F101326

General Info

Members Datasets Scaffolds Average Seq Length
119 78 119 420

Family's Representative Sequence

Representative Sequence 3300006880|Ga0075429_100159236|Ga0075429_1001592362
Length 489
Sequence VHLVRLFHVSGVWGQSRKRALPAQSSARAPYLTRQLPPLDSPHAFDVSVFAVRIIVQRGPPPVVALMRKPSLLVIFLTVFIDLVGFGIVLPLLPVYSRNFGASDLVVGFIMASFSLMQFLFAPAWGRLSDRIGRRPVLLVSTFGAALSYAVFAYGSTLGGTAALTILLASRIVAGICGANITVAQAYIADITPPSERSKKMGLIGMAFGLGFICGPLLGGYASTRLGLWGPGCVAAVICAANFLLALAVLPESRRADSSPVAPRPRLSQWTHVLRRPTIGLLVTIFFLATFCFTCFEMTLGLLVIDNFHLDLVRDAGTVAVLFAFCGIVSAFVQGGPIGKLVKKMGEPRLIAVSLLLVAISMIPMPFIHGNGPLSWGVLGTKAGWPWWQLLFVLAILAIGSGLTRPPLFGMLSILTPEHEQGETIGVAQSAGSLARIAGPIFAGALFHLHPTWPYVVCGIIALITAIIAWQRLCRSESVLLAAKAQGSF

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
39 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
40 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
41 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
42 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
45 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
46 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
47 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
48 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
49 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
50 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
53 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
54 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
55 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
56 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
59 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
60 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
61 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
62 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
63 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
64 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
65 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
66 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
67 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
68 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
69 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
70 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
71 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
72 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
76 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
77 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
78 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10063449 3300005327 Bacteria 3012
2 Ga0070683_100206553 3300005329 Bacteria 1866
3 Ga0070690_100052295 3300005330 Bacteria 2611
4 Ga0070666_10061773 3300005335 Bacteria 2537
5 Ga0070689_100005428 3300005340 Bacteria 8701
6 Ga0070689_100009426 3300005340 Bacteria 6920
7 Ga0070689_100060406 3300005340 Bacteria 2947
8 Ga0070689_100076307 3300005340 Bacteria 2625
9 Ga0070714_100018261 3300005435 Bacteria 5694
10 Ga0070678_100214785 3300005456 Unclassified 1596
11 Ga0070681_10014244 3300005458 Bacteria 7914
12 Ga0068867_100211930 3300005459 Bacteria 1556
13 Ga0070685_10089419 3300005466 Bacteria 1861
14 Ga0070686_100005871 3300005544 Bacteria 6804
15 Ga0070704_100014754 3300005549 Bacteria 4887
16 Ga0068855_100062449 3300005563 Unclassified 4349
17 Ga0068857_100073616 3300005577 Bacteria 3044
18 Ga0068856_100000317 3300005614 Bacteria 52949
19 Ga0068856_100029872 3300005614 Bacteria 5326
20 Ga0068856_100154251 3300005614 Bacteria 2306
21 Ga0068859_100000015 3300005617 Bacteria 271458
22 Ga0068859_100054758 3300005617 Bacteria 4013
23 Ga0068864_100234587 3300005618 Bacteria 1698
24 Ga0068863_100054463 3300005841 Bacteria 3790
25 Ga0068863_100233853 3300005841 Bacteria 1773
26 Ga0068871_100040644 3300006358 Bacteria 3726
27 Ga0075428_100000173 3300006844 Bacteria 59939
28 Ga0075429_100159236 3300006880 Bacteria 1977
29 Ga0097620_100000015 3300006931 Bacteria 271458
30 Ga0097620_100054758 3300006931 Bacteria 4013
31 Ga0075435_100071102 3300007076 Bacteria 2841
32 Ga0105240_10077257 3300009093 Bacteria 4102
33 Ga0111539_10053946 3300009094 Bacteria 4785
34 Ga0111539_10089478 3300009094 Bacteria 3617
35 Ga0111539_10132831 3300009094 Unclassified 2915
36 Ga0105242_10027504 3300009176 Unclassified 4517
37 Ga0105242_10119637 3300009176 Bacteria 2258
38 Ga0105238_10014822 3300009551 Bacteria 7886
39 Ga0105249_10318582 3300009553 Bacteria 1565
40 Ga0157374_10034091 3300013296 Bacteria 4648
41 Ga0157375_10000006 3300013308 Bacteria 384086
42 Ga0207694_10009533 3300025924 Bacteria 7323
43 Ga0207664_10011130 3300025929 Bacteria 6376
44 Ga0207670_10018574 3300025936 Bacteria 4231
45 Ga0207670_10027468 3300025936 Bacteria 3598
46 Ga0207661_10178971 3300025944 Bacteria 1851
47 Ga0207702_10001031 3300026078 Bacteria 28566
48 Ga0207702_10023846 3300026078 Bacteria 5075
49 Ga0207676_10168077 3300026095 Bacteria 1908
50 Ga0207674_10087577 3300026116 Bacteria 3107
51 Ga0207674_10303695 3300026116 Bacteria 1545
52 Ga0265337_1001005 3300028556 Bacteria 14706
53 Ga0265326_10006835 3300028558 Bacteria 3520
54 Ga0265334_10008705 3300028573 Bacteria 4309
55 Ga0265318_10033316 3300028577 Unclassified 1990
56 Ga0265336_10004303 3300028666 Bacteria 5410
57 Ga0265338_10000041 3300028800 Bacteria 230676
58 Ga0265338_10002809 3300028800 Bacteria 25418
59 Ga0265338_10011330 3300028800 Bacteria 10316
60 Ga0265338_10031110 3300028800 Bacteria 5237
61 Ga0265338_10034137 3300028800 Bacteria 4922
62 Ga0265338_10125295 3300028800 Bacteria 2039
63 Ga0265338_10183026 3300028800 Bacteria 1595
64 Ga0265324_10009372 3300029957 Bacteria 3827
65 Ga0265324_10017012 3300029957 Bacteria 2647
66 Ga0265324_10027911 3300029957 Bacteria 1992
67 Ga0265320_10000939 3300031240 Bacteria 21724
68 Ga0265325_10051692 3300031241 Unclassified 2112
69 Ga0265340_10002142 3300031247 Bacteria 11320
70 Ga0265340_10062646 3300031247 Bacteria 1776
71 Ga0265339_10030908 3300031249 Bacteria 3029
72 Ga0265327_10003831 3300031251 Bacteria 13892
73 Ga0265316_10084937 3300031344 Bacteria 2423
74 Ga0265316_10111975 3300031344 Bacteria 2066
75 Ga0265314_10028734 3300031711 Unclassified 4142
76 Ga0265314_10034589 3300031711 Bacteria 3691
77 Ga0373933_0032958 3300035724 Bacteria 3011
78 Ga0373937_0023848 3300036401 Bacteria 5516
79 Ga0395905_0043268 3300037471 Bacteria 4225
80 Ga0451577_0000289 3300042876 Bacteria 97928
81 Ga0451577_0011811 3300042876 Bacteria 8239
82 Ga0451577_0012622 3300042876 Bacteria 7927
83 Ga0451577_0235828 3300042876 Bacteria 1655
84 Ga0453684_0002261 3300044712 Bacteria 47581
85 Ga0453684_0008573 3300044712 Bacteria 18245
86 Ga0453684_0096060 3300044712 Bacteria 3642
87 Ga0451576_0070440 3300045051 Unclassified 3640
88 Ga0451576_0074766 3300045051 Bacteria 3525
89 Ga0451576_0126666 3300045051 Bacteria 2661
90 Ga0451576_0277084 3300045051 Bacteria 1754
91 Ga0495592_0000087 3300046454 Bacteria 81851
92 Ga0495592_0105580 3300046454 Bacteria 2001
93 Ga0495629_0156928 3300046459 Unclassified 1581
94 Ga0495664_0079789 3300046477 Unclassified 1961
95 Ga0495618_0001404 3300046514 Bacteria 16217
96 Ga0495628_0000056 3300046516 Bacteria 89432
97 Ga0495630_0000365 3300046517 Bacteria 35847
98 Ga0495630_0008902 3300046517 Bacteria 7207
99 Ga0495666_0010194 3300046526 Bacteria 4687
100 Ga0495666_0041693 3300046526 Bacteria 2222
101 Ga0495652_0123983 3300046529 Bacteria 2056
102 Ga0495652_0125085 3300046529 Unclassified 2044
103 Ga0495640_0061124 3300046533 Unclassified 2560
104 Ga0495586_0000240 3300046535 Bacteria 36564
105 Ga0495586_0001264 3300046535 Bacteria 14169
106 Ga0495586_0003385 3300046535 Bacteria 8552
107 Ga0495645_0036588 3300046543 Bacteria 3578
108 Ga0495658_0002913 3300046683 Bacteria 8592
109 Ga0495658_0097381 3300046683 Bacteria 1751
110 Ga0495658_0113764 3300046683 Unclassified 1630
111 Ga0495674_0039398 3300047319 Unclassified 4236
112 Ga0495676_0033153 3300047321 Unclassified 4352
113 Ga0501032_0048714 3300049569 Bacteria 2861
114 Ga0501043_0218963 3300049579 Unclassified 1473
115 Ga0501035_0114742 3300049822 Bacteria 2358
116 Ga0501044_0025644 3300049823 Bacteria 6249
117 nmdc:mga09592_154630_c1 3300050508 Bacteria 1980
118 nmdc:mga0qj67_143027_c1 3300050509 Bacteria 1939
119 nmdc:mga08y16_118074_c1 3300050511 Bacteria 2760

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046529 Ga0495652_0125085 Ga0495652_0125085_934_2022 358
2 3300046683 Ga0495658_0097381 Ga0495658_0097381_44_1207 379
3 3300005549 Ga0070704_100014754 Ga0070704_1000147544 386
4 3300005617 Ga0068859_100000015 Ga0068859_100000015245 386
5 3300006931 Ga0097620_100000015 Ga0097620_100000015245 386
6 3300035724 Ga0373933_0032958 Ga0373933_0032958_425_1714 388
7 3300036401 Ga0373937_0023848 Ga0373937_0023848_1707_2996 388
8 3300031344 Ga0265316_10084937 Ga0265316_100849372 390
9 3300031344 Ga0265316_10111975 Ga0265316_101119752 390
10 3300031711 Ga0265314_10034589 Ga0265314_100345893 390
11 3300005614 Ga0068856_100000317 Ga0068856_10000031717 391
12 3300026078 Ga0207702_10001031 Ga0207702_1000103117 391
13 3300029957 Ga0265324_10027911 Ga0265324_100279112 391
14 3300037471 Ga0395905_0043268 Ga0395905_0043268_539_1723 393
15 3300049569 Ga0501032_0048714 Ga0501032_0048714_248_1498 396
16 3300049579 Ga0501043_0218963 Ga0501043_0218963_27_1277 396
17 3300049822 Ga0501035_0114742 Ga0501035_0114742_826_2076 396
18 3300049823 Ga0501044_0025644 Ga0501044_0025644_2237_3487 396
19 3300031241 Ga0265325_10051692 Ga0265325_100516922 402
20 3300005340 Ga0070689_100005428 Ga0070689_1000054283 403
21 3300005577 Ga0068857_100073616 Ga0068857_1000736163 403
22 3300026116 Ga0207674_10087577 Ga0207674_100875771 403
23 3300028800 Ga0265338_10002809 Ga0265338_1000280926 404
24 3300029957 Ga0265324_10017012 Ga0265324_100170122 404
25 3300028556 Ga0265337_1001005 Ga0265337_10010054 407
26 3300031240 Ga0265320_10000939 Ga0265320_100009395 407
27 3300046454 Ga0495592_0105580 Ga0495592_0105580_699_1931 407
28 3300005618 Ga0068864_100234587 Ga0068864_1002345872 408
29 3300009176 Ga0105242_10119637 Ga0105242_101196372 408
30 3300009553 Ga0105249_10318582 Ga0105249_103185822 408
31 3300026095 Ga0207676_10168077 Ga0207676_101680772 408
32 3300026116 Ga0207674_10303695 Ga0207674_103036952 408
33 3300044712 Ga0453684_0002261 Ga0453684_0002261_5860_7089 408
34 3300046454 Ga0495592_0000087 Ga0495592_0000087_56434_57672 408
35 3300046477 Ga0495664_0079789 Ga0495664_0079789_661_1899 408
36 3300046514 Ga0495618_0001404 Ga0495618_0001404_14213_15451 408
37 3300046516 Ga0495628_0000056 Ga0495628_0000056_29349_30587 408
38 3300046517 Ga0495630_0008902 Ga0495630_0008902_5180_6418 408
39 3300046533 Ga0495640_0061124 Ga0495640_0061124_147_1385 408
40 3300046535 Ga0495586_0001264 Ga0495586_0001264_11699_12937 408
41 3300047319 Ga0495674_0039398 Ga0495674_0039398_2458_3696 408
42 3300005614 Ga0068856_100029872 Ga0068856_1000298726 409
43 3300026078 Ga0207702_10023846 Ga0207702_100238466 409
44 3300031251 Ga0265327_10003831 Ga0265327_1000383114 409
45 3300031711 Ga0265314_10028734 Ga0265314_100287342 409
46 3300046529 Ga0495652_0123983 Ga0495652_0123983_725_1960 409
47 3300029957 Ga0265324_10009372 Ga0265324_100093722 410
48 3300031247 Ga0265340_10062646 Ga0265340_100626461 410
49 3300045051 Ga0451576_0277084 Ga0451576_0277084_443_1699 411
50 3300005459 Ga0068867_100211930 Ga0068867_1002119301 413
51 3300006358 Ga0068871_100040644 Ga0068871_1000406442 413
52 3300007076 Ga0075435_100071102 Ga0075435_1000711023 413
53 3300009176 Ga0105242_10027504 Ga0105242_100275043 413
54 3300045051 Ga0451576_0070440 Ga0451576_0070440_700_1983 413
55 3300045051 Ga0451576_0074766 Ga0451576_0074766_1754_3022 413
56 3300046526 Ga0495666_0041693 Ga0495666_0041693_71_1366 413
57 3300046535 Ga0495586_0003385 Ga0495586_0003385_5267_6562 413
58 3300046543 Ga0495645_0036588 Ga0495645_0036588_1590_2858 413
59 3300042876 Ga0451577_0011811 Ga0451577_0011811_5803_7116 414
60 3300042876 Ga0451577_0235828 Ga0451577_0235828_47_1294 415
61 3300005340 Ga0070689_100060406 Ga0070689_1000604062 417
62 3300044712 Ga0453684_0096060 Ga0453684_0096060_2209_3468 417
63 3300046459 Ga0495629_0156928 Ga0495629_0156928_72_1358 417
64 3300046517 Ga0495630_0000365 Ga0495630_0000365_24991_26277 417
65 3300046526 Ga0495666_0010194 Ga0495666_0010194_320_1606 417
66 3300046535 Ga0495586_0000240 Ga0495586_0000240_10264_11550 417
67 3300046683 Ga0495658_0113764 Ga0495658_0113764_289_1575 417
68 3300047321 Ga0495676_0033153 Ga0495676_0033153_918_2204 417
69 3300028800 Ga0265338_10034137 Ga0265338_100341373 418
70 3300031247 Ga0265340_10002142 Ga0265340_100021423 418
71 3300042876 Ga0451577_0012622 Ga0451577_0012622_2458_3744 420
72 3300005456 Ga0070678_100214785 Ga0070678_1002147851 421
73 3300005335 Ga0070666_10061773 Ga0070666_100617733 422
74 3300005544 Ga0070686_100005871 Ga0070686_1000058715 422
75 3300005841 Ga0068863_100233853 Ga0068863_1002338532 422
76 3300009094 Ga0111539_10132831 Ga0111539_101328312 422
77 3300013308 Ga0157375_10000006 Ga0157375_10000006300 422
78 3300028800 Ga0265338_10011330 Ga0265338_100113303 422
79 3300046683 Ga0495658_0002913 Ga0495658_0002913_5748_7082 422
80 3300050508 nmdc:mga09592_154630_c1 nmdc:mga09592_154630_c1_668_1939 422
81 3300006880 Ga0075429_100159236 Ga0075429_1001592362 423
82 3300005330 Ga0070690_100052295 Ga0070690_1000522952 424
83 3300006844 Ga0075428_100000173 Ga0075428_10000017315 424
84 3300045051 Ga0451576_0126666 Ga0451576_0126666_65_1378 424
85 3300050509 nmdc:mga0qj67_143027_c1 nmdc:mga0qj67_143027_c1_105_1385 424
86 3300005340 Ga0070689_100076307 Ga0070689_1000763072 425
87 3300005563 Ga0068855_100062449 Ga0068855_1000624492 425
88 3300005614 Ga0068856_100154251 Ga0068856_1001542512 425
89 3300005841 Ga0068863_100054463 Ga0068863_1000544631 425
90 3300009093 Ga0105240_10077257 Ga0105240_100772572 425
91 3300009094 Ga0111539_10053946 Ga0111539_100539463 425
92 3300009094 Ga0111539_10089478 Ga0111539_100894783 425
93 3300009551 Ga0105238_10014822 Ga0105238_100148223 425
94 3300013296 Ga0157374_10034091 Ga0157374_100340912 425
95 3300025924 Ga0207694_10009533 Ga0207694_100095334 425
96 3300025936 Ga0207670_10027468 Ga0207670_100274682 425
97 3300028558 Ga0265326_10006835 Ga0265326_100068352 425
98 3300028800 Ga0265338_10031110 Ga0265338_100311102 425
99 3300028800 Ga0265338_10125295 Ga0265338_101252951 425
100 3300031249 Ga0265339_10030908 Ga0265339_100309083 425
101 3300050511 nmdc:mga08y16_118074_c1 nmdc:mga08y16_118074_c1_89_1462 425
102 3300005340 Ga0070689_100009426 Ga0070689_1000094262 426
103 3300005466 Ga0070685_10089419 Ga0070685_100894191 426
104 3300005617 Ga0068859_100054758 Ga0068859_1000547586 426
105 3300006931 Ga0097620_100054758 Ga0097620_1000547586 426
106 3300025936 Ga0207670_10018574 Ga0207670_100185744 426
107 3300042876 Ga0451577_0000289 Ga0451577_0000289_58971_60293 426
108 3300044712 Ga0453684_0008573 Ga0453684_0008573_8995_10281 426
109 3300005458 Ga0070681_10014244 Ga0070681_100142442 428
110 3300028573 Ga0265334_10008705 Ga0265334_100087052 428
111 3300028577 Ga0265318_10033316 Ga0265318_100333161 428
112 3300028666 Ga0265336_10004303 Ga0265336_100043032 428
113 3300028800 Ga0265338_10000041 Ga0265338_1000004155 428
114 3300028800 Ga0265338_10183026 Ga0265338_101830261 428
115 3300005327 Ga0070658_10063449 Ga0070658_100634492 429
116 3300005329 Ga0070683_100206553 Ga0070683_1002065532 429
117 3300005435 Ga0070714_100018261 Ga0070714_1000182611 429
118 3300025929 Ga0207664_10011130 Ga0207664_100111305 429
119 3300025944 Ga0207661_10178971 Ga0207661_101789712 429

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12832

MFS_1_like

MFS_1 like family

44

229

0.9

PF07690

MFS_1

Major Facilitator Superfamily

75

385

0.89

PF07690

MFS_1

Major Facilitator Superfamily

374

486

0.89

PF00083

Sugar_tr

Sugar (and other) transporter

62

163

0.86

PF03825

Nuc_H_symport

Nucleoside H+ symporter

61

250

0.86

PF13347

MFS_2

MFS/sugar transport protein

82

413

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.8863 7 410
7lo7-assembly1.cif.gz_Z nora in complex with fab25 0.8655 1 412
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.858 7 410
7lo8-assembly1.cif.gz_Z nora in complex with fab36 0.8531 1 412
7lo7-assembly1.cif.gz_Z nora in complex with fab25 0.8431 1 412
ID Description Score Start End Superfamily
af_A0A0R0F726_79_268_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8968 7 189 1.20.1250.20
af_Q2G1N0_6_195_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.895 7 189 1.20.1250.20
af_A4I8Z5_294_489_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8906 7 185 1.20.1250.20
af_Q18797_15_402_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8895 7 412 1.20.1250.20
af_Q8BH31_42_222_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8893 10 174 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A6N6PV68-F1-model_v4 TCR/Tet family MFS transporter 0.9771 3 414 GO:0005886
GO:0022857
AF-A0A6N6PV68-F1-model_v4 TCR/Tet family MFS transporter 0.9609 3 414 GO:0005886
GO:0022857
AF-A0A1Q7YRC8-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9562 182 414 GO:0005886
GO:0022857
AF-A0A7Y4QI77-F1-model_v4 MFS transporter 0.9495 1 322 GO:0005886
GO:0022857
AF-A0A2V7GNX8-F1-model_v4 Tetracycline resistance MFS efflux pump 0.9465 7 376 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
82.49 0.82 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map