F133015

General Info

Members Datasets Scaffolds Average Seq Length
127 92 254 814

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100034978|Ga0070670_1000349783
Length 868
Sequence VRAIGERLELEHPQPPVGLQSVTIPDLWQQQAVSHLRAGRDVVVSAPTGAGKTLIFELWSNQGRTRQQAIYTVPTRALANDKLAEWRARGWNVGIATGDLSENLHAPVLVATLETQKQRLIEGDGPALLVVDEYQMLADPDRGLNYELAIGLAPPGTQLLLLSGSVANPHHLVQWLNRLGRKASLVKHDIRPVPLDEVVVAQLSYQLPSEIRGYWPRVTAKALADGLGPILFFAPRRAHAEELAAELARQLPNPNPLLLSDAQKRLVGEHLGKLLKARVAYHHSGLSYAIRAGVIEPLAKAGQLRAVVATMGLAAGINFSLRSVAITAADYKRDGQVVPLKADEIHQMYGRAGRRGLDDAGHVLVTANELRIRDGHPVQLARSGMIDWSALLSLMAVASAAGRDPYAEAVRVQERLFTTKPIFLGVEASLKNPITPCGLRTDSERARHVRKRVRELQNSAGAWEIYPFWQDRRLGEIFTTIRPSPFPVIEAPRIRGEAAVQLAPEVLQPAGTGPVQFLPPPSDRLRPALTEPGALEKVGVGGLAVVEESSHGRLWGRSLVVAERVGPDRVLLSKPIRRLLGWNGREASQAVFDQTILPLLAEKLRQQHTPVVRFERHPTKVNALVSLAEITIKVPVDSLGVPLWKPVEREVFPPDCAICPLVPVCKQLPTATGTALLWRRLELVDTQGVPTRRGRVVSFFSGGDGLAVAAALEEVEYPLDELVYDLANLDAGFRFCGDENRWGGRLAQVCHQKYALQTISGYLENGLPPKYGDGANVVVRAIQKDPFSKHRFVTDFLGAGDIDRTVIEWRSSLRSVAHSPHLDWKRWTEFQHLAKATLQTTESPTITDLPPLELYQTKRIDHRLKLRR

Samples

Sample ID Description Type Environment
1 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
2 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
32 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
33 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
52 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
53 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
54 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
55 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
56 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
57 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
58 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
61 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
62 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
63 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
66 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
67 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
68 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
69 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
70 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
71 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
72 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
73 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
74 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
75 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
76 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
77 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
78 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
79 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
80 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 92.91
Stem 0
Stem Tuber 0
Unclassified 5.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100034978 3300005331 Bacteria 4324
2 JGI24033J26618_1000108 3300002155 Bacteria 11488
3 rootL2_10154164 3300003322 Unclassified 4737
4 rootH1_10057523 3300003323 Bacteria 20579
5 rootH1_10233531 3300003323 Bacteria 7385
6 Ga0070658_10001934 3300005327 Bacteria 17405
7 Ga0070676_10003308 3300005328 Bacteria 8378
8 Ga0070670_100003624 3300005331 Bacteria 12860
9 Ga0070670_100006301 3300005331 Bacteria 10045
10 Ga0070666_10003873 3300005335 Bacteria 9086
11 Ga0070689_100010837 3300005340 Bacteria 6515
12 Ga0070661_100000373 3300005344 Bacteria 35211
13 Ga0070671_100002867 3300005355 Bacteria 13416
14 Ga0070673_100001596 3300005364 Bacteria 13392
15 Ga0070688_100002239 3300005365 Bacteria 9755
16 Ga0070714_100039386 3300005435 Bacteria 3979
17 Ga0070706_100005343 3300005467 Bacteria 12241
18 Ga0070697_100017926 3300005536 Bacteria 5578
19 Ga0068853_100000024 3300005539 Bacteria 139787
20 Ga0070686_100003446 3300005544 Bacteria 8674
21 Ga0068855_100002563 3300005563 Bacteria 22398
22 Ga0068855_100110059 3300005563 Unclassified 3162
23 Ga0068856_100000348 3300005614 Bacteria 50454
24 Ga0068863_100098213 3300005841 Bacteria 2781
25 Ga0075428_100003521 3300006844 Bacteria 17144
26 Ga0105240_10000021 3300009093 Bacteria 394304
27 Ga0105242_10013748 3300009176 Bacteria 6264
28 Ga0105237_10004059 3300009545 Bacteria 17082
29 Ga0105239_10052720 3300010375 Unclassified 4461
30 Ga0157374_10002928 3300013296 Bacteria 14302
31 Ga0157374_10005028 3300013296 Bacteria 11088
32 Ga0157378_10100796 3300013297 Bacteria 2637
33 Ga0163162_10002203 3300013306 Bacteria 18303
34 Ga0163162_10015276 3300013306 Bacteria 7500
35 Ga0157375_10000165 3300013308 Bacteria 61905
36 Ga0157375_10000284 3300013308 Bacteria 46158
37 Ga0163163_10000018 3300014325 Bacteria 199503
38 Ga0213872_10002448 3300021361 Bacteria 10913
39 Ga0213876_10001222 3300021384 Bacteria 16220
40 Ga0207697_10000163 3300025315 Bacteria 33514
41 Ga0207645_10005348 3300025907 Bacteria 9333
42 Ga0207645_10014653 3300025907 Bacteria 5236
43 Ga0207684_10002906 3300025910 Bacteria 16981
44 Ga0207707_10038472 3300025912 Bacteria 4180
45 Ga0207695_10000083 3300025913 Bacteria 284102
46 Ga0207649_10000300 3300025920 Bacteria 38102
47 Ga0207650_10010253 3300025925 Bacteria 6423
48 Ga0207659_10027764 3300025926 Unclassified 3837
49 Ga0207670_10000576 3300025936 Bacteria 20270
50 Ga0207691_10000393 3300025940 Bacteria 43744
51 Ga0207667_10075334 3300025949 Bacteria 3504
52 Ga0207667_10090364 3300025949 Unclassified 3165
53 Ga0207668_10054396 3300025972 Bacteria 2778
54 Ga0207639_10000044 3300026041 Bacteria 139835
55 Ga0207702_10001498 3300026078 Bacteria 23085
56 Ga0207641_10053654 3300026088 Unclassified 3418
57 Ga0207683_10018375 3300026121 Bacteria 5965
58 Ga0268266_10008240 3300028379 Bacteria 9287
59 Ga0265338_10000948 3300028800 Bacteria 48795
60 Ga0265338_10011286 3300028800 Bacteria 10338
61 Ga0265320_10006221 3300031240 Bacteria 7545
62 Ga0265329_10002717 3300031242 Bacteria 7940
63 Ga0265339_10029572 3300031249 Bacteria 3108
64 Ga0265327_10004787 3300031251 Bacteria 11769
65 Ga0265314_10000087 3300031711 Bacteria 138681
66 Ga0373925_0003149 3300037068 Bacteria 12936
67 Ga0395899_0000022 3300037312 Bacteria 378509
68 Ga0395898_0000012 3300037466 Bacteria 480882
69 Ga0436364_1463632 3300037853 Bacteria 2922
70 Ga0436365_0363601 3300039437 Bacteria 58813
71 Ga0436365_1146516 3300039437 Bacteria 5511
72 Ga0436365_1721466 3300039437 Bacteria 44047
73 Ga0436360_1134497 3300039438 Bacteria 3693
74 Ga0436360_1369321 3300039438 Bacteria 5034
75 Ga0436362_0202301 3300039453 Bacteria 2716
76 Ga0436362_0497899 3300039453 Bacteria 3420
77 Ga0451577_0000911 3300042876 Bacteria 43516
78 Ga0451577_0028476 3300042876 Bacteria 5052
79 Ga0451577_0031614 3300042876 Bacteria 4775
80 Ga0453684_0002857 3300044712 Bacteria 40610
81 Ga0453684_0002874 3300044712 Bacteria 40400
82 Ga0453684_0006461 3300044712 Bacteria 22252
83 Ga0466971_0000044 3300044719 Bacteria 50630
84 Ga0466957_0018479 3300044842 Unclassified 4095
85 Ga0451576_0000441 3300045051 Bacteria 94687
86 Ga0451576_0000864 3300045051 Bacteria 58408
87 Ga0451576_0012394 3300045051 Bacteria 9577
88 Ga0451576_0058798 3300045051 Bacteria 4015
89 Ga0451576_0101710 3300045051 Bacteria 2989
90 Ga0451576_0115385 3300045051 Bacteria 2796
91 Ga0495592_0000015 3300046454 Bacteria 145683
92 Ga0495664_0002243 3300046477 Bacteria 10354
93 Ga0495628_0001893 3300046516 Bacteria 18989
94 Ga0495630_0002079 3300046517 Bacteria 13921
95 Ga0495630_0003988 3300046517 Bacteria 10326
96 Ga0495630_0017844 3300046517 Bacteria 5205
97 Ga0495666_0002373 3300046526 Bacteria 9390
98 Ga0495586_0000006 3300046535 Bacteria 168866
99 Ga0495586_0004239 3300046535 Bacteria 7670
100 Ga0495645_0003253 3300046543 Bacteria 11029
101 Ga0495645_0040907 3300046543 Bacteria 3379
102 Ga0495599_0006919 3300046678 Bacteria 6855
103 Ga0495658_0006765 3300046683 Bacteria 5642
104 Ga0495674_0004993 3300047319 Bacteria 12764
105 Ga0495674_0010766 3300047319 Bacteria 8651
106 Ga0495676_0009379 3300047321 Bacteria 8916
107 Ga0496125_0000109 3300048928 Bacteria 193628
108 Ga0501031_0000865 3300049568 Bacteria 18207
109 Ga0501032_0000608 3300049569 Bacteria 29001
110 Ga0501033_0000001 3300049570 Bacteria 795921
111 Ga0501033_0000043 3300049570 Bacteria 135426
112 Ga0501037_0000317 3300049573 Bacteria 40896
113 Ga0501038_0000020 3300049574 Bacteria 152738
114 Ga0501038_0001858 3300049574 Bacteria 19515
115 Ga0501039_0001035 3300049575 Bacteria 20327
116 Ga0501043_0000718 3300049579 Bacteria 29379
117 Ga0501043_0006583 3300049579 Bacteria 9311
118 Ga0501047_0000251 3300049581 Bacteria 63677
119 Ga0501070_0006104 3300049586 Bacteria 10269
120 Ga0501070_0016157 3300049586 Bacteria 6273
121 Ga0501080_0001404 3300049742 Bacteria 20176
122 Ga0501080_0011067 3300049742 Bacteria 8256
123 Ga0501035_0000003 3300049822 Bacteria 557461
124 Ga0501044_0000839 3300049823 Bacteria 36833
125 Ga0501044_0001743 3300049823 Bacteria 25385
126 Ga0501044_0091018 3300049823 Bacteria 3077
127 Ga0466962_0000006 3300061719 Bacteria 168917
128 Ga0070670_100034978
129 JGI24033J26618_1000108
130 rootL2_10154164
131 rootH1_10057523
132 rootH1_10233531
133 Ga0070658_10001934
134 Ga0070676_10003308
135 Ga0070670_100003624
136 Ga0070670_100006301
137 Ga0070666_10003873
138 Ga0070689_100010837
139 Ga0070661_100000373
140 Ga0070671_100002867
141 Ga0070673_100001596
142 Ga0070688_100002239
143 Ga0070714_100039386
144 Ga0070706_100005343
145 Ga0070697_100017926
146 Ga0068853_100000024
147 Ga0070686_100003446
148 Ga0068855_100002563
149 Ga0068855_100110059
150 Ga0068856_100000348
151 Ga0068863_100098213
152 Ga0075428_100003521
153 Ga0105240_10000021
154 Ga0105242_10013748
155 Ga0105237_10004059
156 Ga0105239_10052720
157 Ga0157374_10002928
158 Ga0157374_10005028
159 Ga0157378_10100796
160 Ga0163162_10002203
161 Ga0163162_10015276
162 Ga0157375_10000165
163 Ga0157375_10000284
164 Ga0163163_10000018
165 Ga0213872_10002448
166 Ga0213876_10001222
167 Ga0207697_10000163
168 Ga0207645_10005348
169 Ga0207645_10014653
170 Ga0207684_10002906
171 Ga0207707_10038472
172 Ga0207695_10000083
173 Ga0207649_10000300
174 Ga0207650_10010253
175 Ga0207659_10027764
176 Ga0207670_10000576
177 Ga0207691_10000393
178 Ga0207667_10075334
179 Ga0207667_10090364
180 Ga0207668_10054396
181 Ga0207639_10000044
182 Ga0207702_10001498
183 Ga0207641_10053654
184 Ga0207683_10018375
185 Ga0268266_10008240
186 Ga0265338_10000948
187 Ga0265338_10011286
188 Ga0265320_10006221
189 Ga0265329_10002717
190 Ga0265339_10029572
191 Ga0265327_10004787
192 Ga0265314_10000087
193 Ga0373925_0003149
194 Ga0395899_0000022
195 Ga0395898_0000012
196 Ga0436364_1463632
197 Ga0436365_0363601
198 Ga0436365_1146516
199 Ga0436365_1721466
200 Ga0436360_1134497
201 Ga0436360_1369321
202 Ga0436362_0202301
203 Ga0436362_0497899
204 Ga0451577_0000911
205 Ga0451577_0028476
206 Ga0451577_0031614
207 Ga0453684_0002857
208 Ga0453684_0002874
209 Ga0453684_0006461
210 Ga0466971_0000044
211 Ga0466957_0018479
212 Ga0451576_0000441
213 Ga0451576_0000864
214 Ga0451576_0012394
215 Ga0451576_0058798
216 Ga0451576_0101710
217 Ga0451576_0115385
218 Ga0495592_0000015
219 Ga0495664_0002243
220 Ga0495628_0001893
221 Ga0495630_0002079
222 Ga0495630_0003988
223 Ga0495630_0017844
224 Ga0495666_0002373
225 Ga0495586_0000006
226 Ga0495586_0004239
227 Ga0495645_0003253
228 Ga0495645_0040907
229 Ga0495599_0006919
230 Ga0495658_0006765
231 Ga0495674_0004993
232 Ga0495674_0010766
233 Ga0495676_0009379
234 Ga0496125_0000109
235 Ga0501031_0000865
236 Ga0501032_0000608
237 Ga0501033_0000001
238 Ga0501033_0000043
239 Ga0501037_0000317
240 Ga0501038_0000020
241 Ga0501038_0001858
242 Ga0501039_0001035
243 Ga0501043_0000718
244 Ga0501043_0006583
245 Ga0501047_0000251
246 Ga0501070_0006104
247 Ga0501070_0016157
248 Ga0501080_0001404
249 Ga0501080_0011067
250 Ga0501035_0000003
251 Ga0501044_0000839
252 Ga0501044_0001743
253 Ga0501044_0091018
254 Ga0466962_0000006

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00270

DEAD

DEAD/DEAH box helicase

26

172

0.87

PF00271

Helicase_C

Helicase conserved C-terminal domain

238

356

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zj2-assembly1.cif.gz_A archaeal dna helicase hjm apo state in form 1 0.8017 10 404
7zuw-assembly1.cif.gz_CA structure of rqt (c1) bound to the stalled ribosome in a disome unit from s. cerevisiae 0.777 26 353
2va8-assembly2.cif.gz_B dna repair helicase hel308 0.7725 12 404
5a9j-assembly4.cif.gz_D crystal structure of the helicase domain of human dna polymerase theta, apo-form 0.7714 11 404
5a9j-assembly3.cif.gz_C crystal structure of the helicase domain of human dna polymerase theta, apo-form 0.7705 12 404
ID Description Score Start End Superfamily
af_P9WMR1_2_191_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9234 10 179 3.40.50.300
af_K7K1N0_108_325_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9182 10 179 3.40.50.300
af_A0A2R8Q6L8_282_519_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9128 10 179 3.40.50.300
af_I1KZI0_21_231_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9045 10 179 3.40.50.300
4bujE01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8892 10 180 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3B9BF34-F1-model_v4 DEAD/DEAH box helicase 0.9504 1 291 GO:0003676
GO:0004386
GO:0005524
GO:0016787
AF-A0A3B9BF34-F1-model_v4 DEAD/DEAH box helicase 0.9347 1 291 GO:0003676
GO:0004386
GO:0005524
GO:0016787
AF-A0A7R9L767-F1-model_v4 Helicase ATP-binding domain-containing protein 0.9341 10 184 GO:0003676
GO:0004386
GO:0005524
GO:0016787
GO:0055087
GO:0070478
AF-A0A817U5A4-F1-model_v4 Helicase ATP-binding domain-containing protein 0.9312 10 184 GO:0003676
GO:0005524
GO:0005814
GO:0019894
GO:0036064
GO:0042073
GO:0097546
GO:0097730
GO:1905515
AF-A0A7S1WFC7-F1-model_v4 Helicase ATP-binding domain-containing protein 0.9291 10 182 GO:0000460
GO:0003676
GO:0004386
GO:0005524
GO:0005634
GO:0016787

Map