F096517

General Info

Members Datasets Scaffolds Average Seq Length
118 82 236 513

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100000146|Ga0070665_100000146109
Length 579
Sequence MPASTEHTHRLPSVEKGREPDVTPEGTRLPRPFVADQDFFWGVATSGYQAEGGYNGPNEPRNNWAWAEHRGEVVPSGRTSDFWTLANEDFGRCRDMGLNSFRMSIEWSRVQPCTELGPTEGSGAEPPPFDERALYSYAQRIAECRAHGLEPIITLHHFVHPAWLGLDAWLKPETIDRYLAFVKHTLTYFLRTLPHDFGCEPPRWFITINEPNLLAFNHYLYRLFPSEHMIGLDPTVQCLAHLLETHVRAYRLIHELYADSATKPMVSFNNYCSDLYWSDSAMLDLLFAPSRQVPRERIQEDLAERAASFDEHFKSAKLFPTQGLRYFLGQWIKGIHHTVAKRGFAMPCWDRFLTLLYERTEVPLDYIAFDYYDPFCAHALRWPSWHDFETRKRSFRDWMLESVASKWWDWHMLPEGLAFFVKHFGRFGLPVLIAENGMALRRLPDNRPFKRRDNVARSQYLREHVRVVSRLVERGQPLIGYLHWSLFDNYEWGSFAPRFGLFSLDYTVYPTRHAVDVTGDNPSATYAQEIRDAKAQFAGAARRAGKKTGPRDDPASGATPATNITGTRESNILPTDSVQ

Samples

Sample ID Description Type Environment
1 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
28 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
29 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
30 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
31 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
43 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
47 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
48 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
49 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
50 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
51 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
52 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
53 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
54 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
55 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
56 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
57 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
58 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
59 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
60 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
61 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
62 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
72 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
74 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
75 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
76 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
77 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
78 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
79 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
80 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
81 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
82 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.15
Metatranscriptomes 0
Isolates 0.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.32
Nodule 0
Rhizoplane 0
Rhizosphere 71.19
Stem 0
Stem Tuber 0
Unclassified 9.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070665_100000146 3300005548 Bacteria 131012
2 rootH2_10005096 3300003320 Bacteria 23257
3 rootH2_10024132 3300003320 Bacteria 4535
4 rootH2_10024133 3300003320 Bacteria 5462
5 rootH2_10025364 3300003320 Bacteria 8132
6 rootL2_10020517 3300003322 Bacteria 3125
7 rootL2_10020518 3300003322 Unclassified 3479
8 rootL2_10224257 3300003322 Bacteria 7581
9 rootH1_10044050 3300003323 Bacteria 18531
10 Ga0070658_10000785 3300005327 Bacteria 27211
11 Ga0070661_100000247 3300005344 Bacteria 44372
12 Ga0070659_100009209 3300005366 Bacteria 7247
13 Ga0070708_100012452 3300005445 Bacteria 6943
14 Ga0070708_100035044 3300005445 Bacteria 4370
15 Ga0070706_100000876 3300005467 Bacteria 33053
16 Ga0070706_100041091 3300005467 Unclassified 4270
17 Ga0070707_100007973 3300005468 Bacteria 9836
18 Ga0070698_100065487 3300005471 Bacteria 3659
19 Ga0070699_100035766 3300005518 Unclassified 4293
20 Ga0070697_100004048 3300005536 Bacteria 11252
21 Ga0070697_100091056 3300005536 Bacteria 2521
22 Ga0068855_100008072 3300005563 Bacteria 12720
23 Ga0068856_100103533 3300005614 Unclassified 2840
24 Ga0068863_100001630 3300005841 Bacteria 22177
25 Ga0068863_100101049 3300005841 Unclassified 2741
26 Ga0068860_100000107 3300005843 Bacteria 133502
27 Ga0081538_10055788 3300005981 Unclassified 2321
28 Ga0081540_1013198 3300005983 Bacteria 5387
29 Ga0070717_10016767 3300006028 Bacteria 5686
30 Ga0075363_100002607 3300006048 Bacteria 7430
31 Ga0068871_100115824 3300006358 Bacteria 2259
32 Ga0105240_10000057 3300009093 Bacteria 222664
33 Ga0105237_10002088 3300009545 Bacteria 25252
34 Ga0105237_10139588 3300009545 Bacteria 2418
35 Ga0105237_10192398 3300009545 Bacteria 2040
36 Ga0105249_10207796 3300009553 Bacteria 1919
37 Ga0105239_10058736 3300010375 Bacteria 4221
38 Ga0157374_10000041 3300013296 Bacteria 150386
39 Ga0157374_10139468 3300013296 Bacteria 2353
40 Ga0157376_10000129 3300014969 Bacteria 52119
41 Ga0213872_10000478 3300021361 Bacteria 32337
42 Ga0213876_10000942 3300021384 Bacteria 19170
43 Ga0213876_10017983 3300021384 Bacteria 3729
44 Ga0209050_1000791 3300025298 Bacteria 44895
45 Ga0207684_10000650 3300025910 Bacteria 41194
46 Ga0207684_10032616 3300025910 Unclassified 4428
47 Ga0207695_10000072 3300025913 Bacteria 312795
48 Ga0207671_10004880 3300025914 Bacteria 12607
49 Ga0207671_10080313 3300025914 Bacteria 2444
50 Ga0207649_10002610 3300025920 Bacteria 10010
51 Ga0207646_10062942 3300025922 Unclassified 3312
52 Ga0207703_10017911 3300026035 Bacteria 5532
53 Ga0207639_10116716 3300026041 Bacteria 2186
54 Ga0207641_10003859 3300026088 Bacteria 13122
55 Ga0268266_10003622 3300028379 Bacteria 15284
56 Ga0268264_10000501 3300028381 Bacteria 50746
57 Ga0265319_1000865 3300028563 Bacteria 19248
58 Ga0265331_10013412 3300031250 Bacteria 4408
59 Ga0265327_10000247 3300031251 Bacteria 107636
60 Ga0265327_10000885 3300031251 Bacteria 44235
61 Ga0265327_10003093 3300031251 Bacteria 16422
62 Ga0265316_10006091 3300031344 Bacteria 11573
63 Ga0307508_10000006 3300031616 Bacteria 275479
64 Ga0316576_10020815 3300031727 Unclassified 4525
65 Ga0395899_0000122 3300037312 Bacteria 123909
66 Ga0436364_0977265 3300037853 Bacteria 4810
67 Ga0436364_1287802 3300037853 Bacteria 3026
68 Ga0395901_0144123 3300038443 Bacteria 2504
69 Ga0436365_0156389 3300039437 Bacteria 3456
70 Ga0436365_0439611 3300039437 Bacteria 30321
71 Ga0436365_0441002 3300039437 Bacteria 19263
72 Ga0436365_0551296 3300039437 Bacteria 9922
73 Ga0436365_1075900 3300039437 Bacteria 4882
74 Ga0436365_1254526 3300039437 Bacteria 3876
75 Ga0436360_0249538 3300039438 Bacteria 2348
76 Ga0436360_0956601 3300039438 Bacteria 2167
77 Ga0436360_1068122 3300039438 Bacteria 5664
78 Ga0436361_0413138 3300039447 Bacteria 14795
79 Ga0436361_0528354 3300039447 Bacteria 23049
80 Ga0436361_0869837 3300039447 Bacteria 3899
81 Ga0436361_1127418 3300039447 Bacteria 3865
82 Ga0436363_1179741 3300039450 Bacteria 13484
83 Ga0436363_1334172 3300039450 Bacteria 10290
84 Ga0451577_0018317 3300042876 Bacteria 6453
85 Ga0466971_0000020 3300044719 Bacteria 78865
86 Ga0466957_0035394 3300044842 Unclassified 2996
87 Ga0451576_0011857 3300045051 Bacteria 9863
88 Ga0495643_0000265 3300046522 Bacteria 76016
89 Ga0495669_0013443 3300046684 Unclassified 3488
90 Ga0496125_0000087 3300048928 Bacteria 215983
91 Ga0501031_0000934 3300049568 Bacteria 17651
92 Ga0501032_0000066 3300049569 Bacteria 90565
93 Ga0501032_0057137 3300049569 Archaea 2622
94 Ga0501033_0000013 3300049570 Bacteria 232799
95 Ga0501033_0000024 3300049570 Bacteria 175859
96 Ga0501036_0131882 3300049572 Archaea 2109
97 Ga0501037_0000002 3300049573 Bacteria 292291
98 Ga0501038_0000634 3300049574 Bacteria 31252
99 Ga0501038_0000821 3300049574 Bacteria 27648
100 Ga0501039_0052720 3300049575 Archaea 3147
101 Ga0501043_0000470 3300049579 Bacteria 35998
102 Ga0501043_0000692 3300049579 Bacteria 29807
103 Ga0501047_0005031 3300049581 Bacteria 12408
104 Ga0501070_0006617 3300049586 Bacteria 9863
105 Ga0501070_0059644 3300049586 Bacteria 3163
106 Ga0501035_0000007 3300049822 Bacteria 359281
107 Ga0501044_0000259 3300049823 Bacteria 67115
108 nmdc:mga03683_1459_c1 3300050489 Bacteria 7060
109 nmdc:mga03n38_842_c1 3300050490 Bacteria 8218
110 nmdc:mga0k408_109_c1 3300050493 Bacteria 39236
111 nmdc:mga0k408_2041_c1 3300050493 Bacteria 10807
112 Ga0500555_000003 3300053103 Bacteria 392994
113 Ga0500555_000218 3300053103 Bacteria 26472
114 Ga0500556_0000010 3300053104 Bacteria 258288
115 Ga0500642_0040646 3300053130 Bacteria 2007
116 Ga0500616_0024237 3300053153 Bacteria 3374
117 Ga0466962_0000017 3300061719 Bacteria 97361
118 2787507245 2786546548 Bacteria 4745694
119 Ga0070665_100000146
120 rootH2_10005096
121 rootH2_10024132
122 rootH2_10024133
123 rootH2_10025364
124 rootL2_10020517
125 rootL2_10020518
126 rootL2_10224257
127 rootH1_10044050
128 Ga0070658_10000785
129 Ga0070661_100000247
130 Ga0070659_100009209
131 Ga0070708_100012452
132 Ga0070708_100035044
133 Ga0070706_100000876
134 Ga0070706_100041091
135 Ga0070707_100007973
136 Ga0070698_100065487
137 Ga0070699_100035766
138 Ga0070697_100004048
139 Ga0070697_100091056
140 Ga0068855_100008072
141 Ga0068856_100103533
142 Ga0068863_100001630
143 Ga0068863_100101049
144 Ga0068860_100000107
145 Ga0081538_10055788
146 Ga0081540_1013198
147 Ga0070717_10016767
148 Ga0075363_100002607
149 Ga0068871_100115824
150 Ga0105240_10000057
151 Ga0105237_10002088
152 Ga0105237_10139588
153 Ga0105237_10192398
154 Ga0105249_10207796
155 Ga0105239_10058736
156 Ga0157374_10000041
157 Ga0157374_10139468
158 Ga0157376_10000129
159 Ga0213872_10000478
160 Ga0213876_10000942
161 Ga0213876_10017983
162 Ga0209050_1000791
163 Ga0207684_10000650
164 Ga0207684_10032616
165 Ga0207695_10000072
166 Ga0207671_10004880
167 Ga0207671_10080313
168 Ga0207649_10002610
169 Ga0207646_10062942
170 Ga0207703_10017911
171 Ga0207639_10116716
172 Ga0207641_10003859
173 Ga0268266_10003622
174 Ga0268264_10000501
175 Ga0265319_1000865
176 Ga0265331_10013412
177 Ga0265327_10000247
178 Ga0265327_10000885
179 Ga0265327_10003093
180 Ga0265316_10006091
181 Ga0307508_10000006
182 Ga0316576_10020815
183 Ga0395899_0000122
184 Ga0436364_0977265
185 Ga0436364_1287802
186 Ga0395901_0144123
187 Ga0436365_0156389
188 Ga0436365_0439611
189 Ga0436365_0441002
190 Ga0436365_0551296
191 Ga0436365_1075900
192 Ga0436365_1254526
193 Ga0436360_0249538
194 Ga0436360_0956601
195 Ga0436360_1068122
196 Ga0436361_0413138
197 Ga0436361_0528354
198 Ga0436361_0869837
199 Ga0436361_1127418
200 Ga0436363_1179741
201 Ga0436363_1334172
202 Ga0451577_0018317
203 Ga0466971_0000020
204 Ga0466957_0035394
205 Ga0451576_0011857
206 Ga0495643_0000265
207 Ga0495669_0013443
208 Ga0496125_0000087
209 Ga0501031_0000934
210 Ga0501032_0000066
211 Ga0501032_0057137
212 Ga0501033_0000013
213 Ga0501033_0000024
214 Ga0501036_0131882
215 Ga0501037_0000002
216 Ga0501038_0000634
217 Ga0501038_0000821
218 Ga0501039_0052720
219 Ga0501043_0000470
220 Ga0501043_0000692
221 Ga0501047_0005031
222 Ga0501070_0006617
223 Ga0501070_0059644
224 Ga0501035_0000007
225 Ga0501044_0000259
226 nmdc:mga03683_1459_c1
227 nmdc:mga03n38_842_c1
228 nmdc:mga0k408_109_c1
229 nmdc:mga0k408_2041_c1
230 Ga0500555_000003
231 Ga0500555_000218
232 Ga0500556_0000010
233 Ga0500642_0040646
234 Ga0500616_0024237
235 Ga0466962_0000017
236 2787507245

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00232

Glyco_hydro_1

Glycosyl hydrolase family 1

32

533

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
6z1h-assembly1.cif.gz_B ancestral glycosidase (family 1) 0.8378 5 502
6z1h-assembly1.cif.gz_A ancestral glycosidase (family 1) 0.8229 1 502
6z1h-assembly1.cif.gz_A ancestral glycosidase (family 1) 0.8089 1 502
6z1h-assembly1.cif.gz_B ancestral glycosidase (family 1) 0.8081 5 502
1np2-assembly2.cif.gz_B crystal structure of thermostable beta-glycosidase from thermophilic eubacterium thermus nonproteolyticus hg102 0.786 2 501
ID Description Score Start End Superfamily
af_A0A1D6PHF5_27_269_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.7836 5 219 3.20.20.80
af_F1Q8B5_57_238_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.7656 51 246 3.20.20.80
1vffA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.7634 5 502 3.20.20.80
af_D3Z8T6_78_361_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.7577 1 274 3.20.20.80
af_Q7XSK1_17_299_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.7534 5 248 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A2T1M0E3-F1-model_v4 Glycoside hydrolase family 1 protein 0.9641 4 506 GO:0005829
GO:0008422
GO:0030245
AF-B4D0P6-F1-model_v4 Glycoside hydrolase family 1 0.9636 3 504 GO:0005829
GO:0008422
GO:0030245
AF-A0A2A2R1P8-F1-model_v4 Beta-glucosidase 0.95 5 499 GO:0005829
GO:0008422
GO:0030245
AF-A0A2A2Q9L7-F1-model_v4 Beta-glucosidase 0.9459 2 504 GO:0005829
GO:0008422
GO:0030245
AF-B4D0P6-F1-model_v4 Glycoside hydrolase family 1 0.943 3 504 GO:0005829
GO:0008422
GO:0030245

Map