F084952

General Info

Members Datasets Scaffolds Average Seq Length
115 77 230 457

Family's Representative Sequence

Representative Sequence 3300045836|Ga0466958_0031379|Ga0466958_0031379_1451_2908
Length 485
Sequence MCCNANGAAAPPERAIAHRAVRTLVRVALQLYDTATRSLRAFEPVRPGKASIYLCGLTVQGPPHLGHVRNWITFDILRRWLTHQGYEVTLVRNVTDIDDKILHKSATSGQPWWALAFRNERELIAAEQALGCLPPSYEPRATGHVPEMIELMQRLIDGGHAYPAGGDVYFDVQSFPAYGALSGQRLDDMQPAGDSVGDDRKHDPRDFALWKAAKEGEPAWATPWGPGRPGWHLECSAMATKYLGATFDIHGGGLDLVFPHHENELAQSVAAGDGFARYWMHNGLLTLSGEKMSKSLGNTLQVREVTTRWRPVEVRYYLGAAHYRSTMEFSEVALDEAAAAYRRIENFLERAAEVVGAVEPGPLCAEFADALDDDLGTPQAFAAVHQVVREGNTALANADKAAARGALASVLAMTRLLGIAPDQWESARSADLTGAVDVLVRVALEQRAAARARKDYATADAIRDQLTAAGIVVEDTPDGPRWTVE

Samples

Sample ID Description Type Environment
1 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
5 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
31 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
32 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
33 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
34 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
35 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
36 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
37 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
38 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
39 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
40 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
41 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
42 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
43 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
44 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
45 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
46 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
47 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
48 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
49 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
50 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
51 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
52 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
53 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
54 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
55 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
56 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
57 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
58 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
59 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
60 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
61 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
62 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
63 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
64 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
65 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
66 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
67 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
68 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
69 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
70 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
71 2808606372 Agromyces sp. 23-23 Isolate Unclassified
72 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
73 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
74 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
75 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
76 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
77 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.17
Metatranscriptomes 0
Isolates 7.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.96
Rhizosphere 84.35
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466958_0031379 3300045836 Bacteria 3158
2 Ga0070683_100004494 3300005329 Bacteria 11507
3 Ga0070670_100246140 3300005331 Bacteria 1557
4 Ga0070700_100163761 3300005441 Bacteria 1533
5 Ga0070662_100023757 3300005457 Bacteria 4215
6 Ga0070706_100005997 3300005467 Bacteria 11485
7 Ga0070698_100000546 3300005471 Bacteria 40175
8 Ga0070684_100104068 3300005535 Bacteria 2539
9 Ga0070672_100065030 3300005543 Bacteria 2884
10 Ga0068855_100038215 3300005563 Bacteria 5704
11 Ga0068855_100372475 3300005563 Bacteria 1569
12 Ga0070664_100000534 3300005564 Bacteria 29002
13 Ga0068856_100079130 3300005614 Bacteria 3260
14 Ga0068859_100005795 3300005617 Bacteria 12549
15 Ga0068858_100119407 3300005842 Bacteria 2465
16 Ga0068860_100091818 3300005843 Bacteria 2893
17 Ga0068862_100017329 3300005844 Bacteria 5997
18 Ga0081455_10022175 3300005937 Bacteria 5942
19 Ga0081540_1071402 3300005983 Bacteria 1604
20 Ga0075431_100020789 3300006847 Bacteria 6708
21 Ga0097620_100005795 3300006931 Bacteria 12549
22 Ga0105245_10003530 3300009098 Bacteria 13983
23 Ga0105245_10144443 3300009098 Bacteria 2244
24 Ga0105247_10008443 3300009101 Bacteria 6275
25 Ga0105239_10184743 3300010375 Bacteria 2333
26 Ga0207710_10004334 3300025900 Bacteria 6208
27 Ga0207647_10068920 3300025904 Bacteria 2139
28 Ga0207695_10082695 3300025913 Bacteria 3245
29 Ga0207706_10025580 3300025933 Bacteria 5287
30 Ga0207679_10014433 3300025945 Bacteria 5196
31 Ga0207667_10015114 3300025949 Bacteria 8777
32 Ga0207667_10036963 3300025949 Bacteria 5226
33 Ga0307513_10000002 3300031456 Bacteria 842612
34 Ga0307513_10013558 3300031456 Bacteria 9997
35 Ga0307413_10030266 3300031824 Bacteria 3040
36 Ga0307518_10000548 3300031838 Bacteria 28610
37 Ga0307410_10073476 3300031852 Bacteria 2378
38 Ga0307406_10054986 3300031901 Bacteria 2543
39 Ga0307409_100020841 3300031995 Bacteria 4479
40 Ga0307409_100048604 3300031995 Bacteria 3230
41 Ga0307416_100060818 3300032002 Bacteria 3078
42 Ga0307416_100163364 3300032002 Bacteria 2062
43 Ga0307416_100170647 3300032002 Bacteria 2024
44 Ga0307414_10188171 3300032004 Bacteria 1668
45 Ga0307411_10036474 3300032005 Bacteria 3081
46 Ga0307411_10064855 3300032005 Bacteria 2447
47 Ga0307415_100024600 3300032126 Bacteria 3763
48 Ga0395901_0177468 3300038443 Bacteria 2234
49 Ga0439436_0002687 3300041404 Bacteria 5365
50 Ga0439439_0002082 3300041406 Bacteria 4170
51 Ga0439449_0001903 3300042007 Bacteria 8207
52 Ga0439449_0005821 3300042007 Bacteria 4714
53 Ga0439457_003612 3300042014 Bacteria 4190
54 Ga0466969_0041849 3300044656 Bacteria 2290
55 Ga0466972_0003837 3300044658 Bacteria 7479
56 Ga0466972_0010611 3300044658 Bacteria 4620
57 Ga0466966_0000724 3300044684 Bacteria 20967
58 Ga0466966_0113443 3300044684 Bacteria 1669
59 Ga0466966_0124604 3300044684 Bacteria 1581
60 Ga0466961_0001505 3300044693 Bacteria 14462
61 Ga0466961_0006218 3300044693 Bacteria 7584
62 Ga0466961_0045941 3300044693 Bacteria 2794
63 Ga0466963_0006438 3300044694 Bacteria 6945
64 Ga0466963_0009023 3300044694 Bacteria 5989
65 Ga0466963_0011022 3300044694 Bacteria 5496
66 Ga0466963_0017332 3300044694 Bacteria 4489
67 Ga0466963_0033871 3300044694 Bacteria 3320
68 Ga0466963_0042768 3300044694 Bacteria 2976
69 Ga0466963_0095276 3300044694 Bacteria 2031
70 Ga0466963_0145323 3300044694 Bacteria 1645
71 Ga0466964_0004258 3300044706 Bacteria 5271
72 Ga0466964_0023262 3300044706 Bacteria 2409
73 Ga0466964_0046910 3300044706 Bacteria 1762
74 Ga0466971_0022499 3300044719 Bacteria 2809
75 Ga0466970_0011801 3300044765 Bacteria 4456
76 Ga0466957_0002910 3300044842 Bacteria 9280
77 Ga0466957_0010001 3300044842 Bacteria 5428
78 Ga0466957_0027202 3300044842 Bacteria 3397
79 Ga0466960_0013491 3300044901 Bacteria 3473
80 Ga0466960_0075105 3300044901 Bacteria 1690
81 Ga0466959_0005679 3300045049 Bacteria 8583
82 Ga0466958_0013180 3300045836 Bacteria 4702
83 Ga0466958_0044402 3300045836 Bacteria 2678
84 Ga0466967_0000366 3300045976 Bacteria 20999
85 Ga0466967_0002132 3300045976 Bacteria 12130
86 Ga0466967_0045896 3300045976 Bacteria 3800
87 Ga0466967_0060542 3300045976 Bacteria 3355
88 Ga0466967_0093152 3300045976 Bacteria 2741
89 Ga0466967_0103348 3300045976 Bacteria 2607
90 Ga0466967_0142660 3300045976 Bacteria 2232
91 Ga0495581_0032249 3300047315 Bacteria 3034
92 Ga0495676_0136133 3300047321 Bacteria 1766
93 Ga0496102_0000029 3300048905 Bacteria 222195
94 Ga0496102_0001044 3300048905 Bacteria 25698
95 Ga0496103_0000143 3300048906 Bacteria 74753
96 Ga0496103_0031161 3300048906 Bacteria 3248
97 Ga0496109_0004007 3300048912 Bacteria 12301
98 Ga0496109_0057134 3300048912 Bacteria 3561
99 Ga0496111_0057249 3300048914 Bacteria 2822
100 Ga0496112_0235357 3300048915 Bacteria 1785
101 Ga0496118_0012604 3300048921 Bacteria 8092
102 Ga0496121_0066747 3300048924 Bacteria 2919
103 Ga0501081_0070928 3300049743 Bacteria 2428
104 nmdc:mga06r32_39405_c1 3300050510 Bacteria 4482
105 Ga0466962_0006056 3300061719 Bacteria 5815
106 Ga0466962_0029982 3300061719 Bacteria 2604
107 2586065053 2585427649 Bacteria 9053857
108 2731905886 2731639228 Bacteria 4187555
109 2808901210 2808606372 Bacteria 4649509
110 2809593461 2808606522 Bacteria 9488490
111 2862993478 2862993130 Bacteria 3860849
112 2866612558 2866612099 Bacteria 7543886
113 2915769391 2915768154 Bacteria 8424322
114 2966922074 2966921586 Bacteria 3092803
115 8056060032 8056054917 Bacteria 5736694
116 Ga0466958_0031379
117 Ga0070683_100004494
118 Ga0070670_100246140
119 Ga0070700_100163761
120 Ga0070662_100023757
121 Ga0070706_100005997
122 Ga0070698_100000546
123 Ga0070684_100104068
124 Ga0070672_100065030
125 Ga0068855_100038215
126 Ga0068855_100372475
127 Ga0070664_100000534
128 Ga0068856_100079130
129 Ga0068859_100005795
130 Ga0068858_100119407
131 Ga0068860_100091818
132 Ga0068862_100017329
133 Ga0081455_10022175
134 Ga0081540_1071402
135 Ga0075431_100020789
136 Ga0097620_100005795
137 Ga0105245_10003530
138 Ga0105245_10144443
139 Ga0105247_10008443
140 Ga0105239_10184743
141 Ga0207710_10004334
142 Ga0207647_10068920
143 Ga0207695_10082695
144 Ga0207706_10025580
145 Ga0207679_10014433
146 Ga0207667_10015114
147 Ga0207667_10036963
148 Ga0307513_10000002
149 Ga0307513_10013558
150 Ga0307413_10030266
151 Ga0307518_10000548
152 Ga0307410_10073476
153 Ga0307406_10054986
154 Ga0307409_100020841
155 Ga0307409_100048604
156 Ga0307416_100060818
157 Ga0307416_100163364
158 Ga0307416_100170647
159 Ga0307414_10188171
160 Ga0307411_10036474
161 Ga0307411_10064855
162 Ga0307415_100024600
163 Ga0395901_0177468
164 Ga0439436_0002687
165 Ga0439439_0002082
166 Ga0439449_0001903
167 Ga0439449_0005821
168 Ga0439457_003612
169 Ga0466969_0041849
170 Ga0466972_0003837
171 Ga0466972_0010611
172 Ga0466966_0000724
173 Ga0466966_0113443
174 Ga0466966_0124604
175 Ga0466961_0001505
176 Ga0466961_0006218
177 Ga0466961_0045941
178 Ga0466963_0006438
179 Ga0466963_0009023
180 Ga0466963_0011022
181 Ga0466963_0017332
182 Ga0466963_0033871
183 Ga0466963_0042768
184 Ga0466963_0095276
185 Ga0466963_0145323
186 Ga0466964_0004258
187 Ga0466964_0023262
188 Ga0466964_0046910
189 Ga0466971_0022499
190 Ga0466970_0011801
191 Ga0466957_0002910
192 Ga0466957_0010001
193 Ga0466957_0027202
194 Ga0466960_0013491
195 Ga0466960_0075105
196 Ga0466959_0005679
197 Ga0466958_0013180
198 Ga0466958_0044402
199 Ga0466967_0000366
200 Ga0466967_0002132
201 Ga0466967_0045896
202 Ga0466967_0060542
203 Ga0466967_0093152
204 Ga0466967_0103348
205 Ga0466967_0142660
206 Ga0495581_0032249
207 Ga0495676_0136133
208 Ga0496102_0000029
209 Ga0496102_0001044
210 Ga0496103_0000143
211 Ga0496103_0031161
212 Ga0496109_0004007
213 Ga0496109_0057134
214 Ga0496111_0057249
215 Ga0496112_0235357
216 Ga0496118_0012604
217 Ga0496121_0066747
218 Ga0501081_0070928
219 nmdc:mga06r32_39405_c1
220 Ga0466962_0006056
221 Ga0466962_0029982
222 2586065053
223 2731905886
224 2808901210
225 2809593461
226 2862993478
227 2866612558
228 2915769391
229 2966922074
230 8056060032

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01406

tRNA-synt_1e

tRNA synthetases class I (C) catalytic domain

41

339

0.99

PF09190

DALR_2

DALR domain

366

420

0.95

PF23493

429

482

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1li7-assembly2.cif.gz_B crystal structure of cysteinyl-trna synthetase with cysteine substrate bound 0.9345 3 402
3tqo-assembly1.cif.gz_A structure of the cysteinyl-trna synthetase (cyss) from coxiella burnetii. 0.9315 1 402
1li7-assembly1.cif.gz_A crystal structure of cysteinyl-trna synthetase with cysteine substrate bound 0.9283 3 402
1li5-assembly2.cif.gz_B crystal structure of cysteinyl-trna synthetase 0.9281 3 402
1li7-assembly2.cif.gz_B crystal structure of cysteinyl-trna synthetase with cysteine substrate bound 0.92 3 402
ID Description Score Start End Superfamily
af_C0PHQ1_472_552_1.10.287.10 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;S15/NS1, RNA-binding 0.9894 424 466 1.10.287.10
af_P9WFW1_1_304_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9696 1 307 3.40.50.620
1li7A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9546 18 310 3.40.50.620
af_C0PHQ1_15_336_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9533 2 310 3.40.50.620
1li7A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9512 18 310 3.40.50.620
ID Description Score Start End GO Terms
AF-J1F6D8-F1-model_v4 Cysteinyl-tRNA synthetase 0.9932 3 132 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-A0A382S5V6-F1-model_v4 tRNA synthetases class I catalytic domain-containing protein 0.9922 3 114 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-A0A0T5Z8J2-F1-model_v4 tRNA synthetases class I (C) catalytic domain-containing protein 0.9903 3 109 GO:0004817
GO:0005524
GO:0005829
GO:0006423
AF-W4TKC3-F1-model_v4 deleted 0.9902 1 223
AF-A0A7X7A0U5-F1-model_v4 Class I tRNA ligase family protein 0.9887 3 139 GO:0004817
GO:0005524
GO:0005829
GO:0006423

Map