F144282

General Info

Members Datasets Scaffolds Average Seq Length
130 108 260 550

Family's Representative Sequence

Representative Sequence 3300005336|Ga0070680_100074176|Ga0070680_1000741763
Length 587
Sequence MRIDRRKALALLGLGAAAPATQARARGPVSFQHGVASGDPLQDRVILWTRLTTRGSEPVSYRWRLDPLDRKGGGKHGGGVTGPDRDFTVKVDVVNLDPGRAYSFQFEAGGTTSPMGRTATLPEGPTKDAVLAVCTCALYPNGYFNAYGAIARLPRVDAVVHLGDYIYEYGGPGSYGMDSAVAGERPHDPPHECVSLADYRRRHAQYKTDPQLQAAHARAPWIVVWDDHETANDSWMGGAENHQPATEGDWNQRKAAAIKAYYEWMPIREPAGGGFSINRSFDFGDVASLFMLETRLTARDHQLYPDKEMPADPTPAELAAWRQRLADPARKMMSAGQEAWLGRALTASVKAGTPWQVIGNEVIMARLFTPPIHKYMSAEAYAAAKSELSHAGANRLARIEANAALGLPWGADMWDGYPADRQRFYGLVEKARANAIVVSGDSHAFWANELWDAETGGKRVAVEFGAPGITSPGPGESIAAVPLGDAFAKHNREVLFNNQTGKGFVLLTLTHAQATAELMAVSSIKDRAFTTRPIVTYHVTPGASGVSGLRVAQDTHSAHPGEGRDPDGRSRTRVLGARSRTGQPPAL

Samples

Sample ID Description Type Environment
1 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
2 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
3 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
20 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
26 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
29 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
30 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
31 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
33 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
52 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
53 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
54 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
55 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
60 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
61 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
62 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
63 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
64 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
65 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
66 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
67 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
68 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
69 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
70 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
71 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
72 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
73 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
74 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
75 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
76 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
77 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
78 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
79 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
80 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
81 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
82 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
83 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
84 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
85 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
86 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
87 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
88 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
89 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
90 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
91 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
92 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
93 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
94 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
95 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
96 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
97 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
98 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
99 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
100 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
101 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
102 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
103 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
104 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
105 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
106 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
107 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
108 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.31
Metatranscriptomes 0
Isolates 7.69

Biome Distribution

Category Percentage (%)
Aerial Root 0.77
Bulb 0
Endosphere 20.77
Nodule 0
Rhizoplane 1.54
Rhizosphere 63.85
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070680_100074176 3300005336 Bacteria 2799
2 Ga0055530_10001050 3300003791 Bacteria 21918
3 Ga0065165_1010230 3300005262 Bacteria 4086
4 Ga0068868_100086352 3300005338 Bacteria 2522
5 Ga0070668_100000293 3300005347 Bacteria 32901
6 Ga0070673_100059389 3300005364 Bacteria 3027
7 Ga0070659_100091514 3300005366 Bacteria 2438
8 Ga0070681_10021011 3300005458 Bacteria 6540
9 Ga0070665_100000593 3300005548 Bacteria 50386
10 Ga0070664_100066699 3300005564 Bacteria 3074
11 Ga0068856_100093079 3300005614 Bacteria 2999
12 Ga0068864_100000067 3300005618 Bacteria 115834
13 Ga0068863_100000735 3300005841 Bacteria 32827
14 Ga0068863_100118452 3300005841 Bacteria 2524
15 Ga0068858_100000020 3300005842 Bacteria 175896
16 Ga0068860_100000382 3300005843 Bacteria 58081
17 Ga0070717_10016497 3300006028 Bacteria 5727
18 Ga0075368_10001453 3300006042 Bacteria 7577
19 Ga0075364_10000647 3300006051 Bacteria 17958
20 Ga0075364_10001277 3300006051 Bacteria 13547
21 Ga0068865_100006288 3300006881 Bacteria 7232
22 Ga0105250_10007503 3300009092 Bacteria 4681
23 Ga0105240_10000970 3300009093 Bacteria 51122
24 Ga0105240_10068418 3300009093 Bacteria 4397
25 Ga0105248_10015057 3300009177 Bacteria 8517
26 Ga0105248_10108779 3300009177 Bacteria 3126
27 Ga0105238_10010874 3300009551 Bacteria 9146
28 Ga0105238_10013458 3300009551 Bacteria 8258
29 Ga0105239_10263769 3300010375 Bacteria 1936
30 Ga0157373_10001998 3300013100 Bacteria 15466
31 Ga0157373_10002767 3300013100 Bacteria 13268
32 Ga0157375_10012057 3300013308 Bacteria 7656
33 Ga0163163_10051200 3300014325 Bacteria 4072
34 Ga0157379_10018770 3300014968 Bacteria 6097
35 Ga0209026_1000803 3300025250 Bacteria 17062
36 Ga0209758_1000654 3300025297 Bacteria 52302
37 Ga0209050_1000173 3300025298 Bacteria 149800
38 Ga0209050_1017554 3300025298 Bacteria 2842
39 Ga0209256_1000888 3300025299 Bacteria 36832
40 Ga0209257_1000196 3300025304 Bacteria 149656
41 Ga0209257_1000750 3300025304 Bacteria 49020
42 Ga0207705_10093729 3300025909 Bacteria 2201
43 Ga0207707_10013146 3300025912 Bacteria 7213
44 Ga0207695_10000572 3300025913 Bacteria 75360
45 Ga0207695_10033468 3300025913 Bacteria 5604
46 Ga0207695_10039728 3300025913 Bacteria 5054
47 Ga0207694_10160903 3300025924 Bacteria 1813
48 Ga0207690_10016329 3300025932 Bacteria 4514
49 Ga0207704_10039462 3300025938 Bacteria 2749
50 Ga0207711_10006868 3300025941 Bacteria 9557
51 Ga0207711_10087493 3300025941 Bacteria 2733
52 Ga0207679_10046548 3300025945 Bacteria 3145
53 Ga0207651_10071230 3300025960 Bacteria 2463
54 Ga0207668_10001930 3300025972 Bacteria 12135
55 Ga0207658_10126743 3300025986 Bacteria 2045
56 Ga0207703_10000082 3300026035 Bacteria 110579
57 Ga0207641_10000007 3300026088 Bacteria 441443
58 Ga0207676_10000241 3300026095 Bacteria 47707
59 Ga0268266_10000003 3300028379 Bacteria 1701703
60 Ga0268266_10060407 3300028379 Bacteria 3268
61 Ga0268265_10004912 3300028380 Bacteria 9199
62 Ga0268264_10000008 3300028381 Bacteria 773387
63 Ga0307517_10120443 3300028786 Bacteria 1943
64 Ga0307515_10067857 3300028794 Bacteria 4911
65 Ga0307513_10018307 3300031456 Bacteria 8375
66 Ga0307513_10062892 3300031456 Bacteria 3920
67 Ga0307413_10022263 3300031824 Bacteria 3412
68 Ga0395899_0000347 3300037312 Bacteria 57058
69 Ga0395900_0000008 3300037418 Bacteria 480459
70 Ga0395898_0064073 3300037466 Bacteria 3565
71 Ga0395905_0001727 3300037471 Bacteria 25583
72 Ga0395905_0057128 3300037471 Bacteria 3650
73 Ga0395901_0000008 3300038443 Bacteria 495962
74 Ga0451833_0980981 3300041491 Bacteria 18627
75 Ga0495596_0000046 3300046500 Bacteria 89403
76 Ga0495583_0023026 3300046506 Bacteria 3161
77 Ga0495606_0024435 3300046507 Bacteria 4354
78 Ga0495610_0000550 3300046512 Bacteria 37563
79 Ga0495610_0004563 3300046512 Bacteria 10183
80 Ga0495620_0022340 3300046515 Bacteria 3048
81 Ga0495628_0088868 3300046516 Bacteria 2394
82 Ga0495643_0000004 3300046522 Bacteria 519944
83 Ga0495643_0010858 3300046522 Bacteria 5581
84 Ga0495648_0000066 3300046524 Bacteria 140767
85 Ga0495642_0010770 3300046528 Bacteria 3503
86 Ga0495609_0004356 3300046538 Bacteria 7776
87 Ga0495597_0008222 3300046542 Bacteria 5243
88 Ga0495668_0001894 3300046616 Bacteria 18724
89 Ga0495668_0005630 3300046616 Bacteria 8416
90 Ga0495611_0003099 3300046648 Bacteria 7385
91 Ga0495625_0048910 3300046660 Bacteria 3041
92 Ga0495669_0011834 3300046684 Bacteria 3710
93 Ga0495669_0016448 3300046684 Bacteria 3168
94 Ga0495673_0001872 3300047469 Bacteria 15797
95 Ga0495686_0004444 3300047472 Bacteria 11546
96 Ga0495593_0028418 3300047673 Bacteria 3071
97 Ga0496115_0000126 3300048918 Bacteria 69044
98 Ga0496115_0008676 3300048918 Bacteria 7531
99 Ga0496117_0049553 3300048920 Bacteria 2986
100 Ga0496118_0023311 3300048921 Bacteria 5380
101 Ga0496119_0014696 3300048922 Bacteria 6099
102 Ga0496121_0000035 3300048924 Bacteria 374316
103 Ga0496123_0037558 3300048926 Bacteria 3418
104 Ga0501077_0016744 3300049593 Bacteria 4622
105 nmdc:mga00v17_2010_c1 3300050491 Bacteria 10477
106 nmdc:mga00v17_491_c1 3300050491 Bacteria 22189
107 nmdc:mga06z11_9752_c1 3300050494 Bacteria 4058
108 nmdc:mga07m45_3490_c1 3300050496 Bacteria 7581
109 Ga0500635_0000270 3300053080 Bacteria 20001
110 Ga0500644_0000425 3300053088 Bacteria 19776
111 Ga0500644_0013395 3300053088 Bacteria 2290
112 Ga0500555_002722 3300053103 Bacteria 5079
113 Ga0500555_005567 3300053103 Bacteria 3574
114 Ga0500562_001239 3300053108 Bacteria 6287
115 Ga0500607_086758 3300053121 Bacteria 1584
116 Ga0500614_005128 3300053123 Bacteria 2750
117 Ga0500638_009113 3300053162 Bacteria 4273
118 Ga0500636_0023444 3300053177 Bacteria 3649
119 Ga0500637_0017203 3300053178 Bacteria 3867
120 Ga0500645_002812 3300053730 Bacteria 7501
121 2511126027 2510917021 Bacteria 5705459
122 2644087057 2643221614 Bacteria 4260023
123 2644342011 2643221661 Bacteria 4267604
124 2644368298 2643221666 Bacteria 4265935
125 2644458066 2643221681 Bacteria 3707866
126 2644536885 2643221697 Bacteria 3575694
127 2866552292 2866552031 Bacteria 5824618
128 2884960585 2884960567 Bacteria 5437054
129 2984594133 2984592036 Bacteria 3670284
130 8054306785 8054302542 Bacteria 5698134
131 Ga0070680_100074176
132 Ga0055530_10001050
133 Ga0065165_1010230
134 Ga0068868_100086352
135 Ga0070668_100000293
136 Ga0070673_100059389
137 Ga0070659_100091514
138 Ga0070681_10021011
139 Ga0070665_100000593
140 Ga0070664_100066699
141 Ga0068856_100093079
142 Ga0068864_100000067
143 Ga0068863_100000735
144 Ga0068863_100118452
145 Ga0068858_100000020
146 Ga0068860_100000382
147 Ga0070717_10016497
148 Ga0075368_10001453
149 Ga0075364_10000647
150 Ga0075364_10001277
151 Ga0068865_100006288
152 Ga0105250_10007503
153 Ga0105240_10000970
154 Ga0105240_10068418
155 Ga0105248_10015057
156 Ga0105248_10108779
157 Ga0105238_10010874
158 Ga0105238_10013458
159 Ga0105239_10263769
160 Ga0157373_10001998
161 Ga0157373_10002767
162 Ga0157375_10012057
163 Ga0163163_10051200
164 Ga0157379_10018770
165 Ga0209026_1000803
166 Ga0209758_1000654
167 Ga0209050_1000173
168 Ga0209050_1017554
169 Ga0209256_1000888
170 Ga0209257_1000196
171 Ga0209257_1000750
172 Ga0207705_10093729
173 Ga0207707_10013146
174 Ga0207695_10000572
175 Ga0207695_10033468
176 Ga0207695_10039728
177 Ga0207694_10160903
178 Ga0207690_10016329
179 Ga0207704_10039462
180 Ga0207711_10006868
181 Ga0207711_10087493
182 Ga0207679_10046548
183 Ga0207651_10071230
184 Ga0207668_10001930
185 Ga0207658_10126743
186 Ga0207703_10000082
187 Ga0207641_10000007
188 Ga0207676_10000241
189 Ga0268266_10000003
190 Ga0268266_10060407
191 Ga0268265_10004912
192 Ga0268264_10000008
193 Ga0307517_10120443
194 Ga0307515_10067857
195 Ga0307513_10018307
196 Ga0307513_10062892
197 Ga0307413_10022263
198 Ga0395899_0000347
199 Ga0395900_0000008
200 Ga0395898_0064073
201 Ga0395905_0001727
202 Ga0395905_0057128
203 Ga0395901_0000008
204 Ga0451833_0980981
205 Ga0495596_0000046
206 Ga0495583_0023026
207 Ga0495606_0024435
208 Ga0495610_0000550
209 Ga0495610_0004563
210 Ga0495620_0022340
211 Ga0495628_0088868
212 Ga0495643_0000004
213 Ga0495643_0010858
214 Ga0495648_0000066
215 Ga0495642_0010770
216 Ga0495609_0004356
217 Ga0495597_0008222
218 Ga0495668_0001894
219 Ga0495668_0005630
220 Ga0495611_0003099
221 Ga0495625_0048910
222 Ga0495669_0011834
223 Ga0495669_0016448
224 Ga0495673_0001872
225 Ga0495686_0004444
226 Ga0495593_0028418
227 Ga0496115_0000126
228 Ga0496115_0008676
229 Ga0496117_0049553
230 Ga0496118_0023311
231 Ga0496119_0014696
232 Ga0496121_0000035
233 Ga0496123_0037558
234 Ga0501077_0016744
235 nmdc:mga00v17_2010_c1
236 nmdc:mga00v17_491_c1
237 nmdc:mga06z11_9752_c1
238 nmdc:mga07m45_3490_c1
239 Ga0500635_0000270
240 Ga0500644_0000425
241 Ga0500644_0013395
242 Ga0500555_002722
243 Ga0500555_005567
244 Ga0500562_001239
245 Ga0500607_086758
246 Ga0500614_005128
247 Ga0500638_009113
248 Ga0500636_0023444
249 Ga0500637_0017203
250 Ga0500645_002812
251 2511126027
252 2644087057
253 2644342011
254 2644368298
255 2644458066
256 2644536885
257 2866552292
258 2884960585
259 2984594133
260 8054306785

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09423

PhoD

PhoD-like phosphatase

131

518

0.93

PF16655

PhoD_N

PhoD-like phosphatase, N-terminal domain

33

120

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yeq-assembly1.cif.gz_A structure of phod 0.8778 32 552
2yeq-assembly1.cif.gz_A structure of phod 0.8064 32 552
7cg1-assembly1.cif.gz_A solution structure of the sensor domain of the anti-sigma factor rsgi4 in pseudobacteroides cellulosolvens 0.7854 36 125
4n68-assembly1.cif.gz_A crystal structure of an internal fn3 domain from human contactin-5 [psi-nysgrc-005804] 0.7808 36 126
7cg8-assembly1.cif.gz_C structure of the sensor domain (short construct) of the anti-sigma factor rsgi4 in pseudobacteroides cellulosolvens 0.7689 29 125
ID Description Score Start End Superfamily
2yeqB01 Mainly Beta;Sandwich;Immunoglobulin-like;Purple acid phosphatase-like, N-terminal 0.91 32 126 2.60.40.380
2yeqA02 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Alkaline phosphatase D (PhoD) 0.8705 125 552 3.60.21.70
4bq9B01 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8458 35 125 2.60.40.10
af_X1WHE3_1930_2017_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8157 35 120 2.60.40.10
af_O73878_441_529_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7987 35 125 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A3B9GZ17-F1-model_v4 Alkaline phosphatase 0.965 427 552
AF-A0A519KZV6-F1-model_v4 Alkaline phosphatase 0.959 461 552
AF-A0A258KPI3-F1-model_v4 PhoD-like phosphatase metallophosphatase domain-containing protein 0.9569 166 552
AF-A0A519K6Z5-F1-model_v4 Alkaline phosphatase 0.9562 284 552
AF-A0A2W4URH2-F1-model_v4 Alkaline phosphatase 0.9556 96 290

Map