F140983

General Info

Members Datasets Scaffolds Average Seq Length
129 92 129 248

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100245340|Ga0070698_1002453402
Length 263
Sequence MESGDGVILGIDALRLRRGTRDVLRGVTMRVQRGELVALMGLSGGGKTTVLRSVAALEPFDGGAIDVDGVVLRPGPLPPRSAAKELRKRVGMVFQLHYLFEHLTALQNVTLAPVNVAHVPIANAERRAMELLESLGVAHRVNALPRELSGGEAQRVAIARAMAMEPPLLLMDEPTASLDPARRTELGETLVELTRSGRTLVVTTHDDDFARAFANRVVILAEGEVVEEGDAREVLTHPQHPATRRLLQGELGGRSSVDDVRNS

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
78 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
79 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
82 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
83 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
84 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
85 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
86 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
87 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
88 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
89 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
90 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
91 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
92 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 93.02
Stem 0
Stem Tuber 0
Unclassified 6.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100000033 3300005329 Bacteria 135305
2 Ga0070670_100000253 3300005331 Bacteria 48257
3 Ga0070670_100013332 3300005331 Bacteria 7039
4 Ga0068869_100099354 3300005334 Bacteria 2199
5 Ga0068868_100000173 3300005338 Bacteria 42712
6 Ga0070687_100016954 3300005343 Bacteria 3338
7 Ga0070692_10005036 3300005345 Bacteria 5587
8 Ga0070675_100000006 3300005354 Bacteria 280013
9 Ga0070701_10001567 3300005438 Bacteria 8493
10 Ga0070700_100000158 3300005441 Bacteria 39651
11 Ga0070694_100660445 3300005444 Bacteria 847
12 Ga0070708_100091275 3300005445 Bacteria 2773
13 Ga0070708_100597390 3300005445 Bacteria 1040
14 Ga0070662_100113674 3300005457 Bacteria 2066
15 Ga0070685_10010686 3300005466 Bacteria 4778
16 Ga0070706_100131819 3300005467 Bacteria 2332
17 Ga0070706_100178932 3300005467 Bacteria 1980
18 Ga0070707_100093002 3300005468 Bacteria 2919
19 Ga0070698_100245340 3300005471 Bacteria 1724
20 Ga0070698_100260222 3300005471 Bacteria 1667
21 Ga0070699_100098485 3300005518 Bacteria 2562
22 Ga0070699_100359700 3300005518 Bacteria 1312
23 Ga0070684_100000183 3300005535 Bacteria 43327
24 Ga0070686_100110877 3300005544 Bacteria 1869
25 Ga0070693_100071053 3300005547 Bacteria 2050
26 Ga0070704_100077373 3300005549 Bacteria 2437
27 Ga0068854_100002833 3300005578 Bacteria 10780
28 Ga0068854_100005908 3300005578 Bacteria 7750
29 Ga0070702_100114345 3300005615 Bacteria 1679
30 Ga0070702_100251665 3300005615 Bacteria 1198
31 Ga0068852_100385301 3300005616 Bacteria 1376
32 Ga0068859_100000004 3300005617 Bacteria 470249
33 Ga0068861_100025854 3300005719 Bacteria 4263
34 Ga0068861_100101681 3300005719 Bacteria 2287
35 Ga0068870_10111461 3300005840 Bacteria 1563
36 Ga0070717_10000048 3300006028 Bacteria 104474
37 Ga0070716_100282109 3300006173 Bacteria 1147
38 Ga0075428_100300283 3300006844 Bacteria 1726
39 Ga0075434_100022114 3300006871 Bacteria 6192
40 Ga0075434_100395607 3300006871 Bacteria 1403
41 Ga0075436_100010758 3300006914 Bacteria 6276
42 Ga0097620_100000004 3300006931 Bacteria 470249
43 Ga0075435_100000721 3300007076 Bacteria 20542
44 Ga0075435_100026650 3300007076 Bacteria 4513
45 Ga0075435_100054590 3300007076 Bacteria 3225
46 Ga0075435_100085079 3300007076 Bacteria 2603
47 Ga0105244_10026322 3300009036 Bacteria 3149
48 Ga0105240_10009209 3300009093 Bacteria 14005
49 Ga0105245_10000003 3300009098 Bacteria 488207
50 Ga0105245_10001214 3300009098 Bacteria 23304
51 Ga0105245_10599467 3300009098 Bacteria 1128
52 Ga0105247_10045909 3300009101 Bacteria 2681
53 Ga0114129_10090516 3300009147 Bacteria 4241
54 Ga0114129_10218149 3300009147 Bacteria 2575
55 Ga0114129_11116490 3300009147 Bacteria 986
56 Ga0105242_10003937 3300009176 Bacteria 11538
57 Ga0105238_10000002 3300009551 Bacteria 772711
58 Ga0105239_10050191 3300010375 Bacteria 4577
59 Ga0157369_10007019 3300013105 Bacteria 12994
60 Ga0157374_10000005 3300013296 Bacteria 646767
61 Ga0157378_10000372 3300013297 Bacteria 44367
62 Ga0157378_10000468 3300013297 Bacteria 38520
63 Ga0157378_10161577 3300013297 Bacteria 2095
64 Ga0157375_10000009 3300013308 Bacteria 366440
65 Ga0157375_10000839 3300013308 Bacteria 26880
66 Ga0157377_10000001 3300014745 Bacteria 623098
67 Ga0157377_10000125 3300014745 Bacteria 49824
68 Ga0157379_10442316 3300014968 Bacteria 1199
69 Ga0157376_10000003 3300014969 Bacteria 568634
70 Ga0213873_10000003 3300021358 Bacteria 973849
71 Ga0213876_10000003 3300021384 Bacteria 973849
72 Ga0213876_10000009 3300021384 Bacteria 496136
73 Ga0213876_10206752 3300021384 Bacteria 1043
74 Ga0207655_1025784 3300025728 Bacteria 2843
75 Ga0207643_10098300 3300025908 Bacteria 1714
76 Ga0207684_10146863 3300025910 Bacteria 2029
77 Ga0207695_10011655 3300025913 Bacteria 10624
78 Ga0207660_10335432 3300025917 Bacteria 1210
79 Ga0207662_10004093 3300025918 Bacteria 7624
80 Ga0207657_10587846 3300025919 Bacteria 869
81 Ga0207646_10051101 3300025922 Bacteria 3699
82 Ga0207646_10164726 3300025922 Bacteria 2001
83 Ga0207646_10416629 3300025922 Bacteria 1213
84 Ga0207694_10000001 3300025924 Bacteria 4078485
85 Ga0207650_10000115 3300025925 Bacteria 105044
86 Ga0207650_10027402 3300025925 Bacteria 4079
87 Ga0207659_10000008 3300025926 Bacteria 321286
88 Ga0207687_10000002 3300025927 Bacteria 975489
89 Ga0207687_10001199 3300025927 Bacteria 17724
90 Ga0207687_10041392 3300025927 Bacteria 3163
91 Ga0207706_10048596 3300025933 Bacteria 3752
92 Ga0207665_10029976 3300025939 Bacteria 3595
93 Ga0207665_10105001 3300025939 Bacteria 1978
94 Ga0207689_10037696 3300025942 Bacteria 4008
95 Ga0207689_10370328 3300025942 Bacteria 1192
96 Ga0207661_10000006 3300025944 Bacteria 537727
97 Ga0207651_10349715 3300025960 Bacteria 1244
98 Ga0207640_10002130 3300025981 Bacteria 10627
99 Ga0207640_10008591 3300025981 Bacteria 5673
100 Ga0207677_10000127 3300026023 Bacteria 62474
101 Ga0207639_10000020 3300026041 Bacteria 236698
102 Ga0207708_10000007 3300026075 Bacteria 264612
103 Ga0207674_10526866 3300026116 Bacteria 1141
104 Ga0207675_100074275 3300026118 Bacteria 3182
105 Ga0207675_100259958 3300026118 Bacteria 1682
106 Ga0307511_10000862 3300030521 Bacteria 32343
107 Ga0307416_100202287 3300032002 Bacteria 1886
108 Ga0373932_0000356 3300035112 Bacteria 14070
109 Ga0373941_0002677 3300035115 Bacteria 3949
110 Ga0373943_0311590 3300035170 Bacteria 895
111 Ga0436365_0007171 3300039437 Bacteria 91953
112 Ga0436365_0271356 3300039437 Bacteria 1941
113 Ga0436365_0379659 3300039437 Bacteria 116274
114 Ga0436365_1206476 3300039437 Bacteria 2745
115 Ga0436362_0263779 3300039453 Bacteria 319094
116 Ga0451839_1075162 3300041496 Bacteria 3123
117 Ga0451577_0096813 3300042876 Bacteria 2635
118 Ga0451577_0123159 3300042876 Bacteria 2323
119 Ga0453684_0054762 3300044712 Bacteria 5192
120 Ga0466960_0019371 3300044901 Bacteria 2998
121 Ga0495679_003551 3300047446 Bacteria 7455
122 Ga0501073_0013659 3300049589 Bacteria 5908
123 Ga0501080_0015959 3300049742 Bacteria 6928
124 nmdc:mga0n895_49146_c1 3300050512 Bacteria 4131
125 nmdc:mga0rr50_148_c1 3300050513 Bacteria 38704
126 nmdc:mga0rr50_4966_c1 3300050513 Bacteria 7876
127 nmdc:mga0rr50_7020_c1 3300050513 Bacteria 6913
128 nmdc:mga08x19_2883_c1 3300050514 Bacteria 7096
129 Ga0495655_0000080 3300053083 Bacteria 18417

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005444 Ga0070694_100660445 Ga0070694_1006604451 220
2 3300006871 Ga0075434_100022114 Ga0075434_1000221144 221
3 3300007076 Ga0075435_100054590 Ga0075435_1000545902 221
4 3300014968 Ga0157379_10442316 Ga0157379_104423162 221
5 3300050512 nmdc:mga0n895_49146_c1 nmdc:mga0n895_49146_c1_1572_2240 221
6 3300025917 Ga0207660_10335432 Ga0207660_103354322 224
7 3300005457 Ga0070662_100113674 Ga0070662_1001136742 227
8 3300005719 Ga0068861_100101681 Ga0068861_1001016811 227
9 3300025927 Ga0207687_10041392 Ga0207687_100413922 227
10 3300025933 Ga0207706_10048596 Ga0207706_100485963 227
11 3300025960 Ga0207651_10349715 Ga0207651_103497152 227
12 3300026118 Ga0207675_100074275 Ga0207675_1000742752 227
13 3300032002 Ga0307416_100202287 Ga0307416_1002022872 229
14 3300005549 Ga0070704_100077373 Ga0070704_1000773732 232
15 3300005617 Ga0068859_100000004 Ga0068859_10000000465 232
16 3300006931 Ga0097620_100000004 Ga0097620_10000000465 232
17 3300005518 Ga0070699_100098485 Ga0070699_1000984851 237
18 3300006028 Ga0070717_10000048 Ga0070717_1000004870 241
19 3300009093 Ga0105240_10009209 Ga0105240_100092098 242
20 3300025913 Ga0207695_10011655 Ga0207695_100116558 242
21 3300026041 Ga0207639_10000020 Ga0207639_10000020181 242
22 3300005616 Ga0068852_100385301 Ga0068852_1003853012 243
23 3300010375 Ga0105239_10050191 Ga0105239_100501913 243
24 3300025919 Ga0207657_10587846 Ga0207657_105878461 243
25 3300005615 Ga0070702_100114345 Ga0070702_1001143452 244
26 3300006914 Ga0075436_100010758 Ga0075436_1000107586 244
27 3300007076 Ga0075435_100000721 Ga0075435_1000007215 244
28 3300009147 Ga0114129_10090516 Ga0114129_100905162 244
29 3300042876 Ga0451577_0096813 Ga0451577_0096813_1845_2579 244
30 3300050513 nmdc:mga0rr50_148_c1 nmdc:mga0rr50_148_c1_32326_33072 244
31 3300050514 nmdc:mga08x19_2883_c1 nmdc:mga08x19_2883_c1_1520_2266 244
32 3300005467 Ga0070706_100178932 Ga0070706_1001789322 245
33 3300005518 Ga0070699_100359700 Ga0070699_1003597002 245
34 3300009098 Ga0105245_10001214 Ga0105245_100012147 245
35 3300025910 Ga0207684_10146863 Ga0207684_101468632 245
36 3300025922 Ga0207646_10051101 Ga0207646_100511011 245
37 3300025922 Ga0207646_10416629 Ga0207646_104166292 245
38 3300025927 Ga0207687_10001199 Ga0207687_100011996 245
39 3300039437 Ga0436365_0271356 Ga0436365_0271356_221_958 245
40 3300039437 Ga0436365_1206476 Ga0436365_1206476_770_1528 245
41 3300005331 Ga0070670_100013332 Ga0070670_1000133324 246
42 3300006173 Ga0070716_100282109 Ga0070716_1002821092 246
43 3300009098 Ga0105245_10599467 Ga0105245_105994672 246
44 3300025925 Ga0207650_10027402 Ga0207650_100274024 246
45 3300025939 Ga0207665_10029976 Ga0207665_100299762 246
46 3300005438 Ga0070701_10001567 Ga0070701_100015673 247
47 3300005445 Ga0070708_100597390 Ga0070708_1005973902 247
48 3300005466 Ga0070685_10010686 Ga0070685_100106864 247
49 3300005468 Ga0070707_100093002 Ga0070707_1000930023 247
50 3300005471 Ga0070698_100260222 Ga0070698_1002602222 247
51 3300005547 Ga0070693_100071053 Ga0070693_1000710532 247
52 3300005615 Ga0070702_100251665 Ga0070702_1002516652 247
53 3300005719 Ga0068861_100025854 Ga0068861_1000258544 247
54 3300007076 Ga0075435_100026650 Ga0075435_1000266504 247
55 3300007076 Ga0075435_100085079 Ga0075435_1000850792 247
56 3300009176 Ga0105242_10003937 Ga0105242_100039374 247
57 3300013297 Ga0157378_10161577 Ga0157378_101615774 247
58 3300014745 Ga0157377_10000125 Ga0157377_1000012549 247
59 3300025922 Ga0207646_10164726 Ga0207646_101647262 247
60 3300025939 Ga0207665_10105001 Ga0207665_101050012 247
61 3300026116 Ga0207674_10526866 Ga0207674_105268661 247
62 3300026118 Ga0207675_100259958 Ga0207675_1002599582 247
63 3300035115 Ga0373941_0002677 Ga0373941_0002677_463_1215 247
64 3300050513 nmdc:mga0rr50_4966_c1 nmdc:mga0rr50_4966_c1_5776_6528 247
65 3300050513 nmdc:mga0rr50_7020_c1 nmdc:mga0rr50_7020_c1_2104_2859 247
66 3300005329 Ga0070683_100000033 Ga0070683_10000003355 248
67 3300005331 Ga0070670_100000253 Ga0070670_10000025343 248
68 3300005334 Ga0068869_100099354 Ga0068869_1000993541 248
69 3300005338 Ga0068868_100000173 Ga0068868_10000017316 248
70 3300005343 Ga0070687_100016954 Ga0070687_1000169542 248
71 3300005345 Ga0070692_10005036 Ga0070692_100050366 248
72 3300005354 Ga0070675_100000006 Ga0070675_10000000617 248
73 3300005441 Ga0070700_100000158 Ga0070700_10000015810 248
74 3300005445 Ga0070708_100091275 Ga0070708_1000912752 248
75 3300005467 Ga0070706_100131819 Ga0070706_1001318192 248
76 3300005471 Ga0070698_100245340 Ga0070698_1002453402 248
77 3300005535 Ga0070684_100000183 Ga0070684_10000018312 248
78 3300005544 Ga0070686_100110877 Ga0070686_1001108772 248
79 3300005578 Ga0068854_100002833 Ga0068854_1000028334 248
80 3300005578 Ga0068854_100005908 Ga0068854_1000059085 248
81 3300005840 Ga0068870_10111461 Ga0068870_101114612 248
82 3300006844 Ga0075428_100300283 Ga0075428_1003002832 248
83 3300006871 Ga0075434_100395607 Ga0075434_1003956072 248
84 3300009036 Ga0105244_10026322 Ga0105244_100263222 248
85 3300009098 Ga0105245_10000003 Ga0105245_1000000337 248
86 3300009101 Ga0105247_10045909 Ga0105247_100459092 248
87 3300009147 Ga0114129_10218149 Ga0114129_102181492 248
88 3300009147 Ga0114129_11116490 Ga0114129_111164901 248
89 3300009551 Ga0105238_10000002 Ga0105238_10000002648 248
90 3300013105 Ga0157369_10007019 Ga0157369_100070192 248
91 3300013296 Ga0157374_10000005 Ga0157374_10000005425 248
92 3300013297 Ga0157378_10000372 Ga0157378_1000037217 248
93 3300013297 Ga0157378_10000468 Ga0157378_1000046819 248
94 3300013308 Ga0157375_10000009 Ga0157375_10000009335 248
95 3300013308 Ga0157375_10000839 Ga0157375_1000083914 248
96 3300014745 Ga0157377_10000001 Ga0157377_10000001147 248
97 3300014969 Ga0157376_10000003 Ga0157376_10000003354 248
98 3300021358 Ga0213873_10000003 Ga0213873_10000003677 248
99 3300021384 Ga0213876_10000003 Ga0213876_10000003191 248
100 3300021384 Ga0213876_10000009 Ga0213876_10000009344 248
101 3300021384 Ga0213876_10206752 Ga0213876_102067522 248
102 3300025728 Ga0207655_1025784 Ga0207655_10257843 248
103 3300025908 Ga0207643_10098300 Ga0207643_100983002 248
104 3300025918 Ga0207662_10004093 Ga0207662_100040935 248
105 3300025924 Ga0207694_10000001 Ga0207694_10000001646 248
106 3300025925 Ga0207650_10000115 Ga0207650_1000011595 248
107 3300025926 Ga0207659_10000008 Ga0207659_1000000851 248
108 3300025927 Ga0207687_10000002 Ga0207687_1000000237 248
109 3300025942 Ga0207689_10037696 Ga0207689_100376962 248
110 3300025942 Ga0207689_10370328 Ga0207689_103703282 248
111 3300025944 Ga0207661_10000006 Ga0207661_10000006421 248
112 3300025981 Ga0207640_10002130 Ga0207640_100021304 248
113 3300025981 Ga0207640_10008591 Ga0207640_100085914 248
114 3300026023 Ga0207677_10000127 Ga0207677_1000012722 248
115 3300026075 Ga0207708_10000007 Ga0207708_1000000733 248
116 3300030521 Ga0307511_10000862 Ga0307511_100008623 248
117 3300035112 Ga0373932_0000356 Ga0373932_0000356_4706_5470 248
118 3300035170 Ga0373943_0311590 Ga0373943_0311590_95_850 248
119 3300039437 Ga0436365_0007171 Ga0436365_0007171_64955_65713 248
120 3300039437 Ga0436365_0379659 Ga0436365_0379659_71463_72209 248
121 3300039453 Ga0436362_0263779 Ga0436362_0263779_214624_215382 248
122 3300041496 Ga0451839_1075162 Ga0451839_1075162_1928_2680 248
123 3300042876 Ga0451577_0123159 Ga0451577_0123159_1226_1984 248
124 3300044712 Ga0453684_0054762 Ga0453684_0054762_711_1475 248
125 3300044901 Ga0466960_0019371 Ga0466960_0019371_850_1620 248
126 3300047446 Ga0495679_003551 Ga0495679_003551_4789_5541 248
127 3300049589 Ga0501073_0013659 Ga0501073_0013659_4983_5729 248
128 3300049742 Ga0501080_0015959 Ga0501080_0015959_6073_6819 248
129 3300053083 Ga0495655_0000080 Ga0495655_0000080_11333_12103 248

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

24

176

0.96

PF13304

AAA_21

AAA domain, putative AbiEii toxin, Type IV TA system

123

210

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3c41-assembly1.cif.gz_K abc protein artp in complex with amp-pnp/mg2+ 0.952 1 244
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.9474 1 226
4u00-assembly1.cif.gz_A crystal structure of ttha1159 in complex with adp 0.9472 3 244
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.9438 1 225
7ch8-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with adp-v 0.9438 1 242
ID Description Score Start End Superfamily
af_P0AAF6_1_241_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9576 1 242 3.40.50.300
af_P0A9R7_1_220_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.953 4 221 3.40.50.300
af_P0AAF6_1_241_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9499 1 242 3.40.50.300
af_P9WQL5_26_341_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.947 1 242 3.40.50.300
af_P63386_5_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.947 1 244 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A844W1P5-F1-model_v4 deleted 0.9728 4 224
AF-A0A1H0DA45-F1-model_v4 Oleandomycin transport system ATP-binding protein 0.9628 1 225 GO:0005524
GO:0016887
GO:0043215
GO:0046677
GO:1900753
AF-A0A844W1P5-F1-model_v4 deleted 0.9601 4 224
AF-A0A651DPK3-F1-model_v4 Amino acid ABC transporter ATP-binding protein 0.9592 1 247 GO:0005524
GO:0015424
GO:0016887
AF-A0A5C5RD78-F1-model_v4 Amino acid ABC transporter ATP-binding protein 0.9564 1 242 GO:0005524
GO:0005886
GO:0015424
GO:0016887

Feature Viewer

pLDDT pTM Quality
93.92 0.9 High
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Predicted Structure (AlphaFold2)

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