F088864

General Info

Members Datasets Scaffolds Average Seq Length
116 88 232 729

Family's Representative Sequence

Representative Sequence 3300031241|Ga0265325_10007594|Ga0265325_100075945
Length 810
Sequence VDYTSVHRPAMTVVQSRSEVAAAPASAFAVDPVCGMKVDLSKDKPTFDYRGVTYHFCSAGCRSKFAADPEKYVAKAAGAAPPLTGEGAGPSASMHTHGDDHSGATLCTCPMHPEIVRDAPGSCPICGMALEPMVASLDGAPNPELRDMTRRFAVSAPLAVILLVLDMAEHIFGVDLLPFLPPVAHQWLELVLAVPAVLWAGWPFFVRGARSFVVLRLNMFTLIALGTGAAFLYSLAAVLAPGIFSPAMRDMHGLVPLYFESAAVITALVLLGQVLELRARDETGGAVRALLKRAPAVARRVAADDSAHEVPLADIVPGDVLRVRPGDLVPLDGVVATGASSVDESLITGEPIPVEKSAGAAVTGGTVNGTGSFDMRVERTGAATTLARIVALVAEAQRTRAPIQSLADRVSAWFVPAVIIIAIAAFAAWYAFGPAPGLPNALVAALSVLIIACPCALGLATPISIMVATGRGATAGVLVRNAAALARLAAADTAVLDKTGTLTEGRPTVVAVEPYPGFAASDVLALAAAVEQGSEHPLAAAIVRAAAEGKLTLQRAEGFAAVPGKGVGAAVGGRRIALGNAAMMADIGAPLGDSAATGKASERRDSGDTVMFLAVDGRPAGFLAVADPLRATAAGALTALRELGLSPVIASGDSRATVEAVAHRLGVAAAHGEVTPEGKATLVHELQKAGHRVVMAGDGVNDAPALAAADVGVAMGGGSDVAIANAGLTLLGGDLGALVRARRLAAATMGNIRQNLVFAFVYNFAGIPLAAGLLYPLTGWLLSPMIAAAAMSLSSVSVIANALRLRSTAL

Samples

Sample ID Description Type Environment
1 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
21 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
22 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
30 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
31 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
32 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
33 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
34 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
35 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
36 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
37 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
38 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
39 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
40 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
41 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
42 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
43 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
44 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
45 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
46 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
47 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
48 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
49 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
50 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
51 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
52 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
53 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
54 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
55 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
56 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
60 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
68 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
69 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
70 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
71 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
72 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
73 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
74 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
75 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
76 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
77 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
78 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
81 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
82 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
83 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
84 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
85 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
86 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
87 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
88 2857481737 Nocardioides sp. R-74106 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.28
Metatranscriptomes 0
Isolates 1.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.72
Nodule 0
Rhizoplane 1.72
Rhizosphere 94.83
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265325_10007594 3300031241 Bacteria 6483
2 JGI25406J46586_10001546 3300003203 Bacteria 10866
3 Ga0070658_10004356 3300005327 Bacteria 11548
4 Ga0070690_100000465 3300005330 Bacteria 20315
5 Ga0070661_100002312 3300005344 Bacteria 13088
6 Ga0070659_100036743 3300005366 Bacteria 3819
7 Ga0070709_10030837 3300005434 Bacteria 3221
8 Ga0070694_100008112 3300005444 Bacteria 6416
9 Ga0070698_100005377 3300005471 Bacteria 14002
10 Ga0068853_100005823 3300005539 Bacteria 9706
11 Ga0068853_100060752 3300005539 Bacteria 3266
12 Ga0068856_100076269 3300005614 Bacteria 3322
13 Ga0070702_100003910 3300005615 Bacteria 6753
14 Ga0068852_100007817 3300005616 Bacteria 7828
15 Ga0068852_100008345 3300005616 Bacteria 7628
16 Ga0068851_10000792 3300005834 Bacteria 13628
17 Ga0081539_10000010 3300005985 Bacteria 484386
18 Ga0075428_100037921 3300006844 Bacteria 5303
19 Ga0075429_100024603 3300006880 Bacteria 5226
20 Ga0105240_10000064 3300009093 Bacteria 215932
21 Ga0105245_10002234 3300009098 Bacteria 17538
22 Ga0105245_10028857 3300009098 Bacteria 4897
23 Ga0105241_10000470 3300009174 Bacteria 30476
24 Ga0163163_10006202 3300014325 Bacteria 10429
25 Ga0163163_10055884 3300014325 Bacteria 3902
26 Ga0207695_10000046 3300025913 Bacteria 430344
27 Ga0207657_10007022 3300025919 Bacteria 11585
28 Ga0207687_10001177 3300025927 Bacteria 17869
29 Ga0207667_10001414 3300025949 Bacteria 30056
30 Ga0207639_10004786 3300026041 Bacteria 9131
31 Ga0207702_10070815 3300026078 Bacteria 3000
32 Ga0207674_10066940 3300026116 Bacteria 3617
33 Ga0265313_10006363 3300031595 Bacteria 8396
34 Ga0316575_10008333 3300031665 Bacteria 3772
35 Ga0265314_10007209 3300031711 Bacteria 9675
36 Ga0307406_10005317 3300031901 Bacteria 7045
37 Ga0373934_0000144 3300035086 Bacteria 26016
38 Ga0373933_0003645 3300035724 Bacteria 8533
39 Ga0373947_0010166 3300035725 Bacteria 5403
40 Ga0373937_0000428 3300036401 Bacteria 39151
41 Ga0373925_0050020 3300037068 Bacteria 3117
42 Ga0373925_0106783 3300037068 Bacteria 2159
43 Ga0395900_0009237 3300037418 Bacteria 10110
44 Ga0395898_0060020 3300037466 Bacteria 3697
45 Ga0395905_0022071 3300037471 Bacteria 6021
46 Ga0395905_0045070 3300037471 Bacteria 4137
47 Ga0395901_0057166 3300038443 Bacteria 4058
48 Ga0436365_1261241 3300039437 Bacteria 2665
49 Ga0451577_0050845 3300042876 Bacteria 3699
50 Ga0451577_0069556 3300042876 Bacteria 3139
51 Ga0453684_0000019 3300044712 Bacteria 908702
52 Ga0453684_0010060 3300044712 Bacteria 16263
53 Ga0453684_0136289 3300044712 Bacteria 2938
54 Ga0451576_0146923 3300045051 Bacteria 2458
55 Ga0495580_0004228 3300046472 Bacteria 12076
56 Ga0495635_0002960 3300046663 Bacteria 11661
57 Ga0495604_0016172 3300047317 Bacteria 5962
58 Ga0495680_0009577 3300047322 Bacteria 8701
59 Ga0495684_0016182 3300047471 Bacteria 5742
60 Ga0496103_0052210 3300048906 Bacteria 2532
61 Ga0496109_0078631 3300048912 Bacteria 3037
62 Ga0501031_0000002 3300049568 Bacteria 217588
63 Ga0501032_0000004 3300049569 Bacteria 310855
64 Ga0501033_0000016 3300049570 Bacteria 217458
65 Ga0501033_0090245 3300049570 Bacteria 2242
66 Ga0501034_0000011 3300049571 Bacteria 310855
67 Ga0501034_0000638 3300049571 Bacteria 54454
68 Ga0501036_0000001 3300049572 Bacteria 310855
69 Ga0501037_0000006 3300049573 Bacteria 217461
70 Ga0501038_0000003 3300049574 Bacteria 310855
71 Ga0501038_0025712 3300049574 Bacteria 5244
72 Ga0501038_0045376 3300049574 Bacteria 3815
73 Ga0501039_0000004 3300049575 Bacteria 310855
74 Ga0501040_0000812 3300049576 Bacteria 19463
75 Ga0501040_0072072 3300049576 Bacteria 2386
76 Ga0501041_0056906 3300049577 Bacteria 2390
77 Ga0501042_0004505 3300049578 Bacteria 8891
78 Ga0501042_0009917 3300049578 Bacteria 6364
79 Ga0501042_0075002 3300049578 Bacteria 2420
80 Ga0501043_0000155 3300049579 Bacteria 62570
81 Ga0501046_0053679 3300049580 Bacteria 3173
82 Ga0501047_0001325 3300049581 Bacteria 24266
83 Ga0501047_0063013 3300049581 Bacteria 3577
84 Ga0501067_0001088 3300049583 Bacteria 14648
85 Ga0501067_0011634 3300049583 Bacteria 4873
86 Ga0501068_0020539 3300049584 Bacteria 3849
87 Ga0501070_0046687 3300049586 Bacteria 3601
88 Ga0501072_0049661 3300049588 Bacteria 3302
89 Ga0501073_0028717 3300049589 Bacteria 3974
90 Ga0501074_0024629 3300049590 Bacteria 4372
91 Ga0501074_0028245 3300049590 Bacteria 4065
92 Ga0501075_0004981 3300049591 Bacteria 9060
93 Ga0501076_0034714 3300049592 Bacteria 3944
94 Ga0501080_0026973 3300049742 Bacteria 5341
95 Ga0501081_0014221 3300049743 Bacteria 5247
96 Ga0501083_0002567 3300049744 Bacteria 12486
97 Ga0501083_0020135 3300049744 Bacteria 4642
98 Ga0501083_0074226 3300049744 Bacteria 2260
99 Ga0501035_0000009 3300049822 Bacteria 310827
100 Ga0501035_0000566 3300049822 Bacteria 40951
101 Ga0501035_0058581 3300049822 Bacteria 3432
102 Ga0501035_0090330 3300049822 Bacteria 2696
103 Ga0501044_0000005 3300049823 Bacteria 310855
104 Ga0501045_0026287 3300049824 Bacteria 4186
105 nmdc:mga09592_10778_c1 3300050508 Bacteria 7432
106 nmdc:mga0n895_113250_c1 3300050512 Bacteria 2730
107 Ga0500559_0003300 3300053136 Bacteria 8003
108 Ga0500616_0021021 3300053153 Bacteria 3663
109 Ga0501084_0013221 3300054114 Bacteria 6830
110 Ga0501084_0094622 3300054114 Bacteria 2508
111 Ga0501082_0003674 3300060353 Bacteria 13411
112 Ga0501082_0017035 3300060353 Bacteria 6258
113 Ga0501082_0102445 3300060353 Bacteria 2476
114 Ga0501082_0138448 3300060353 Bacteria 2112
115 2729906183 2728369276 Bacteria 5610032
116 2857483781 2857481737 Bacteria 4761446
117 Ga0265325_10007594
118 JGI25406J46586_10001546
119 Ga0070658_10004356
120 Ga0070690_100000465
121 Ga0070661_100002312
122 Ga0070659_100036743
123 Ga0070709_10030837
124 Ga0070694_100008112
125 Ga0070698_100005377
126 Ga0068853_100005823
127 Ga0068853_100060752
128 Ga0068856_100076269
129 Ga0070702_100003910
130 Ga0068852_100007817
131 Ga0068852_100008345
132 Ga0068851_10000792
133 Ga0081539_10000010
134 Ga0075428_100037921
135 Ga0075429_100024603
136 Ga0105240_10000064
137 Ga0105245_10002234
138 Ga0105245_10028857
139 Ga0105241_10000470
140 Ga0163163_10006202
141 Ga0163163_10055884
142 Ga0207695_10000046
143 Ga0207657_10007022
144 Ga0207687_10001177
145 Ga0207667_10001414
146 Ga0207639_10004786
147 Ga0207702_10070815
148 Ga0207674_10066940
149 Ga0265313_10006363
150 Ga0316575_10008333
151 Ga0265314_10007209
152 Ga0307406_10005317
153 Ga0373934_0000144
154 Ga0373933_0003645
155 Ga0373947_0010166
156 Ga0373937_0000428
157 Ga0373925_0050020
158 Ga0373925_0106783
159 Ga0395900_0009237
160 Ga0395898_0060020
161 Ga0395905_0022071
162 Ga0395905_0045070
163 Ga0395901_0057166
164 Ga0436365_1261241
165 Ga0451577_0050845
166 Ga0451577_0069556
167 Ga0453684_0000019
168 Ga0453684_0010060
169 Ga0453684_0136289
170 Ga0451576_0146923
171 Ga0495580_0004228
172 Ga0495635_0002960
173 Ga0495604_0016172
174 Ga0495680_0009577
175 Ga0495684_0016182
176 Ga0496103_0052210
177 Ga0496109_0078631
178 Ga0501031_0000002
179 Ga0501032_0000004
180 Ga0501033_0000016
181 Ga0501033_0090245
182 Ga0501034_0000011
183 Ga0501034_0000638
184 Ga0501036_0000001
185 Ga0501037_0000006
186 Ga0501038_0000003
187 Ga0501038_0025712
188 Ga0501038_0045376
189 Ga0501039_0000004
190 Ga0501040_0000812
191 Ga0501040_0072072
192 Ga0501041_0056906
193 Ga0501042_0004505
194 Ga0501042_0009917
195 Ga0501042_0075002
196 Ga0501043_0000155
197 Ga0501046_0053679
198 Ga0501047_0001325
199 Ga0501047_0063013
200 Ga0501067_0001088
201 Ga0501067_0011634
202 Ga0501068_0020539
203 Ga0501070_0046687
204 Ga0501072_0049661
205 Ga0501073_0028717
206 Ga0501074_0024629
207 Ga0501074_0028245
208 Ga0501075_0004981
209 Ga0501076_0034714
210 Ga0501080_0026973
211 Ga0501081_0014221
212 Ga0501083_0002567
213 Ga0501083_0020135
214 Ga0501083_0074226
215 Ga0501035_0000009
216 Ga0501035_0000566
217 Ga0501035_0058581
218 Ga0501035_0090330
219 Ga0501044_0000005
220 Ga0501045_0026287
221 nmdc:mga09592_10778_c1
222 nmdc:mga0n895_113250_c1
223 Ga0500559_0003300
224 Ga0500616_0021021
225 Ga0501084_0013221
226 Ga0501084_0094622
227 Ga0501082_0003674
228 Ga0501082_0017035
229 Ga0501082_0102445
230 Ga0501082_0138448
231 2729906183
232 2857483781

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19335

HMBD

Heavy metal binding domain

108

133

0.97

PF00122

E1-E2_ATPase

E1-E2 ATPase

292

475

0.96

PF04945

YHS

YHS domain

29

76

0.94

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

491

710

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2voy-assembly1.cif.gz_F cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus 0.9823 212 318
2voy-assembly1.cif.gz_I cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus 0.941 409 665
2voy-assembly1.cif.gz_J cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus 0.9254 430 550
2voy-assembly1.cif.gz_I cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus 0.9197 409 665
2voy-assembly1.cif.gz_F cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus 0.9142 212 318
ID Description Score Start End Superfamily
af_Q557B5_1074_1224_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9899 549 678 3.40.50.1000
2hc8A00 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9823 212 318 2.70.150.10
af_P9WPS7_255_365_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.978 212 318 2.70.150.10
af_Q4DIX9_393_509_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9745 206 320 2.70.150.10
af_Q59385_307_423_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9726 206 318 2.70.150.10
ID Description Score Start End GO Terms
AF-V5IE67-F1-model_v4 Putative atpase cu++ transporting alpha polypeptide 0.9904 549 682 GO:0005507
GO:0005524
GO:0005802
GO:0005886
GO:0006878
GO:0015677
GO:0016887
GO:0043682
GO:0060003
AF-A0A432JR33-F1-model_v4 deleted 0.9904 231 314
AF-A0A2S9G029-F1-model_v4 Heavy metal translocating P-type ATPase 0.9777 212 294 GO:0005507
GO:0016020
GO:0043682
GO:0055070
AF-V5IE67-F1-model_v4 Putative atpase cu++ transporting alpha polypeptide 0.9759 549 682 GO:0005507
GO:0005524
GO:0005802
GO:0005886
GO:0006878
GO:0015677
GO:0016887
GO:0043682
GO:0060003
AF-A0A3D1LC62-F1-model_v4 Heavy metal translocating P-type ATPase 0.9654 220 303 GO:0005507
GO:0016020
GO:0043682
GO:0055070

Map