F146162
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 130 | 83 | 260 | 161 |
Family's Representative Sequence
| Representative Sequence | 3300033180|Ga0307510_10088266|Ga0307510_100882662 |
| Length | 188 |
| Sequence | MIGNDVVDLIQSRHESNWQRKGFIEKLFTAEEQLLIKHDSNPEIMVWLLWSMKEAAYKIYNRQTKLRQYIPKKLICNIVSNNNNCITGQVTCCENVYHTKTTIFTDSIHTIAVSFLHDLNNVIEIENTGIIKDQYGIPYLNTLQNRIKDVSITHHGRFEKVVTIIKKNNRQNQQDSVLDNIKFHCTNL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 2 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 3 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 4 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 5 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 6 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 7 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 8 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 9 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 10 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 11 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 12 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 13 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 14 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 15 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 16 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 17 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 18 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 19 | 3300015682 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 | Metagenome | Rhizosphere |
| 20 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 21 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 22 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 23 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 24 | 3300030744 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 | Metagenome | Rhizosphere |
| 25 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 26 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 27 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 28 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 29 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 30 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 31 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 32 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 33 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 34 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 35 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 36 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 37 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 38 | 3300041453 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG | Metagenome | Rhizoplane |
| 39 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 40 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 41 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 42 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 43 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 44 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 45 | 3300049664 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought | Metagenome | Rhizosphere |
| 46 | 3300049671 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought | Metagenome | Rhizosphere |
| 47 | 3300049679 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought | Metagenome | Rhizosphere |
| 48 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 49 | 3300049763 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control | Metagenome | Rhizosphere |
| 50 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 51 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 52 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 53 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 54 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 55 | 3300053147 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere | Metagenome | Endosphere |
| 56 | 3300053726 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere | Metagenome | Endosphere |
| 57 | 2513020052 | Flavobacterium sp. CF136 | Isolate | Rhizosphere |
| 58 | 2585427687 | Pedobacter borealis DSM 19626 | Isolate | Rhizosphere |
| 59 | 2643221667 | Flavobacterium sp. Root420 | Isolate | Unclassified |
| 60 | 2643221716 | Flavobacterium sp. Root901 | Isolate | Unclassified |
| 61 | 2643221725 | Flavobacterium sp. Root935 | Isolate | Unclassified |
| 62 | 2738541279 | Flavobacterium sp. GV069 | Isolate | Unclassified |
| 63 | 2738541284 | Pedobacter sp. YR016 | Isolate | Unclassified |
| 64 | 2738541285 | Flavobacterium sp. GV030 | Isolate | Unclassified |
| 65 | 2738543007 | Flavobacterium sp. GV063 | Isolate | Unclassified |
| 66 | 2739367651 | Pedobacter sp. OK291 | Isolate | Unclassified |
| 67 | 2739367857 | Flavobacterium sp. GV029 | Isolate | Unclassified |
| 68 | 2739367858 | Flavobacterium sp. GV028 | Isolate | Unclassified |
| 69 | 2775506987 | Pedobacter ginsengisoli T01R-27 | Isolate | Unclassified |
| 70 | 2802428842 | Flavobacterium sp. S87F.05.LMB.W.Kidney.N | Isolate | Unclassified |
| 71 | 2842722452 | Pedobacter sp. R-72249 | Isolate | Unclassified |
| 72 | 2849281842 | Pedobacter sp. AK013 | Isolate | Rhizosphere |
| 73 | 2857613821 | Flavobacterium sp. R-72247 | Isolate | Unclassified |
| 74 | 2857618242 | Flavobacterium sp. R-74482 | Isolate | Unclassified |
| 75 | 2904419702 | Flavobacterium sp. 1355 | Isolate | Rhizosphere |
| 76 | 2904555929 | Flavobacterium sp. 1750 | Isolate | Rhizosphere |
| 77 | 2919683626 | Flavobacterium piscis 4129 | Isolate | Unclassified |
| 78 | 2929150217 | Flavobacterium sp. R-74510 Hybrid assembly | Isolate | Unclassified |
| 79 | 2945997725 | Pedobacter sp. W3I1 | Isolate | Rhizosphere |
| 80 | 2954016120 | Flavobacterium sp. W4I14 | Isolate | Rhizosphere |
| 81 | 2977268062 | Flavobacterium sp. SORGH_AS 622 | Isolate | Unclassified |
| 82 | 8055419101 | Flavobacterium tyrosinilyticum KCTC 42726 | Isolate | Rhizosphere |
| 83 | 8055592153 | Flavobacterium panacis DCY106 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 79.23 |
| Metatranscriptomes | 0 |
| Isolates | 20.77 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.92 |
| Nodule | 1.54 |
| Rhizoplane | 0.77 |
| Rhizosphere | 73.08 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.54 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0307510_10088266 | 3300033180 | Bacteria | 2961 |
| 2 | SwRhRL2b_contig_1463173 | 2162886007 | Bacteria | 8874 |
| 3 | SwRhRL2b_contig_204006 | 2162886007 | Bacteria | 919 |
| 4 | rootH1_10368997 | 3300003323 | Bacteria | 1922 |
| 5 | Ga0065714_10002785 | 3300005288 | Bacteria | 18311 |
| 6 | Ga0065714_10004953 | 3300005288 | Bacteria | 10985 |
| 7 | Ga0065714_10007238 | 3300005288 | Bacteria | 7198 |
| 8 | Ga0065714_10011419 | 3300005288 | Bacteria | 2929 |
| 9 | Ga0065714_10015211 | 3300005288 | Bacteria | 1832 |
| 10 | Ga0065704_10000251 | 3300005289 | Bacteria | 69899 |
| 11 | Ga0065704_10076259 | 3300005289 | Bacteria | 5200 |
| 12 | Ga0065704_10186540 | 3300005289 | Unclassified | 1210 |
| 13 | Ga0070682_100059842 | 3300005337 | Bacteria | 2407 |
| 14 | Ga0068852_100465901 | 3300005616 | Bacteria | 1253 |
| 15 | Ga0079104_1000139 | 3300006946 | Bacteria | 102950 |
| 16 | Ga0105251_10331469 | 3300009011 | Bacteria | 692 |
| 17 | Ga0105250_10099562 | 3300009092 | Bacteria | 1186 |
| 18 | Ga0157373_10000296 | 3300013100 | Bacteria | 40219 |
| 19 | Ga0157373_10009418 | 3300013100 | Bacteria | 7213 |
| 20 | Ga0157373_10047978 | 3300013100 | Bacteria | 3045 |
| 21 | Ga0157373_10208804 | 3300013100 | Bacteria | 1377 |
| 22 | Ga0157373_10916057 | 3300013100 | Bacteria | 651 |
| 23 | Ga0157371_10000041 | 3300013102 | Bacteria | 203957 |
| 24 | Ga0157371_10000697 | 3300013102 | Bacteria | 39526 |
| 25 | Ga0157371_10001043 | 3300013102 | Bacteria | 30400 |
| 26 | Ga0157371_10006115 | 3300013102 | Bacteria | 10007 |
| 27 | Ga0157370_10000043 | 3300013104 | Bacteria | 132770 |
| 28 | Ga0157370_10000195 | 3300013104 | Bacteria | 76072 |
| 29 | Ga0157370_10001249 | 3300013104 | Bacteria | 31757 |
| 30 | Ga0157370_10027674 | 3300013104 | Bacteria | 5589 |
| 31 | Ga0157370_10243174 | 3300013104 | Bacteria | 1665 |
| 32 | Ga0157370_10270095 | 3300013104 | Bacteria | 1571 |
| 33 | Ga0157369_10000016 | 3300013105 | Bacteria | 257827 |
| 34 | Ga0157369_10001214 | 3300013105 | Bacteria | 32084 |
| 35 | Ga0163162_10000813 | 3300013306 | Bacteria | 28949 |
| 36 | Ga0163162_10052413 | 3300013306 | Bacteria | 4098 |
| 37 | Ga0182008_10000010 | 3300014497 | Bacteria | 301527 |
| 38 | Ga0182006_1001062 | 3300015261 | Bacteria | 17672 |
| 39 | Ga0182006_1003953 | 3300015261 | Bacteria | 7413 |
| 40 | Ga0182006_1021660 | 3300015261 | Bacteria | 2678 |
| 41 | Ga0182007_10000002 | 3300015262 | Bacteria | 564661 |
| 42 | Ga0183373_1004 | 3300015682 | Bacteria | 537398 |
| 43 | Ga0163161_10000026 | 3300017792 | Bacteria | 199745 |
| 44 | Ga0163161_10000593 | 3300017792 | Bacteria | 29004 |
| 45 | Ga0163161_10001199 | 3300017792 | Bacteria | 19518 |
| 46 | Ga0207696_1100898 | 3300025711 | Bacteria | 786 |
| 47 | Ga0209281_1000351 | 3300027111 | Bacteria | 75878 |
| 48 | Ga0307515_10415375 | 3300028794 | Bacteria | 967 |
| 49 | Ga0316181_1080040 | 3300030744 | Bacteria | 3114 |
| 50 | Ga0307513_10230754 | 3300031456 | Bacteria | 1664 |
| 51 | Ga0307408_100007659 | 3300031548 | Bacteria | 7142 |
| 52 | Ga0307405_10000006 | 3300031731 | Bacteria | 361477 |
| 53 | Ga0307413_10000748 | 3300031824 | Bacteria | 11212 |
| 54 | Ga0307410_10000028 | 3300031852 | Bacteria | 50901 |
| 55 | Ga0307406_10000153 | 3300031901 | Bacteria | 41029 |
| 56 | Ga0307407_10000003 | 3300031903 | Bacteria | 271723 |
| 57 | Ga0307407_10613491 | 3300031903 | Bacteria | 811 |
| 58 | Ga0307412_10000009 | 3300031911 | Bacteria | 445987 |
| 59 | Ga0307409_100004918 | 3300031995 | Bacteria | 7605 |
| 60 | Ga0307416_100000002 | 3300032002 | Bacteria | 509907 |
| 61 | Ga0307414_10000002 | 3300032004 | Bacteria | 623006 |
| 62 | Ga0307414_10004727 | 3300032004 | Bacteria | 7430 |
| 63 | Ga0307414_10012369 | 3300032004 | Bacteria | 5043 |
| 64 | Ga0307414_10015600 | 3300032004 | Bacteria | 4588 |
| 65 | Ga0307414_10050485 | 3300032004 | Bacteria | 2882 |
| 66 | Ga0307414_10050737 | 3300032004 | Bacteria | 2876 |
| 67 | Ga0307414_10154153 | 3300032004 | Bacteria | 1816 |
| 68 | Ga0307414_10183728 | 3300032004 | Bacteria | 1684 |
| 69 | Ga0307414_10634613 | 3300032004 | Bacteria | 961 |
| 70 | Ga0307414_10803153 | 3300032004 | Bacteria | 858 |
| 71 | Ga0307414_10910770 | 3300032004 | Bacteria | 806 |
| 72 | Ga0307414_11113228 | 3300032004 | Bacteria | 729 |
| 73 | Ga0307411_10000001 | 3300032005 | Bacteria | 931810 |
| 74 | Ga0307411_10862684 | 3300032005 | Unclassified | 802 |
| 75 | Ga0439466_0000701 | 3300041411 | Bacteria | 12658 |
| 76 | Ga0451797_1186905 | 3300041453 | Bacteria | 866 |
| 77 | Ga0495627_097957 | 3300046453 | Bacteria | 839 |
| 78 | Ga0495606_0033346 | 3300046507 | Bacteria | 3552 |
| 79 | Ga0495606_0248447 | 3300046507 | Bacteria | 988 |
| 80 | Ga0495616_0128896 | 3300046513 | Bacteria | 1161 |
| 81 | Ga0495643_0000970 | 3300046522 | Bacteria | 29411 |
| 82 | Ga0495625_0061141 | 3300046660 | Bacteria | 2666 |
| 83 | Ga0496121_0017736 | 3300048924 | Bacteria | 7243 |
| 84 | Ga0501224_028949 | 3300049664 | Bacteria | 829 |
| 85 | Ga0501238_000148 | 3300049671 | Bacteria | 10810 |
| 86 | Ga0501249_000004 | 3300049679 | Bacteria | 226777 |
| 87 | Ga0501249_029630 | 3300049679 | Bacteria | 1217 |
| 88 | Ga0501249_047387 | 3300049679 | Bacteria | 983 |
| 89 | Ga0501241_003317 | 3300049758 | Bacteria | 3043 |
| 90 | Ga0501241_005986 | 3300049758 | Bacteria | 2255 |
| 91 | Ga0501241_007610 | 3300049758 | Bacteria | 1984 |
| 92 | Ga0501241_032183 | 3300049758 | Bacteria | 994 |
| 93 | Ga0501266_000014 | 3300049763 | Bacteria | 181600 |
| 94 | Ga0501266_002966 | 3300049763 | Bacteria | 2114 |
| 95 | Ga0500644_0087167 | 3300053088 | Bacteria | 1161 |
| 96 | Ga0500651_0000528 | 3300053093 | Bacteria | 19528 |
| 97 | Ga0500641_0000007 | 3300053096 | Bacteria | 206510 |
| 98 | Ga0500641_0000051 | 3300053096 | Bacteria | 53081 |
| 99 | Ga0500641_0000366 | 3300053096 | Bacteria | 16777 |
| 100 | Ga0500658_0000003 | 3300053134 | Bacteria | 512506 |
| 101 | Ga0500559_0119613 | 3300053136 | Bacteria | 1224 |
| 102 | Ga0500589_134841 | 3300053147 | Bacteria | 1026 |
| 103 | Ga0500584_003408 | 3300053726 | Bacteria | 6292 |
| 104 | 2513233553 | 2513020052 | Bacteria | 5120511 |
| 105 | 2586207758 | 2585427687 | Bacteria | 5544917 |
| 106 | 2644372776 | 2643221667 | Bacteria | 5627472 |
| 107 | 2644644397 | 2643221716 | Bacteria | 4986332 |
| 108 | 2644682854 | 2643221725 | Bacteria | 5087956 |
| 109 | 2738732234 | 2738541279 | Bacteria | 6149495 |
| 110 | 2738760694 | 2738541284 | Bacteria | 5199923 |
| 111 | 2738764799 | 2738541285 | Bacteria | 6150075 |
| 112 | 2739213814 | 2738543007 | Bacteria | 6149845 |
| 113 | 2739588006 | 2739367651 | Bacteria | 6359826 |
| 114 | 2740001952 | 2739367857 | Bacteria | 5433684 |
| 115 | 2740006768 | 2739367858 | Bacteria | 5432813 |
| 116 | 2776612897 | 2775506987 | Bacteria | 5373360 |
| 117 | 2802654531 | 2802428842 | Bacteria | 4926114 |
| 118 | 2842724215 | 2842722452 | Bacteria | 6263924 |
| 119 | 2849282527 | 2849281842 | Bacteria | 6065644 |
| 120 | 2857617440 | 2857613821 | Bacteria | 4917088 |
| 121 | 2857618862 | 2857618242 | Bacteria | 5635925 |
| 122 | 2904420645 | 2904419702 | Bacteria | 5166287 |
| 123 | 2904560040 | 2904555929 | Bacteria | 5218588 |
| 124 | 2919686703 | 2919683626 | Bacteria | 5534354 |
| 125 | 2929152313 | 2929150217 | Bacteria | 5462483 |
| 126 | 2945998961 | 2945997725 | Bacteria | 6404843 |
| 127 | 2954021413 | 2954016120 | Bacteria | 6446024 |
| 128 | 2977270550 | 2977268062 | Bacteria | 5243061 |
| 129 | 8055423746 | 8055419101 | Bacteria | 5289643 |
| 130 | 8055592839 | 8055592153 | Bacteria | 5961247 |
| 131 | Ga0307510_10088266 | |||
| 132 | SwRhRL2b_contig_1463173 | |||
| 133 | SwRhRL2b_contig_204006 | |||
| 134 | rootH1_10368997 | |||
| 135 | Ga0065714_10002785 | |||
| 136 | Ga0065714_10004953 | |||
| 137 | Ga0065714_10007238 | |||
| 138 | Ga0065714_10011419 | |||
| 139 | Ga0065714_10015211 | |||
| 140 | Ga0065704_10000251 | |||
| 141 | Ga0065704_10076259 | |||
| 142 | Ga0065704_10186540 | |||
| 143 | Ga0070682_100059842 | |||
| 144 | Ga0068852_100465901 | |||
| 145 | Ga0079104_1000139 | |||
| 146 | Ga0105251_10331469 | |||
| 147 | Ga0105250_10099562 | |||
| 148 | Ga0157373_10000296 | |||
| 149 | Ga0157373_10009418 | |||
| 150 | Ga0157373_10047978 | |||
| 151 | Ga0157373_10208804 | |||
| 152 | Ga0157373_10916057 | |||
| 153 | Ga0157371_10000041 | |||
| 154 | Ga0157371_10000697 | |||
| 155 | Ga0157371_10001043 | |||
| 156 | Ga0157371_10006115 | |||
| 157 | Ga0157370_10000043 | |||
| 158 | Ga0157370_10000195 | |||
| 159 | Ga0157370_10001249 | |||
| 160 | Ga0157370_10027674 | |||
| 161 | Ga0157370_10243174 | |||
| 162 | Ga0157370_10270095 | |||
| 163 | Ga0157369_10000016 | |||
| 164 | Ga0157369_10001214 | |||
| 165 | Ga0163162_10000813 | |||
| 166 | Ga0163162_10052413 | |||
| 167 | Ga0182008_10000010 | |||
| 168 | Ga0182006_1001062 | |||
| 169 | Ga0182006_1003953 | |||
| 170 | Ga0182006_1021660 | |||
| 171 | Ga0182007_10000002 | |||
| 172 | Ga0183373_1004 | |||
| 173 | Ga0163161_10000026 | |||
| 174 | Ga0163161_10000593 | |||
| 175 | Ga0163161_10001199 | |||
| 176 | Ga0207696_1100898 | |||
| 177 | Ga0209281_1000351 | |||
| 178 | Ga0307515_10415375 | |||
| 179 | Ga0316181_1080040 | |||
| 180 | Ga0307513_10230754 | |||
| 181 | Ga0307408_100007659 | |||
| 182 | Ga0307405_10000006 | |||
| 183 | Ga0307413_10000748 | |||
| 184 | Ga0307410_10000028 | |||
| 185 | Ga0307406_10000153 | |||
| 186 | Ga0307407_10000003 | |||
| 187 | Ga0307407_10613491 | |||
| 188 | Ga0307412_10000009 | |||
| 189 | Ga0307409_100004918 | |||
| 190 | Ga0307416_100000002 | |||
| 191 | Ga0307414_10000002 | |||
| 192 | Ga0307414_10004727 | |||
| 193 | Ga0307414_10012369 | |||
| 194 | Ga0307414_10015600 | |||
| 195 | Ga0307414_10050485 | |||
| 196 | Ga0307414_10050737 | |||
| 197 | Ga0307414_10154153 | |||
| 198 | Ga0307414_10183728 | |||
| 199 | Ga0307414_10634613 | |||
| 200 | Ga0307414_10803153 | |||
| 201 | Ga0307414_10910770 | |||
| 202 | Ga0307414_11113228 | |||
| 203 | Ga0307411_10000001 | |||
| 204 | Ga0307411_10862684 | |||
| 205 | Ga0439466_0000701 | |||
| 206 | Ga0451797_1186905 | |||
| 207 | Ga0495627_097957 | |||
| 208 | Ga0495606_0033346 | |||
| 209 | Ga0495606_0248447 | |||
| 210 | Ga0495616_0128896 | |||
| 211 | Ga0495643_0000970 | |||
| 212 | Ga0495625_0061141 | |||
| 213 | Ga0496121_0017736 | |||
| 214 | Ga0501224_028949 | |||
| 215 | Ga0501238_000148 | |||
| 216 | Ga0501249_000004 | |||
| 217 | Ga0501249_029630 | |||
| 218 | Ga0501249_047387 | |||
| 219 | Ga0501241_003317 | |||
| 220 | Ga0501241_005986 | |||
| 221 | Ga0501241_007610 | |||
| 222 | Ga0501241_032183 | |||
| 223 | Ga0501266_000014 | |||
| 224 | Ga0501266_002966 | |||
| 225 | Ga0500644_0087167 | |||
| 226 | Ga0500651_0000528 | |||
| 227 | Ga0500641_0000007 | |||
| 228 | Ga0500641_0000051 | |||
| 229 | Ga0500641_0000366 | |||
| 230 | Ga0500658_0000003 | |||
| 231 | Ga0500559_0119613 | |||
| 232 | Ga0500589_134841 | |||
| 233 | Ga0500584_003408 | |||
| 234 | 2513233553 | |||
| 235 | 2586207758 | |||
| 236 | 2644372776 | |||
| 237 | 2644644397 | |||
| 238 | 2644682854 | |||
| 239 | 2738732234 | |||
| 240 | 2738760694 | |||
| 241 | 2738764799 | |||
| 242 | 2739213814 | |||
| 243 | 2739588006 | |||
| 244 | 2740001952 | |||
| 245 | 2740006768 | |||
| 246 | 2776612897 | |||
| 247 | 2802654531 | |||
| 248 | 2842724215 | |||
| 249 | 2849282527 | |||
| 250 | 2857617440 | |||
| 251 | 2857618862 | |||
| 252 | 2904420645 | |||
| 253 | 2904560040 | |||
| 254 | 2919686703 | |||
| 255 | 2929152313 | |||
| 256 | 2945998961 | |||
| 257 | 2954021413 | |||
| 258 | 2977270550 | |||
| 259 | 8055423746 | |||
| 260 | 8055592839 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1zvp-assembly1.cif.gz_A | crystal structure of a protein of unknown function vc0802 from vibrio cholerae, possible transport protein | 0.7754 | 107 | 138 |
| 1zvp-assembly2.cif.gz_B | crystal structure of a protein of unknown function vc0802 from vibrio cholerae, possible transport protein | 0.7732 | 107 | 138 |
| 3s6g-assembly1.cif.gz_A | crystal structures of seleno-substituted mutant mmnags in space group p212121 | 0.6815 | 103 | 138 |
| 2was-assembly2.cif.gz_F | structure of the fungal type i fas ppt domain | 0.507 | 14 | 137 |
| 2wat-assembly2.cif.gz_F | structure of the fungal type i fas ppt domain in complex with coa | 0.5029 | 14 | 137 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1zvpB00 | Alpha Beta;2-Layer Sandwich;VC0802-like;VC0802-like | 0.7732 | 107 | 138 | 3.30.2130.10 |
| af_Q23353_103_173_3.90.1150.10 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.556 | 102 | 138 | 3.90.1150.10 |
| 5cmoC00 | Alpha Beta;Alpha-Beta Complex;Ribosomal Protein L22; Chain A;4'-phosphopantetheinyl transferase domain | 0.4805 | 7 | 137 | 3.90.470.20 |
| 4fxgC01 | Mainly Beta;Sandwich;Immunoglobulin-like;Alpha-macroglobulin, receptor-binding domain | 0.4693 | 107 | 138 | 2.60.40.690 |
| af_Q8BZ10_44_151_3.30.70.960 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;SEA domain | 0.4512 | 24 | 106 | 3.30.70.960 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A520I712-F1-model_v4 | 4'-phosphopantetheinyl transferase superfamily protein | 0.8983 | 1 | 52 |
GO:0000287
GO:0008897 |
| AF-A0A520I712-F1-model_v4 | 4'-phosphopantetheinyl transferase superfamily protein | 0.8664 | 1 | 52 |
GO:0000287
GO:0008897 |
| AF-A0A4Q3UAR7-F1-model_v4 | 4-phosphopantetheinyl transferase family protein | 0.7076 | 7 | 137 |
GO:0000287
GO:0008897 |
| AF-A0A519V7L0-F1-model_v4 | 4-phosphopantetheinyl transferase family protein | 0.6129 | 7 | 137 |
GO:0000287
GO:0008897 |
| AF-A0A354DAD8-F1-model_v4 | deleted | 0.6087 | 1 | 135 |
|