F129645

General Info

Members Datasets Scaffolds Average Seq Length
126 98 126 870

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100000250|Ga0070707_10000025018
Length 919
Sequence MLSRRATAVVLAALPLVLLLLLDERGLVVAADHQVPTPEQFLGFRVGTDKKLARWDKIVEYLQLVARASDRVRFRELGKTTNNHPFVLLEISAPETLKNLDHFKQLERRLYFQGGSPTEAEREEVFRSGKAVVLVTCNIHSTEIGASQMVLELVHRLATDDSPLVKKILDRTIFLLVPSLNPDGQIMVTDWYNKNVGTEFEASPLPWLYHPYIGHDNNRDLYMFTQKESQLTARLLWHDWFPSVWLDEHQMGSQGARIFVMPATDPINPNVHPLVYRWNGIFGQAQAAALEAAGKEGIIYNSTYTNFWQGAMAWSGWWHNQIGLLTEVASARVASPTEQRRAQPGRQPEPAAEDFQAQMRRQMENPNEPLPPPRDVTPRTEYPRPWLGGRWTLRDIVDYELIATMALLETAADQREQLLRQIYQINRATVESGAKGDPAAIIINAQAQHDPRAALHLLEKLRMAGVEISRVEAEFEADGKKYPAGTFVIPMNQVFARYAKDLLEKQTYPEVRRSPNSPPEPPYDVTAWSLGMQMGVETIFVKKSFPASVRLTRLDEVFKPSGSVSGSGRGYEFDYQGPASAIAINRLLKLKETQVMPLVLTTWRTKDGLSSKVAILKTRSEQIEPLARELGISMRAAENKLLLSVEDVLKQNSGPQISIPPEATSMISLRRPRVGLYQSWTANMDEGWTRWVLEQYEFPYTTLHNAELKAGKLREKFDALILPDQQVRDILEGFDFKAVRPEYRGGIGDEGVAALREFVRNGGTLVALGASCDLIIDKFPIPVRNLKRGLTREQHYAPGTIVRVQVDTTHPVGLGMPAETYGFYNNSPFFALTEGFASQRASVVVRYPNTGVLASGWLRGEDLMTGRGAVVAVEMNPGRIILFGLRPQHRAQTQATFPLLFNALFWSAGQAANGSPAGS

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
66 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
67 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
68 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
69 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
70 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
71 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
72 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
73 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
74 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
79 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
80 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
81 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
82 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
83 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
84 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
89 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
93 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
94 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
95 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
96 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
97 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
98 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.56
Nodule 0
Rhizoplane 3.17
Rhizosphere 88.89
Stem 0
Stem Tuber 0
Unclassified 2.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100000074 3300005329 Bacteria 68532
2 Ga0070683_100059884 3300005329 Bacteria 3538
3 Ga0070669_100009818 3300005353 Bacteria 6817
4 Ga0070675_100002382 3300005354 Bacteria 13997
5 Ga0070671_100052412 3300005355 Bacteria 3392
6 Ga0070688_100007152 3300005365 Bacteria 6007
7 Ga0070667_100052367 3300005367 Bacteria 3445
8 Ga0070703_10000068 3300005406 Bacteria 52295
9 Ga0070714_100026712 3300005435 Bacteria 4773
10 Ga0070713_100014572 3300005436 Bacteria 5845
11 Ga0070694_100001468 3300005444 Bacteria 13822
12 Ga0070678_100036350 3300005456 Bacteria 3447
13 Ga0070681_10018120 3300005458 Bacteria 7040
14 Ga0070681_10034528 3300005458 Bacteria 5078
15 Ga0070706_100000141 3300005467 Bacteria 90763
16 Ga0070707_100000250 3300005468 Bacteria 53730
17 Ga0070698_100004169 3300005471 Bacteria 15891
18 Ga0070699_100000655 3300005518 Bacteria 32377
19 Ga0070679_100046208 3300005530 Bacteria 4340
20 Ga0070684_100000128 3300005535 Bacteria 50079
21 Ga0070686_100000232 3300005544 Bacteria 38298
22 Ga0070695_100014272 3300005545 Bacteria 4788
23 Ga0070696_100000246 3300005546 Bacteria 32725
24 Ga0070665_100005683 3300005548 Bacteria 12816
25 Ga0070704_100010136 3300005549 Bacteria 5731
26 Ga0068855_100007737 3300005563 Bacteria 12978
27 Ga0068857_100013537 3300005577 Bacteria 7105
28 Ga0070702_100000567 3300005615 Bacteria 13457
29 Ga0081455_10005606 3300005937 Bacteria 13719
30 Ga0081455_10048473 3300005937 Bacteria 3670
31 Ga0081539_10006372 3300005985 Bacteria 11357
32 Ga0075365_10011426 3300006038 Bacteria 5220
33 Ga0075367_10013903 3300006178 Bacteria 4343
34 Ga0097621_100060763 3300006237 Bacteria 3099
35 Ga0075434_100000019 3300006871 Bacteria 73391
36 Ga0075434_100019817 3300006871 Bacteria 6512
37 Ga0075434_100038943 3300006871 Bacteria 4710
38 Ga0075434_100042052 3300006871 Bacteria 4529
39 Ga0075436_100009517 3300006914 Bacteria 6647
40 Ga0075435_100000041 3300007076 Bacteria 66202
41 Ga0075435_100001918 3300007076 Bacteria 13543
42 Ga0075435_100002730 3300007076 Bacteria 11785
43 Ga0105240_10013906 3300009093 Bacteria 11018
44 Ga0105240_10123695 3300009093 Bacteria 3112
45 Ga0114129_10001188 3300009147 Bacteria 34556
46 Ga0114129_10002141 3300009147 Bacteria 27226
47 Ga0114129_10002781 3300009147 Bacteria 24387
48 Ga0114129_10021721 3300009147 Bacteria 9108
49 Ga0114129_10035522 3300009147 Bacteria 7040
50 Ga0114129_10134107 3300009147 Unclassified 3399
51 Ga0105242_10004885 3300009176 Bacteria 10378
52 Ga0105248_10018671 3300009177 Bacteria 7666
53 Ga0157378_10007225 3300013297 Bacteria 9702
54 Ga0163162_10070110 3300013306 Bacteria 3557
55 Ga0157379_10015910 3300014968 Bacteria 6612
56 Ga0163161_10010789 3300017792 Bacteria 6330
57 Ga0213876_10001731 3300021384 Bacteria 13267
58 Ga0207697_10000485 3300025315 Bacteria 22453
59 Ga0207653_10000020 3300025885 Bacteria 136681
60 Ga0207688_10002387 3300025901 Bacteria 10110
61 Ga0207684_10000178 3300025910 Bacteria 104803
62 Ga0207707_10015258 3300025912 Bacteria 6689
63 Ga0207695_10007611 3300025913 Bacteria 13725
64 Ga0207662_10022257 3300025918 Bacteria 3632
65 Ga0207652_10051509 3300025921 Bacteria 3530
66 Ga0207659_10000763 3300025926 Bacteria 19113
67 Ga0207700_10009610 3300025928 Bacteria 6054
68 Ga0207689_10008199 3300025942 Bacteria 9104
69 Ga0207661_10000073 3300025944 Bacteria 68550
70 Ga0207661_10005054 3300025944 Bacteria 9258
71 Ga0207679_10024547 3300025945 Bacteria 4134
72 Ga0207651_10000863 3300025960 Bacteria 13239
73 Ga0207651_10016172 3300025960 Bacteria 4362
74 Ga0207640_10009237 3300025981 Bacteria 5514
75 Ga0207703_10021300 3300026035 Bacteria 5076
76 Ga0207641_10042223 3300026088 Bacteria 3825
77 Ga0207675_100019415 3300026118 Bacteria 6341
78 Ga0207683_10007265 3300026121 Bacteria 9494
79 Ga0207428_10025885 3300027907 Bacteria 4903
80 Ga0268266_10009847 3300028379 Bacteria 8402
81 Ga0268266_10033165 3300028379 Bacteria 4391
82 Ga0316577_10007938 3300031733 Bacteria 5669
83 Ga0316583_10012823 3300032133 Bacteria 3024
84 Ga0373950_0000346 3300034818 Bacteria 5768
85 Ga0373959_0000767 3300034820 Bacteria 5492
86 Ga0373928_0000749 3300035084 Bacteria 6361
87 Ga0373929_0000684 3300035085 Bacteria 6553
88 Ga0373949_0000423 3300035090 Bacteria 14657
89 Ga0373941_0001714 3300035115 Bacteria 4705
90 Ga0373931_0012148 3300035691 Bacteria 4168
91 Ga0373933_0052599 3300035724 Bacteria 2438
92 Ga0373937_0086591 3300036401 Bacteria 2899
93 Ga0436364_0225689 3300037853 Bacteria 3646
94 Ga0436365_1844718 3300039437 Bacteria 39390
95 Ga0451577_0078540 3300042876 Bacteria 2942
96 Ga0453684_0018897 3300044712 Bacteria 10541
97 Ga0451576_0004432 3300045051 Bacteria 18246
98 Ga0495587_0035981 3300046536 Bacteria 2980
99 Ga0495645_0000999 3300046543 Bacteria 19269
100 Ga0495645_0009875 3300046543 Bacteria 6680
101 Ga0495675_0015790 3300047444 Bacteria 4776
102 Ga0496102_0024493 3300048905 Bacteria 5366
103 Ga0496112_0004474 3300048915 Bacteria 11855
104 Ga0496112_0055751 3300048915 Unclassified 3888
105 Ga0496112_0070053 3300048915 Bacteria 3465
106 Ga0501034_0002844 3300049571 Bacteria 20171
107 Ga0501047_0090847 3300049581 Bacteria 2931
108 nmdc:mga03683_1025_c1 3300050489 Bacteria 8142
109 nmdc:mga0k408_2615_c1 3300050493 Bacteria 9566
110 nmdc:mga05p37_12188_c1 3300050507 Bacteria 10266
111 nmdc:mga05p37_1535_c1 3300050507 Bacteria 26839
112 nmdc:mga05p37_28_c1 3300050507 Bacteria 114869
113 nmdc:mga09592_71964_c1 3300050508 Bacteria 2935
114 nmdc:mga0n895_22711_c1 3300050512 Bacteria 5884
115 nmdc:mga0n895_36372_c1 3300050512 Bacteria 4754
116 nmdc:mga0n895_53570_c1 3300050512 Bacteria 3964
117 nmdc:mga0n895_67594_c1 3300050512 Bacteria 3539
118 nmdc:mga0n895_8864_c1 3300050512 Bacteria 8756
119 nmdc:mga0rr50_1_c1 3300050513 Bacteria 558123
120 nmdc:mga0rr50_2015_c1 3300050513 Bacteria 11305
121 nmdc:mga0a205_35498_c1 3300050515 Unclassified 3357
122 nmdc:mga0a205_46766_c1 3300050515 Bacteria 4173
123 Ga0500555_000139 3300053103 Bacteria 34376
124 Ga0500568_0009071 3300053139 Bacteria 4744
125 Ga0500645_000010 3300053730 Bacteria 186517
126 Ga0501084_0033889 3300054114 Bacteria 4271

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025921 Ga0207652_10051509 Ga0207652_100515092 702
2 3300035724 Ga0373933_0052599 Ga0373933_0052599_165_2411 712
3 3300047444 Ga0495675_0015790 Ga0495675_0015790_23_2317 737
4 3300006038 Ga0075365_10011426 Ga0075365_100114263 799
5 3300049581 Ga0501047_0090847 Ga0501047_0090847_429_2894 806
6 3300053139 Ga0500568_0009071 Ga0500568_0009071_267_3020 830
7 3300005329 Ga0070683_100059884 Ga0070683_1000598842 832
8 3300005367 Ga0070667_100052367 Ga0070667_1000523672 832
9 3300006237 Ga0097621_100060763 Ga0097621_1000607631 832
10 3300007076 Ga0075435_100001918 Ga0075435_1000019187 832
11 3300013306 Ga0163162_10070110 Ga0163162_100701102 832
12 3300014968 Ga0157379_10015910 Ga0157379_100159103 832
13 3300025944 Ga0207661_10005054 Ga0207661_100050547 832
14 3300049571 Ga0501034_0002844 Ga0501034_0002844_672_3287 834
15 3300032133 Ga0316583_10012823 Ga0316583_100128231 835
16 3300042876 Ga0451577_0078540 Ga0451577_0078540_158_2827 835
17 3300006871 Ga0075434_100000019 Ga0075434_10000001954 836
18 3300007076 Ga0075435_100000041 Ga0075435_1000000414 836
19 3300009093 Ga0105240_10123695 Ga0105240_101236952 836
20 3300034818 Ga0373950_0000346 Ga0373950_0000346_2090_4891 836
21 3300034820 Ga0373959_0000767 Ga0373959_0000767_1335_4136 836
22 3300035084 Ga0373928_0000749 Ga0373928_0000749_2897_5698 836
23 3300035085 Ga0373929_0000684 Ga0373929_0000684_3260_6061 836
24 3300035090 Ga0373949_0000423 Ga0373949_0000423_6179_8980 836
25 3300035115 Ga0373941_0001714 Ga0373941_0001714_1500_4301 836
26 3300035691 Ga0373931_0012148 Ga0373931_0012148_216_3017 836
27 3300045051 Ga0451576_0004432 Ga0451576_0004432_14768_17569 836
28 3300050513 nmdc:mga0rr50_1_c1 nmdc:mga0rr50_1_c1_114259_116997 836
29 3300050513 nmdc:mga0rr50_2015_c1 nmdc:mga0rr50_2015_c1_46_2799 836
30 3300036401 Ga0373937_0086591 Ga0373937_0086591_34_2655 837
31 3300046543 Ga0495645_0000999 Ga0495645_0000999_14707_17328 837
32 3300025928 Ga0207700_10009610 Ga0207700_100096103 838
33 3300050489 nmdc:mga03683_1025_c1 nmdc:mga03683_1025_c1_4715_7339 838
34 3300050493 nmdc:mga0k408_2615_c1 nmdc:mga0k408_2615_c1_117_2744 838
35 3300005577 Ga0068857_100013537 Ga0068857_1000135372 839
36 3300025945 Ga0207679_10024547 Ga0207679_100245472 839
37 3300026118 Ga0207675_100019415 Ga0207675_1000194152 839
38 3300005436 Ga0070713_100014572 Ga0070713_1000145724 840
39 3300005355 Ga0070671_100052412 Ga0070671_1000524122 842
40 3300025942 Ga0207689_10008199 Ga0207689_100081992 842
41 3300025960 Ga0207651_10000863 Ga0207651_100008637 842
42 3300025981 Ga0207640_10009237 Ga0207640_100092372 842
43 3300026088 Ga0207641_10042223 Ga0207641_100422233 842
44 3300006871 Ga0075434_100019817 Ga0075434_1000198172 843
45 3300048905 Ga0496102_0024493 Ga0496102_0024493_2086_4818 843
46 3300048915 Ga0496112_0004474 Ga0496112_0004474_105_2837 843
47 3300050512 nmdc:mga0n895_36372_c1 nmdc:mga0n895_36372_c1_853_3546 843
48 3300050515 nmdc:mga0a205_46766_c1 nmdc:mga0a205_46766_c1_758_3451 843
49 3300005435 Ga0070714_100026712 Ga0070714_1000267122 845
50 3300027907 Ga0207428_10025885 Ga0207428_100258853 845
51 3300005353 Ga0070669_100009818 Ga0070669_1000098183 846
52 3300005365 Ga0070688_100007152 Ga0070688_1000071522 846
53 3300005458 Ga0070681_10018120 Ga0070681_100181202 846
54 3300006871 Ga0075434_100042052 Ga0075434_1000420523 846
55 3300009147 Ga0114129_10001188 Ga0114129_1000118812 846
56 3300009147 Ga0114129_10002141 Ga0114129_100021415 846
57 3300050507 nmdc:mga05p37_12188_c1 nmdc:mga05p37_12188_c1_1936_4593 846
58 3300050507 nmdc:mga05p37_1535_c1 nmdc:mga05p37_1535_c1_19122_21914 846
59 3300050512 nmdc:mga0n895_53570_c1 nmdc:mga0n895_53570_c1_729_3386 846
60 3300005530 Ga0070679_100046208 Ga0070679_1000462083 847
61 3300005544 Ga0070686_100000232 Ga0070686_1000002326 847
62 3300025918 Ga0207662_10022257 Ga0207662_100222571 847
63 3300005563 Ga0068855_100007737 Ga0068855_1000077374 848
64 3300005937 Ga0081455_10048473 Ga0081455_100484732 848
65 3300009147 Ga0114129_10134107 Ga0114129_101341072 848
66 3300050512 nmdc:mga0n895_67594_c1 nmdc:mga0n895_67594_c1_345_2975 848
67 3300050515 nmdc:mga0a205_35498_c1 nmdc:mga0a205_35498_c1_244_2988 848
68 3300006178 Ga0075367_10013903 Ga0075367_100139032 849
69 3300006871 Ga0075434_100038943 Ga0075434_1000389432 849
70 3300050512 nmdc:mga0n895_22711_c1 nmdc:mga0n895_22711_c1_1643_4312 849
71 3300005354 Ga0070675_100002382 Ga0070675_1000023825 851
72 3300005545 Ga0070695_100014272 Ga0070695_1000142721 851
73 3300005615 Ga0070702_100000567 Ga0070702_1000005676 851
74 3300005937 Ga0081455_10005606 Ga0081455_100056062 851
75 3300025926 Ga0207659_10000763 Ga0207659_100007634 851
76 3300054114 Ga0501084_0033889 Ga0501084_0033889_533_3151 851
77 3300005456 Ga0070678_100036350 Ga0070678_1000363502 852
78 3300005985 Ga0081539_10006372 Ga0081539_100063728 852
79 3300009093 Ga0105240_10013906 Ga0105240_100139067 854
80 3300025913 Ga0207695_10007611 Ga0207695_1000761110 854
81 3300048915 Ga0496112_0070053 Ga0496112_0070053_531_3182 854
82 3300050512 nmdc:mga0n895_8864_c1 nmdc:mga0n895_8864_c1_729_3527 854
83 3300005444 Ga0070694_100001468 Ga0070694_1000014682 855
84 3300025315 Ga0207697_10000485 Ga0207697_100004853 855
85 3300025901 Ga0207688_10002387 Ga0207688_100023872 855
86 3300028379 Ga0268266_10033165 Ga0268266_100331653 856
87 3300005548 Ga0070665_100005683 Ga0070665_1000056833 857
88 3300006914 Ga0075436_100009517 Ga0075436_1000095173 857
89 3300007076 Ga0075435_100002730 Ga0075435_1000027302 857
90 3300009147 Ga0114129_10035522 Ga0114129_100355222 857
91 3300009176 Ga0105242_10004885 Ga0105242_100048852 857
92 3300026035 Ga0207703_10021300 Ga0207703_100213003 857
93 3300028379 Ga0268266_10009847 Ga0268266_100098472 857
94 3300031733 Ga0316577_10007938 Ga0316577_100079383 857
95 3300044712 Ga0453684_0018897 Ga0453684_0018897_3761_6412 857
96 3300053730 Ga0500645_000010 Ga0500645_000010_10742_13435 858
97 3300005458 Ga0070681_10034528 Ga0070681_100345284 860
98 3300009177 Ga0105248_10018671 Ga0105248_100186716 860
99 3300025912 Ga0207707_10015258 Ga0207707_100152584 860
100 3300048915 Ga0496112_0055751 Ga0496112_0055751_685_3336 860
101 3300025960 Ga0207651_10016172 Ga0207651_100161722 861
102 3300026121 Ga0207683_10007265 Ga0207683_100072659 861
103 3300005406 Ga0070703_10000068 Ga0070703_1000006825 862
104 3300005467 Ga0070706_100000141 Ga0070706_10000014138 862
105 3300005471 Ga0070698_100004169 Ga0070698_1000041694 862
106 3300025885 Ga0207653_10000020 Ga0207653_1000002090 862
107 3300025910 Ga0207684_10000178 Ga0207684_1000017856 862
108 3300009147 Ga0114129_10021721 Ga0114129_100217216 863
109 3300037853 Ga0436364_0225689 Ga0436364_0225689_535_3222 863
110 3300050508 nmdc:mga09592_71964_c1 nmdc:mga09592_71964_c1_167_2839 863
111 3300013297 Ga0157378_10007225 Ga0157378_100072254 867
112 3300017792 Ga0163161_10010789 Ga0163161_100107894 867
113 3300046543 Ga0495645_0009875 Ga0495645_0009875_2593_5280 867
114 3300005468 Ga0070707_100000250 Ga0070707_10000025018 868
115 3300005518 Ga0070699_100000655 Ga0070699_10000065526 868
116 3300005546 Ga0070696_100000246 Ga0070696_1000002462 868
117 3300005549 Ga0070704_100010136 Ga0070704_1000101363 868
118 3300009147 Ga0114129_10002781 Ga0114129_100027817 868
119 3300050507 nmdc:mga05p37_28_c1 nmdc:mga05p37_28_c1_33237_35993 868
120 3300053103 Ga0500555_000139 Ga0500555_000139_28176_30869 868
121 3300046536 Ga0495587_0035981 Ga0495587_0035981_223_2895 873
122 3300021384 Ga0213876_10001731 Ga0213876_100017317 876
123 3300039437 Ga0436365_1844718 Ga0436365_1844718_2535_5231 876
124 3300005329 Ga0070683_100000074 Ga0070683_10000007435 877
125 3300005535 Ga0070684_100000128 Ga0070684_10000012823 877
126 3300025944 Ga0207661_10000073 Ga0207661_1000007324 877

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00246

Peptidase_M14

Zinc carboxypeptidase

58

254

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2d7j-assembly1.cif.gz_A crystal structure analysis of glutamine amidotransferase from pyrococcus horikoshii ot3 0.7396 637 869
8hx9-assembly1.cif.gz_B crystal structure of 4-amino-4-deoxychorismate synthase from streptomyces venezuelae with chorismate 0.736 636 868
4b6z-assembly3.cif.gz_C crystal structure of metallo-carboxypeptidase from burkholderia cenocepacia 0.7298 40 400
2d7j-assembly1.cif.gz_A crystal structure analysis of glutamine amidotransferase from pyrococcus horikoshii ot3 0.7197 637 869
7d97-assembly3.cif.gz_C crystal structure of n109p mutant of gatase subunit of methanocaldococcus jannaschii gmp synthetase 0.7193 637 866
ID Description Score Start End Superfamily
af_A0A0P0WSN8_58_197_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8599 37 171 3.40.630.10
3k2kA02 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.7486 40 311 3.40.630.10
2a9vA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.7294 633 872 3.40.50.880
af_Q2FYR8_1_187_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.7087 637 873 3.40.50.880
af_A4I8N7_938_1198_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.7039 57 249 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A497F3T8-F1-model_v4 deleted 0.9741 19 166
AF-A0A7C7G2N1-F1-model_v4 deleted 0.9704 17 218
AF-A0A348V2K0-F1-model_v4 Peptidase M14 0.9676 15 169 GO:0004181
GO:0005615
GO:0006508
GO:0008270
AF-A0A7X6AK90-F1-model_v4 deleted 0.9664 15 236
AF-A0A842MWF6-F1-model_v4 Peptidase M14 family protein 0.9644 19 204 GO:0004181
GO:0005615
GO:0006508
GO:0008270

Feature Viewer

pLDDT pTM Quality
86.83 0.88 High
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Predicted Structure (AlphaFold2)

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