F086022

General Info

Members Datasets Scaffolds Average Seq Length
115 95 230 801

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3006425503|3006425666
Length 969
Sequence RSDSGFSENLRRFRPTLPGYPGAMGLQEGDRAGRAGRTDRTTRPRVLRFEDLTSSDVPVVGGKNASLGEMTANLTARGVRVPIGFATTAAAYEEFLGTGGLRDAVRERIDALHAGAPLAETGREIRELILATALPQGLAEEVTAAYRQLAARLGRTDPDVAVRSSATAEDLPEASFAGQQETFLGITGEERLLDACRRCYASLFTDRAINYREEHGFDHLRVALSVGVQEMVRSDLAGAGVMFTLDTDSGFPRVVLVNAAYGLGESVVSGRVDPDEYLVFKPLLGRAGCRPVISRTAGGKQSKIVYADGGGGPGGDPTEEVATSAAERSSCVLTEDEILTLAEWAVAVEEHYGCPMDLEWAKDGRTGELSVVQARPETVQARKSKEAATLRSYRLTGEGRPLVTGLAVGDAVATGRVCRLRSARDIAAFEDGSVLVTGATDPDWEPIMKRAAAIVTDRGGRTSHAAIVSRELGLPAVVGTGGATAGLHDGQEVTVSCAEGEEGRVYAGAVDYEEREIALDRIERTRTRVMLNLANPSAAFRWWRLPADGVGLARMEFVVNNHIKIHPLALIHPEALADAPEHREARERIEELTRGYPDKTRYFVDRLAYGIARIAAAWWPKPVIVRMSDFKTNEYAKLIGGGPFEPGEENPMLGWRGASRYDSDGYREGFALECRAVRRVREEMGLTNTVVMIPFCRTLDEADRVLATLAEHGLARGSGGRNGGDGRGGPRAGGERGDGSRGGLEVYVMAEIPSNIVLAEEFADRFDGFSVGSNDLTQLTLGIDRDSELLAQEFDERDPSVTRSIEHLIEVAHRKGRKAGLCGQRPSDDPDFARFLVAAGIDSISVTPDSFLAVKEHVARAEREDRGTAAGRREGDRAERRPGARGATEDGDRVAGGRGAGRPGGRGGGRRGHRAEPREAGSRRTGTGTGTGTGDRQAGTGEGRTGTGEGRTGTGEGRTGSGEGRAEAA

Samples

Sample ID Description Type Environment
1 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
10 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
11 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
12 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
13 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
14 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
15 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
16 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
17 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
18 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
19 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
20 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
21 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
22 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
23 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
24 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
25 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
26 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
27 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
28 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
29 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
30 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
31 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
32 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
33 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
34 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
35 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
36 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
37 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
38 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
39 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
40 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
41 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
42 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
43 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
44 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
45 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
46 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
47 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
48 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
49 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
50 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
51 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
52 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
53 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
54 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
55 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
56 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
57 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
58 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
59 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
60 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
61 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
62 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
63 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
71 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
72 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
73 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
74 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
75 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
76 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
77 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
79 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
80 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
81 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
82 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
83 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
84 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
85 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
86 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
87 2600255067 Paraburkholderia kururiensis thiooxydans NBRC 107107 Isolate Unclassified
88 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
89 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
90 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
91 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
92 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
93 2920879853 Kocuria salina CV6 Isolate Unclassified
94 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
95 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 89.57
Metatranscriptomes 0
Isolates 10.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.91
Nodule 2.61
Rhizoplane 0
Rhizosphere 70.43
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000046 3300002704 Bacteria 80685
2 JGI25152J39213_1000601 3300002773 Bacteria 19377
3 JGI25153J46596_10000791 3300003215 Bacteria 19377
4 rootL2_10239520 3300003322 Bacteria 6452
5 rootH1_10054801 3300003323 Bacteria 20891
6 Ga0055524_1000163 3300003775 Bacteria 76321
7 Ga0070679_100022802 3300005530 Bacteria 6123
8 Ga0070665_100017807 3300005548 Bacteria 7132
9 Ga0075363_100018126 3300006048 Bacteria 3502
10 Ga0075364_10002725 3300006051 Bacteria 9931
11 Ga0075370_10009060 3300006353 Bacteria 5147
12 Ga0157370_10008696 3300013104 Bacteria 10925
13 Ga0157378_10094181 3300013297 Bacteria 2727
14 Ga0213876_10006082 3300021384 Bacteria 6596
15 Ga0213875_10000140 3300021388 Bacteria 78573
16 Ga0207425_1001710 3300025245 Bacteria 8707
17 Ga0209129_1000251 3300025258 Bacteria 56210
18 Ga0209565_1000010 3300025263 Bacteria 687724
19 Ga0209673_1002163 3300025273 Bacteria 14534
20 Ga0209025_1000830 3300025294 Bacteria 49143
21 Ga0209758_1000460 3300025297 Bacteria 67486
22 Ga0209050_1010291 3300025298 Bacteria 4629
23 Ga0209256_1000012 3300025299 Bacteria 790371
24 Ga0265337_1000119 3300028556 Bacteria 40482
25 Ga0265337_1000170 3300028556 Bacteria 34006
26 Ga0265337_1000323 3300028556 Bacteria 25587
27 Ga0265319_1000703 3300028563 Bacteria 21858
28 Ga0265334_10001992 3300028573 Bacteria 9708
29 Ga0265318_10003504 3300028577 Bacteria 7864
30 Ga0265336_10000537 3300028666 Bacteria 21711
31 Ga0265336_10000652 3300028666 Bacteria 18911
32 Ga0265338_10000482 3300028800 Bacteria 71209
33 Ga0265338_10000925 3300028800 Bacteria 49504
34 Ga0265338_10001653 3300028800 Bacteria 35528
35 Ga0265338_10011429 3300028800 Bacteria 10253
36 Ga0265338_10032260 3300028800 Bacteria 5114
37 Ga0265324_10000345 3300029957 Bacteria 33698
38 Ga0265324_10005177 3300029957 Bacteria 5691
39 Ga0265339_10003026 3300031249 Bacteria 11853
40 Ga0265339_10020542 3300031249 Bacteria 3856
41 Ga0265331_10007904 3300031250 Bacteria 6095
42 Ga0265316_10001231 3300031344 Bacteria 27541
43 Ga0265313_10000365 3300031595 Bacteria 49111
44 Ga0265313_10018434 3300031595 Bacteria 3918
45 Ga0316575_10008193 3300031665 Bacteria 3801
46 Ga0265314_10035678 3300031711 Bacteria 3623
47 Ga0265314_10042835 3300031711 Bacteria 3225
48 Ga0265342_10009039 3300031712 Bacteria 7071
49 Ga0316576_10022040 3300031727 Bacteria 4417
50 Ga0316576_10030232 3300031727 Bacteria 3834
51 Ga0307415_100020251 3300032126 Bacteria 4058
52 Ga0316580_10003263 3300032139 Bacteria 4584
53 Ga0316580_10003492 3300032139 Bacteria 4472
54 Ga0316574_0024243 3300035398 Bacteria 3629
55 Ga0373937_0043088 3300036401 Bacteria 4119
56 Ga0316584_0006744 3300036712 Bacteria 7788
57 Ga0316584_0031175 3300036712 Bacteria 3942
58 Ga0436364_0059440 3300037853 Bacteria 78275
59 Ga0436365_0680264 3300039437 Bacteria 9276
60 Ga0466966_0010560 3300044684 Bacteria 6138
61 Ga0466963_0035701 3300044694 Bacteria 3240
62 Ga0466971_0002653 3300044719 Bacteria 7553
63 Ga0466957_0013921 3300044842 Bacteria 4676
64 Ga0466959_0000616 3300045049 Bacteria 20739
65 Ga0466959_0006447 3300045049 Bacteria 8125
66 Ga0466958_0000718 3300045836 Bacteria 14480
67 Ga0466967_0049531 3300045976 Bacteria 3674
68 Ga0495592_0021823 3300046454 Bacteria 4871
69 Ga0495580_0000723 3300046472 Bacteria 28258
70 Ga0495608_0020038 3300046511 Bacteria 4598
71 Ga0495618_0001023 3300046514 Eukaryota 19182
72 Ga0495628_0000481 3300046516 Eukaryota 36497
73 Ga0495599_0043010 3300046678 Bacteria 2835
74 Ga0495674_0000811 3300047319 Eukaryota 29747
75 Ga0495684_0005020 3300047471 Bacteria 10324
76 Ga0495602_0021635 3300048088 Bacteria 6323
77 Ga0495682_0015626 3300049460 Bacteria 2876
78 Ga0501031_0000659 3300049568 Bacteria 20479
79 Ga0501031_0023550 3300049568 Bacteria 4014
80 Ga0501034_0008054 3300049571 Bacteria 11185
81 Ga0501034_0009198 3300049571 Bacteria 10365
82 Ga0501034_0017643 3300049571 Bacteria 7318
83 Ga0501036_0003958 3300049572 Bacteria 11906
84 Ga0501037_0000789 3300049573 Bacteria 23842
85 Ga0501039_0013017 3300049575 Bacteria 6359
86 Ga0501041_0005414 3300049577 Bacteria 7476
87 Ga0501043_0006703 3300049579 Bacteria 9198
88 Ga0501075_0023098 3300049591 Bacteria 4551
89 Ga0501223_000017 3300049663 Bacteria 68157
90 Ga0501223_000035 3300049663 Bacteria 48008
91 Ga0501224_000029 3300049664 Bacteria 48059
92 Ga0501225_0000004 3300049705 Bacteria 140738
93 Ga0501225_0000026 3300049705 Bacteria 48959
94 Ga0501234_001269 3300049707 Bacteria 3963
95 Ga0501081_0015319 3300049743 Bacteria 5058
96 Ga0501083_0001309 3300049744 Bacteria 16857
97 Ga0501044_0025887 3300049823 Bacteria 6218
98 Ga0501226_000052 3300049853 Bacteria 44514
99 nmdc:mga00v17_1130_c1 3300050491 Bacteria 14009
100 nmdc:mga07m45_6987_c1 3300050496 Bacteria 5742
101 Ga0590071_002213 3300059421 Bacteria 4943
102 Ga0466962_0010345 3300061719 Bacteria 4482
103 Ga0530510_0000305 3300061734 Bacteria 31282
104 3006425666 3006425503 Bacteria 6491253
105 2513712647 2513237103 Bacteria 7647401
106 2515644957 2515154114 Bacteria 7848616
107 2600812746 2600255067 Bacteria 6795583
108 2657685044 2657244999 Bacteria 5946535
109 2804754879 2802429268 Bacteria 6094027
110 2891401005 2891395885 Bacteria 9251614
111 2891560026 2891554331 Bacteria 8812224
112 2919140082 2919138771 Bacteria 5281312
113 2920883160 2920879853 Bacteria 4216831
114 3005451929 3005445848 Bacteria 6906074
115 8018128547 8018127388 Bacteria 7351159
116 JGI25155J39150_1000046
117 JGI25152J39213_1000601
118 JGI25153J46596_10000791
119 rootL2_10239520
120 rootH1_10054801
121 Ga0055524_1000163
122 Ga0070679_100022802
123 Ga0070665_100017807
124 Ga0075363_100018126
125 Ga0075364_10002725
126 Ga0075370_10009060
127 Ga0157370_10008696
128 Ga0157378_10094181
129 Ga0213876_10006082
130 Ga0213875_10000140
131 Ga0207425_1001710
132 Ga0209129_1000251
133 Ga0209565_1000010
134 Ga0209673_1002163
135 Ga0209025_1000830
136 Ga0209758_1000460
137 Ga0209050_1010291
138 Ga0209256_1000012
139 Ga0265337_1000119
140 Ga0265337_1000170
141 Ga0265337_1000323
142 Ga0265319_1000703
143 Ga0265334_10001992
144 Ga0265318_10003504
145 Ga0265336_10000537
146 Ga0265336_10000652
147 Ga0265338_10000482
148 Ga0265338_10000925
149 Ga0265338_10001653
150 Ga0265338_10011429
151 Ga0265338_10032260
152 Ga0265324_10000345
153 Ga0265324_10005177
154 Ga0265339_10003026
155 Ga0265339_10020542
156 Ga0265331_10007904
157 Ga0265316_10001231
158 Ga0265313_10000365
159 Ga0265313_10018434
160 Ga0316575_10008193
161 Ga0265314_10035678
162 Ga0265314_10042835
163 Ga0265342_10009039
164 Ga0316576_10022040
165 Ga0316576_10030232
166 Ga0307415_100020251
167 Ga0316580_10003263
168 Ga0316580_10003492
169 Ga0316574_0024243
170 Ga0373937_0043088
171 Ga0316584_0006744
172 Ga0316584_0031175
173 Ga0436364_0059440
174 Ga0436365_0680264
175 Ga0466966_0010560
176 Ga0466963_0035701
177 Ga0466971_0002653
178 Ga0466957_0013921
179 Ga0466959_0000616
180 Ga0466959_0006447
181 Ga0466958_0000718
182 Ga0466967_0049531
183 Ga0495592_0021823
184 Ga0495580_0000723
185 Ga0495608_0020038
186 Ga0495618_0001023
187 Ga0495628_0000481
188 Ga0495599_0043010
189 Ga0495674_0000811
190 Ga0495684_0005020
191 Ga0495602_0021635
192 Ga0495682_0015626
193 Ga0501031_0000659
194 Ga0501031_0023550
195 Ga0501034_0008054
196 Ga0501034_0009198
197 Ga0501034_0017643
198 Ga0501036_0003958
199 Ga0501037_0000789
200 Ga0501039_0013017
201 Ga0501041_0005414
202 Ga0501043_0006703
203 Ga0501075_0023098
204 Ga0501223_000017
205 Ga0501223_000035
206 Ga0501224_000029
207 Ga0501225_0000004
208 Ga0501225_0000026
209 Ga0501234_001269
210 Ga0501081_0015319
211 Ga0501083_0001309
212 Ga0501044_0025887
213 Ga0501226_000052
214 nmdc:mga00v17_1130_c1
215 nmdc:mga07m45_6987_c1
216 Ga0590071_002213
217 Ga0466962_0010345
218 Ga0530510_0000305
219 3006425666
220 2513712647
221 2515644957
222 2600812746
223 2657685044
224 2804754879
225 2891401005
226 2891560026
227 2919140082
228 2920883160
229 3005451929
230 8018128547

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00391

PEP-utilizers

PEP-utilising enzyme, mobile domain

429

500

0.98

PF01326

PPDK_N

Pyruvate phosphate dikinase, AMP/ATP-binding domain

57

394

0.97

PF02896

PEP-utilizers_C

PEP-utilising enzyme, PEP-binding domain

733

863

0.95

PF02896

PEP-utilizers_C

PEP-utilising enzyme, PEP-binding domain

512

719

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
8a8e-assembly1.cif.gz_A ppsa c terminal octahedral structure 0.9295 477 796
5hv6-assembly2.cif.gz_B the atp binding domain of rifampin phosphotransferase from listeria monocytogenes 0.9172 7 334
8a8e-assembly1.cif.gz_A ppsa c terminal octahedral structure 0.9059 477 796
5hv6-assembly1.cif.gz_A the atp binding domain of rifampin phosphotransferase from listeria monocytogenes 0.9012 7 334
5hv6-assembly2.cif.gz_B the atp binding domain of rifampin phosphotransferase from listeria monocytogenes 0.8991 7 334
ID Description Score Start End Superfamily
af_P23538_480_791_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9808 479 789 3.20.20.60
af_P23538_361_479_3.50.30.10 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;Phosphohistidine domain 0.9733 361 476 3.50.30.10
af_P23538_480_791_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9715 479 789 3.20.20.60
2e28A04 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;Phosphohistidine domain 0.9626 357 467 3.50.30.10
2olsA02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9603 197 336 3.30.470.20
ID Description Score Start End GO Terms
AF-A0A3N5I504-F1-model_v4 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.9911 644 759 GO:0005524
GO:0006090
GO:0008986
GO:0046872
AF-A0A7R7HCE4-F1-model_v4 Phosphoenolpyruvate synthase (PEP synthase) (EC 2.7.9.2) (Pyruvate, water dikinase) 0.9909 6 796 GO:0005524
GO:0006090
GO:0006094
GO:0008986
GO:0046872
AF-A0A2S9GJ93-F1-model_v4 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.9909 666 748 GO:0005524
GO:0006090
GO:0008986
GO:0046872
AF-A0A0F9YA75-F1-model_v4 Phosphoenolpyruvate synthase 0.9895 534 795 GO:0005524
GO:0006090
GO:0008986
GO:0046872
AF-A0A1D3RQM7-F1-model_v4 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.9877 512 795 GO:0005524
GO:0006090
GO:0008986
GO:0046872

Map