F106853

General Info

Members Datasets Scaffolds Average Seq Length
120 67 119 289

Family's Representative Sequence

Representative Sequence 3300037471|Ga0395905_0399504|Ga0395905_0399504_236_1114
Length 292
Sequence MTTEIKANETPTLIALLHGPDQPGLVARVSGWIFARGGNILHADQHRDREAGIFFQRVEWVPVGASGVAEREAKDFEVFASSLGMKARILTSLDRPRVAVFVSKADHCFHDLMLRWKAGEFACEMVAVVGNHNDLESAARGYGVPFHHIAVGAATKDAAEARQVGLLHELRTELVVLARYMQVLTADFLEKFGAPVINIHHSFLPAFAGGKPYHQAHARGVKLIGATAHYATRVLDDGPIIHQDVARVTHRHGVDELVRKGRDLEKFVLAQAVRWHLEGRVLVYGNKTVVFD

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
6 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
7 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
8 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
9 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
10 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
11 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
12 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
13 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
14 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
15 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
16 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
20 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
21 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
22 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
23 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
24 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
25 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
26 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
27 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
28 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
29 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
30 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
31 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
32 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
33 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
34 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
35 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
36 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
37 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
38 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
39 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
40 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
41 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
42 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
43 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
44 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
45 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
46 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
47 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
48 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
49 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
50 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
51 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
52 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
53 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
54 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
56 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
62 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
63 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
64 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
66 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
67 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.17
Metatranscriptomes 0
Isolates 0.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.67
Nodule 0
Rhizoplane 0
Rhizosphere 94.17
Stem 0
Stem Tuber 0
Unclassified 4.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10119266 3300003323 Bacteria 3920
2 Ga0070658_10103543 3300005327 Bacteria 2354
3 Ga0068869_100000122 3300005334 Bacteria 37440
4 Ga0070679_100017049 3300005530 Bacteria 7021
5 Ga0068856_100020001 3300005614 Bacteria 6499
6 Ga0097621_100231832 3300006237 Bacteria 1612
7 Ga0068871_100006336 3300006358 Bacteria 8362
8 Ga0068865_100046889 3300006881 Bacteria 2967
9 Ga0105243_10347369 3300009148 Bacteria 1361
10 Ga0207652_10019444 3300025921 Bacteria 5587
11 Ga0207709_10239909 3300025935 Bacteria 1318
12 Ga0207704_10005295 3300025938 Bacteria 5944
13 Ga0207689_10000476 3300025942 Bacteria 37736
14 Ga0207677_10147903 3300026023 Bacteria 1808
15 Ga0207702_10001251 3300026078 Bacteria 25641
16 Ga0207702_10070959 3300026078 Bacteria 2997
17 Ga0207648_10024502 3300026089 Bacteria 5385
18 Ga0207674_10115832 3300026116 Bacteria 2652
19 Ga0265319_1000076 3300028563 Bacteria 75994
20 Ga0265319_1003559 3300028563 Bacteria 8078
21 Ga0265319_1008255 3300028563 Bacteria 4583
22 Ga0265319_1008350 3300028563 Bacteria 4550
23 Ga0265319_1010730 3300028563 Bacteria 3809
24 Ga0265318_10000016 3300028577 Bacteria 184782
25 Ga0265318_10000665 3300028577 Bacteria 23439
26 Ga0265318_10024256 3300028577 Bacteria 2408
27 Ga0265318_10055699 3300028577 Bacteria 1479
28 Ga0265323_10000050 3300028653 Bacteria 64908
29 Ga0265323_10002802 3300028653 Bacteria 7850
30 Ga0265323_10011420 3300028653 Bacteria 3584
31 Ga0265323_10028014 3300028653 Bacteria 2114
32 Ga0265323_10030728 3300028653 Bacteria 1999
33 Ga0265322_10002758 3300028654 Bacteria 5371
34 Ga0265336_10003432 3300028666 Bacteria 6210
35 Ga0307515_10176581 3300028794 Bacteria 2104
36 Ga0265324_10051763 3300029957 Bacteria 1410
37 Ga0265330_10007969 3300031235 Bacteria 5133
38 Ga0265330_10041700 3300031235 Bacteria 2034
39 Ga0265330_10138988 3300031235 Bacteria 1033
40 Ga0265320_10000048 3300031240 Bacteria 118683
41 Ga0265320_10003603 3300031240 Bacteria 10352
42 Ga0265320_10004477 3300031240 Bacteria 9156
43 Ga0265320_10006335 3300031240 Bacteria 7468
44 Ga0265320_10014364 3300031240 Bacteria 4511
45 Ga0265320_10017875 3300031240 Bacteria 3920
46 Ga0265320_10037281 3300031240 Bacteria 2449
47 Ga0265320_10056438 3300031240 Bacteria 1887
48 Ga0265339_10108865 3300031249 Bacteria 1435
49 Ga0265331_10007117 3300031250 Bacteria 6513
50 Ga0265331_10011147 3300031250 Bacteria 4930
51 Ga0265327_10000417 3300031251 Bacteria 77684
52 Ga0265327_10001165 3300031251 Bacteria 35716
53 Ga0265327_10046116 3300031251 Bacteria 2310
54 Ga0265316_10008366 3300031344 Bacteria 9607
55 Ga0265316_10016905 3300031344 Bacteria 6315
56 Ga0265316_10130033 3300031344 Bacteria 1897
57 Ga0265316_10312786 3300031344 Bacteria 1142
58 Ga0307408_100000003 3300031548 Bacteria 618438
59 Ga0265313_10001043 3300031595 Bacteria 26985
60 Ga0265313_10022576 3300031595 Bacteria 3410
61 Ga0307508_10000112 3300031616 Bacteria 95874
62 Ga0265314_10000596 3300031711 Bacteria 45506
63 Ga0265314_10001384 3300031711 Bacteria 27217
64 Ga0265314_10007948 3300031711 Bacteria 9149
65 Ga0265314_10118641 3300031711 Bacteria 1669
66 Ga0265342_10079110 3300031712 Bacteria 1901
67 Ga0265342_10148482 3300031712 Bacteria 1303
68 Ga0307410_10000037 3300031852 Bacteria 48189
69 Ga0307412_10035734 3300031911 Bacteria 3177
70 Ga0307409_100000026 3300031995 Bacteria 50903
71 Ga0307416_100000027 3300032002 Bacteria 172418
72 Ga0395905_0000030 3300037471 Bacteria 289430
73 Ga0395905_0121227 3300037471 Bacteria 2458
74 Ga0395905_0399504 3300037471 Bacteria 1269
75 Ga0451853_0066461 3300041512 Unclassified 1115
76 Ga0439441_002000 3300042001 Bacteria 2803
77 Ga0439443_004530 3300042003 Bacteria 1816
78 Ga0451577_0000304 3300042876 Bacteria 95601
79 Ga0451577_0039349 3300042876 Bacteria 4249
80 Ga0451577_0059658 3300042876 Bacteria 3402
81 Ga0451577_0112786 3300042876 Bacteria 2433
82 Ga0451577_0368950 3300042876 Bacteria 1302
83 Ga0453683_0000265 3300044673 Bacteria 68647
84 Ga0466961_0220373 3300044693 Bacteria 1169
85 Ga0453684_0000001 3300044712 Bacteria 2623166
86 Ga0453684_0008342 3300044712 Bacteria 18627
87 Ga0453684_0054187 3300044712 Bacteria 5227
88 Ga0453684_0213790 3300044712 Bacteria 2239
89 Ga0453684_0331585 3300044712 Bacteria 1720
90 Ga0466957_0029769 3300044842 Bacteria 3258
91 Ga0466959_0071357 3300045049 Bacteria 2515
92 Ga0451576_0003553 3300045051 Bacteria 21229
93 Ga0451576_0004856 3300045051 Bacteria 17223
94 Ga0451576_0016941 3300045051 Bacteria 8026
95 Ga0451576_0063778 3300045051 Bacteria 3840
96 Ga0451576_0410079 3300045051 Bacteria 1421
97 Ga0466967_0015653 3300045976 Bacteria 5953
98 Ga0501033_0001364 3300049570 Bacteria 21776
99 Ga0501034_0060761 3300049571 Bacteria 3796
100 Ga0501036_0012207 3300049572 Bacteria 7118
101 Ga0501037_0028351 3300049573 Bacteria 4135
102 Ga0501038_0106966 3300049574 Bacteria 2321
103 Ga0501043_0055204 3300049579 Bacteria 3121
104 Ga0501046_0000550 3300049580 Bacteria 37312
105 Ga0501046_0020612 3300049580 Bacteria 5450
106 Ga0501046_0146714 3300049580 Bacteria 1781
107 Ga0501047_0005114 3300049581 Bacteria 12306
108 Ga0501047_0034133 3300049581 Bacteria 4912
109 Ga0501047_0038934 3300049581 Bacteria 4599
110 Ga0501047_0047792 3300049581 Bacteria 4133
111 Ga0501070_0640662 3300049586 Bacteria 844
112 Ga0501243_000027 3300049675 Bacteria 12866
113 Ga0501080_0049461 3300049742 Bacteria 3913
114 Ga0501035_0000309 3300049822 Bacteria 56854
115 Ga0501035_0045617 3300049822 Bacteria 3943
116 Ga0501035_0246671 3300049822 Bacteria 1518
117 Ga0501044_0000049 3300049823 Bacteria 145043
118 Ga0500568_0016020 3300053139 Bacteria 3341
119 Ga0500622_0004691 3300053156 Bacteria 8455

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049586 Ga0501070_0640662 Ga0501070_0640662_15_818 265
2 3300037471 Ga0395905_0121227 Ga0395905_0121227_1637_2443 266
3 3300044712 Ga0453684_0331585 Ga0453684_0331585_883_1683 266
4 3300031251 Ga0265327_10046116 Ga0265327_100461163 282
5 3300031616 Ga0307508_10000112 Ga0307508_100001128 282
6 iso_pu_bacteria 2786546940 2788435489 282
7 3300006237 Ga0097621_100231832 Ga0097621_1002318322 283
8 3300026023 Ga0207677_10147903 Ga0207677_101479032 283
9 3300028563 Ga0265319_1003559 Ga0265319_10035595 283
10 3300028653 Ga0265323_10002802 Ga0265323_100028027 283
11 3300031240 Ga0265320_10014364 Ga0265320_100143643 283
12 3300028563 Ga0265319_1000076 Ga0265319_100007632 284
13 3300028563 Ga0265319_1008255 Ga0265319_10082552 284
14 3300028563 Ga0265319_1008350 Ga0265319_10083502 284
15 3300028563 Ga0265319_1010730 Ga0265319_10107306 284
16 3300028577 Ga0265318_10000016 Ga0265318_10000016104 284
17 3300028577 Ga0265318_10000665 Ga0265318_1000066518 284
18 3300028577 Ga0265318_10024256 Ga0265318_100242562 284
19 3300028653 Ga0265323_10028014 Ga0265323_100280142 284
20 3300028666 Ga0265336_10003432 Ga0265336_100034322 284
21 3300028794 Ga0307515_10176581 Ga0307515_101765812 284
22 3300029957 Ga0265324_10051763 Ga0265324_100517631 284
23 3300031235 Ga0265330_10138988 Ga0265330_101389881 284
24 3300031240 Ga0265320_10003603 Ga0265320_100036033 284
25 3300031240 Ga0265320_10004477 Ga0265320_1000447710 284
26 3300031240 Ga0265320_10006335 Ga0265320_100063353 284
27 3300031240 Ga0265320_10017875 Ga0265320_100178752 284
28 3300031250 Ga0265331_10007117 Ga0265331_100071174 284
29 3300031250 Ga0265331_10011147 Ga0265331_100111475 284
30 3300031251 Ga0265327_10000417 Ga0265327_1000041763 284
31 3300031344 Ga0265316_10008366 Ga0265316_100083668 284
32 3300031344 Ga0265316_10130033 Ga0265316_101300333 284
33 3300031548 Ga0307408_100000003 Ga0307408_100000003420 284
34 3300031595 Ga0265313_10001043 Ga0265313_1000104315 284
35 3300031711 Ga0265314_10000596 Ga0265314_100005968 284
36 3300031711 Ga0265314_10001384 Ga0265314_1000138423 284
37 3300031711 Ga0265314_10007948 Ga0265314_100079483 284
38 3300031712 Ga0265342_10148482 Ga0265342_101484822 284
39 3300031852 Ga0307410_10000037 Ga0307410_1000003741 284
40 3300031911 Ga0307412_10035734 Ga0307412_100357342 284
41 3300031995 Ga0307409_100000026 Ga0307409_1000000266 284
42 3300032002 Ga0307416_100000027 Ga0307416_10000002743 284
43 3300037471 Ga0395905_0000030 Ga0395905_0000030_126695_127549 284
44 3300042001 Ga0439441_002000 Ga0439441_002000_359_1237 284
45 3300042876 Ga0451577_0039349 Ga0451577_0039349_2502_3356 284
46 3300042876 Ga0451577_0112786 Ga0451577_0112786_1455_2309 284
47 3300044712 Ga0453684_0000001 Ga0453684_0000001_139979_140854 284
48 3300044712 Ga0453684_0008342 Ga0453684_0008342_2311_3171 284
49 3300045051 Ga0451576_0003553 Ga0451576_0003553_16993_17847 284
50 3300045051 Ga0451576_0016941 Ga0451576_0016941_3690_4544 284
51 3300045051 Ga0451576_0063778 Ga0451576_0063778_565_1419 284
52 3300049570 Ga0501033_0001364 Ga0501033_0001364_5639_6517 284
53 3300049571 Ga0501034_0060761 Ga0501034_0060761_2372_3226 284
54 3300049573 Ga0501037_0028351 Ga0501037_0028351_1895_2773 284
55 3300049574 Ga0501038_0106966 Ga0501038_0106966_349_1227 284
56 3300049579 Ga0501043_0055204 Ga0501043_0055204_162_1037 284
57 3300049580 Ga0501046_0000550 Ga0501046_0000550_31376_32254 284
58 3300049580 Ga0501046_0020612 Ga0501046_0020612_4232_5086 284
59 3300049581 Ga0501047_0005114 Ga0501047_0005114_6795_7649 284
60 3300049581 Ga0501047_0034133 Ga0501047_0034133_3623_4501 284
61 3300049581 Ga0501047_0038934 Ga0501047_0038934_1945_2820 284
62 3300049742 Ga0501080_0049461 Ga0501080_0049461_1925_2803 284
63 3300049822 Ga0501035_0045617 Ga0501035_0045617_1517_2371 284
64 3300049822 Ga0501035_0246671 Ga0501035_0246671_129_1007 284
65 3300053139 Ga0500568_0016020 Ga0500568_0016020_1668_2522 284
66 3300053156 Ga0500622_0004691 Ga0500622_0004691_2807_3661 284
67 3300003323 rootH1_10119266 rootH1_101192662 285
68 3300005327 Ga0070658_10103543 Ga0070658_101035432 285
69 3300005334 Ga0068869_100000122 Ga0068869_1000001227 285
70 3300005530 Ga0070679_100017049 Ga0070679_1000170492 285
71 3300005614 Ga0068856_100020001 Ga0068856_1000200015 285
72 3300006358 Ga0068871_100006336 Ga0068871_1000063362 285
73 3300006881 Ga0068865_100046889 Ga0068865_1000468893 285
74 3300009148 Ga0105243_10347369 Ga0105243_103473692 285
75 3300025921 Ga0207652_10019444 Ga0207652_100194442 285
76 3300025935 Ga0207709_10239909 Ga0207709_102399092 285
77 3300025938 Ga0207704_10005295 Ga0207704_100052952 285
78 3300025942 Ga0207689_10000476 Ga0207689_1000047632 285
79 3300026078 Ga0207702_10001251 Ga0207702_100012513 285
80 3300026078 Ga0207702_10070959 Ga0207702_100709592 285
81 3300026089 Ga0207648_10024502 Ga0207648_100245026 285
82 3300026116 Ga0207674_10115832 Ga0207674_101158322 285
83 3300028577 Ga0265318_10055699 Ga0265318_100556992 285
84 3300028653 Ga0265323_10000050 Ga0265323_1000005058 285
85 3300028653 Ga0265323_10011420 Ga0265323_100114204 285
86 3300028653 Ga0265323_10030728 Ga0265323_100307283 285
87 3300028654 Ga0265322_10002758 Ga0265322_100027581 285
88 3300031235 Ga0265330_10007969 Ga0265330_100079692 285
89 3300031235 Ga0265330_10041700 Ga0265330_100417004 285
90 3300031240 Ga0265320_10000048 Ga0265320_1000004824 285
91 3300031240 Ga0265320_10037281 Ga0265320_100372813 285
92 3300031240 Ga0265320_10056438 Ga0265320_100564382 285
93 3300031249 Ga0265339_10108865 Ga0265339_101088651 285
94 3300031251 Ga0265327_10001165 Ga0265327_100011655 285
95 3300031344 Ga0265316_10016905 Ga0265316_100169058 285
96 3300031344 Ga0265316_10312786 Ga0265316_103127861 285
97 3300031595 Ga0265313_10022576 Ga0265313_100225763 285
98 3300031711 Ga0265314_10118641 Ga0265314_101186413 285
99 3300031712 Ga0265342_10079110 Ga0265342_100791101 285
100 3300037471 Ga0395905_0399504 Ga0395905_0399504_236_1114 285
101 3300041512 Ga0451853_0066461 Ga0451853_0066461_55_1026 285
102 3300042003 Ga0439443_004530 Ga0439443_004530_707_1573 285
103 3300042876 Ga0451577_0000304 Ga0451577_0000304_47606_48511 285
104 3300042876 Ga0451577_0059658 Ga0451577_0059658_1128_1985 285
105 3300042876 Ga0451577_0368950 Ga0451577_0368950_179_1039 285
106 3300044673 Ga0453683_0000265 Ga0453683_0000265_62878_63735 285
107 3300044693 Ga0466961_0220373 Ga0466961_0220373_239_1102 285
108 3300044712 Ga0453684_0054187 Ga0453684_0054187_2692_3552 285
109 3300044712 Ga0453684_0213790 Ga0453684_0213790_385_1242 285
110 3300044842 Ga0466957_0029769 Ga0466957_0029769_134_991 285
111 3300045049 Ga0466959_0071357 Ga0466959_0071357_1182_2045 285
112 3300045051 Ga0451576_0004856 Ga0451576_0004856_7249_8106 285
113 3300045051 Ga0451576_0410079 Ga0451576_0410079_508_1371 285
114 3300045976 Ga0466967_0015653 Ga0466967_0015653_2534_3391 285
115 3300049572 Ga0501036_0012207 Ga0501036_0012207_6051_6911 285
116 3300049580 Ga0501046_0146714 Ga0501046_0146714_372_1232 285
117 3300049581 Ga0501047_0047792 Ga0501047_0047792_2724_3584 285
118 3300049675 Ga0501243_000027 Ga0501243_000027_9968_10864 285
119 3300049822 Ga0501035_0000309 Ga0501035_0000309_16508_17368 285
120 3300049823 Ga0501044_0000049 Ga0501044_0000049_1434_2294 285

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00551

Formyl_trans_N

Formyl transferase

96

273

0.96

PF01842

ACT

ACT domain

13

77

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3w7b-assembly1.cif.gz_A crystal structure of formyltetrahydrofolate deformylase from thermus thermophilus hb8 0.9562 6 285
3lou-assembly1.cif.gz_A crystal structure of formyltetrahydrofolate deformylase (yp_105254.1) from burkholderia mallei atcc 23344 at 1.90 a resolution 0.941 7 285
3o1l-assembly1.cif.gz_A crystal structure of a formyltetrahydrofolate deformylase (pspto_4314) from pseudomonas syringae pv. tomato str. dc3000 at 2.20 a resolution 0.9369 2 285
3n0v-assembly1.cif.gz_D crystal structure of a formyltetrahydrofolate deformylase (pp_0327) from pseudomonas putida kt2440 at 2.25 a resolution 0.9359 7 284
3lou-assembly1.cif.gz_B crystal structure of formyltetrahydrofolate deformylase (yp_105254.1) from burkholderia mallei atcc 23344 at 1.90 a resolution 0.9353 7 285
ID Description Score Start End Superfamily
af_Q9FHP1_225_360_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9171 9 57 3.30.460.10
af_K7KZB4_251_370_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9132 7 59 3.30.70.260
af_I1JQN9_795_861_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.8964 11 55 3.30.70.260
af_O80644_110_174_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.8961 9 58 3.30.70.260
af_P04161_1_214_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.8918 89 272 3.40.50.170
ID Description Score Start End GO Terms
AF-A0A533ZIJ0-F1-model_v4 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.9782 95 285 GO:0006189
GO:0006730
GO:0008864
AF-A0A7Y4SEU0-F1-model_v4 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.9739 117 285 GO:0006189
GO:0006730
GO:0008864
AF-A0A533ZIJ0-F1-model_v4 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.9682 95 285 GO:0006189
GO:0006730
GO:0008864
AF-A0A2S8N1M3-F1-model_v4 deleted 0.9638 87 166
AF-A0A4Q3UU89-F1-model_v4 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.9624 99 285 GO:0006189
GO:0006730
GO:0008864

Feature Viewer

pLDDT pTM Quality
90.96 0.89 High
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Predicted Structure (AlphaFold2)

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