F149236

General Info

Members Datasets Scaffolds Average Seq Length
131 113 262 288

Family's Representative Sequence

Representative Sequence 3300013306|Ga0163162_10041567|Ga0163162_100415674
Length 310
Sequence MYLVRSFSWVSAPPERNVMTLLVTGASGHLGRLVVEALLERGTPAADVVATARTPESIADLADRGVQVRRADYTDPASLDAAFSGVDRLLLVSGSAVGQRVAQHANVIDAAARAGVGFVAYTSITRADTSDLVLAAEHRATEELLAASELPHALLRNSWYLENYTGQLPTFLEHGAVIGAAGEGRVSAATRADFADAVAVVLAGQGGVEHEGAVYELGGDEAFTLGELAETVGRVAGREIVYTDLPVADYTAALVAAGLPEGYAAVLADGDRGLAAGALFTDSGDLSRLTGRPTTGLEDALRAALVAHPA

Samples

Sample ID Description Type Environment
1 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
35 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
50 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
52 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
53 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
57 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
58 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
59 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
60 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
61 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
62 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
65 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
66 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
67 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
68 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
71 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
72 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
73 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
74 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
75 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
76 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
77 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
78 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
79 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
80 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
81 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
82 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
83 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
84 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
85 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
86 3300049529 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
87 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
96 2643221576 Nocardioides sp. Root614 Isolate Unclassified
97 2643221590 Nocardioides sp. Root682 Isolate Unclassified
98 2643221711 Terrabacter sp. Root85 Isolate Unclassified
99 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
100 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
101 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
102 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
103 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
104 2858868258 Micromonospora sp. MH33 Isolate Unclassified
105 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
106 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
107 2902582711 Micromonospora sp. AP08 Isolate Unclassified
108 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
109 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
110 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
111 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
112 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
113 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83.21
Metatranscriptomes 2.29
Isolates 14.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.76
Nodule 0.76
Rhizoplane 9.16
Rhizosphere 77.86
Stem 0
Stem Tuber 0
Unclassified 1.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163162_10041567 3300013306 Bacteria 4601
2 LJQas_1000386 3300000549 Bacteria 7446
3 JGI24735J21928_10066850 3300002067 Bacteria 1031
4 JGI25406J46586_10002875 3300003203 Bacteria 8114
5 JGI25406J46586_10005956 3300003203 Bacteria 5642
6 rootH2_10041607 3300003320 Bacteria 11882
7 Ga0006562J51391_1107116 3300003578 Bacteria 1570
8 Ga0070658_10547478 3300005327 Bacteria 1001
9 Ga0070683_100041826 3300005329 Bacteria 4218
10 Ga0068869_100038048 3300005334 Bacteria 3425
11 Ga0070680_100299214 3300005336 Bacteria 1364
12 Ga0068868_100175364 3300005338 Bacteria 1776
13 Ga0070687_100068893 3300005343 Bacteria 1893
14 Ga0070661_100534902 3300005344 Bacteria 941
15 Ga0070692_10043313 3300005345 Bacteria 2314
16 Ga0070668_100085197 3300005347 Bacteria 2483
17 Ga0070669_100378540 3300005353 Bacteria 1154
18 Ga0070659_100006842 3300005366 Bacteria 8259
19 Ga0070700_100061281 3300005441 Bacteria 2373
20 Ga0070662_100091841 3300005457 Bacteria 2281
21 Ga0070706_100085360 3300005467 Bacteria 2925
22 Ga0070707_100098105 3300005468 Bacteria 2838
23 Ga0070699_100000764 3300005518 Bacteria 29736
24 Ga0070697_100031726 3300005536 Bacteria 4251
25 Ga0070664_100028814 3300005564 Bacteria 4624
26 Ga0068857_100008879 3300005577 Bacteria 8704
27 Ga0068857_100166126 3300005577 Bacteria 2004
28 Ga0068860_100170967 3300005843 Bacteria 2099
29 Ga0068862_100080834 3300005844 Bacteria 2819
30 Ga0081539_10000135 3300005985 Bacteria 172789
31 Ga0081539_10000538 3300005985 Bacteria 78469
32 Ga0081539_10008971 3300005985 Bacteria 8512
33 Ga0075365_10128914 3300006038 Bacteria 1749
34 Ga0075432_10004156 3300006058 Bacteria 4935
35 Ga0075429_100200569 3300006880 Bacteria 1748
36 Ga0111539_10101260 3300009094 Bacteria 3382
37 Ga0105245_10005555 3300009098 Bacteria 11076
38 Ga0157377_10004262 3300014745 Bacteria 6555
39 Ga0207684_10047517 3300025910 Bacteria 3640
40 Ga0207662_10086297 3300025918 Bacteria 1923
41 Ga0207646_10354234 3300025922 Bacteria 1326
42 Ga0207681_10110980 3300025923 Bacteria 1995
43 Ga0207687_10016046 3300025927 Bacteria 4916
44 Ga0207700_10082976 3300025928 Bacteria 2508
45 Ga0207700_10097386 3300025928 Bacteria 2338
46 Ga0207664_10024887 3300025929 Bacteria 4501
47 Ga0207690_10266817 3300025932 Bacteria 1328
48 Ga0207706_10028370 3300025933 Bacteria 4999
49 Ga0207689_10028762 3300025942 Bacteria 4648
50 Ga0207661_10038580 3300025944 Bacteria 3745
51 Ga0207661_10137882 3300025944 Bacteria 2097
52 Ga0207679_10063464 3300025945 Bacteria 2757
53 Ga0207679_10198513 3300025945 Bacteria 1674
54 Ga0207668_10138696 3300025972 Bacteria 1867
55 Ga0207674_10020791 3300026116 Bacteria 7084
56 Ga0207674_10258325 3300026116 Bacteria 1689
57 Ga0207428_10018381 3300027907 Bacteria 5973
58 Ga0207428_10210399 3300027907 Bacteria 1461
59 Ga0268265_10141901 3300028380 Bacteria 2012
60 Ga0307413_10056147 3300031824 Bacteria 2400
61 Ga0307410_10113079 3300031852 Bacteria 1967
62 Ga0307410_10173709 3300031852 Bacteria 1626
63 Ga0307412_10170765 3300031911 Bacteria 1626
64 Ga0307409_100051205 3300031995 Bacteria 3159
65 Ga0307416_100012544 3300032002 Bacteria 5715
66 Ga0307416_100381368 3300032002 Bacteria 1440
67 Ga0307415_100004980 3300032126 Bacteria 6989
68 Ga0307415_100062117 3300032126 Bacteria 2589
69 Ga0373955_0173583 3300035172 Bacteria 1277
70 Ga0316584_0087065 3300036712 Bacteria 2338
71 Ga0395899_0116484 3300037312 Bacteria 1917
72 Ga0395900_0036941 3300037418 Bacteria 5035
73 Ga0395900_0177867 3300037418 Unclassified 2164
74 Ga0395898_0016239 3300037466 Bacteria 7621
75 Ga0395905_0001295 3300037471 Bacteria 30741
76 Ga0395905_0123625 3300037471 Unclassified 2433
77 Ga0395901_0078656 3300038443 Bacteria 3443
78 Ga0439465_0047647 3300041413 Bacteria 1398
79 Ga0451577_0536918 3300042876 Bacteria 1062
80 Ga0466972_0018450 3300044658 Bacteria 3488
81 Ga0466965_0000003 3300044683 Bacteria 265985
82 Ga0466960_0013798 3300044901 Bacteria 3442
83 Ga0451576_0119986 3300045051 Bacteria 2738
84 Ga0495603_0098827 3300046455 Bacteria 1704
85 Ga0495582_0035877 3300046473 Bacteria 2728
86 Ga0495599_0128699 3300046678 Bacteria 1573
87 Ga0495686_0158316 3300047472 Bacteria 1325
88 Ga0496100_0457160 3300048903 Bacteria 979
89 Ga0496101_0002560 3300048904 Bacteria 11159
90 Ga0496102_0008383 3300048905 Bacteria 8852
91 Ga0496103_0006394 3300048906 Bacteria 7040
92 Ga0496105_0011518 3300048908 Bacteria 6990
93 Ga0496105_0193862 3300048908 Bacteria 1660
94 Ga0496110_0022301 3300048913 Bacteria 5375
95 Ga0496111_0080005 3300048914 Bacteria 2384
96 Ga0496113_0007306 3300048916 Bacteria 7092
97 Ga0496113_0181534 3300048916 Bacteria 1668
98 Ga0496114_0004741 3300048917 Bacteria 10585
99 Ga0496114_0023319 3300048917 Bacteria 5049
100 Ga0496120_0060139 3300048923 Bacteria 2126
101 Ga0496124_0000400 3300048927 Bacteria 79176
102 Ga0501312_025609 3300049528 Bacteria 900
103 Ga0501313_010490 3300049529 Bacteria 1056
104 Ga0501034_0035526 3300049571 Bacteria 5052
105 Ga0501034_0314314 3300049571 Bacteria 1500
106 Ga0501036_0006588 3300049572 Bacteria 9433
107 Ga0501038_0030214 3300049574 Bacteria 4797
108 Ga0501039_0347478 3300049575 Bacteria 1166
109 Ga0501043_0026546 3300049579 Bacteria 4544
110 Ga0501035_0076729 3300049822 Bacteria 2954
111 Ga0501044_0014651 3300049823 Bacteria 8455
112 nmdc:mga08y16_9987_c1 3300050511 Bacteria 9961
113 2623586392 2622736626 Bacteria 7181580
114 2643891236 2643221576 Bacteria 5214352
115 2643960284 2643221590 Bacteria 5214697
116 2644610745 2643221711 Bacteria 4865335
117 2739235802 2738543011 Bacteria 5731169
118 2812375825 2811994882 Bacteria 4688362
119 2819667061 2818991458 Bacteria 4794049
120 2831940268 2831935698 Bacteria 5963223
121 2844844885 2844841374 Bacteria 3917147
122 2858874009 2858868258 Bacteria 7683772
123 2858905604 2858902515 Bacteria 7086037
124 2889305400 2889300758 Bacteria 5690814
125 2902586435 2902582711 Bacteria 6187705
126 2939746742 2939743619 Bacteria 5762299
127 2990049554 2990044586 Bacteria 6603797
128 2996224755 2996221748 Bacteria 6799777
129 8025537213 8025530807 Bacteria 8495698
130 8054476968 8054472261 Bacteria 7464355
131 8055414013 8055412473 Bacteria 6257500
132 Ga0163162_10041567
133 LJQas_1000386
134 JGI24735J21928_10066850
135 JGI25406J46586_10002875
136 JGI25406J46586_10005956
137 rootH2_10041607
138 Ga0006562J51391_1107116
139 Ga0070658_10547478
140 Ga0070683_100041826
141 Ga0068869_100038048
142 Ga0070680_100299214
143 Ga0068868_100175364
144 Ga0070687_100068893
145 Ga0070661_100534902
146 Ga0070692_10043313
147 Ga0070668_100085197
148 Ga0070669_100378540
149 Ga0070659_100006842
150 Ga0070700_100061281
151 Ga0070662_100091841
152 Ga0070706_100085360
153 Ga0070707_100098105
154 Ga0070699_100000764
155 Ga0070697_100031726
156 Ga0070664_100028814
157 Ga0068857_100008879
158 Ga0068857_100166126
159 Ga0068860_100170967
160 Ga0068862_100080834
161 Ga0081539_10000135
162 Ga0081539_10000538
163 Ga0081539_10008971
164 Ga0075365_10128914
165 Ga0075432_10004156
166 Ga0075429_100200569
167 Ga0111539_10101260
168 Ga0105245_10005555
169 Ga0157377_10004262
170 Ga0207684_10047517
171 Ga0207662_10086297
172 Ga0207646_10354234
173 Ga0207681_10110980
174 Ga0207687_10016046
175 Ga0207700_10082976
176 Ga0207700_10097386
177 Ga0207664_10024887
178 Ga0207690_10266817
179 Ga0207706_10028370
180 Ga0207689_10028762
181 Ga0207661_10038580
182 Ga0207661_10137882
183 Ga0207679_10063464
184 Ga0207679_10198513
185 Ga0207668_10138696
186 Ga0207674_10020791
187 Ga0207674_10258325
188 Ga0207428_10018381
189 Ga0207428_10210399
190 Ga0268265_10141901
191 Ga0307413_10056147
192 Ga0307410_10113079
193 Ga0307410_10173709
194 Ga0307412_10170765
195 Ga0307409_100051205
196 Ga0307416_100012544
197 Ga0307416_100381368
198 Ga0307415_100004980
199 Ga0307415_100062117
200 Ga0373955_0173583
201 Ga0316584_0087065
202 Ga0395899_0116484
203 Ga0395900_0036941
204 Ga0395900_0177867
205 Ga0395898_0016239
206 Ga0395905_0001295
207 Ga0395905_0123625
208 Ga0395901_0078656
209 Ga0439465_0047647
210 Ga0451577_0536918
211 Ga0466972_0018450
212 Ga0466965_0000003
213 Ga0466960_0013798
214 Ga0451576_0119986
215 Ga0495603_0098827
216 Ga0495582_0035877
217 Ga0495599_0128699
218 Ga0495686_0158316
219 Ga0496100_0457160
220 Ga0496101_0002560
221 Ga0496102_0008383
222 Ga0496103_0006394
223 Ga0496105_0011518
224 Ga0496105_0193862
225 Ga0496110_0022301
226 Ga0496111_0080005
227 Ga0496113_0007306
228 Ga0496113_0181534
229 Ga0496114_0004741
230 Ga0496114_0023319
231 Ga0496120_0060139
232 Ga0496124_0000400
233 Ga0501312_025609
234 Ga0501313_010490
235 Ga0501034_0035526
236 Ga0501034_0314314
237 Ga0501036_0006588
238 Ga0501038_0030214
239 Ga0501039_0347478
240 Ga0501043_0026546
241 Ga0501035_0076729
242 Ga0501044_0014651
243 nmdc:mga08y16_9987_c1
244 2623586392
245 2643891236
246 2643960284
247 2644610745
248 2739235802
249 2812375825
250 2819667061
251 2831940268
252 2844844885
253 2858874009
254 2858905604
255 2889305400
256 2902586435
257 2939746742
258 2990049554
259 2996224755
260 8025537213
261 8054476968
262 8055414013

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08659

KR

KR domain

19

112

0.88

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

21

135

0.86

PF05368

NmrA

NmrA-like family

21

244

0.8

PF13460

NAD_binding_10

NAD(P)H-binding

25

205

0.79

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

22

158

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zcv-assembly1.cif.gz_A crystal structure of nadph-dependent quinone oxidoreductase qor2 complexed with nadph from escherichia coli 0.9773 2 280
2zcu-assembly1.cif.gz_A crystal structure of a new type of nadph-dependent quinone oxidoreductase (qor2) from escherichia coli 0.9608 2 280
2zcv-assembly1.cif.gz_A crystal structure of nadph-dependent quinone oxidoreductase qor2 complexed with nadph from escherichia coli 0.957 2 280
2vrb-assembly1.cif.gz_A-2 crystal structure of the citrobacter sp. triphenylmethane reductase complexed with nadp(h) 0.9441 2 283
2zcu-assembly1.cif.gz_A crystal structure of a new type of nadph-dependent quinone oxidoreductase (qor2) from escherichia coli 0.9405 2 280
ID Description Score Start End Superfamily
af_P39315_2_136_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9834 4 138 3.40.50.720
af_P39315_1_278_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9833 2 280 3.40.50.2300
af_P39315_1_278_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9799 2 280 3.40.50.2300
2zcvA02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9769 139 280 3.90.25.10
af_P39315_137_283_3.90.25.10 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9748 139 280 3.90.25.10
ID Description Score Start End GO Terms
AF-A0A2A2WP04-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9892 1 283
AF-A0A1C3N6L0-F1-model_v4 NAD(P)H dehydrogenase (Quinone) 0.9882 1 283
AF-A0A495SUU7-F1-model_v4 NAD(P)H dehydrogenase (Quinone) 0.9881 1 283
AF-A0A429A1T3-F1-model_v4 deleted 0.9863 138 283
AF-A0A838D458-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9854 131 283

Map