F105258

General Info

Members Datasets Scaffolds Average Seq Length
120 94 120 609

Family's Representative Sequence

Representative Sequence 3300005841|Ga0068863_100000039|Ga0068863_10000003940
Length 671
Sequence MPTEQALTIQRKRSPSAGRGEGASHAFRGRLDQTAALIAPIVLIVGLALAGGGFDVSARHVAGLGAWLVVVALLVLGATSSTTLGRPLYWTGGLLASLALLSALSSLWSGSIELSVIEADRVLVYLSFFLAAFLIAQTSERRQRFAEGLAIAVALVAILGLASRLLPHVLEVSNALGTGPRLRYPLGYWNANGAICGIAVAMLLWMSRHAEWRALRWLSVAAMPAILLTLYFTYSRGGLLALVIAVVCLLALSRDRLWLLGTTSVAVIGVVPAILAVQDRRDLAENLASQAAVDQGVTVLLILLAGTVITLLGFAGLRRIEAREGRLTEKALQVSRSPALLRSIALAAVLAAVGLGIVAGGHAWRQFSSPDLYFPSNPEQHFGQLSGAGRYDFWRVAIDAFGEKPVLGHGAGTYLFSWQQLRSIELPVHDAHSLYLEAFAELGVVGGLLVLALVISLLWCAFSAWRAAPHPERERHAALFAAMLAFAIGAAFDWFWEIAGLGAVFFLAGGVMVSVRCAQLASGPNSRTVRAEGRRYGLALAGLGVAWIAAIALVGPLLVDHEIKDSQAKAAAGDLATAVDRAETARSIEPWAASPHVQLGLLAQVQGDYPTAISNFTQAIEREEDNWQWYYLRSKAEHEAGDAAAANRDLERAREMNPEATCLREEWDSCG

Samples

Sample ID Description Type Environment
1 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
17 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
18 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
19 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
20 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
21 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
22 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
37 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
38 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
39 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
40 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
41 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
42 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
43 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
44 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
45 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
46 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
47 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
48 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
49 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
50 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
51 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
52 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
53 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
54 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
55 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
56 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
57 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
58 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
59 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
60 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
61 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
62 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
63 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
64 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
65 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
66 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
67 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
68 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
69 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
70 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
71 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
72 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
73 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
74 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
75 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
76 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
77 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
78 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
79 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
80 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
81 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
82 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
83 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
84 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
85 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
86 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
89 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
90 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
91 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
92 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
93 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
94 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 14.17
Rhizosphere 85
Stem 0
Stem Tuber 0
Unclassified 0.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24748J21848_1000198 3300002074 Bacteria 7669
2 Ga0070683_100015921 3300005329 Bacteria 6615
3 Ga0070691_10000053 3300005341 Bacteria 32151
4 Ga0070691_10001377 3300005341 Bacteria 10377
5 Ga0070674_100000075 3300005356 Bacteria 45822
6 Ga0070714_100024163 3300005435 Bacteria 4999
7 Ga0070711_100028812 3300005439 Bacteria 3657
8 Ga0070662_100000015 3300005457 Bacteria 109379
9 Ga0068867_100000293 3300005459 Bacteria 32772
10 Ga0070665_100000128 3300005548 Bacteria 142568
11 Ga0070664_100054998 3300005564 Bacteria 3378
12 Ga0068856_100011985 3300005614 Bacteria 8397
13 Ga0068864_100000035 3300005618 Bacteria 195218
14 Ga0068866_10000220 3300005718 Bacteria 27117
15 Ga0068863_100000039 3300005841 Bacteria 161450
16 Ga0068858_100000350 3300005842 Bacteria 48492
17 Ga0068858_100000354 3300005842 Bacteria 48397
18 Ga0075433_10000307 3300006852 Bacteria 29603
19 Ga0075433_10028993 3300006852 Bacteria 4711
20 Ga0105247_10000110 3300009101 Bacteria 83499
21 Ga0105242_10000010 3300009176 Bacteria 151649
22 Ga0105242_10000904 3300009176 Bacteria 23037
23 Ga0157375_10000095 3300013308 Bacteria 88952
24 Ga0157379_10013351 3300014968 Bacteria 7192
25 Ga0157379_10053311 3300014968 Bacteria 3613
26 Ga0163161_10000140 3300017792 Bacteria 66684
27 Ga0207642_10003274 3300025899 Bacteria 5093
28 Ga0207642_10025439 3300025899 Bacteria 2395
29 Ga0207710_10000138 3300025900 Bacteria 83652
30 Ga0207664_10001798 3300025929 Bacteria 14136
31 Ga0207706_10000062 3300025933 Bacteria 109344
32 Ga0207686_10000227 3300025934 Bacteria 42647
33 Ga0207686_10001002 3300025934 Bacteria 16774
34 Ga0207669_10000091 3300025937 Bacteria 45833
35 Ga0207661_10000136 3300025944 Bacteria 46409
36 Ga0207679_10014705 3300025945 Bacteria 5152
37 Ga0207703_10000028 3300026035 Bacteria 208682
38 Ga0207703_10000185 3300026035 Bacteria 72988
39 Ga0207702_10006428 3300026078 Bacteria 10139
40 Ga0207641_10000072 3300026088 Bacteria 151067
41 Ga0207648_10000782 3300026089 Bacteria 35850
42 Ga0207676_10000026 3300026095 Bacteria 248593
43 Ga0268266_10000023 3300028379 Bacteria 501899
44 Ga0265337_1000041 3300028556 Bacteria 56264
45 Ga0265326_10000015 3300028558 Bacteria 159279
46 Ga0265322_10000003 3300028654 Bacteria 468671
47 Ga0265336_10004846 3300028666 Bacteria 5042
48 Ga0265332_10010286 3300031238 Bacteria 4165
49 Ga0265328_10005974 3300031239 Bacteria 5183
50 Ga0265320_10000001 3300031240 Bacteria 847191
51 Ga0265329_10002961 3300031242 Bacteria 7552
52 Ga0265331_10000931 3300031250 Bacteria 23417
53 Ga0265327_10000003 3300031251 Bacteria 852750
54 Ga0265316_10061407 3300031344 Bacteria 2919
55 Ga0265314_10000356 3300031711 Bacteria 63799
56 Ga0495592_0001864 3300046454 Bacteria 14838
57 Ga0495603_0000022 3300046455 Bacteria 64108
58 Ga0495629_0000028 3300046459 Bacteria 127409
59 Ga0495641_0028019 3300046461 Bacteria 2731
60 Ga0495582_0000048 3300046473 Bacteria 60887
61 Ga0495618_0000003 3300046514 Bacteria 256269
62 Ga0495620_0000060 3300046515 Bacteria 95642
63 Ga0495628_0001728 3300046516 Bacteria 19872
64 Ga0495628_0004613 3300046516 Bacteria 12181
65 Ga0495628_0006273 3300046516 Bacteria 10385
66 Ga0495630_0001515 3300046517 Bacteria 16079
67 Ga0495630_0001516 3300046517 Bacteria 16077
68 Ga0495644_0002156 3300046523 Bacteria 7898
69 Ga0495652_0005025 3300046529 Bacteria 12529
70 Ga0495640_0002588 3300046533 Bacteria 14533
71 Ga0495587_0025680 3300046536 Bacteria 3599
72 Ga0495587_0044488 3300046536 Unclassified 2641
73 Ga0495645_0019970 3300046543 Bacteria 4830
74 Ga0495667_0000057 3300046559 Bacteria 100656
75 Ga0495656_0001181 3300046615 Bacteria 8495
76 Ga0495634_0000974 3300046642 Bacteria 26986
77 Ga0495634_0008709 3300046642 Bacteria 7527
78 Ga0495635_0000006 3300046663 Bacteria 301820
79 Ga0495657_0003667 3300046675 Bacteria 12460
80 Ga0495647_0000466 3300046681 Bacteria 11711
81 Ga0495658_0000031 3300046683 Bacteria 71165
82 Ga0495613_0000003 3300046689 Bacteria 248826
83 Ga0495613_0027386 3300046689 Bacteria 4242
84 Ga0495624_0000002 3300046690 Bacteria 189957
85 Ga0495624_0004969 3300046690 Bacteria 9635
86 Ga0495670_0005600 3300046691 Bacteria 6164
87 Ga0495600_0005510 3300046809 Bacteria 7639
88 Ga0495604_0001970 3300047317 Bacteria 16586
89 Ga0495674_0000007 3300047319 Bacteria 336257
90 Ga0495676_0000263 3300047321 Bacteria 42431
91 Ga0495680_0000324 3300047322 Bacteria 53748
92 Ga0495680_0001393 3300047322 Bacteria 26081
93 Ga0495680_0053202 3300047322 Bacteria 3152
94 Ga0495680_0072613 3300047322 Bacteria 2617
95 Ga0495602_0002467 3300048088 Bacteria 18845
96 Ga0495602_0057772 3300048088 Bacteria 3401
97 Ga0496101_0000012 3300048904 Bacteria 268127
98 Ga0496102_0000533 3300048905 Bacteria 41239
99 Ga0496103_0000001 3300048906 Bacteria 643471
100 Ga0496104_0000002 3300048907 Bacteria 686017
101 Ga0496104_0000243 3300048907 Bacteria 48237
102 Ga0496105_0000001 3300048908 Bacteria 1328178
103 Ga0496105_0002097 3300048908 Bacteria 14426
104 Ga0496106_0000020 3300048909 Bacteria 169168
105 Ga0496107_0000014 3300048910 Bacteria 176738
106 Ga0496108_0000497 3300048911 Bacteria 31285
107 Ga0496108_0007459 3300048911 Bacteria 8866
108 Ga0496109_0000058 3300048912 Bacteria 118556
109 Ga0496109_0091630 3300048912 Bacteria 2811
110 Ga0496112_0000002 3300048915 Bacteria 782039
111 Ga0496114_0000080 3300048917 Bacteria 68701
112 Ga0496115_0000104 3300048918 Bacteria 79824
113 Ga0496115_0010727 3300048918 Bacteria 6851
114 Ga0496119_0011764 3300048922 Bacteria 7195
115 nmdc:mga0a205_1_c2 3300050515 Bacteria 266330
116 nmdc:mga0a205_22163_c1 3300050515 Bacteria 6012
117 Ga0495601_0008386 3300053077 Bacteria 6103
118 Ga0495595_0000084 3300053084 Bacteria 45392
119 Ga0495619_0000041 3300053085 Bacteria 112824
120 Ga0495619_0001976 3300053085 Bacteria 13670

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048911 Ga0496108_0007459 Ga0496108_0007459_7422_8855 461
2 3300046529 Ga0495652_0005025 Ga0495652_0005025_10973_12469 476
3 3300048912 Ga0496109_0091630 Ga0496109_0091630_1281_2792 487
4 3300046690 Ga0495624_0004969 Ga0495624_0004969_6125_8029 492
5 3300046454 Ga0495592_0001864 Ga0495592_0001864_5307_7214 500
6 3300005341 Ga0070691_10001377 Ga0070691_100013772 502
7 3300005439 Ga0070711_100028812 Ga0070711_1000288123 507
8 3300046461 Ga0495641_0028019 Ga0495641_0028019_15_1892 509
9 3300005329 Ga0070683_100015921 Ga0070683_1000159212 511
10 3300025944 Ga0207661_10000136 Ga0207661_100001364 511
11 3300046642 Ga0495634_0008709 Ga0495634_0008709_4578_6581 515
12 3300005341 Ga0070691_10000053 Ga0070691_1000005329 519
13 3300046689 Ga0495613_0027386 Ga0495613_0027386_118_1800 520
14 3300048915 Ga0496112_0000002 Ga0496112_0000002_402695_404605 520
15 3300046689 Ga0495613_0000003 Ga0495613_0000003_233787_235691 523
16 3300005459 Ga0068867_100000293 Ga0068867_10000029324 524
17 3300026089 Ga0207648_10000782 Ga0207648_1000078223 524
18 3300046642 Ga0495634_0000974 Ga0495634_0000974_14284_16164 525
19 3300046543 Ga0495645_0019970 Ga0495645_0019970_1491_3386 528
20 3300048088 Ga0495602_0057772 Ga0495602_0057772_69_1964 528
21 3300005356 Ga0070674_100000075 Ga0070674_10000007553 530
22 3300005718 Ga0068866_10000220 Ga0068866_1000022020 530
23 3300025899 Ga0207642_10003274 Ga0207642_100032743 530
24 3300025937 Ga0207669_10000091 Ga0207669_100000913 530
25 3300046523 Ga0495644_0002156 Ga0495644_0002156_2603_4507 530
26 3300005435 Ga0070714_100024163 Ga0070714_1000241634 532
27 3300025929 Ga0207664_10001798 Ga0207664_100017989 532
28 3300046516 Ga0495628_0004613 Ga0495628_0004613_2134_4041 532
29 3300046533 Ga0495640_0002588 Ga0495640_0002588_4172_6073 532
30 3300053084 Ga0495595_0000084 Ga0495595_0000084_43538_45265 532
31 3300005457 Ga0070662_100000015 Ga0070662_10000001525 534
32 3300025933 Ga0207706_10000062 Ga0207706_1000006283 534
33 3300046455 Ga0495603_0000022 Ga0495603_0000022_1878_3698 534
34 3300048911 Ga0496108_0000497 Ga0496108_0000497_16479_18476 534
35 3300048912 Ga0496109_0000058 Ga0496109_0000058_16472_18469 534
36 3300053085 Ga0495619_0000041 Ga0495619_0000041_77370_79400 534
37 3300014968 Ga0157379_10013351 Ga0157379_100133513 535
38 3300053085 Ga0495619_0001976 Ga0495619_0001976_7381_9270 535
39 3300046514 Ga0495618_0000003 Ga0495618_0000003_209227_211131 536
40 3300046663 Ga0495635_0000006 Ga0495635_0000006_235405_237330 536
41 3300046809 Ga0495600_0005510 Ga0495600_0005510_5278_7182 536
42 3300048907 Ga0496104_0000243 Ga0496104_0000243_6529_8403 536
43 3300048908 Ga0496105_0002097 Ga0496105_0002097_6529_8403 536
44 3300053077 Ga0495601_0008386 Ga0495601_0008386_1503_3320 536
45 3300013308 Ga0157375_10000095 Ga0157375_1000009512 537
46 3300046459 Ga0495629_0000028 Ga0495629_0000028_99301_101193 537
47 3300006852 Ga0075433_10000307 Ga0075433_1000030726 538
48 3300028556 Ga0265337_1000041 Ga0265337_100004141 538
49 3300028558 Ga0265326_10000015 Ga0265326_10000015113 538
50 3300028654 Ga0265322_10000003 Ga0265322_1000000365 538
51 3300028666 Ga0265336_10004846 Ga0265336_100048463 538
52 3300031238 Ga0265332_10010286 Ga0265332_100102863 538
53 3300031239 Ga0265328_10005974 Ga0265328_100059742 538
54 3300031240 Ga0265320_10000001 Ga0265320_1000000165 538
55 3300031242 Ga0265329_10002961 Ga0265329_100029613 538
56 3300031250 Ga0265331_10000931 Ga0265331_100009316 538
57 3300031251 Ga0265327_10000003 Ga0265327_1000000365 538
58 3300031344 Ga0265316_10061407 Ga0265316_100614072 538
59 3300031711 Ga0265314_10000356 Ga0265314_100003563 538
60 3300046615 Ga0495656_0001181 Ga0495656_0001181_58_1947 538
61 3300050515 nmdc:mga0a205_1_c2 nmdc:mga0a205_1_c2_32843_34732 538
62 3300005564 Ga0070664_100054998 Ga0070664_1000549982 539
63 3300009101 Ga0105247_10000110 Ga0105247_1000011046 539
64 3300025900 Ga0207710_10000138 Ga0207710_1000013874 539
65 3300025945 Ga0207679_10014705 Ga0207679_100147051 539
66 3300046473 Ga0495582_0000048 Ga0495582_0000048_45474_47276 539
67 3300046516 Ga0495628_0001728 Ga0495628_0001728_3078_4973 539
68 3300046517 Ga0495630_0001515 Ga0495630_0001515_8756_10645 539
69 3300046536 Ga0495587_0044488 Ga0495587_0044488_379_2274 539
70 3300046683 Ga0495658_0000031 Ga0495658_0000031_45437_47239 539
71 3300048088 Ga0495602_0002467 Ga0495602_0002467_3309_5204 539
72 3300048918 Ga0496115_0010727 Ga0496115_0010727_4114_6012 539
73 3300046690 Ga0495624_0000002 Ga0495624_0000002_182795_184696 540
74 3300048904 Ga0496101_0000012 Ga0496101_0000012_103021_104928 540
75 3300048909 Ga0496106_0000020 Ga0496106_0000020_2522_4429 540
76 3300048910 Ga0496107_0000014 Ga0496107_0000014_2511_4418 540
77 3300048917 Ga0496114_0000080 Ga0496114_0000080_24219_26117 541
78 3300048918 Ga0496115_0000104 Ga0496115_0000104_66442_68340 541
79 3300005614 Ga0068856_100011985 Ga0068856_1000119854 542
80 3300005618 Ga0068864_100000035 Ga0068864_10000003520 542
81 3300026078 Ga0207702_10006428 Ga0207702_100064284 542
82 3300026095 Ga0207676_10000026 Ga0207676_10000026160 542
83 3300046536 Ga0495587_0025680 Ga0495587_0025680_1472_3355 542
84 3300048907 Ga0496104_0000002 Ga0496104_0000002_289545_291446 542
85 3300048908 Ga0496105_0000001 Ga0496105_0000001_1036733_1038634 542
86 3300048922 Ga0496119_0011764 Ga0496119_0011764_3030_4931 542
87 3300046516 Ga0495628_0006273 Ga0495628_0006273_4836_6743 544
88 3300005548 Ga0070665_100000128 Ga0070665_10000012817 545
89 3300005842 Ga0068858_100000350 Ga0068858_10000035045 545
90 3300005842 Ga0068858_100000354 Ga0068858_1000003543 545
91 3300026035 Ga0207703_10000028 Ga0207703_1000002869 545
92 3300026035 Ga0207703_10000185 Ga0207703_1000018545 545
93 3300028379 Ga0268266_10000023 Ga0268266_1000002397 545
94 3300046515 Ga0495620_0000060 Ga0495620_0000060_11719_13731 545
95 3300009176 Ga0105242_10000010 Ga0105242_1000001072 547
96 3300025934 Ga0207686_10000227 Ga0207686_100002276 547
97 3300047322 Ga0495680_0053202 Ga0495680_0053202_171_2057 547
98 3300047317 Ga0495604_0001970 Ga0495604_0001970_2519_4414 548
99 3300048905 Ga0496102_0000533 Ga0496102_0000533_2461_4362 548
100 3300048906 Ga0496103_0000001 Ga0496103_0000001_344161_346062 548
101 3300046675 Ga0495657_0003667 Ga0495657_0003667_4919_6823 549
102 3300046691 Ga0495670_0005600 Ga0495670_0005600_2836_4740 549
103 3300047321 Ga0495676_0000263 Ga0495676_0000263_2361_4274 549
104 3300006852 Ga0075433_10028993 Ga0075433_100289934 550
105 3300009176 Ga0105242_10000904 Ga0105242_100009044 550
106 3300017792 Ga0163161_10000140 Ga0163161_100001403 550
107 3300025899 Ga0207642_10025439 Ga0207642_100254392 550
108 3300025934 Ga0207686_10001002 Ga0207686_100010024 550
109 3300047319 Ga0495674_0000007 Ga0495674_0000007_227992_229833 550
110 3300050515 nmdc:mga0a205_22163_c1 nmdc:mga0a205_22163_c1_912_2762 550
111 3300014968 Ga0157379_10053311 Ga0157379_100533112 551
112 3300046559 Ga0495667_0000057 Ga0495667_0000057_27020_28924 551
113 3300046681 Ga0495647_0000466 Ga0495647_0000466_3575_5485 551
114 3300047322 Ga0495680_0000324 Ga0495680_0000324_49435_51339 551
115 3300047322 Ga0495680_0001393 Ga0495680_0001393_19302_21215 551
116 3300047322 Ga0495680_0072613 Ga0495680_0072613_453_2357 551
117 3300002074 JGI24748J21848_1000198 JGI24748J21848_10001985 552
118 3300005841 Ga0068863_100000039 Ga0068863_10000003940 552
119 3300026088 Ga0207641_10000072 Ga0207641_1000007246 552
120 3300046517 Ga0495630_0001516 Ga0495630_0001516_2391_4205 552

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04932

Wzy_C

O-Antigen ligase

295

451

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
7obi-assembly2.cif.gz_B consensus tetratricopeptide repeat protein type rv4 0.9696 440 540
2avp-assembly1.cif.gz_A crystal structure of an 8 repeat consensus tpr superhelix 0.9612 478 541
5fzr-assembly1.cif.gz_B designed tpr protein m4n delta c (cf i) 0.9597 441 538
3kd7-assembly2.cif.gz_B designed tpr module (ctpr390) in complex with its peptide-ligand (hsp90 peptide) 0.9512 441 539
8fe6-assembly4.cif.gz_G crystal structure of human o-glcnac transferase (ogt) in complex with an exosite-binding peptide and udp-glcnac 0.9511 438 540
ID Description Score Start End Superfamily
af_A0A0R4IV14_22_108_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9879 475 546 1.25.40.10
af_Q67YJ9_465_551_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9795 461 539 1.25.40.10
3pe4C01 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9778 461 541 1.25.40.10
4gyyC01 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.977 461 541 1.25.40.10
af_G3UYY4_1393_1473_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9763 461 539 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A6B1CTW6-F1-model_v4 Tetratricopeptide repeat protein 0.9595 443 546
AF-A0A521TPZ9-F1-model_v4 Protein-glutamate O-methyltransferase CheR 0.9438 444 538 GO:0008757
GO:0032259
AF-A0A2V7TQ35-F1-model_v4 Uncharacterized protein 0.9398 441 546
AF-D6PDL4-F1-model_v4 Uncharacterized protein 0.9393 441 546
AF-A0A5S9IS05-F1-model_v4 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 0.938 437 546

Feature Viewer

pLDDT pTM Quality
60.12 0.51 Medium
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Predicted Structure (AlphaFold2)

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