F136272

General Info

Members Datasets Scaffolds Average Seq Length
127 108 254 449

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8001781756|8001790361
Length 517
Sequence VKTVGAPTSGPIPADTAAAAPPAARSGRHANSTLVVLFLSLGGLAFAVLQSLVAPALPIIAQDLHSSTGDISWVLTAYLLSASVLTPILGRLGDMVGKRKMMLVVLVLLAAGTLLAALSTTLPVLVAARALQGAAGAIMPLSIGIVRDELPREKVSVTVGLLSAIFGIGAGLGIVLAGPIVEHLSWEWLFWFPLMLIGVALLGVLFGVPESPVRTPGRLDVLGAAILSVSLVSLLLAISKGREWGWDETKTISLLAVGVVALIAFVLVELRVREPLINMRLLAIRGVWATNLVGLAFGFAMFGTFLLIPMLLELPAATGYGFGKTVSQAGLFLMPTTMMMLVFGPLSGLLDRRYGPKLPLFLGAALVTAAYALPAAVHDSLWQLVASGLLTGAGMGLAFAAMSNAIIESVPATHTGEATSVNSIVRTIGGSVGTAVVAAVIAGNTTPQGLPTDQAFTSGFWVCAGVAVLAVVASLILPSARRRRAESVAAGVADLPAEPIELHAHLGHRDTARTTVS

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
9 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
10 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
11 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
12 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
13 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
14 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
19 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
20 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
21 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
22 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
23 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
24 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
33 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
34 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
35 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
36 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
37 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
38 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
39 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
40 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
41 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
42 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
43 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
44 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
45 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
46 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
47 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
48 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
49 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
50 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
51 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
52 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
53 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
54 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
55 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
56 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
57 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
58 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
59 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
60 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
61 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
62 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
63 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
64 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
65 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
66 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
67 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
68 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
69 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
70 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
73 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
74 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
75 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
76 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
77 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
78 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
79 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
80 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
81 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
82 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
83 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
84 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
85 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
86 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
87 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
88 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
89 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
90 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
91 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
92 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
93 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
94 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
95 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
96 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
97 2858882152 Micromonospora noduli MED15 Isolate Nodule
98 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
99 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
100 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
101 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
102 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
103 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
104 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
105 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
106 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
107 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
108 8054727385 Micromonospora alfalfae MED01 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.61
Metatranscriptomes 0
Isolates 13.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.96
Nodule 3.15
Rhizoplane 5.51
Rhizosphere 54.33
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10006971 3300003203 Bacteria 5188
2 Ga0070668_100010533 3300005347 Bacteria 6875
3 Ga0070709_10003642 3300005434 Bacteria 8272
4 Ga0070714_100060475 3300005435 Bacteria 3251
5 Ga0070713_100006202 3300005436 Bacteria 8267
6 Ga0070711_100016693 3300005439 Bacteria 4665
7 Ga0070679_100027372 3300005530 Bacteria 5611
8 Ga0068862_100099010 3300005844 Bacteria 2548
9 Ga0081538_10000540 3300005981 Bacteria 41719
10 Ga0081538_10029056 3300005981 Bacteria 3786
11 Ga0081538_10029856 3300005981 Bacteria 3714
12 Ga0081540_1014097 3300005983 Bacteria 5145
13 Ga0081539_10002042 3300005985 Bacteria 30343
14 Ga0070717_10038215 3300006028 Bacteria 3901
15 Ga0070716_100014743 3300006173 Bacteria 4010
16 Ga0070712_100016775 3300006175 Bacteria 4735
17 Ga0075428_100111428 3300006844 Bacteria 2981
18 Ga0111539_10050943 3300009094 Bacteria 4932
19 Ga0114129_10008346 3300009147 Bacteria 14769
20 Ga0105243_10102130 3300009148 Bacteria 2382
21 Ga0157370_10168491 3300013104 Bacteria 2036
22 Ga0157369_10132310 3300013105 Bacteria 2643
23 Ga0157369_10194398 3300013105 Bacteria 2131
24 Ga0157375_10042755 3300013308 Bacteria 4388
25 Ga0157380_10009144 3300014326 Bacteria 7086
26 Ga0213875_10024126 3300021388 Bacteria 2902
27 Ga0207699_10050211 3300025906 Bacteria 2458
28 Ga0207693_10024743 3300025915 Bacteria 4762
29 Ga0207663_10025663 3300025916 Bacteria 3410
30 Ga0207700_10087530 3300025928 Bacteria 2450
31 Ga0207664_10013663 3300025929 Bacteria 5836
32 Ga0207665_10024287 3300025939 Bacteria 3996
33 Ga0207668_10002478 3300025972 Bacteria 10778
34 Ga0268265_10071603 3300028380 Bacteria 2701
35 Ga0307517_10035410 3300028786 Bacteria 5653
36 Ga0307515_10000739 3300028794 Bacteria 75653
37 Ga0307515_10027014 3300028794 Bacteria 9842
38 Ga0307515_10053654 3300028794 Bacteria 5941
39 Ga0307515_10148678 3300028794 Bacteria 2463
40 Ga0307512_10051824 3300030522 Bacteria 3279
41 Ga0265340_10007458 3300031247 Bacteria 5937
42 Ga0307513_10002012 3300031456 Bacteria 28668
43 Ga0307513_10003860 3300031456 Bacteria 20162
44 Ga0307508_10002938 3300031616 Bacteria 17624
45 Ga0307508_10036742 3300031616 Bacteria 4410
46 Ga0307508_10038479 3300031616 Bacteria 4300
47 Ga0307516_10005974 3300031730 Bacteria 14390
48 Ga0307516_10014678 3300031730 Bacteria 8278
49 Ga0307516_10015238 3300031730 Bacteria 8099
50 Ga0307516_10141325 3300031730 Bacteria 2177
51 Ga0307409_100213344 3300031995 Bacteria 1737
52 Ga0307415_100042966 3300032126 Bacteria 3012
53 Ga0373940_0008526 3300035088 Bacteria 2356
54 Ga0373942_0000087 3300035207 Bacteria 19987
55 Ga0373935_0004982 3300035692 Bacteria 7814
56 Ga0436364_0249343 3300037853 Bacteria 6897
57 Ga0451853_2518570 3300041512 Bacteria 2710
58 Ga0466961_0009012 3300044693 Bacteria 6365
59 Ga0466970_0026840 3300044765 Bacteria 3019
60 Ga0466959_0016109 3300045049 Bacteria 5456
61 Ga0466958_0117491 3300045836 Bacteria 1663
62 Ga0495651_0001629 3300046462 Bacteria 17387
63 Ga0495606_0001567 3300046507 Bacteria 29974
64 Ga0495652_0004009 3300046529 Bacteria 14249
65 Ga0495640_0026184 3300046533 Bacteria 4218
66 Ga0495645_0023214 3300046543 Bacteria 4491
67 Ga0495668_0000410 3300046616 Bacteria 55937
68 Ga0495625_0000370 3300046660 Bacteria 68874
69 Ga0495600_0010996 3300046809 Bacteria 5631
70 Ga0495604_0074572 3300047317 Bacteria 2557
71 Ga0495626_0000025 3300048091 Bacteria 209356
72 Ga0496104_0306242 3300048907 Bacteria 1501
73 Ga0496108_0000666 3300048911 Bacteria 26483
74 Ga0496109_0026094 3300048912 Bacteria 5208
75 Ga0496110_0068110 3300048913 Bacteria 3150
76 Ga0496111_0151063 3300048914 Bacteria 1723
77 Ga0496112_0169371 3300048915 Bacteria 2150
78 Ga0496114_0027647 3300048917 Bacteria 4648
79 Ga0496117_0000254 3300048920 Bacteria 101006
80 Ga0496117_0061332 3300048920 Bacteria 2586
81 Ga0496122_0021373 3300048925 Bacteria 5796
82 Ga0496123_0019009 3300048926 Bacteria 5429
83 Ga0501040_0106465 3300049576 Bacteria 1959
84 Ga0501047_0052583 3300049581 Bacteria 3937
85 Ga0501077_0070754 3300049593 Bacteria 2211
86 Ga0501081_0055638 3300049743 Bacteria 2734
87 Ga0501044_0177254 3300049823 Bacteria 2100
88 nmdc:mga0yw44_88385_c1 3300050492 Bacteria 1954
89 Ga0495612_0016298 3300053078 Bacteria 2978
90 Ga0500635_0000347 3300053080 Bacteria 15185
91 Ga0500644_0005245 3300053088 Bacteria 3265
92 Ga0500644_0036635 3300053088 Bacteria 1598
93 Ga0500646_0000067 3300053090 Bacteria 29313
94 Ga0500650_0037668 3300053098 Bacteria 2223
95 Ga0500556_0000007 3300053104 Bacteria 331400
96 Ga0500652_018497 3300053131 Bacteria 2574
97 Ga0500568_0000009 3300053139 Bacteria 270298
98 Ga0500573_0006482 3300053140 Bacteria 6341
99 Ga0500573_0012029 3300053140 Bacteria 4854
100 Ga0500573_0021432 3300053140 Bacteria 3703
101 Ga0500577_0001034 3300053142 Bacteria 7187
102 Ga0500577_0008920 3300053142 Bacteria 2885
103 Ga0500588_0003908 3300053146 Bacteria 3190
104 Ga0500616_0000021 3300053153 Bacteria 484527
105 Ga0500616_0000940 3300053153 Bacteria 31769
106 Ga0500616_0001057 3300053153 Bacteria 29026
107 Ga0500645_002820 3300053730 Bacteria 7486
108 Ga0501084_0046639 3300054114 Bacteria 3630
109 Ga0501082_0065045 3300060353 Bacteria 3140
110 Ga0466962_0020266 3300061719 Bacteria 3196
111 8001790361 8001781756 Bacteria 9586736
112 2676483269 2675903059 Bacteria 8644972
113 2810365922 2808606700 Bacteria 3482157
114 2855673124 2855670206 Bacteria 7120389
115 2857293684 2857288857 Bacteria 7189066
116 2858887744 2858882152 Bacteria 7230291
117 2869067763 2869061728 Bacteria 7112407
118 2869069069 2869068681 Bacteria 7205615
119 2880500551 2880495981 Bacteria 7340502
120 2887479154 2887478801 Bacteria 8972725
121 2904498604 2904497146 Bacteria 4731781
122 2919541806 2919538618 Bacteria 4677069
123 2929229046 2929226422 Bacteria 7248583
124 8003834968 8003830390 Bacteria 6541657
125 8003871693 8003870546 Bacteria 7396674
126 8054709359 8054704163 Bacteria 7247792
127 8054727818 8054727385 Bacteria 7558670
128 JGI25406J46586_10006971
129 Ga0070668_100010533
130 Ga0070709_10003642
131 Ga0070714_100060475
132 Ga0070713_100006202
133 Ga0070711_100016693
134 Ga0070679_100027372
135 Ga0068862_100099010
136 Ga0081538_10000540
137 Ga0081538_10029056
138 Ga0081538_10029856
139 Ga0081540_1014097
140 Ga0081539_10002042
141 Ga0070717_10038215
142 Ga0070716_100014743
143 Ga0070712_100016775
144 Ga0075428_100111428
145 Ga0111539_10050943
146 Ga0114129_10008346
147 Ga0105243_10102130
148 Ga0157370_10168491
149 Ga0157369_10132310
150 Ga0157369_10194398
151 Ga0157375_10042755
152 Ga0157380_10009144
153 Ga0213875_10024126
154 Ga0207699_10050211
155 Ga0207693_10024743
156 Ga0207663_10025663
157 Ga0207700_10087530
158 Ga0207664_10013663
159 Ga0207665_10024287
160 Ga0207668_10002478
161 Ga0268265_10071603
162 Ga0307517_10035410
163 Ga0307515_10000739
164 Ga0307515_10027014
165 Ga0307515_10053654
166 Ga0307515_10148678
167 Ga0307512_10051824
168 Ga0265340_10007458
169 Ga0307513_10002012
170 Ga0307513_10003860
171 Ga0307508_10002938
172 Ga0307508_10036742
173 Ga0307508_10038479
174 Ga0307516_10005974
175 Ga0307516_10014678
176 Ga0307516_10015238
177 Ga0307516_10141325
178 Ga0307409_100213344
179 Ga0307415_100042966
180 Ga0373940_0008526
181 Ga0373942_0000087
182 Ga0373935_0004982
183 Ga0436364_0249343
184 Ga0451853_2518570
185 Ga0466961_0009012
186 Ga0466970_0026840
187 Ga0466959_0016109
188 Ga0466958_0117491
189 Ga0495651_0001629
190 Ga0495606_0001567
191 Ga0495652_0004009
192 Ga0495640_0026184
193 Ga0495645_0023214
194 Ga0495668_0000410
195 Ga0495625_0000370
196 Ga0495600_0010996
197 Ga0495604_0074572
198 Ga0495626_0000025
199 Ga0496104_0306242
200 Ga0496108_0000666
201 Ga0496109_0026094
202 Ga0496110_0068110
203 Ga0496111_0151063
204 Ga0496112_0169371
205 Ga0496114_0027647
206 Ga0496117_0000254
207 Ga0496117_0061332
208 Ga0496122_0021373
209 Ga0496123_0019009
210 Ga0501040_0106465
211 Ga0501047_0052583
212 Ga0501077_0070754
213 Ga0501081_0055638
214 Ga0501044_0177254
215 nmdc:mga0yw44_88385_c1
216 Ga0495612_0016298
217 Ga0500635_0000347
218 Ga0500644_0005245
219 Ga0500644_0036635
220 Ga0500646_0000067
221 Ga0500650_0037668
222 Ga0500556_0000007
223 Ga0500652_018497
224 Ga0500568_0000009
225 Ga0500573_0006482
226 Ga0500573_0012029
227 Ga0500573_0021432
228 Ga0500577_0001034
229 Ga0500577_0008920
230 Ga0500588_0003908
231 Ga0500616_0000021
232 Ga0500616_0000940
233 Ga0500616_0001057
234 Ga0500645_002820
235 Ga0501084_0046639
236 Ga0501082_0065045
237 Ga0466962_0020266
238 8001790361
239 2676483269
240 2810365922
241 2855673124
242 2857293684
243 2858887744
244 2869067763
245 2869069069
246 2880500551
247 2887479154
248 2904498604
249 2919541806
250 2929229046
251 8003834968
252 8003871693
253 8054709359
254 8054727818

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00083

Sugar_tr

Sugar (and other) transporter

295

490

0.91

PF07690

MFS_1

Major Facilitator Superfamily

39

434

0.88

PF07690

MFS_1

Major Facilitator Superfamily

293

509

0.8

PF00083

Sugar_tr

Sugar (and other) transporter

30

214

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.8206 6 410
8pnl-assembly1.cif.gz_A outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody 0.792 8 409
8t69-assembly1.cif.gz_A human vmat2 in complex with tetrabenazine 0.7819 10 416
8pnl-assembly2.cif.gz_C outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody 0.7797 8 409
7d5p-assembly2.cif.gz_B structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody 0.7786 11 411
ID Description Score Start End Superfamily
af_P9WG91_8_214_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.948 12 214 1.20.1250.20
af_P9WG87_21_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.946 13 198 1.20.1250.20
af_Q04301_34_211_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9401 10 184 1.20.1250.20
af_K7ML12_100_280_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9386 11 183 1.20.1250.20
af_P9WG87_21_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9315 13 198 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A4Z0HCW8-F1-model_v4 MFS transporter 0.9457 7 186 GO:0016020
GO:0022857
GO:0046677
AF-A0A2E6BHY6-F1-model_v4 MFS transporter 0.9413 6 149 GO:0005886
GO:0022857
AF-A0A3S1U0X0-F1-model_v4 MFS transporter 0.9352 18 152 GO:0005886
GO:0022857
AF-A0A379LT24-F1-model_v4 Probable metabolite transport protein CsbC 0.9321 8 188 GO:0005886
GO:0022857
AF-C9BSR1-F1-model_v4 deleted 0.9263 10 185

Map