F136129

General Info

Members Datasets Scaffolds Average Seq Length
127 87 113 804

Family's Representative Sequence

Representative Sequence 3300053730|Ga0500645_001603|Ga0500645_001603_4627_7248
Length 873
Sequence MKFRKTILCSTAFALSFSAAAVAQPDAATGAPADKPAATEEETETIVVTAQFREQNLQDTPLAITAINAAMLESRSQTDISQVANQAPSVTLKPQGAAYGPSLGANIRGVGQFDFNPALEPGVGFYVDDVYYATLTGSILDLLDLDRVEVLRGPQGTLAGRNSIGGAVKLYSKKPEGTNSGTITAAYGSRNRVDLRASADFNLAPGIDARIAGVVKKQEGYVDRLDFGCMYPAGGSATFTPAFATTSNPTRAPMLMNPVGGVPAQTNDKNCLVGKEGEVGFVALRSQLRLRPSETIDINIIADYTDDDRTAAGSVLLLRTYPDGSVASPRYPLPLIPAPGSSPAQNYATASAQRDINPFLIGNTANANLLAYDNRFICGNFCNFATYNMPADTAIGQNGQPILVNGQPLKYLSSSADGRVRFKGWGVSGQIEWDAADNLKVNSITAYRRYKSIFSNDNDVSPMSHSLGYGPLTFRFFSQELRLNGKIGDQIEYTLGGYYSDQKSVYTSFQDLRSSGLQFQQSDPVNADSKALFAHVAWTPIDKLTLTGGIRYTKESKTYQYIRQQPYNDPTSLAANGVLPLNGTIGKYSGERVDYRANVQYALTDDVMAYAQFSTGYKGGGVNPRPFFVQQALAFGPETLNAYELGLKTDLFDRKLRFNVAAFLSKYKGIQLSLGNCTAITGAGFGAPCALPVNAGDADIKGIEIETTIRPIHGMSIDGSLSYIDFEYKRFGTYTSGTTTVAVGGPTNLNGPQYGDYAPFTPKWKWSIGAQYEVELGGDAGSLTLRIDGSYQSKIYTTSSNRSSNRIDAYFLSNARLTWRNAGRDLDVSLEVTNLFDKYYLLTLYDQTVGGQGYASGQPGRPREWAVSVKKKF

Samples

Sample ID Description Type Environment
1 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
2 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
3 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
4 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
5 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
6 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
7 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
8 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
9 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
10 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
11 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
12 3000865235 Altericroceibacterium indicum DSM 18604 Isolate Rhizosphere
13 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
54 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
57 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
58 3300042116 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126F_E14_082316_1792 Metagenome Rhizosphere
59 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
60 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
61 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
62 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
63 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
64 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
65 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
66 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
67 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
68 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
69 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
70 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
71 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
72 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
73 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
74 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
75 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
76 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
77 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
78 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
79 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
80 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
81 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
82 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
83 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
84 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
85 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
86 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
87 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.98
Metatranscriptomes 0
Isolates 11.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.98
Nodule 0
Rhizoplane 0
Rhizosphere 61.42
Stem 0
Stem Tuber 0
Unclassified 12.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10013156 3300003203 Bacteria 3566
2 Ga0055530_10007322 3300003791 Bacteria 4677
3 Ga0070668_100000096 3300005347 Bacteria 54447
4 Ga0070671_100000493 3300005355 Bacteria 27606
5 Ga0070671_100011996 3300005355 Bacteria 6970
6 Ga0070713_100009420 3300005436 Bacteria 6992
7 Ga0070662_100004212 3300005457 Bacteria 9061
8 Ga0070679_100045226 3300005530 Bacteria 4387
9 Ga0070665_100000238 3300005548 Bacteria 91410
10 Ga0070665_100027247 3300005548 Bacteria 5755
11 Ga0068855_100001661 3300005563 Bacteria 27824
12 Ga0068855_100006712 3300005563 Bacteria 13967
13 Ga0068855_100012436 3300005563 Bacteria 10280
14 Ga0068855_100063047 3300005563 Bacteria 4327
15 Ga0068859_100000532 3300005617 Bacteria 37821
16 Ga0068859_100003067 3300005617 Bacteria 16938
17 Ga0068863_100000012 3300005841 Bacteria 229774
18 Ga0068863_100003919 3300005841 Bacteria 14702
19 Ga0068863_100006887 3300005841 Bacteria 11138
20 Ga0068858_100002090 3300005842 Bacteria 20305
21 Ga0081455_10000075 3300005937 Bacteria 106313
22 Ga0081539_10000004 3300005985 Bacteria 555600
23 Ga0081539_10000038 3300005985 Bacteria 296079
24 Ga0097620_100003067 3300006931 Bacteria 16938
25 Ga0105240_10011780 3300009093 Bacteria 12148
26 Ga0105240_10024134 3300009093 Bacteria 8026
27 Ga0105240_10067268 3300009093 Bacteria 4441
28 Ga0105248_10002773 3300009177 Bacteria 19480
29 Ga0105237_10006396 3300009545 Bacteria 13073
30 Ga0105237_10014644 3300009545 Bacteria 8190
31 Ga0105238_10070850 3300009551 Bacteria 3484
32 Ga0105249_10032124 3300009553 Bacteria 4748
33 Ga0105246_10000423 3300011119 Bacteria 22570
34 Ga0157371_10007252 3300013102 Bacteria 9004
35 Ga0157369_10128349 3300013105 Unclassified 2687
36 Ga0157372_10049437 3300013307 Bacteria 4675
37 Ga0157376_10065932 3300014969 Bacteria 3060
38 Ga0209050_1000289 3300025298 Bacteria 106319
39 Ga0207705_10041542 3300025909 Bacteria 3299
40 Ga0207707_10088660 3300025912 Bacteria 2703
41 Ga0207695_10014661 3300025913 Bacteria 9270
42 Ga0207644_10000070 3300025931 Bacteria 74994
43 Ga0207644_10001810 3300025931 Bacteria 13890
44 Ga0207706_10002513 3300025933 Bacteria 17880
45 Ga0207711_10005999 3300025941 Bacteria 10271
46 Ga0207667_10012228 3300025949 Bacteria 9914
47 Ga0207667_10041070 3300025949 Bacteria 4921
48 Ga0207668_10000061 3300025972 Bacteria 89620
49 Ga0207678_10038132 3300026067 Bacteria 4177
50 Ga0207641_10000024 3300026088 Bacteria 250751
51 Ga0207675_100000071 3300026118 Bacteria 77575
52 Ga0268266_10000061 3300028379 Bacteria 255207
53 Ga0268266_10016279 3300028379 Bacteria 6355
54 Ga0307515_10027033 3300028794 Bacteria 9837
55 Ga0265338_10008084 3300028800 Bacteria 12861
56 Ga0307509_10000258 3300031507 Bacteria 86385
57 Ga0307509_10046156 3300031507 Bacteria 4692
58 Ga0307508_10001837 3300031616 Bacteria 23485
59 Ga0307416_100025404 3300032002 Bacteria 4341
60 Ga0307414_10001792 3300032004 Bacteria 11119
61 Ga0307414_10001964 3300032004 Bacteria 10645
62 Ga0439443_000705 3300042003 Bacteria 3227
63 Ga0450912_000057 3300042116 Bacteria 3548
64 Ga0466959_0021585 3300045049 Bacteria 4752
65 Ga0495583_0000010 3300046506 Bacteria 353523
66 Ga0495583_0000038 3300046506 Bacteria 243395
67 Ga0495583_0000490 3300046506 Bacteria 57602
68 Ga0495583_0005739 3300046506 Bacteria 8317
69 Ga0495606_0000121 3300046507 Bacteria 132126
70 Ga0495644_0009796 3300046523 Bacteria 3689
71 Ga0495621_0003171 3300046539 Bacteria 4504
72 Ga0495669_0000992 3300046684 Bacteria 11866
73 Ga0495670_0014213 3300046691 Bacteria 3917
74 Ga0495670_0025726 3300046691 Bacteria 2912
75 Ga0495671_0002264 3300046692 Bacteria 12239
76 Ga0495681_0022399 3300047470 Bacteria 3381
77 Ga0495686_0000072 3300047472 Bacteria 216371
78 Ga0495686_0001971 3300047472 Bacteria 20395
79 Ga0496121_0009295 3300048924 Bacteria 11339
80 Ga0496124_0001357 3300048927 Bacteria 36662
81 Ga0496126_0023293 3300048929 Bacteria 6000
82 Ga0501044_0019280 3300049823 Bacteria 7299
83 Ga0500643_000001 3300053087 Bacteria 1440111
84 Ga0500643_001559 3300053087 Bacteria 12978
85 Ga0500643_002244 3300053087 Bacteria 10179
86 Ga0500555_000032 3300053103 Bacteria 97468
87 Ga0500555_000367 3300053103 Bacteria 19088
88 Ga0500555_000878 3300053103 Bacteria 10699
89 Ga0500555_001221 3300053103 Bacteria 8306
90 Ga0500556_0000366 3300053104 Bacteria 33237
91 Ga0500608_000103 3300053122 Bacteria 34799
92 Ga0500608_001115 3300053122 Bacteria 9580
93 Ga0500608_003831 3300053122 Bacteria 5724
94 Ga0500642_0000001 3300053130 Bacteria 1468402
95 Ga0500655_000047 3300053133 Bacteria 33075
96 Ga0500568_0003652 3300053139 Bacteria 8467
97 Ga0500573_0000100 3300053140 Bacteria 37372
98 Ga0500590_000196 3300053148 Bacteria 18346
99 Ga0500604_0000016 3300053151 Bacteria 91519
100 Ga0500616_0000011 3300053153 Bacteria 732880
101 Ga0500616_0000016 3300053153 Bacteria 627087
102 Ga0500616_0000053 3300053153 Bacteria 291841
103 Ga0500616_0000220 3300053153 Bacteria 89104
104 Ga0500616_0002684 3300053153 Bacteria 14470
105 Ga0500616_0003431 3300053153 Bacteria 12107
106 Ga0500616_0026122 3300053153 Bacteria 3235
107 Ga0500622_0003233 3300053156 Bacteria 11069
108 Ga0500567_000906 3300053723 Bacteria 11312
109 Ga0500625_000001 3300053729 Bacteria 395993
110 Ga0500625_000042 3300053729 Bacteria 33111
111 Ga0500645_001068 3300053730 Bacteria 15161
112 Ga0500645_001603 3300053730 Bacteria 11240
113 Ga0500645_011667 3300053730 Bacteria 2861

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047472 Ga0495686_0000072 Ga0495686_0000072_184319_186697 716
2 3300053729 Ga0500625_000042 Ga0500625_000042_5638_8004 724
3 3300025909 Ga0207705_10041542 Ga0207705_100415421 728
4 3300042003 Ga0439443_000705 Ga0439443_000705_267_2681 734
5 3300005985 Ga0081539_10000038 Ga0081539_100000388 735
6 3300053087 Ga0500643_002244 Ga0500643_002244_7774_10131 735
7 3300046506 Ga0495583_0000038 Ga0495583_0000038_69611_72052 736
8 3300053103 Ga0500555_000878 Ga0500555_000878_1178_3619 736
9 3300005530 Ga0070679_100045226 Ga0070679_1000452261 739
10 3300046684 Ga0495669_0000992 Ga0495669_0000992_2490_4976 746
11 3300053133 Ga0500655_000047 Ga0500655_000047_20433_22919 746
12 3300053148 Ga0500590_000196 Ga0500590_000196_12256_14742 746
13 3300053156 Ga0500622_0003233 Ga0500622_0003233_7103_9589 746
14 3300053723 Ga0500567_000906 Ga0500567_000906_1724_4132 746
15 3300053729 Ga0500625_000001 Ga0500625_000001_114349_116757 746
16 3300026067 Ga0207678_10038132 Ga0207678_100381322 749
17 3300005548 Ga0070665_100000238 Ga0070665_10000023856 750
18 3300028379 Ga0268266_10000061 Ga0268266_10000061107 750
19 3300028379 Ga0268266_10016279 Ga0268266_100162793 750
20 3300014969 Ga0157376_10065932 Ga0157376_100659322 751
21 3300053151 Ga0500604_0000016 Ga0500604_0000016_19071_21515 753
22 3300005617 Ga0068859_100003067 Ga0068859_1000030679 755
23 3300006931 Ga0097620_100003067 Ga0097620_1000030679 755
24 3300009177 Ga0105248_10002773 Ga0105248_1000277321 755
25 3300025941 Ga0207711_10005999 Ga0207711_100059996 755
26 3300053140 Ga0500573_0000100 Ga0500573_0000100_10573_12936 755
27 3300053730 Ga0500645_011667 Ga0500645_011667_93_2447 755
28 3300028800 Ga0265338_10008084 Ga0265338_100080847 756
29 3300053122 Ga0500608_001115 Ga0500608_001115_2467_4875 756
30 3300053139 Ga0500568_0003652 Ga0500568_0003652_4539_6983 756
31 3300005457 Ga0070662_100004212 Ga0070662_1000042122 757
32 3300005563 Ga0068855_100063047 Ga0068855_1000630471 757
33 3300011119 Ga0105246_10000423 Ga0105246_100004236 757
34 3300025933 Ga0207706_10002513 Ga0207706_1000251311 757
35 3300005937 Ga0081455_10000075 Ga0081455_100000752 758
36 3300053122 Ga0500608_000103 Ga0500608_000103_25656_28103 758
37 3300053153 Ga0500616_0000011 Ga0500616_0000011_166123_168495 758
38 3300005563 Ga0068855_100006712 Ga0068855_10000671214 759
39 3300013307 Ga0157372_10049437 Ga0157372_100494373 759
40 3300032004 Ga0307414_10001792 Ga0307414_100017924 759
41 3300053153 Ga0500616_0000016 Ga0500616_0000016_478730_481066 759
42 iso_pu_bacteria 2739367664 2739648797 759
43 iso_pu_bacteria 2739367865 2740027270 759
44 iso_pu_bacteria 2919138771 2919142050 759
45 3300003791 Ga0055530_10007322 Ga0055530_100073222 760
46 3300005347 Ga0070668_100000096 Ga0070668_1000000965 760
47 3300005355 Ga0070671_100000493 Ga0070671_10000049326 760
48 3300005841 Ga0068863_100000012 Ga0068863_100000012104 760
49 3300005841 Ga0068863_100006887 Ga0068863_1000068873 760
50 3300025298 Ga0209050_1000289 Ga0209050_100028923 760
51 3300025931 Ga0207644_10000070 Ga0207644_1000007060 760
52 3300025972 Ga0207668_10000061 Ga0207668_1000006115 760
53 3300026088 Ga0207641_10000024 Ga0207641_10000024123 760
54 3300048927 Ga0496124_0001357 Ga0496124_0001357_26667_29054 760
55 iso_pu_bacteria 2738541275 2738711406 760
56 iso_pu_bacteria 2738541301 2738849831 760
57 iso_pu_bacteria 2738541304 2738865560 760
58 iso_pu_bacteria 2738543022 2739298078 760
59 iso_pu_bacteria 2738543033 2739359756 760
60 iso_pu_bacteria 2928100450 2928103201 760
61 iso_pu_bacteria 2928959182 2928962678 760
62 3300005563 Ga0068855_100001661 Ga0068855_1000016616 762
63 3300009093 Ga0105240_10024134 Ga0105240_100241342 762
64 3300046506 Ga0495583_0000010 Ga0495583_0000010_72300_74681 762
65 3300046691 Ga0495670_0025726 Ga0495670_0025726_369_2750 762
66 3300047472 Ga0495686_0001971 Ga0495686_0001971_11046_13478 762
67 3300053103 Ga0500555_000032 Ga0500555_000032_55470_57851 762
68 3300049823 Ga0501044_0019280 Ga0501044_0019280_3692_6193 763
69 iso_pu_bacteria 2919138771 2919140489 763
70 3300046507 Ga0495606_0000121 Ga0495606_0000121_40132_42660 764
71 3300009553 Ga0105249_10032124 Ga0105249_100321243 765
72 3300046506 Ga0495583_0000490 Ga0495583_0000490_22634_25048 765
73 3300046691 Ga0495670_0014213 Ga0495670_0014213_305_2719 765
74 3300053103 Ga0500555_000367 Ga0500555_000367_1960_4374 765
75 3300053153 Ga0500616_0000053 Ga0500616_0000053_40448_42832 765
76 3300053153 Ga0500616_0000220 Ga0500616_0000220_20371_22815 765
77 3300053153 Ga0500616_0026122 Ga0500616_0026122_643_3027 765
78 3300053730 Ga0500645_001068 Ga0500645_001068_3625_6207 765
79 3300028794 Ga0307515_10027033 Ga0307515_1002703310 766
80 3300053087 Ga0500643_000001 Ga0500643_000001_211664_214114 766
81 3300046506 Ga0495583_0005739 Ga0495583_0005739_3020_5611 767
82 3300053103 Ga0500555_001221 Ga0500555_001221_2707_5298 767
83 3300053104 Ga0500556_0000366 Ga0500556_0000366_6121_8643 767
84 iso_pu_bacteria 2919138771 2919141512 767
85 3300005436 Ga0070713_100009420 Ga0070713_1000094205 769
86 3300031507 Ga0307509_10000258 Ga0307509_1000025814 769
87 3300046523 Ga0495644_0009796 Ga0495644_0009796_1185_3587 770
88 3300046539 Ga0495621_0003171 Ga0495621_0003171_1280_3682 770
89 3300047470 Ga0495681_0022399 Ga0495681_0022399_683_3085 770
90 3300031616 Ga0307508_10001837 Ga0307508_100018379 771
91 3300046692 Ga0495671_0002264 Ga0495671_0002264_9789_12182 771
92 3300009093 Ga0105240_10067268 Ga0105240_100672682 772
93 3300013105 Ga0157369_10128349 Ga0157369_101283491 772
94 3300026118 Ga0207675_100000071 Ga0207675_10000007127 772
95 3300053087 Ga0500643_001559 Ga0500643_001559_144_2756 772
96 3300053122 Ga0500608_003831 Ga0500608_003831_3034_5553 772
97 iso_pu_bacteria 2643221588 2643951716 773
98 3300045049 Ga0466959_0021585 Ga0466959_0021585_786_3269 775
99 3300013102 Ga0157371_10007252 Ga0157371_100072523 777
100 3300032004 Ga0307414_10001964 Ga0307414_100019642 778
101 3300025912 Ga0207707_10088660 Ga0207707_100886601 779
102 3300025949 Ga0207667_10041070 Ga0207667_100410703 779
103 3300032002 Ga0307416_100025404 Ga0307416_1000254044 779
104 3300042116 Ga0450912_000057 Ga0450912_000057_886_3441 779
105 3300053130 Ga0500642_0000001 Ga0500642_0000001_1025904_1028468 779
106 3300053153 Ga0500616_0002684 Ga0500616_0002684_2496_5006 779
107 3300053153 Ga0500616_0003431 Ga0500616_0003431_2078_4633 779
108 3300005563 Ga0068855_100012436 Ga0068855_1000124368 780
109 3300025913 Ga0207695_10014661 Ga0207695_100146613 780
110 3300025949 Ga0207667_10012228 Ga0207667_100122283 780
111 3300009545 Ga0105237_10006396 Ga0105237_100063963 784
112 3300009551 Ga0105238_10070850 Ga0105238_100708502 784
113 3300053730 Ga0500645_001603 Ga0500645_001603_4627_7248 784
114 3300031507 Ga0307509_10046156 Ga0307509_100461563 788
115 3300009093 Ga0105240_10011780 Ga0105240_100117807 791
116 3300009545 Ga0105237_10014644 Ga0105237_100146443 791
117 iso_pu_bacteria 3000865235 3000867033 791
118 3300005548 Ga0070665_100027247 Ga0070665_1000272474 792
119 3300048929 Ga0496126_0023293 Ga0496126_0023293_3431_5866 793
120 3300005355 Ga0070671_100011996 Ga0070671_1000119962 797
121 3300005841 Ga0068863_100003919 Ga0068863_1000039192 797
122 3300005842 Ga0068858_100002090 Ga0068858_1000020909 797
123 3300025931 Ga0207644_10001810 Ga0207644_100018107 797
124 3300048924 Ga0496121_0009295 Ga0496121_0009295_3021_5522 797
125 3300005617 Ga0068859_100000532 Ga0068859_10000053229 808
126 3300003203 JGI25406J46586_10013156 JGI25406J46586_100131562 827
127 3300005985 Ga0081539_10000004 Ga0081539_1000000461 827

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

56

167

0.96

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

346

835

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
4epa-assembly1.cif.gz_A the crystal structure of the ferric yersiniabactin uptake receptor fyua from yersinia pestis 0.9149 52 827
4epa-assembly1.cif.gz_A the crystal structure of the ferric yersiniabactin uptake receptor fyua from yersinia pestis 0.8953 52 827
3rgn-assembly1.cif.gz_A crystal structure of spin-labeled btub w371r1 0.8466 37 827
3rgn-assembly1.cif.gz_A crystal structure of spin-labeled btub w371r1 0.8451 37 827
1nqe-assembly1.cif.gz_A outer membrane cobalamin transporter (btub) from e. coli 0.8362 39 827
ID Description Score Start End Superfamily
4epaA00 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.9071 52 827 2.40.170.20
4epaA00 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8874 52 827 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8377 164 827 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8359 164 827 2.40.170.20
3efmA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8243 167 827 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A2W4M3N6-F1-model_v4 TonB-dependent receptor 0.9379 63 827 GO:0006826
GO:0009279
AF-A0A2W4M3N6-F1-model_v4 TonB-dependent receptor 0.9365 63 827 GO:0006826
GO:0009279
AF-A0A2E3QL36-F1-model_v4 TonB-dependent receptor-like beta-barrel domain-containing protein 0.9195 717 827 GO:0006826
GO:0009279
AF-A0A5D0WM80-F1-model_v4 TonB-dependent receptor 0.9187 18 827 GO:0006826
GO:0009279
AF-A0A6N8UXL6-F1-model_v4 TonB-dependent receptor 0.904 722 825 GO:0009279

Feature Viewer

pLDDT pTM Quality
82.96 0.84 High
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Predicted Structure (AlphaFold2)

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