F149671

General Info

Members Datasets Scaffolds Average Seq Length
131 78 131 448

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10029863|Ga0265338_100298632
Length 481
Sequence MAMNSLRHFTKSARLLLLLPIACVVLGFGATLVNAADAGASLEQRVARLEQASPQIAPAINTGDNAWMLASCALVLMMTAPGLILFYGGLVRSKNVLSTMMHSLILMAVVSTLWMLFGYSMAFAPGNAFVGNPLTYFLLKDVGGAPNTDYSATVPSETFMLFQMMFAIITPALISGAVAERIKFKAYVLFTVLWVTVVYFPLCHMVWGKGGYFNWMTMGSKIPVLDFAGGTVVHISSGVSALVCALVLGRRSGYPQEPMMPHNVVLSLVGAGLLWVGWFGFNAGSALNAGTLATSAFAATHFSAAAAALSWAVTEWLHKGRPSVLGAASGMVAGLATVTPASGFVSVPAAFCIGLAAGVVCYFAVTKLKARFAYDDSLDVFGVHAVGSMTGMLMLGFLASAVVNPAIASTFHANGVAVSLAGGTGQFFNQAIGVIFTAVFAGVASFIILKLVDKLVGLRVHVEDEDAGLDLTQHGERAYTE

Samples

Sample ID Description Type Environment
1 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
2 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
3 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
4 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
5 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
6 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
7 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
8 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
9 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
10 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
11 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
12 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
13 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
14 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
15 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
23 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
24 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
25 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
26 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
27 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
28 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
29 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
30 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
31 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
32 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
33 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
34 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
35 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
36 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
37 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
38 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
39 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
40 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
41 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
42 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
43 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
44 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
45 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
46 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
47 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
48 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
49 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
50 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
51 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
52 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
53 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
54 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
55 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
56 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
57 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
58 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
59 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
60 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
61 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
62 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
63 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
64 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
65 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
66 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
67 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
68 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
69 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
70 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
71 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
72 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
73 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
78 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.76
Nodule 0
Rhizoplane 0.76
Rhizosphere 97.71
Stem 0
Stem Tuber 0
Unclassified 0.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070691_10014612 3300005341 Bacteria 3603
2 Ga0070711_100155815 3300005439 Bacteria 1727
3 Ga0070681_10130428 3300005458 Bacteria 2446
4 Ga0068855_100010976 3300005563 Bacteria 10930
5 Ga0068856_100000017 3300005614 Bacteria 154589
6 Ga0068856_100115463 3300005614 Bacteria 2684
7 Ga0068856_100116060 3300005614 Bacteria 2677
8 Ga0068859_100017812 3300005617 Bacteria 7141
9 Ga0068858_100001646 3300005842 Bacteria 22815
10 Ga0075430_100089218 3300006846 Bacteria 2580
11 Ga0075431_100107798 3300006847 Bacteria 2874
12 Ga0097620_100017812 3300006931 Bacteria 7141
13 Ga0105240_10016892 3300009093 Bacteria 9864
14 Ga0105240_10090775 3300009093 Bacteria 3733
15 Ga0105238_10017501 3300009551 Bacteria 7287
16 Ga0105238_10036044 3300009551 Bacteria 5028
17 Ga0157374_10052608 3300013296 Bacteria 3793
18 Ga0163163_10072534 3300014325 Bacteria 3433
19 Ga0207707_10117724 3300025912 Bacteria 2322
20 Ga0207695_10188561 3300025913 Bacteria 1980
21 Ga0207663_10130251 3300025916 Bacteria 1737
22 Ga0207694_10004563 3300025924 Bacteria 10798
23 Ga0207664_10028504 3300025929 Bacteria 4244
24 Ga0207703_10004128 3300026035 Bacteria 11986
25 Ga0207702_10000630 3300026078 Bacteria 38742
26 Ga0207702_10166236 3300026078 Bacteria 2018
27 Ga0265337_1000147 3300028556 Bacteria 35245
28 Ga0265337_1000662 3300028556 Bacteria 18144
29 Ga0265337_1009684 3300028556 Bacteria 3424
30 Ga0265337_1030496 3300028556 Bacteria 1606
31 Ga0265319_1000003 3300028563 Bacteria 340561
32 Ga0265319_1007100 3300028563 Bacteria 5082
33 Ga0265319_1007883 3300028563 Bacteria 4732
34 Ga0265318_10027652 3300028577 Bacteria 2227
35 Ga0265323_10000461 3300028653 Bacteria 23032
36 Ga0265323_10008595 3300028653 Bacteria 4206
37 Ga0265336_10000289 3300028666 Bacteria 34559
38 Ga0265336_10004730 3300028666 Bacteria 5103
39 Ga0265336_10012433 3300028666 Bacteria 2865
40 Ga0265336_10014572 3300028666 Bacteria 2602
41 Ga0265338_10000025 3300028800 Bacteria 296972
42 Ga0265338_10000050 3300028800 Bacteria 213659
43 Ga0265338_10000088 3300028800 Bacteria 174641
44 Ga0265338_10000282 3300028800 Bacteria 91694
45 Ga0265338_10000399 3300028800 Bacteria 77917
46 Ga0265338_10001793 3300028800 Bacteria 33791
47 Ga0265338_10001952 3300028800 Bacteria 32165
48 Ga0265338_10002940 3300028800 Bacteria 24710
49 Ga0265338_10004733 3300028800 Bacteria 18206
50 Ga0265338_10006018 3300028800 Bacteria 15584
51 Ga0265338_10006557 3300028800 Bacteria 14777
52 Ga0265338_10009937 3300028800 Bacteria 11248
53 Ga0265338_10028202 3300028800 Bacteria 5605
54 Ga0265338_10029863 3300028800 Bacteria 5393
55 Ga0265338_10065999 3300028800 Bacteria 3135
56 Ga0265338_10110905 3300028800 Bacteria 2210
57 Ga0265324_10000119 3300029957 Bacteria 62736
58 Ga0265324_10000170 3300029957 Bacteria 50529
59 Ga0265324_10020533 3300029957 Bacteria 2372
60 Ga0265324_10023645 3300029957 Bacteria 2188
61 Ga0265324_10036209 3300029957 Bacteria 1716
62 Ga0265330_10033218 3300031235 Bacteria 2309
63 Ga0265320_10004024 3300031240 Bacteria 9659
64 Ga0265320_10010300 3300031240 Bacteria 5575
65 Ga0265320_10037120 3300031240 Bacteria 2456
66 Ga0265329_10002718 3300031242 Bacteria 7939
67 Ga0265340_10000209 3300031247 Bacteria 29637
68 Ga0265340_10003102 3300031247 Bacteria 9425
69 Ga0265339_10016681 3300031249 Bacteria 4370
70 Ga0265339_10042786 3300031249 Bacteria 2507
71 Ga0265339_10080073 3300031249 Bacteria 1728
72 Ga0265327_10017624 3300031251 Bacteria 4469
73 Ga0265316_10001936 3300031344 Bacteria 21743
74 Ga0265316_10027577 3300031344 Bacteria 4700
75 Ga0265316_10037612 3300031344 Bacteria 3905
76 Ga0265316_10065673 3300031344 Bacteria 2810
77 Ga0265316_10132516 3300031344 Bacteria 1876
78 Ga0265313_10003416 3300031595 Bacteria 12863
79 Ga0265314_10000148 3300031711 Bacteria 105207
80 Ga0265314_10024898 3300031711 Bacteria 4527
81 Ga0265342_10026208 3300031712 Bacteria 3656
82 Ga0373930_0000899 3300034816 Bacteria 4256
83 Ga0373959_0018998 3300034820 Bacteria 1298
84 Ga0373928_0000009 3300035084 Bacteria 32800
85 Ga0373944_0000064 3300035089 Bacteria 17746
86 Ga0373949_0004122 3300035090 Bacteria 3361
87 Ga0373951_0000614 3300035091 Bacteria 9802
88 Ga0373932_0000001 3300035112 Bacteria 1459067
89 Ga0373945_0065955 3300035116 Bacteria 1360
90 Ga0373954_0007967 3300035118 Bacteria 4641
91 Ga0373954_0014987 3300035118 Bacteria 3461
92 Ga0373956_0004477 3300035119 Bacteria 5587
93 Ga0373956_0027434 3300035119 Bacteria 2472
94 Ga0373962_0000056 3300035242 Bacteria 24939
95 Ga0373931_0000002 3300035691 Bacteria 599830
96 Ga0373935_0047181 3300035692 Bacteria 2723
97 Ga0373933_0026569 3300035724 Bacteria 3326
98 Ga0373937_0000659 3300036401 Bacteria 30219
99 Ga0373937_0017153 3300036401 Bacteria 6444
100 Ga0373937_0098521 3300036401 Bacteria 2711
101 Ga0373925_0000121 3300037068 Bacteria 84624
102 Ga0373925_0010145 3300037068 Bacteria 6839
103 Ga0436364_0411470 3300037853 Bacteria 4664
104 Ga0451577_0001340 3300042876 Bacteria 33403
105 Ga0451577_0063227 3300042876 Bacteria 3301
106 Ga0453684_0000893 3300044712 Bacteria 99593
107 Ga0451576_0108880 3300045051 Bacteria 2883
108 Ga0495592_0019663 3300046454 Bacteria 5137
109 Ga0495653_0159883 3300046463 Bacteria 1565
110 Ga0495618_0000575 3300046514 Bacteria 26127
111 Ga0495652_0131989 3300046529 Bacteria 1976
112 Ga0495665_0095787 3300046531 Bacteria 1559
113 Ga0495640_0097756 3300046533 Bacteria 1930
114 Ga0495586_0000553 3300046535 Bacteria 21702
115 Ga0495667_0029437 3300046559 Bacteria 3697
116 Ga0495667_0137807 3300046559 Bacteria 1573
117 Ga0495634_0099232 3300046642 Bacteria 1883
118 Ga0495647_0058973 3300046681 Bacteria 1510
119 Ga0495613_0000632 3300046689 Bacteria 28018
120 Ga0495680_0001937 3300047322 Bacteria 21766
121 Ga0495684_0045791 3300047471 Bacteria 3347
122 Ga0496115_0040977 3300048918 Bacteria 3683
123 Ga0501031_0000084 3300049568 Bacteria 50157
124 Ga0501032_0000573 3300049569 Bacteria 29789
125 Ga0501033_0001493 3300049570 Bacteria 20721
126 Ga0501033_0045144 3300049570 Bacteria 3280
127 Ga0501033_0104543 3300049570 Bacteria 2064
128 Ga0501035_0002585 3300049822 Bacteria 17680
129 Ga0501035_0026989 3300049822 Bacteria 5251
130 Ga0501044_0002482 3300049823 Bacteria 21042
131 Ga0500650_0017742 3300053098 Bacteria 3076

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046559 Ga0495667_0137807 Ga0495667_0137807_137_1351 381
2 3300034820 Ga0373959_0018998 Ga0373959_0018998_10_1206 382
3 3300035116 Ga0373945_0065955 Ga0373945_0065955_20_1234 388
4 3300046531 Ga0495665_0095787 Ga0495665_0095787_11_1246 391
5 3300029957 Ga0265324_10020533 Ga0265324_100205332 401
6 3300005614 Ga0068856_100115463 Ga0068856_1001154632 408
7 3300013296 Ga0157374_10052608 Ga0157374_100526082 409
8 3300014325 Ga0163163_10072534 Ga0163163_100725343 409
9 3300005563 Ga0068855_100010976 Ga0068855_1000109765 411
10 3300005842 Ga0068858_100001646 Ga0068858_1000016467 412
11 3300026035 Ga0207703_10004128 Ga0207703_100041284 412
12 3300028563 Ga0265319_1000003 Ga0265319_1000003135 412
13 3300031240 Ga0265320_10010300 Ga0265320_100103003 412
14 3300036401 Ga0373937_0017153 Ga0373937_0017153_511_1839 412
15 3300037853 Ga0436364_0411470 Ga0436364_0411470_2715_4079 414
16 3300026078 Ga0207702_10166236 Ga0207702_101662362 418
17 3300046681 Ga0495647_0058973 Ga0495647_0058973_47_1357 419
18 3300029957 Ga0265324_10023645 Ga0265324_100236452 420
19 3300045051 Ga0451576_0108880 Ga0451576_0108880_161_1489 420
20 3300046533 Ga0495640_0097756 Ga0495640_0097756_130_1428 420
21 3300046642 Ga0495634_0099232 Ga0495634_0099232_94_1392 420
22 3300028800 Ga0265338_10000282 Ga0265338_1000028270 422
23 3300029957 Ga0265324_10000119 Ga0265324_1000011920 422
24 3300028800 Ga0265338_10000025 Ga0265338_10000025118 425
25 3300035692 Ga0373935_0047181 Ga0373935_0047181_844_2211 425
26 3300046463 Ga0495653_0159883 Ga0495653_0159883_32_1429 426
27 3300046529 Ga0495652_0131989 Ga0495652_0131989_290_1687 426
28 3300047471 Ga0495684_0045791 Ga0495684_0045791_97_1494 426
29 3300029957 Ga0265324_10036209 Ga0265324_100362092 428
30 3300037068 Ga0373925_0010145 Ga0373925_0010145_4186_5511 429
31 3300005617 Ga0068859_100017812 Ga0068859_1000178126 430
32 3300006931 Ga0097620_100017812 Ga0097620_1000178126 430
33 3300009551 Ga0105238_10017501 Ga0105238_100175014 431
34 3300025924 Ga0207694_10004563 Ga0207694_100045637 431
35 3300029957 Ga0265324_10000170 Ga0265324_1000017021 432
36 3300049570 Ga0501033_0045144 Ga0501033_0045144_865_2280 434
37 3300031251 Ga0265327_10017624 Ga0265327_100176242 435
38 3300028577 Ga0265318_10027652 Ga0265318_100276521 436
39 3300028800 Ga0265338_10028202 Ga0265338_100282022 436
40 3300031249 Ga0265339_10016681 Ga0265339_100166812 436
41 3300035118 Ga0373954_0007967 Ga0373954_0007967_986_2353 437
42 3300035119 Ga0373956_0004477 Ga0373956_0004477_3594_4961 437
43 3300035724 Ga0373933_0026569 Ga0373933_0026569_1044_2411 437
44 3300036401 Ga0373937_0000659 Ga0373937_0000659_20267_21634 437
45 3300046514 Ga0495618_0000575 Ga0495618_0000575_22326_23693 437
46 3300046535 Ga0495586_0000553 Ga0495586_0000553_734_2101 437
47 3300046559 Ga0495667_0029437 Ga0495667_0029437_573_1940 437
48 3300046689 Ga0495613_0000632 Ga0495613_0000632_25918_27285 437
49 3300047322 Ga0495680_0001937 Ga0495680_0001937_2214_3581 437
50 3300028800 Ga0265338_10110905 Ga0265338_101109052 438
51 3300028556 Ga0265337_1030496 Ga0265337_10304961 439
52 3300028666 Ga0265336_10012433 Ga0265336_100124332 439
53 3300049570 Ga0501033_0104543 Ga0501033_0104543_506_1921 439
54 3300049822 Ga0501035_0026989 Ga0501035_0026989_819_2234 439
55 3300009551 Ga0105238_10036044 Ga0105238_100360442 440
56 3300028666 Ga0265336_10004730 Ga0265336_100047303 440
57 3300005439 Ga0070711_100155815 Ga0070711_1001558152 441
58 3300025916 Ga0207663_10130251 Ga0207663_101302511 441
59 3300005614 Ga0068856_100116060 Ga0068856_1001160602 442
60 3300028556 Ga0265337_1000662 Ga0265337_100066219 442
61 3300028666 Ga0265336_10014572 Ga0265336_100145723 442
62 3300028800 Ga0265338_10006557 Ga0265338_1000655711 442
63 3300035118 Ga0373954_0014987 Ga0373954_0014987_1035_2432 442
64 3300035119 Ga0373956_0027434 Ga0373956_0027434_248_1645 442
65 3300036401 Ga0373937_0098521 Ga0373937_0098521_311_1708 442
66 3300046454 Ga0495592_0019663 Ga0495592_0019663_3255_4652 442
67 3300028556 Ga0265337_1009684 Ga0265337_10096843 444
68 3300028800 Ga0265338_10000088 Ga0265338_1000008878 444
69 3300031240 Ga0265320_10004024 Ga0265320_1000402410 444
70 3300053098 Ga0500650_0017742 Ga0500650_0017742_845_2224 444
71 3300005458 Ga0070681_10130428 Ga0070681_101304283 445
72 3300006846 Ga0075430_100089218 Ga0075430_1000892183 445
73 3300006847 Ga0075431_100107798 Ga0075431_1001077983 445
74 3300025912 Ga0207707_10117724 Ga0207707_101177243 445
75 3300025913 Ga0207695_10188561 Ga0207695_101885611 445
76 3300028800 Ga0265338_10006018 Ga0265338_100060183 446
77 3300028800 Ga0265338_10009937 Ga0265338_100099372 446
78 3300031242 Ga0265329_10002718 Ga0265329_100027185 446
79 3300031249 Ga0265339_10042786 Ga0265339_100427862 446
80 3300031344 Ga0265316_10065673 Ga0265316_100656734 446
81 3300031595 Ga0265313_10003416 Ga0265313_1000341615 446
82 3300031711 Ga0265314_10000148 Ga0265314_1000014830 446
83 3300031712 Ga0265342_10026208 Ga0265342_100262082 446
84 3300028556 Ga0265337_1000147 Ga0265337_100014722 447
85 3300028666 Ga0265336_10000289 Ga0265336_1000028914 447
86 3300028800 Ga0265338_10000399 Ga0265338_1000039955 447
87 3300028800 Ga0265338_10065999 Ga0265338_100659992 447
88 3300031240 Ga0265320_10037120 Ga0265320_100371202 447
89 3300028653 Ga0265323_10000461 Ga0265323_1000046116 450
90 3300028800 Ga0265338_10000050 Ga0265338_1000005025 450
91 3300031344 Ga0265316_10037612 Ga0265316_100376123 450
92 3300034816 Ga0373930_0000899 Ga0373930_0000899_2500_3927 450
93 3300035084 Ga0373928_0000009 Ga0373928_0000009_19829_21256 450
94 3300035089 Ga0373944_0000064 Ga0373944_0000064_12570_13997 450
95 3300035090 Ga0373949_0004122 Ga0373949_0004122_1859_3286 450
96 3300035091 Ga0373951_0000614 Ga0373951_0000614_3833_5260 450
97 3300035112 Ga0373932_0000001 Ga0373932_0000001_1395562_1396989 450
98 3300035242 Ga0373962_0000056 Ga0373962_0000056_10841_12268 450
99 3300035691 Ga0373931_0000002 Ga0373931_0000002_98409_99836 450
100 3300037068 Ga0373925_0000121 Ga0373925_0000121_32169_33596 450
101 3300005614 Ga0068856_100000017 Ga0068856_10000001755 451
102 3300026078 Ga0207702_10000630 Ga0207702_1000063025 451
103 3300028800 Ga0265338_10001952 Ga0265338_1000195222 451
104 3300031249 Ga0265339_10080073 Ga0265339_100800732 451
105 3300044712 Ga0453684_0000893 Ga0453684_0000893_73331_74734 451
106 3300031711 Ga0265314_10024898 Ga0265314_100248982 452
107 3300028800 Ga0265338_10001793 Ga0265338_1000179324 453
108 3300028563 Ga0265319_1007883 Ga0265319_10078834 454
109 3300031247 Ga0265340_10000209 Ga0265340_1000020925 454
110 3300042876 Ga0451577_0001340 Ga0451577_0001340_28505_29914 454
111 3300049568 Ga0501031_0000084 Ga0501031_0000084_39503_40918 454
112 3300049569 Ga0501032_0000573 Ga0501032_0000573_25199_26614 454
113 3300049570 Ga0501033_0001493 Ga0501033_0001493_5913_7328 454
114 3300049822 Ga0501035_0002585 Ga0501035_0002585_9143_10558 454
115 3300049823 Ga0501044_0002482 Ga0501044_0002482_6244_7659 454
116 3300025929 Ga0207664_10028504 Ga0207664_100285042 458
117 3300028800 Ga0265338_10004733 Ga0265338_100047335 458
118 3300031344 Ga0265316_10027577 Ga0265316_100275772 458
119 3300031344 Ga0265316_10132516 Ga0265316_101325161 458
120 3300042876 Ga0451577_0063227 Ga0451577_0063227_1295_2710 458
121 3300009093 Ga0105240_10090775 Ga0105240_100907753 459
122 3300028563 Ga0265319_1007100 Ga0265319_10071004 459
123 3300028653 Ga0265323_10008595 Ga0265323_100085952 459
124 3300028800 Ga0265338_10002940 Ga0265338_100029406 459
125 3300031235 Ga0265330_10033218 Ga0265330_100332183 459
126 3300031344 Ga0265316_10001936 Ga0265316_1000193610 459
127 3300005341 Ga0070691_10014612 Ga0070691_100146122 460
128 3300009093 Ga0105240_10016892 Ga0105240_100168923 460
129 3300028800 Ga0265338_10029863 Ga0265338_100298632 460
130 3300031247 Ga0265340_10003102 Ga0265340_1000310212 460
131 3300048918 Ga0496115_0040977 Ga0496115_0040977_924_2342 460

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00909

Ammonium_transp

Ammonium Transporter Family

66

479

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3c1h-assembly1.cif.gz_A substrate binding, deprotonation and selectivity at the periplasmic entrance of the e. coli ammonia channel amtb 0.9078 56 440
2npg-assembly1.cif.gz_A an unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance 0.9037 56 440
6b21-assembly1.cif.gz_A crystal structure of amtb from e. coli bound to topfluor cardiolipin 0.9037 56 439
2npj-assembly1.cif.gz_A an unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance 0.9034 56 440
2npe-assembly1.cif.gz_A an unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance 0.903 56 440
ID Description Score Start End Superfamily
af_Q2FWL9_1_414_1.10.3430.10 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.9069 53 454 1.10.3430.10
2npdA00 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.9027 56 440 1.10.3430.10
af_Q9US00_22_473_1.10.3430.10 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.8973 53 454 1.10.3430.10
2b2hA00 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.8885 54 458 1.10.3430.10
af_Q9P7F3_31_463_1.10.3430.10 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.8872 55 440 1.10.3430.10
ID Description Score Start End GO Terms
AF-A0A522YD66-F1-model_v4 Ammonium transporter 0.9653 53 200 GO:0005886
GO:0008519
AF-A0A7Z7YS46-F1-model_v4 Ammonium transporter 0.9625 278 386 GO:0005886
GO:0008519
AF-A0A855HLC2-F1-model_v4 deleted 0.9491 280 384
AF-A0A380H119-F1-model_v4 Probabale ammonium transporter 0.9487 53 206 GO:0005886
GO:0008519
AF-A0A522YD66-F1-model_v4 Ammonium transporter 0.9463 53 200 GO:0005886
GO:0008519

Feature Viewer

pLDDT pTM Quality
80.35 0.81 High
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Predicted Structure (AlphaFold2)

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