-F1-model_v4 IPPT-domain-containing protein 0.9749 5 108 GO:0005524
GO:0005739
GO:0006400
GO:0052381
AF-A0A7H8IKT2-F1-model_v4 tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase) 0.9696 1 302 GO:0005524
GO:0006400
GO:0052381
AF-A0A1H9J1T6-F1-model_v4 tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase) 0.9657 2 302 GO:0005524
GO:0006400
GO:0052381
AF-A0A7W1F6L5-F1-model_v4 AAA family ATPase 0.9641 1 104 GO:0005524
GO:0006400
GO:0052381

Map