F096495

General Info

Members Datasets Scaffolds Average Seq Length
118 89 234 627

Family's Representative Sequence

Representative Sequence 3300005544|Ga0070686_100037197|Ga0070686_1000371972
Length 683
Sequence MRAAVLILPTLAAALFLLPAGGDSAPAVASQANRPAALHLPWKEAGLTEREAAAHLLNRFAYGPRPGEVDAVVKMGLDRWFERQLAADLPDRQVDELLRRLPVLRLSADEIAETYPSPGLVFREAQEAGVIPEGIQGKKGADDSERLQVREAVQRWASRQGYHPQRELIGQLMTQKLDRAVLSENQLAEVMTDFWFNHFNVSTTDNKSRPWLLSYERDAIRPHALGRVRDLLEATARHPAMLLYLDNAQSTAAAEATTTLENEIRARAPRRGAGFYAMGRRGGPAAGDEFSKSIAAPRRQPNRRQGLNENYARELMELHTLGVEGGYTQKDVVEVARAFTGWSLIPPRRREQAERRLDRVQRLGGLGFERDGAFLFRADVHDAGTKTVLGKRLPAGRGIEDGEDVLDLLGVHPSTARHLATKLAVRFVSDQPPQALIDRLTAVYQQSGGDTRTLLRTIAEAPEFWSRQTLGAKIKSPFELAASAIRATGGRIESPRTTLQWISRMGQPLYAYQAPTGYPDRAAAWVNTGSLLSRMSFGLQLASGRVDGVDLDLPALHSGREPASREEALRVYAGLLMPGRALDPVLEQLGPMVADPGLAQRIDAAAPGEETAAGSAMAGAMDQDETIDAPPQRPGRKGLKELGGKKGRWDERSEISPPHDLHPPTPLEQVVGVILGSPEFQRR

Samples

Sample ID Description Type Environment
1 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
18 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
19 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
22 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
23 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
24 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
25 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
29 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
30 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
31 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
33 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
34 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
43 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
44 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
45 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
46 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
47 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
48 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
49 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
50 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
51 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
52 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
53 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
54 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
55 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
56 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
57 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
58 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
59 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
60 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
61 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
62 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
63 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
64 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
65 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
66 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
69 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
70 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
71 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
72 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
73 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
74 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
75 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
76 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
77 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
78 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
79 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
80 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
81 2738541284 Pedobacter sp. YR016 Isolate Unclassified
82 2738543023 Pedobacter sp. OK628 Isolate Unclassified
83 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
84 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
85 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
86 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
87 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
88 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
89 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.83
Metatranscriptomes 0.85
Isolates 9.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.08
Nodule 0
Rhizoplane 0.85
Rhizosphere 80.51
Stem 0
Stem Tuber 0
Unclassified 0.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070686_100037197 3300005544 Bacteria 3018
2 SwRhRL2b_contig_1948121 2162886007 Bacteria 77420
3 rootH2_10001414 3300003320 Bacteria 59840
4 rootH2_10008225 3300003320 Bacteria 14923
5 rootH2_10054802 3300003320 Bacteria 17503
6 rootL2_10009645 3300003322 Bacteria 7902
7 rootH1_10218449 3300003323 Bacteria 9817
8 Ga0065714_10002398 3300005288 Bacteria 45890
9 Ga0065714_10064528 3300005288 Bacteria 41587
10 Ga0065714_10064745 3300005288 Bacteria 20344
11 Ga0065704_10070196 3300005289 Bacteria 94899
12 Ga0065704_10103590 3300005289 Bacteria 2167
13 Ga0070676_10027908 3300005328 Bacteria 3205
14 Ga0070669_100000051 3300005353 Bacteria 114909
15 Ga0070659_100001238 3300005366 Bacteria 18539
16 Ga0070709_10000004 3300005434 Bacteria 214262
17 Ga0070663_100038785 3300005455 Bacteria 3325
18 Ga0070685_10001331 3300005466 Bacteria 12975
19 Ga0070684_100012509 3300005535 Bacteria 6806
20 Ga0070665_100003143 3300005548 Bacteria 17761
21 Ga0068855_100014663 3300005563 Bacteria 9441
22 Ga0070716_100061356 3300006173 Bacteria 2175
23 Ga0075434_100005067 3300006871 Bacteria 11960
24 Ga0075434_100047910 3300006871 Bacteria 4241
25 Ga0075434_100064425 3300006871 Bacteria 3649
26 Ga0075436_100000309 3300006914 Bacteria 31190
27 Ga0075436_100010790 3300006914 Bacteria 6267
28 Ga0075436_100012309 3300006914 Bacteria 5862
29 Ga0105240_10000063 3300009093 Bacteria 215936
30 Ga0105237_10003022 3300009545 Bacteria 20297
31 Ga0105239_10000126 3300010375 Bacteria 107921
32 Ga0157373_10000075 3300013100 Bacteria 85818
33 Ga0157373_10000125 3300013100 Bacteria 59653
34 Ga0157373_10000188 3300013100 Bacteria 50875
35 Ga0157371_10000575 3300013102 Bacteria 43514
36 Ga0157371_10001519 3300013102 Bacteria 23982
37 Ga0157371_10008186 3300013102 Bacteria 8359
38 Ga0157369_10008102 3300013105 Bacteria 12042
39 Ga0157374_10000001 3300013296 Bacteria 1077351
40 Ga0157372_10000042 3300013307 Bacteria 157651
41 Ga0157372_10000329 3300013307 Bacteria 51970
42 Ga0157372_10000458 3300013307 Bacteria 44772
43 Ga0157372_10037016 3300013307 Bacteria 5380
44 Ga0157372_10040102 3300013307 Bacteria 5170
45 Ga0182008_10000002 3300014497 Bacteria 480216
46 Ga0157376_10007313 3300014969 Bacteria 7867
47 Ga0182006_1006278 3300015261 Bacteria 5539
48 Ga0206352_10526423 3300020078 Bacteria 2424
49 Ga0213876_10022492 3300021384 Bacteria 3332
50 Ga0209026_1000762 3300025250 Bacteria 18053
51 Ga0209026_1004202 3300025250 Bacteria 4388
52 Ga0209026_1006868 3300025250 Bacteria 2686
53 Ga0207699_10000033 3300025906 Bacteria 137438
54 Ga0207695_10000133 3300025913 Bacteria 222573
55 Ga0207681_10000043 3300025923 Bacteria 136641
56 Ga0207690_10000943 3300025932 Bacteria 18615
57 Ga0207667_10054224 3300025949 Bacteria 4217
58 Ga0207678_10016607 3300026067 Bacteria 6467
59 Ga0207702_10020942 3300026078 Bacteria 5412
60 Ga0268266_10006946 3300028379 Bacteria 10291
61 Ga0307408_100001060 3300031548 Bacteria 21119
62 Ga0307508_10002295 3300031616 Bacteria 20303
63 Ga0307412_10000038 3300031911 Bacteria 187857
64 Ga0307414_10000281 3300032004 Bacteria 30115
65 Ga0307414_10009004 3300032004 Bacteria 5706
66 Ga0373929_0000012 3300035085 Bacteria 169316
67 Ga0373946_0002715 3300035171 Bacteria 6256
68 Ga0373961_0002178 3300035241 Bacteria 5197
69 Ga0373935_0002209 3300035692 Bacteria 11061
70 Ga0373925_0000479 3300037068 Bacteria 39974
71 Ga0395899_0000401 3300037312 Bacteria 50789
72 Ga0436365_1684945 3300039437 Bacteria 47686
73 Ga0466959_0041595 3300045049 Bacteria 3392
74 Ga0466958_0042761 3300045836 Bacteria 2729
75 Ga0495629_0000010 3300046459 Bacteria 340114
76 Ga0495606_0005773 3300046507 Bacteria 11704
77 Ga0495666_0000124 3300046526 Bacteria 32348
78 Ga0495586_0000641 3300046535 Bacteria 20128
79 Ga0495668_0005629 3300046616 Bacteria 8416
80 Ga0495635_0024676 3300046663 Bacteria 4190
81 Ga0495600_0016572 3300046809 Bacteria 4680
82 Ga0495680_0039249 3300047322 Bacteria 3778
83 Ga0495684_0117518 3300047471 Bacteria 2004
84 Ga0495686_0000078 3300047472 Bacteria 203927
85 Ga0496114_0000015 3300048917 Bacteria 278139
86 Ga0501034_0018023 3300049571 Bacteria 7244
87 Ga0501034_0106595 3300049571 Unclassified 2795
88 Ga0501047_0093431 3300049581 Bacteria 2887
89 Ga0501068_0008304 3300049584 Bacteria 5773
90 Ga0501075_0000480 3300049591 Bacteria 23800
91 Ga0501077_0000367 3300049593 Bacteria 26934
92 Ga0501080_0070380 3300049742 Bacteria 3253
93 Ga0501083_0006420 3300049744 Bacteria 8339
94 nmdc:mga0n895_1178_c1 3300050512 Bacteria 19184
95 nmdc:mga0n895_133149_c1 3300050512 Bacteria 2512
96 nmdc:mga0n895_3312_c1 3300050512 Bacteria 12940
97 nmdc:mga0n895_34255_c1 3300050512 Bacteria 4886
98 nmdc:mga08x19_198_c1 3300050514 Bacteria 46285
99 Ga0500651_0001128 3300053093 Bacteria 13219
100 Ga0500604_0010216 3300053151 Bacteria 2508
101 Ga0500622_0000113 3300053156 Bacteria 83196
102 Ga0500622_0000133 3300053156 Bacteria 78532
103 Ga0500622_0001713 3300053156 Bacteria 17002
104 Ga0500624_000557 3300053157 Bacteria 10448
105 Ga0501082_0000081 3300060353 Bacteria 71114
106 Ga0466962_0024385 3300061719 Bacteria 2906
107 2738761891 2738541284 Bacteria 5199923
108 2739302179 2738543023 Bacteria 6767879
109 2739304912 2738543023 Bacteria 6767879
110 2776615464 2775506987 Bacteria 5373360
111 2852629261 2852627209 Bacteria 5896285
112 2852630823 2852627209 Bacteria 5896285
113 2890737445 2890737413 Bacteria 4269751
114 2898716502 2898713307 Bacteria 4110805
115 2919188798 2919186247 Bacteria 6244071
116 2929159997 2929154850 Bacteria 6753285
117 2939667047 2939664404 Bacteria 6364494
118 Ga0070686_100037197
119 SwRhRL2b_contig_1948121
120 rootH2_10001414
121 rootH2_10008225
122 rootH2_10054802
123 rootL2_10009645
124 rootH1_10218449
125 Ga0065714_10002398
126 Ga0065714_10064528
127 Ga0065714_10064745
128 Ga0065704_10070196
129 Ga0065704_10103590
130 Ga0070676_10027908
131 Ga0070669_100000051
132 Ga0070659_100001238
133 Ga0070709_10000004
134 Ga0070663_100038785
135 Ga0070685_10001331
136 Ga0070684_100012509
137 Ga0070665_100003143
138 Ga0068855_100014663
139 Ga0070716_100061356
140 Ga0075434_100005067
141 Ga0075434_100047910
142 Ga0075434_100064425
143 Ga0075436_100000309
144 Ga0075436_100010790
145 Ga0075436_100012309
146 Ga0105240_10000063
147 Ga0105237_10003022
148 Ga0105239_10000126
149 Ga0157373_10000075
150 Ga0157373_10000125
151 Ga0157373_10000188
152 Ga0157371_10000575
153 Ga0157371_10001519
154 Ga0157371_10008186
155 Ga0157369_10008102
156 Ga0157374_10000001
157 Ga0157372_10000042
158 Ga0157372_10000329
159 Ga0157372_10000458
160 Ga0157372_10037016
161 Ga0157372_10040102
162 Ga0182008_10000002
163 Ga0157376_10007313
164 Ga0182006_1006278
165 Ga0206352_10526423
166 Ga0213876_10022492
167 Ga0209026_1000762
168 Ga0209026_1004202
169 Ga0209026_1006868
170 Ga0207699_10000033
171 Ga0207695_10000133
172 Ga0207681_10000043
173 Ga0207690_10000943
174 Ga0207667_10054224
175 Ga0207678_10016607
176 Ga0207702_10020942
177 Ga0268266_10006946
178 Ga0307408_100001060
179 Ga0307508_10002295
180 Ga0307412_10000038
181 Ga0307414_10000281
182 Ga0307414_10009004
183 Ga0373929_0000012
184 Ga0373946_0002715
185 Ga0373961_0002178
186 Ga0373935_0002209
187 Ga0373925_0000479
188 Ga0395899_0000401
189 Ga0436365_1684945
190 Ga0466959_0041595
191 Ga0466958_0042761
192 Ga0495629_0000010
193 Ga0495606_0005773
194 Ga0495666_0000124
195 Ga0495586_0000641
196 Ga0495668_0005629
197 Ga0495635_0024676
198 Ga0495600_0016572
199 Ga0495680_0039249
200 Ga0495684_0117518
201 Ga0495686_0000078
202 Ga0496114_0000015
203 Ga0501034_0018023
204 Ga0501034_0106595
205 Ga0501047_0093431
206 Ga0501068_0008304
207 Ga0501075_0000480
208 Ga0501077_0000367
209 Ga0501080_0070380
210 Ga0501083_0006420
211 nmdc:mga0n895_1178_c1
212 nmdc:mga0n895_133149_c1
213 nmdc:mga0n895_3312_c1
214 nmdc:mga0n895_34255_c1
215 nmdc:mga08x19_198_c1
216 Ga0500651_0001128
217 Ga0500604_0010216
218 Ga0500622_0000113
219 Ga0500622_0000133
220 Ga0500622_0001713
221 Ga0500624_000557
222 Ga0501082_0000081
223 Ga0466962_0024385
224 2738761891
225 2739302179
226 2739304912
227 2776615464
228 2852629261
229 2852630823
230 2890737445
231 2898716502
232 2919188798
233 2929159997
234 2939667047

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08811

DUF1800

Protein of unknown function (DUF1800)

55

682

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7sgr-assembly1.cif.gz_F structure of hemolysin a secretion system hlyb/d complex 0.1603 65 489
1ibr-assembly2.cif.gz_D complex of ran with importin beta 0.1348 43 579
7tgh-assembly1.cif.gz_5 cryo-em structure of respiratory super-complex ci+iii2 from tetrahymena thermophila 0.1286 158 620
1ibr-assembly2.cif.gz_D complex of ran with importin beta 0.1259 43 579
8pm6-assembly1.cif.gz_A human bile salt export pump (bsep) in complex with inhibitor gbm in nanodiscs 0.1241 74 625
ID Description Score Start End Superfamily
af_Q7XUW7_24_192_1.20.140.40 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Invertase/pectin methylesterase inhibitor family protein 0.2292 445 619 1.20.140.40
3rv0C02 Mainly Alpha;Orthogonal Bundle;Ribonuclease iii, N-terminal Endonuclease Domain; Chain A;Ribonuclease III domain 0.2264 493 620 1.10.1520.10
af_Q7XUW7_24_192_1.20.140.40 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Invertase/pectin methylesterase inhibitor family protein 0.2253 445 619 1.20.140.40
af_K9M1U5_25_179_1.20.1250.60 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;Interferon lambda 0.2237 450 625 1.20.1250.60
af_P09586_37_222_1.20.1250.10 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;; 0.2167 446 626 1.20.1250.10
ID Description Score Start End GO Terms
AF-A0A7W1ZUZ1-F1-model_v4 DUF1800 domain-containing protein 0.9478 34 428
AF-A0A4Q3RP05-F1-model_v4 DUF1800 domain-containing protein 0.9414 183 554
AF-A0A258UE59-F1-model_v4 DUF1800 domain-containing protein 0.9396 31 627
AF-A0A534NCV6-F1-model_v4 DUF1800 domain-containing protein 0.9368 155 627
AF-A0A519UY53-F1-model_v4 DUF1800 domain-containing protein 0.9336 123 586

Map