F097464

General Info

Members Datasets Scaffolds Average Seq Length
118 110 236 286

Family's Representative Sequence

Representative Sequence 3300015690|Ga0183363_1035|Ga0183363_103525
Length 312
Sequence MKGIILAGGTGTRLHPATLVVNKQLLPVYDKPMIYYPLSALMLAGIRDILIISSPDYLPHYRTLFGDGSALGLTIAYAEQPAPEGLPQAFTIGRDWIAGQAVTLVLGDNIFFGNGLRTLLRRAVARIEAEGGATLFSYRVDDPERYGVIAFDDDGRAVLIEEKPEHPRSNQAVTGLYMFDAGVCDHAAALVPSARGELEITDLARCYMDAGTLHVEAMGRGFAWLDTGTHDSLLEAAEFVRTIQHRQGIQIACLEEIAYLQGFIPREAAEARGQALTKTAYGRAILTAIAEAPVHEDERRTAERRQPFTQVP

Samples

Sample ID Description Type Environment
1 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
2 3300001432 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
7 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
8 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
9 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
14 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
15 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
16 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
17 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
18 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
19 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
20 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
21 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
22 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
23 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
26 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
27 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
28 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
29 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
30 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
31 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
32 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
33 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
34 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
35 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
36 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
37 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
38 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
39 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
40 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
41 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
42 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
43 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
44 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
45 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
46 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
47 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
48 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
49 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
50 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
51 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
52 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
53 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
54 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
55 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
56 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
57 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
58 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
59 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
60 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
61 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
62 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
63 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
64 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
65 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
66 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
67 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
68 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
69 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
70 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
71 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
72 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
73 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
74 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
75 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
76 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
77 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
78 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
79 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
80 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
81 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
87 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
88 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
89 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
90 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
91 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
92 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
93 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
94 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
95 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
96 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
97 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
98 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
99 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
100 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
101 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
102 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
103 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
104 2860867994 Pseudomonas sp. R1-43-08 Isolate Rhizosphere
105 2881633906 Lactiplantibacillus garii FI11369 Isolate Unclassified
106 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
107 2929189879 Pseudomonas sp. R-71842 Hybrid assembly Isolate Unclassified
108 2946027586 Pseudomonas sp. W4I3 Isolate Rhizosphere
109 2990196909 Pseudomonas mangrovi TC-11 Isolate Unclassified
110 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.53
Metatranscriptomes 0.85
Isolates 7.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.47
Nodule 1.69
Rhizoplane 1.69
Rhizosphere 73.73
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0183363_1035 3300015690 Bacteria 46444
2 JGI24034J14986_100585 3300001432 Bacteria 2152
3 JGI24739J22299_10005967 3300001989 Bacteria 4608
4 JGI24735J21928_10004550 3300002067 Bacteria 4659
5 rootL2_10001457 3300003322 Bacteria 117785
6 rootL2_10280545 3300003322 Bacteria 1971
7 Ga0007409J51694_1064574 3300003575 Bacteria 1426
8 Ga0055533_1003019 3300003756 Bacteria 3583
9 Ga0055532_1000191 3300003758 Bacteria 51347
10 Ga0055532_1000467 3300003758 Bacteria 18540
11 JGI25405J52794_10023739 3300003911 Bacteria 1249
12 Ga0065165_1002142 3300005262 Bacteria 17905
13 Ga0065712_10074858 3300005290 Bacteria 3992
14 Ga0070664_100075216 3300005564 Bacteria 2900
15 Ga0075370_10000995 3300006353 Bacteria 11706
16 Ga0099826_10000009 3300006948 Bacteria 336081
17 Ga0105251_10064081 3300009011 Bacteria 1723
18 Ga0105242_10000208 3300009176 Bacteria 45684
19 Ga0105238_10146107 3300009551 Bacteria 2341
20 Ga0157370_10588899 3300013104 Bacteria 1019
21 Ga0163162_10244850 3300013306 Bacteria 1924
22 Ga0157380_10546077 3300014326 Bacteria 1136
23 Ga0163161_10215243 3300017792 Bacteria 1486
24 Ga0209147_100378 3300025229 Bacteria 30960
25 Ga0207713_1050357 3300025735 Bacteria 1663
26 Ga0207649_10006885 3300025920 Bacteria 6177
27 Ga0209282_1000017 3300027666 Bacteria 191482
28 Ga0265327_10006606 3300031251 Bacteria 9219
29 Ga0307408_100082751 3300031548 Bacteria 2403
30 Ga0265314_10007209 3300031711 Bacteria 9675
31 Ga0373925_0082463 3300037068 Bacteria 2447
32 Ga0395899_0192354 3300037312 Bacteria 1427
33 Ga0395900_0625301 3300037418 Bacteria 1015
34 Ga0395905_0162594 3300037471 Bacteria 2098
35 Ga0436364_0683802 3300037853 Bacteria 2586
36 Ga0395901_0329237 3300038443 Bacteria 1579
37 Ga0436361_0547178 3300039447 Bacteria 17760
38 Ga0436363_0395010 3300039450 Bacteria 1050
39 Ga0439447_000384 3300041407 Bacteria 16142
40 Ga0439466_0000500 3300041411 Bacteria 14860
41 Ga0466972_0035165 3300044658 Bacteria 2452
42 Ga0453684_0002021 3300044712 Bacteria 51836
43 Ga0466971_0290776 3300044719 Bacteria 783
44 Ga0466960_0074120 3300044901 Bacteria 1700
45 Ga0466958_0340394 3300045836 Bacteria 965
46 Ga0495603_0068868 3300046455 Bacteria 2082
47 Ga0495650_0006037 3300046471 Bacteria 7656
48 Ga0495605_0001238 3300046474 Bacteria 17005
49 Ga0495584_0017917 3300046491 Bacteria 3602
50 Ga0495594_0027619 3300046499 Bacteria 3059
51 Ga0495596_0000070 3300046500 Bacteria 75962
52 Ga0495596_0019766 3300046500 Bacteria 2763
53 Ga0495607_0009015 3300046501 Bacteria 6782
54 Ga0495583_0011819 3300046506 Bacteria 4988
55 Ga0495606_0003991 3300046507 Bacteria 15084
56 Ga0495610_0000958 3300046512 Bacteria 26690
57 Ga0495616_0004025 3300046513 Bacteria 9341
58 Ga0495648_0003779 3300046524 Bacteria 13168
59 Ga0495654_0000267 3300046530 Bacteria 47487
60 Ga0495597_0058920 3300046542 Bacteria 1677
61 Ga0495625_0179756 3300046660 Bacteria 1408
62 Ga0495635_0102341 3300046663 Bacteria 1958
63 Ga0495661_0003409 3300046665 Bacteria 11750
64 Ga0495661_0116862 3300046665 Bacteria 1479
65 Ga0495669_0008846 3300046684 Bacteria 4243
66 Ga0495613_0000243 3300046689 Bacteria 51628
67 Ga0495671_0000276 3300046692 Bacteria 42984
68 Ga0495649_0030000 3300046694 Bacteria 3004
69 Ga0495649_0052672 3300046694 Bacteria 2205
70 Ga0495672_0001841 3300047320 Bacteria 20247
71 Ga0495683_0029031 3300047323 Bacteria 2827
72 Ga0495626_0000699 3300048091 Bacteria 31942
73 Ga0496109_0217954 3300048912 Bacteria 1795
74 Ga0496114_0616789 3300048917 Bacteria 956
75 Ga0496116_0123273 3300048919 Bacteria 1494
76 Ga0496117_0071025 3300048920 Bacteria 2335
77 Ga0496118_0009602 3300048921 Bacteria 9740
78 Ga0496121_0003121 3300048924 Bacteria 23927
79 Ga0496122_0000184 3300048925 Bacteria 144437
80 Ga0496122_0002935 3300048925 Bacteria 23260
81 Ga0496123_0000208 3300048926 Bacteria 119807
82 Ga0496125_0056262 3300048928 Bacteria 3196
83 Ga0495682_0136282 3300049460 Bacteria 877
84 Ga0501290_001430 3300049513 Bacteria 3270
85 Ga0501294_011316 3300049517 Bacteria 887
86 Ga0501296_003050 3300049519 Bacteria 1777
87 Ga0501036_0095161 3300049572 Bacteria 2518
88 Ga0501040_0125237 3300049576 Bacteria 1805
89 Ga0501041_0301444 3300049577 Bacteria 1010
90 Ga0501042_0388417 3300049578 Bacteria 1011
91 Ga0501048_0117072 3300049582 Bacteria 1882
92 Ga0501068_0399876 3300049584 Bacteria 886
93 Ga0501071_0184951 3300049587 Bacteria 1562
94 Ga0501072_0093316 3300049588 Bacteria 2391
95 Ga0501072_0133880 3300049588 Bacteria 1976
96 Ga0501074_0381560 3300049590 Bacteria 1000
97 Ga0501075_0150720 3300049591 Bacteria 1773
98 Ga0501076_0103716 3300049592 Bacteria 2294
99 Ga0501252_014565 3300049682 Bacteria 973
100 Ga0501234_004826 3300049707 Bacteria 2115
101 Ga0501079_0174760 3300049741 Bacteria 1675
102 Ga0501045_0139356 3300049824 Bacteria 1804
103 Ga0495601_0084386 3300053077 Bacteria 2040
104 Ga0500647_0081131 3300053091 Bacteria 1556
105 Ga0500641_0000838 3300053096 Bacteria 11089
106 Ga0500588_0000031 3300053146 Bacteria 29007
107 Ga0500627_0008924 3300053158 Bacteria 3586
108 Ga0530510_0064438 3300061734 Bacteria 2654
109 Ga0530510_0102660 3300061734 Bacteria 2091
110 2585228089 2582581299 Bacteria 6518058
111 2765571510 2765235838 Bacteria 5445269
112 2860868295 2860867994 Bacteria 5645326
113 2881636687 2881633906 Bacteria 2972201
114 2928029986 2928027323 Bacteria 4382488
115 2929190156 2929189879 Bacteria 5930554
116 2946028496 2946027586 Bacteria 6049274
117 2990197594 2990196909 Bacteria 4054280
118 8018849977 8018845410 Bacteria 8933938
119 Ga0183363_1035
120 JGI24034J14986_100585
121 JGI24739J22299_10005967
122 JGI24735J21928_10004550
123 rootL2_10001457
124 rootL2_10280545
125 Ga0007409J51694_1064574
126 Ga0055533_1003019
127 Ga0055532_1000191
128 Ga0055532_1000467
129 JGI25405J52794_10023739
130 Ga0065165_1002142
131 Ga0065712_10074858
132 Ga0070664_100075216
133 Ga0075370_10000995
134 Ga0099826_10000009
135 Ga0105251_10064081
136 Ga0105242_10000208
137 Ga0105238_10146107
138 Ga0157370_10588899
139 Ga0163162_10244850
140 Ga0157380_10546077
141 Ga0163161_10215243
142 Ga0209147_100378
143 Ga0207713_1050357
144 Ga0207649_10006885
145 Ga0209282_1000017
146 Ga0265327_10006606
147 Ga0307408_100082751
148 Ga0265314_10007209
149 Ga0373925_0082463
150 Ga0395899_0192354
151 Ga0395900_0625301
152 Ga0395905_0162594
153 Ga0436364_0683802
154 Ga0395901_0329237
155 Ga0436361_0547178
156 Ga0436363_0395010
157 Ga0439447_000384
158 Ga0439466_0000500
159 Ga0466972_0035165
160 Ga0453684_0002021
161 Ga0466971_0290776
162 Ga0466960_0074120
163 Ga0466958_0340394
164 Ga0495603_0068868
165 Ga0495650_0006037
166 Ga0495605_0001238
167 Ga0495584_0017917
168 Ga0495594_0027619
169 Ga0495596_0000070
170 Ga0495596_0019766
171 Ga0495607_0009015
172 Ga0495583_0011819
173 Ga0495606_0003991
174 Ga0495610_0000958
175 Ga0495616_0004025
176 Ga0495648_0003779
177 Ga0495654_0000267
178 Ga0495597_0058920
179 Ga0495625_0179756
180 Ga0495635_0102341
181 Ga0495661_0003409
182 Ga0495661_0116862
183 Ga0495669_0008846
184 Ga0495613_0000243
185 Ga0495671_0000276
186 Ga0495649_0030000
187 Ga0495649_0052672
188 Ga0495672_0001841
189 Ga0495683_0029031
190 Ga0495626_0000699
191 Ga0496109_0217954
192 Ga0496114_0616789
193 Ga0496116_0123273
194 Ga0496117_0071025
195 Ga0496118_0009602
196 Ga0496121_0003121
197 Ga0496122_0000184
198 Ga0496122_0002935
199 Ga0496123_0000208
200 Ga0496125_0056262
201 Ga0495682_0136282
202 Ga0501290_001430
203 Ga0501294_011316
204 Ga0501296_003050
205 Ga0501036_0095161
206 Ga0501040_0125237
207 Ga0501041_0301444
208 Ga0501042_0388417
209 Ga0501048_0117072
210 Ga0501068_0399876
211 Ga0501071_0184951
212 Ga0501072_0093316
213 Ga0501072_0133880
214 Ga0501074_0381560
215 Ga0501075_0150720
216 Ga0501076_0103716
217 Ga0501252_014565
218 Ga0501234_004826
219 Ga0501079_0174760
220 Ga0501045_0139356
221 Ga0495601_0084386
222 Ga0500647_0081131
223 Ga0500641_0000838
224 Ga0500588_0000031
225 Ga0500627_0008924
226 Ga0530510_0064438
227 Ga0530510_0102660
228 2585228089
229 2765571510
230 2860868295
231 2881636687
232 2928029986
233 2929190156
234 2946028496
235 2990197594
236 8018849977

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00483

NTP_transferase

Nucleotidyl transferase

2

243

0.98

PF12804

NTP_transf_3

MobA-like NTP transferase domain

3

307

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hoc-assembly2.cif.gz_B crystal structure of glucose 1-phosphate thymidylyltransferase from aneurinibacillus thermoaerophilus complexed with udp-n-acetylglucosamine 0.9884 1 286
4hoc-assembly1.cif.gz_A crystal structure of glucose 1-phosphate thymidylyltransferase from aneurinibacillus thermoaerophilus complexed with udp-n-acetylglucosamine 0.9882 1 288
4b42-assembly2.cif.gz_B-3 pseudomonas aeruginosa rmla in complex with allosteric inhibitor 0.9863 2 285
5ftv-assembly2.cif.gz_C pseudomonas aeruginosa rmla in complex with allosteric inhibitor 0.9862 2 288
4b4b-assembly1.cif.gz_B-2 pseudomonas aeruginosa rmla in complex with allosteric inhibitor 0.9858 2 288
ID Description Score Start End Superfamily
4b2xA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9854 2 288 3.90.550.10
4b2xA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9787 2 288 3.90.550.10
4ecmA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9521 1 238 3.90.550.10
4ecmA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9071 1 238 3.90.550.10
af_Q58501_1_209_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.874 1 225 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A357I8C9-F1-model_v4 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.9981 31 137 GO:0008879
GO:0045226
AF-A0A6I3TEG1-F1-model_v4 deleted 0.9969 14 126
AF-A0A336Q728-F1-model_v4 deleted 0.9954 26 287
AF-A0A2S7K859-F1-model_v4 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.9941 1 288 GO:0008879
GO:0045226
GO:0046872
AF-A0A3B9KKS4-F1-model_v4 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.9937 1 288 GO:0008879
GO:0045226
GO:0046872

Map