F128253

General Info

Members Datasets Scaffolds Average Seq Length
125 70 124 396

Family's Representative Sequence

Representative Sequence 3300049744|Ga0501083_0001317|Ga0501083_0001317_13641_14987
Length 448
Sequence MTENITIRNMKRGKGEKAEAPPDDACRRELASPKTGSGKNFRFAARAGAANGAFAVARTLPTIVHLDADAFFVSCELVLRPELRGKKCAVGGRERGIISSASYEARACGVYTPMPTRRALAVCPDLIMLPHTSGLYGRVSREMFDLCETLTPLVQRNSIDEGYLDLAPCGFTSAATVESVVRGLQQKIQDRLQIPASFGLASNKLVAQIASKLRKPLGFVIVPPGTEAEFLAPLPIGKLPGVGPKTEQALQRRGIALVRDVLAKSESELRAIFGEGWRDMVATATGIDDRPVETDHDDAKSYSQQETFGADIGDFSEVERIAKRMVDELLPKIREDGKRVRTMTVKVRYPDFSQESHARSLATAVDLEALFYPLVAPLLRAAWRKRRPLRLVSVRFSSVEDGGRQLELFGEAEEKRRRLAGVLDRLNDRGRHAIVQHGHQLAKKSGHS

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
12 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
13 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
14 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
15 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
16 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
17 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
24 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
25 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
26 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
27 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
28 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
29 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
30 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
31 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
32 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
33 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
34 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
35 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
36 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
37 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
38 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
39 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
40 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
41 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
42 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
43 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
44 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
45 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
46 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
47 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
48 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
49 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
50 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
51 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
52 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
53 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
54 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
56 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
65 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
66 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
67 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
68 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
70 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.2
Metatranscriptomes 0
Isolates 0.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.8
Nodule 0
Rhizoplane 0
Rhizosphere 94.4
Stem 0
Stem Tuber 0
Unclassified 4.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10035712 3300003320 Bacteria 16227
2 rootH2_10042311 3300003320 Bacteria 8367
3 rootL2_10046719 3300003322 Bacteria 5591
4 rootH1_10101701 3300003323 Bacteria 4221
5 Ga0070683_100117242 3300005329 Bacteria 2514
6 Ga0068868_100146640 3300005338 Bacteria 1941
7 Ga0070713_100014372 3300005436 Bacteria 5877
8 Ga0068867_100042388 3300005459 Bacteria 3329
9 Ga0068857_100029039 3300005577 Bacteria 4880
10 Ga0068856_100012349 3300005614 Bacteria 8271
11 Ga0068866_10072468 3300005718 Unclassified 1825
12 Ga0097621_100063004 3300006237 Bacteria 3046
13 Ga0068871_100064742 3300006358 Bacteria 2993
14 Ga0068865_100076568 3300006881 Bacteria 2388
15 Ga0157369_10236321 3300013105 Bacteria 1909
16 Ga0163163_10076848 3300014325 Bacteria 3335
17 Ga0207700_10014008 3300025928 Bacteria 5242
18 Ga0207689_10000195 3300025942 Bacteria 53117
19 Ga0207661_10011115 3300025944 Bacteria 6509
20 Ga0207677_10045788 3300026023 Bacteria 2924
21 Ga0207702_10001050 3300026078 Bacteria 28302
22 Ga0207648_10004178 3300026089 Bacteria 14924
23 Ga0265337_1034385 3300028556 Bacteria 1491
24 Ga0265319_1000374 3300028563 Bacteria 32370
25 Ga0265319_1001795 3300028563 Bacteria 12285
26 Ga0265319_1003254 3300028563 Bacteria 8546
27 Ga0265319_1015756 3300028563 Bacteria 2918
28 Ga0265318_10000005 3300028577 Bacteria 303630
29 Ga0265318_10003123 3300028577 Bacteria 8476
30 Ga0265318_10003686 3300028577 Bacteria 7653
31 Ga0265318_10022990 3300028577 Bacteria 2488
32 Ga0265318_10027379 3300028577 Unclassified 2241
33 Ga0265323_10000161 3300028653 Bacteria 40039
34 Ga0265323_10013813 3300028653 Bacteria 3212
35 Ga0265323_10015827 3300028653 Bacteria 2960
36 Ga0265323_10026675 3300028653 Bacteria 2176
37 Ga0265323_10033003 3300028653 Bacteria 1919
38 Ga0265323_10048278 3300028653 Unclassified 1520
39 Ga0265322_10002588 3300028654 Bacteria 5560
40 Ga0265322_10010177 3300028654 Bacteria 2726
41 Ga0265336_10022411 3300028666 Bacteria 2011
42 Ga0265338_10001187 3300028800 Bacteria 42989
43 Ga0265338_10002481 3300028800 Bacteria 27564
44 Ga0265324_10003114 3300029957 Bacteria 8086
45 Ga0265324_10030799 3300029957 Bacteria 1881
46 Ga0265330_10007147 3300031235 Bacteria 5470
47 Ga0265330_10048906 3300031235 Unclassified 1859
48 Ga0265320_10001565 3300031240 Bacteria 16452
49 Ga0265320_10002577 3300031240 Bacteria 12595
50 Ga0265320_10014350 3300031240 Bacteria 4515
51 Ga0265320_10021993 3300031240 Bacteria 3420
52 Ga0265320_10042583 3300031240 Bacteria 2251
53 Ga0265325_10028219 3300031241 Bacteria 3027
54 Ga0265340_10010704 3300031247 Bacteria 4901
55 Ga0265331_10006392 3300031250 Bacteria 6974
56 Ga0265327_10000016 3300031251 Bacteria 467439
57 Ga0265327_10014728 3300031251 Bacteria 5095
58 Ga0265327_10021539 3300031251 Bacteria 3886
59 Ga0265327_10023338 3300031251 Bacteria 3665
60 Ga0265327_10061578 3300031251 Bacteria 1913
61 Ga0265316_10004246 3300031344 Bacteria 14318
62 Ga0265316_10106694 3300031344 Bacteria 2124
63 Ga0307408_100001027 3300031548 Bacteria 21465
64 Ga0265313_10001993 3300031595 Bacteria 18411
65 Ga0265313_10002851 3300031595 Bacteria 14500
66 Ga0265313_10006937 3300031595 Bacteria 7867
67 Ga0265313_10029503 3300031595 Bacteria 2836
68 Ga0265313_10056580 3300031595 Bacteria 1854
69 Ga0265313_10070658 3300031595 Unclassified 1608
70 Ga0307508_10000160 3300031616 Bacteria 80743
71 Ga0265314_10004835 3300031711 Bacteria 12320
72 Ga0265314_10004905 3300031711 Bacteria 12227
73 Ga0265314_10012874 3300031711 Bacteria 6796
74 Ga0265314_10033384 3300031711 Bacteria 3775
75 Ga0265314_10041445 3300031711 Bacteria 3295
76 Ga0265342_10065199 3300031712 Unclassified 2135
77 Ga0307410_10000005 3300031852 Bacteria 100475
78 Ga0307407_10005847 3300031903 Bacteria 5389
79 Ga0307407_10012864 3300031903 Bacteria 4041
80 Ga0307409_100000038 3300031995 Bacteria 45577
81 Ga0373933_0157980 3300035724 Bacteria 1439
82 Ga0395905_0000010 3300037471 Bacteria 460729
83 Ga0395905_0244437 3300037471 Bacteria 1677
84 Ga0451577_0000012 3300042876 Bacteria 575467
85 Ga0453683_0012658 3300044673 Bacteria 5527
86 Ga0453684_0000001 3300044712 Bacteria 2623166
87 Ga0453684_0085085 3300044712 Bacteria 3930
88 Ga0451576_0000206 3300045051 Bacteria 147691
89 Ga0451576_0026865 3300045051 Bacteria 6185
90 Ga0451576_0052201 3300045051 Bacteria 4285
91 Ga0451576_0089499 3300045051 Bacteria 3201
92 Ga0451576_0137784 3300045051 Bacteria 2545
93 Ga0451576_0267024 3300045051 Bacteria 1789
94 Ga0495611_0043736 3300046648 Bacteria 2003
95 Ga0501033_0002253 3300049570 Bacteria 16524
96 Ga0501033_0011049 3300049570 Bacteria 6911
97 Ga0501034_0251275 3300049571 Unclassified 1712
98 Ga0501036_0038301 3300049572 Bacteria 4057
99 Ga0501037_0013085 3300049573 Bacteria 6118
100 Ga0501037_0120283 3300049573 Unclassified 1888
101 Ga0501038_0092801 3300049574 Bacteria 2527
102 Ga0501039_0292073 3300049575 Bacteria 1281
103 Ga0501042_0009135 3300049578 Bacteria 6591
104 Ga0501043_0025288 3300049579 Bacteria 4657
105 Ga0501046_0000504 3300049580 Bacteria 39044
106 Ga0501046_0022886 3300049580 Bacteria 5146
107 Ga0501046_0111126 3300049580 Unclassified 2093
108 Ga0501047_0011883 3300049581 Bacteria 8238
109 Ga0501047_0200004 3300049581 Bacteria 1859
110 Ga0501048_0001530 3300049582 Bacteria 17531
111 Ga0501068_0074482 3300049584 Unclassified 2075
112 Ga0501073_0191851 3300049589 Bacteria 1414
113 Ga0501243_000005 3300049675 Bacteria 25698
114 Ga0501083_0001317 3300049744 Bacteria 16824
115 Ga0501083_0036376 3300049744 Bacteria 3358
116 Ga0501083_0080144 3300049744 Bacteria 2165
117 Ga0501035_0001155 3300049822 Bacteria 27552
118 Ga0501035_0003769 3300049822 Bacteria 14445
119 Ga0501035_0006208 3300049822 Bacteria 11243
120 Ga0501035_0059817 3300049822 Bacteria 3393
121 Ga0501044_0001175 3300049823 Bacteria 31002
122 Ga0501044_0001684 3300049823 Bacteria 25975
123 Ga0501044_0001947 3300049823 Bacteria 23893
124 Ga0500568_0022194 3300053139 Bacteria 2721

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300028556 Ga0265337_1034385 Ga0265337_10343851 364
2 3300035724 Ga0373933_0157980 Ga0373933_0157980_326_1429 366
3 3300028563 Ga0265319_1015756 Ga0265319_10157563 385
4 3300031240 Ga0265320_10014350 Ga0265320_100143502 385
5 3300037471 Ga0395905_0000010 Ga0395905_0000010_440882_442045 385
6 3300028577 Ga0265318_10000005 Ga0265318_1000000512 386
7 3300029957 Ga0265324_10030799 Ga0265324_100307992 386
8 3300031251 Ga0265327_10014728 Ga0265327_100147285 386
9 3300031595 Ga0265313_10002851 Ga0265313_1000285110 386
10 3300031595 Ga0265313_10006937 Ga0265313_100069374 386
11 3300031711 Ga0265314_10004835 Ga0265314_100048359 386
12 3300049675 Ga0501243_000005 Ga0501243_000005_9254_10414 386
13 3300049744 Ga0501083_0080144 Ga0501083_0080144_797_1960 386
14 3300014325 Ga0163163_10076848 Ga0163163_100768482 388
15 3300031903 Ga0307407_10005847 Ga0307407_100058473 388
16 3300045051 Ga0451576_0026865 Ga0451576_0026865_2232_3404 388
17 3300049822 Ga0501035_0001155 Ga0501035_0001155_9032_10201 388
18 3300049823 Ga0501044_0001175 Ga0501044_0001175_17527_18696 388
19 3300003320 rootH2_10042311 rootH2_100423117 389
20 3300003322 rootL2_10046719 rootL2_100467193 389
21 3300028653 Ga0265323_10000161 Ga0265323_1000016122 389
22 3300028653 Ga0265323_10048278 Ga0265323_100482781 389
23 3300028654 Ga0265322_10002588 Ga0265322_100025882 389
24 3300031251 Ga0265327_10000016 Ga0265327_1000001655 389
25 3300031595 Ga0265313_10056580 Ga0265313_100565801 389
26 3300031595 Ga0265313_10070658 Ga0265313_100706582 389
27 3300031712 Ga0265342_10065199 Ga0265342_100651992 389
28 3300042876 Ga0451577_0000012 Ga0451577_0000012_163534_164709 389
29 3300044712 Ga0453684_0085085 Ga0453684_0085085_1044_2222 389
30 3300045051 Ga0451576_0267024 Ga0451576_0267024_153_1325 389
31 3300005459 Ga0068867_100042388 Ga0068867_1000423883 390
32 3300005718 Ga0068866_10072468 Ga0068866_100724682 390
33 3300006237 Ga0097621_100063004 Ga0097621_1000630043 390
34 3300006358 Ga0068871_100064742 Ga0068871_1000647422 390
35 3300006881 Ga0068865_100076568 Ga0068865_1000765682 390
36 3300025942 Ga0207689_10000195 Ga0207689_1000019547 390
37 3300026023 Ga0207677_10045788 Ga0207677_100457881 390
38 3300026089 Ga0207648_10004178 Ga0207648_1000417813 390
39 3300028654 Ga0265322_10010177 Ga0265322_100101772 390
40 3300031250 Ga0265331_10006392 Ga0265331_100063921 390
41 3300031616 Ga0307508_10000160 Ga0307508_100001601 390
42 3300045051 Ga0451576_0000206 Ga0451576_0000206_64884_66059 390
43 3300045051 Ga0451576_0052201 Ga0451576_0052201_652_1830 390
44 3300005329 Ga0070683_100117242 Ga0070683_1001172421 391
45 3300005436 Ga0070713_100014372 Ga0070713_1000143723 391
46 3300013105 Ga0157369_10236321 Ga0157369_102363212 391
47 3300025928 Ga0207700_10014008 Ga0207700_100140083 391
48 3300025944 Ga0207661_10011115 Ga0207661_100111154 391
49 3300028653 Ga0265323_10013813 Ga0265323_100138133 391
50 3300028653 Ga0265323_10026675 Ga0265323_100266753 391
51 3300028666 Ga0265336_10022411 Ga0265336_100224112 391
52 3300031235 Ga0265330_10048906 Ga0265330_100489062 391
53 3300031240 Ga0265320_10042583 Ga0265320_100425832 391
54 3300031251 Ga0265327_10021539 Ga0265327_100215393 391
55 3300031251 Ga0265327_10061578 Ga0265327_100615781 391
56 3300031344 Ga0265316_10004246 Ga0265316_1000424612 391
57 3300031344 Ga0265316_10106694 Ga0265316_101066942 391
58 3300031548 Ga0307408_100001027 Ga0307408_10000102710 391
59 3300031711 Ga0265314_10033384 Ga0265314_100333842 391
60 3300031711 Ga0265314_10041445 Ga0265314_100414452 391
61 3300037471 Ga0395905_0244437 Ga0395905_0244437_198_1466 391
62 3300044673 Ga0453683_0012658 Ga0453683_0012658_675_1853 391
63 3300045051 Ga0451576_0089499 Ga0451576_0089499_758_1936 391
64 3300046648 Ga0495611_0043736 Ga0495611_0043736_689_1873 391
65 3300049570 Ga0501033_0002253 Ga0501033_0002253_12417_13595 391
66 3300049571 Ga0501034_0251275 Ga0501034_0251275_59_1237 391
67 3300049572 Ga0501036_0038301 Ga0501036_0038301_145_1323 391
68 3300049573 Ga0501037_0120283 Ga0501037_0120283_597_1775 391
69 3300049574 Ga0501038_0092801 Ga0501038_0092801_139_1317 391
70 3300049575 Ga0501039_0292073 Ga0501039_0292073_73_1251 391
71 3300049578 Ga0501042_0009135 Ga0501042_0009135_4966_6144 391
72 3300049579 Ga0501043_0025288 Ga0501043_0025288_2734_3912 391
73 3300049580 Ga0501046_0022886 Ga0501046_0022886_1727_2920 391
74 3300049580 Ga0501046_0111126 Ga0501046_0111126_123_1301 391
75 3300049581 Ga0501047_0011883 Ga0501047_0011883_6822_8015 391
76 3300049582 Ga0501048_0001530 Ga0501048_0001530_16017_17195 391
77 3300049584 Ga0501068_0074482 Ga0501068_0074482_139_1317 391
78 3300049589 Ga0501073_0191851 Ga0501073_0191851_11_1189 391
79 3300049744 Ga0501083_0001317 Ga0501083_0001317_13641_14987 391
80 3300049744 Ga0501083_0036376 Ga0501083_0036376_1429_2637 391
81 3300049822 Ga0501035_0003769 Ga0501035_0003769_2387_3565 391
82 3300049822 Ga0501035_0006208 Ga0501035_0006208_5912_7105 391
83 3300053139 Ga0500568_0022194 Ga0500568_0022194_725_1924 391
84 3300028563 Ga0265319_1003254 Ga0265319_10032549 392
85 3300028577 Ga0265318_10022990 Ga0265318_100229902 392
86 3300028800 Ga0265338_10002481 Ga0265338_1000248118 392
87 3300029957 Ga0265324_10003114 Ga0265324_100031142 392
88 3300031240 Ga0265320_10001565 Ga0265320_1000156514 392
89 3300031251 Ga0265327_10023338 Ga0265327_100233382 392
90 3300031711 Ga0265314_10004905 Ga0265314_100049054 392
91 3300044712 Ga0453684_0000001 Ga0453684_0000001_1720410_1721597 392
92 3300028577 Ga0265318_10003686 Ga0265318_100036862 393
93 3300045051 Ga0451576_0137784 Ga0451576_0137784_531_1775 393
94 3300049823 Ga0501044_0001947 Ga0501044_0001947_22564_23754 393
95 3300028653 Ga0265323_10033003 Ga0265323_100330032 394
96 3300031240 Ga0265320_10002577 Ga0265320_100025777 394
97 3300031852 Ga0307410_10000005 Ga0307410_1000000520 394
98 3300031903 Ga0307407_10012864 Ga0307407_100128642 394
99 3300031995 Ga0307409_100000038 Ga0307409_1000000387 394
100 3300028563 Ga0265319_1000374 Ga0265319_10003748 396
101 3300028577 Ga0265318_10027379 Ga0265318_100273793 396
102 3300028800 Ga0265338_10001187 Ga0265338_100011872 396
103 3300031240 Ga0265320_10021993 Ga0265320_100219931 396
104 3300031241 Ga0265325_10028219 Ga0265325_100282192 396
105 3300031247 Ga0265340_10010704 Ga0265340_100107043 396
106 3300031595 Ga0265313_10001993 Ga0265313_1000199310 396
107 3300005338 Ga0068868_100146640 Ga0068868_1001466402 397
108 3300028563 Ga0265319_1001795 Ga0265319_10017957 397
109 3300028577 Ga0265318_10003123 Ga0265318_100031237 397
110 3300031235 Ga0265330_10007147 Ga0265330_100071473 397
111 3300031595 Ga0265313_10029503 Ga0265313_100295031 397
112 3300031711 Ga0265314_10012874 Ga0265314_100128744 397
113 iso_pu_bacteria 2786546940 2788434829 399
114 3300028653 Ga0265323_10015827 Ga0265323_100158272 402
115 3300049570 Ga0501033_0011049 Ga0501033_0011049_1810_3078 404
116 3300049573 Ga0501037_0013085 Ga0501037_0013085_1897_3165 404
117 3300049580 Ga0501046_0000504 Ga0501046_0000504_10907_12175 404
118 3300049581 Ga0501047_0200004 Ga0501047_0200004_443_1711 404
119 3300049822 Ga0501035_0059817 Ga0501035_0059817_724_1992 404
120 3300049823 Ga0501044_0001684 Ga0501044_0001684_19931_21199 404
121 3300003320 rootH2_10035712 rootH2_100357126 405
122 3300003323 rootH1_10101701 rootH1_101017011 405
123 3300005577 Ga0068857_100029039 Ga0068857_1000290392 405
124 3300005614 Ga0068856_100012349 Ga0068856_1000123492 405
125 3300026078 Ga0207702_10001050 Ga0207702_100010506 405

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11799

IMS_C

impB/mucB/samB family C-terminal domain

299

408

0.97

PF00817

IMS

impB/mucB/samB family

66

212

0.94

PF11798

IMS_HHH

IMS family HHH motif

224

255

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1im4-assembly1.cif.gz_A crystal structure of a dinb homolog (dbh) lesion bypass dna polymerase catalytic fragment from sulfolobus solfataricus 0.9043 4 203
4dez-assembly1.cif.gz_A structure of msdpo4 0.8859 6 235
1im4-assembly1.cif.gz_A crystal structure of a dinb homolog (dbh) lesion bypass dna polymerase catalytic fragment from sulfolobus solfataricus 0.8804 4 203
4dez-assembly1.cif.gz_A structure of msdpo4 0.8646 6 235
4f4y-assembly2.cif.gz_B y-family dna polymerase chimera dbh-dpo4-dbh 0.8576 6 342
ID Description Score Start End Superfamily
af_Q2FWZ5_4_63_3.40.1170.60 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.9738 15 70 3.40.1170.60
af_P34409_94_147_3.40.1170.60 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.9427 15 69 3.40.1170.60
4f50A02 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.9408 15 75 3.40.1170.60
af_A4ICX7_70_129_3.40.1170.60 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.9383 17 73 3.40.1170.60
4ir1A02 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.9381 23 72 3.40.1170.60
ID Description Score Start End GO Terms
AF-A0A2D5VMH9-F1-model_v4 UmuC domain-containing protein 0.9588 4 108 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-W2N4Q9-F1-model_v4 UmuC domain-containing protein 0.9488 4 109 GO:0003887
GO:0005634
GO:0042276
AF-A0A3R8SKE7-F1-model_v4 DNA polymerase IV 0.9406 4 166 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A6I2YTG4-F1-model_v4 DNA polymerase IV 0.9384 5 188 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A7X6TQ29-F1-model_v4 DNA polymerase IV 0.9309 2 164 GO:0003887
GO:0005829
GO:0009432
GO:0042276

Feature Viewer

pLDDT pTM Quality
84.26 0.6 Medium
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Predicted Structure (AlphaFold2)

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