F156705

General Info

Members Datasets Scaffolds Average Seq Length
133 74 132 400

Family's Representative Sequence

Representative Sequence 3300028654|Ga0265322_10000047|Ga0265322_1000004747
Length 427
Sequence MHSGTNKGQMISALETTFLGVKESFFMALGALRTNKLRSALTLLGIAVGVFSIIGVMTAMGVILNSIEGGMSMLGSNTIQIQKYPMFEAGDPQDQAQLRNRKDITYEQGLRLKERASLASAVGMFAFSNNGVVVSCRGEKTNPNISLSGRDIEGFSANNWSIGEGRLYTLEELASAKHVAVLGADVVKKVFPKSDPLGQKVRVDGREFEVIGVVQSRGQMMGQGDNFVVIPINTFFDIYGKNQQVSIKVVAPTQSALADCIEQARGILRTVRHVAPGDADDFYIWSNDSLITQFNDFTKYFQLGVLLVSAIALLAAGVGIMNIMLVSVTERTREIGIRKAIGARKNNILTQFVLEAIVISEFGGIIGILSGLFGGNLVALYMEIPPVIPVQWVMIGFISCSVVGIVFGVYPAWKASNLDPIESLRYE

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
16 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
17 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
19 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
20 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
21 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
22 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
23 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
31 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
32 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
33 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
34 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
35 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
36 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
37 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
40 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
41 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
42 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
43 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
44 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
45 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
46 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
47 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
48 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
49 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
50 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
51 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
52 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
53 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
54 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
55 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
56 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
57 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
67 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
68 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
69 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
71 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
72 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
73 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
74 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0
Isolates 0.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.75
Nodule 0
Rhizoplane 0
Rhizosphere 96.24
Stem 0
Stem Tuber 0
Unclassified 3.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10147557 3300003320 Bacteria 3303
2 Ga0070683_100036576 3300005329 Bacteria 4493
3 Ga0070682_100000113 3300005337 Bacteria 71584
4 Ga0068868_100001479 3300005338 Bacteria 16205
5 Ga0070689_100163079 3300005340 Bacteria 1803
6 Ga0070687_100059948 3300005343 Bacteria 2006
7 Ga0070675_100000018 3300005354 Bacteria 178025
8 Ga0070708_100083605 3300005445 Bacteria 2894
9 Ga0070698_100046721 3300005471 Bacteria 4427
10 Ga0070684_100050527 3300005535 Bacteria 3612
11 Ga0070702_100006203 3300005615 Bacteria 5641
12 Ga0070717_10000029 3300006028 Bacteria 143008
13 Ga0070717_10000097 3300006028 Bacteria 67987
14 Ga0075428_100273052 3300006844 Bacteria 1819
15 Ga0075435_100146845 3300007076 Bacteria 1981
16 Ga0105244_10028243 3300009036 Bacteria 3012
17 Ga0111539_10000351 3300009094 Bacteria 56783
18 Ga0105245_10000006 3300009098 Bacteria 330960
19 Ga0105242_10030888 3300009176 Unclassified 4278
20 Ga0105239_10040865 3300010375 Bacteria 5082
21 Ga0163163_10127702 3300014325 Bacteria 2581
22 Ga0157377_10000072 3300014745 Bacteria 78456
23 Ga0207646_10064950 3300025922 Bacteria 3258
24 Ga0207659_10000025 3300025926 Bacteria 139965
25 Ga0207687_10000006 3300025927 Bacteria 641680
26 Ga0207700_10009560 3300025928 Bacteria 6068
27 Ga0207661_10163361 3300025944 Bacteria 1933
28 Ga0207677_10000215 3300026023 Bacteria 45951
29 Ga0207674_10033853 3300026116 Bacteria 5346
30 Ga0207428_10000028 3300027907 Bacteria 242204
31 Ga0265337_1001874 3300028556 Bacteria 10027
32 Ga0265337_1007577 3300028556 Bacteria 4049
33 Ga0265319_1000211 3300028563 Bacteria 44129
34 Ga0265319_1006707 3300028563 Bacteria 5291
35 Ga0265319_1007342 3300028563 Bacteria 4968
36 Ga0265319_1008495 3300028563 Bacteria 4495
37 Ga0265334_10002411 3300028573 Bacteria 8791
38 Ga0265334_10030799 3300028573 Bacteria 2146
39 Ga0265318_10000002 3300028577 Bacteria 428208
40 Ga0265318_10000799 3300028577 Bacteria 20849
41 Ga0265318_10000802 3300028577 Bacteria 20838
42 Ga0265318_10001326 3300028577 Bacteria 14820
43 Ga0265318_10003193 3300028577 Bacteria 8366
44 Ga0265318_10007062 3300028577 Bacteria 5112
45 Ga0265323_10000006 3300028653 Bacteria 141508
46 Ga0265323_10005722 3300028653 Bacteria 5270
47 Ga0265323_10008663 3300028653 Bacteria 4187
48 Ga0265323_10015215 3300028653 Bacteria 3029
49 Ga0265323_10056696 3300028653 Bacteria 1373
50 Ga0265322_10000047 3300028654 Bacteria 64814
51 Ga0265322_10000798 3300028654 Bacteria 11323
52 Ga0265322_10005331 3300028654 Bacteria 3807
53 Ga0265336_10002377 3300028666 Bacteria 7799
54 Ga0265336_10015617 3300028666 Bacteria 2493
55 Ga0265338_10000035 3300028800 Bacteria 243781
56 Ga0265338_10000132 3300028800 Bacteria 137378
57 Ga0265324_10007181 3300029957 Bacteria 4548
58 Ga0265324_10010590 3300029957 Bacteria 3547
59 Ga0265324_10014824 3300029957 Bacteria 2873
60 Ga0265330_10029190 3300031235 Bacteria 2482
61 Ga0265332_10048876 3300031238 Bacteria 1819
62 Ga0265328_10042510 3300031239 Bacteria 1673
63 Ga0265320_10000528 3300031240 Bacteria 29615
64 Ga0265320_10005007 3300031240 Bacteria 8588
65 Ga0265320_10005933 3300031240 Bacteria 7766
66 Ga0265320_10007750 3300031240 Bacteria 6633
67 Ga0265320_10013621 3300031240 Bacteria 4668
68 Ga0265320_10030565 3300031240 Bacteria 2775
69 Ga0265320_10073062 3300031240 Bacteria 1612
70 Ga0265325_10000699 3300031241 Bacteria 24325
71 Ga0265331_10004747 3300031250 Bacteria 8393
72 Ga0265331_10009060 3300031250 Bacteria 5621
73 Ga0265331_10033281 3300031250 Bacteria 2549
74 Ga0265327_10001038 3300031251 Bacteria 39174
75 Ga0265327_10010033 3300031251 Bacteria 6729
76 Ga0265327_10021871 3300031251 Bacteria 3846
77 Ga0265316_10000505 3300031344 Bacteria 43994
78 Ga0265316_10014524 3300031344 Bacteria 6922
79 Ga0265316_10049779 3300031344 Bacteria 3299
80 Ga0265316_10089387 3300031344 Bacteria 2351
81 Ga0265316_10140786 3300031344 Bacteria 1812
82 Ga0265313_10000608 3300031595 Bacteria 37141
83 Ga0265313_10001890 3300031595 Bacteria 19029
84 Ga0265313_10006729 3300031595 Bacteria 8040
85 Ga0265313_10015673 3300031595 Bacteria 4399
86 Ga0265313_10041574 3300031595 Bacteria 2263
87 Ga0265313_10082063 3300031595 Bacteria 1462
88 Ga0307508_10000031 3300031616 Bacteria 163301
89 Ga0265314_10002774 3300031711 Bacteria 17501
90 Ga0265314_10003608 3300031711 Bacteria 14888
91 Ga0265314_10010337 3300031711 Bacteria 7794
92 Ga0265314_10018263 3300031711 Bacteria 5473
93 Ga0265342_10014484 3300031712 Bacteria 5232
94 Ga0265342_10058975 3300031712 Bacteria 2268
95 Ga0395905_0308261 3300037471 Bacteria 1471
96 Ga0436365_1322081 3300039437 Bacteria 9526
97 Ga0451577_0000327 3300042876 Bacteria 88625
98 Ga0451577_0060769 3300042876 Bacteria 3369
99 Ga0451577_0107366 3300042876 Bacteria 2495
100 Ga0451577_0170686 3300042876 Bacteria 1960
101 Ga0453684_0005771 3300044712 Bacteria 24174
102 Ga0453684_0006729 3300044712 Bacteria 21656
103 Ga0453684_0053910 3300044712 Bacteria 5245
104 Ga0451576_0001485 3300045051 Bacteria 39656
105 Ga0451576_0051001 3300045051 Bacteria 4339
106 Ga0501032_0000259 3300049569 Bacteria 44300
107 Ga0501032_0049562 3300049569 Bacteria 2833
108 Ga0501033_0008768 3300049570 Bacteria 7819
109 Ga0501033_0008856 3300049570 Bacteria 7773
110 Ga0501034_0102369 3300049571 Bacteria 2857
111 Ga0501036_0002620 3300049572 Bacteria 14180
112 Ga0501037_0027162 3300049573 Bacteria 4228
113 Ga0501038_0002074 3300049574 Bacteria 18554
114 Ga0501043_0045649 3300049579 Bacteria 3445
115 Ga0501046_0004124 3300049580 Bacteria 13243
116 Ga0501046_0004717 3300049580 Bacteria 12293
117 Ga0501047_0024569 3300049581 Bacteria 5783
118 Ga0501047_0038924 3300049581 Bacteria 4599
119 Ga0501047_0289392 3300049581 Bacteria 1482
120 Ga0501073_0001663 3300049589 Bacteria 16483
121 Ga0501080_0024034 3300049742 Bacteria 5650
122 Ga0501080_0043593 3300049742 Bacteria 4178
123 Ga0501083_0000248 3300049744 Bacteria 34254
124 Ga0501083_0068192 3300049744 Bacteria 2367
125 Ga0501035_0000441 3300049822 Bacteria 46562
126 Ga0501035_0006243 3300049822 Bacteria 11206
127 Ga0501044_0000358 3300049823 Bacteria 57147
128 Ga0501044_0014810 3300049823 Bacteria 8406
129 nmdc:mga08y16_7_c1 3300050511 Bacteria 610289
130 nmdc:mga0rr50_3734_c1 3300050513 Bacteria 8822
131 Ga0495655_0000376 3300053083 Bacteria 7717
132 Ga0500568_0012560 3300053139 Bacteria 3888

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049581 Ga0501047_0289392 Ga0501047_0289392_452_1450 314
2 3300045051 Ga0451576_0001485 Ga0451576_0001485_16435_17670 348
3 3300037471 Ga0395905_0308261 Ga0395905_0308261_33_1190 357
4 3300005329 Ga0070683_100036576 Ga0070683_1000365762 359
5 3300025944 Ga0207661_10163361 Ga0207661_101633612 359
6 3300042876 Ga0451577_0060769 Ga0451577_0060769_642_1880 359
7 3300028653 Ga0265323_10008663 Ga0265323_100086632 360
8 3300031235 Ga0265330_10029190 Ga0265330_100291903 360
9 3300042876 Ga0451577_0170686 Ga0451577_0170686_305_1522 363
10 3300006028 Ga0070717_10000097 Ga0070717_1000009749 365
11 3300025928 Ga0207700_10009560 Ga0207700_100095603 365
12 3300053083 Ga0495655_0000376 Ga0495655_0000376_2811_4037 368
13 3300049822 Ga0501035_0000441 Ga0501035_0000441_45349_46503 369
14 3300031595 Ga0265313_10082063 Ga0265313_100820632 371
15 3300031711 Ga0265314_10018263 Ga0265314_100182633 371
16 3300028666 Ga0265336_10015617 Ga0265336_100156172 372
17 3300028563 Ga0265319_1000211 Ga0265319_100021111 375
18 3300028577 Ga0265318_10000799 Ga0265318_1000079910 375
19 3300031240 Ga0265320_10030565 Ga0265320_100305652 375
20 3300031595 Ga0265313_10015673 Ga0265313_100156731 375
21 3300031711 Ga0265314_10002774 Ga0265314_100027746 375
22 3300028653 Ga0265323_10015215 Ga0265323_100152153 377
23 3300009176 Ga0105242_10030888 Ga0105242_100308885 378
24 3300049579 Ga0501043_0045649 Ga0501043_0045649_1818_3035 378
25 3300006028 Ga0070717_10000029 Ga0070717_100000299 380
26 3300014325 Ga0163163_10127702 Ga0163163_101277022 380
27 3300031616 Ga0307508_10000031 Ga0307508_10000031109 380
28 3300049744 Ga0501083_0068192 Ga0501083_0068192_590_1825 382
29 3300028563 Ga0265319_1006707 Ga0265319_10067074 385
30 3300031240 Ga0265320_10005007 Ga0265320_100050074 385
31 3300031240 Ga0265320_10073062 Ga0265320_100730622 385
32 3300031595 Ga0265313_10041574 Ga0265313_100415742 385
33 3300031712 Ga0265342_10014484 Ga0265342_100144841 385
34 3300049570 Ga0501033_0008856 Ga0501033_0008856_1854_3095 386
35 3300049572 Ga0501036_0002620 Ga0501036_0002620_8493_9734 386
36 3300049574 Ga0501038_0002074 Ga0501038_0002074_547_1788 386
37 3300049580 Ga0501046_0004124 Ga0501046_0004124_7890_9131 386
38 3300049581 Ga0501047_0024569 Ga0501047_0024569_3313_4554 386
39 3300049742 Ga0501080_0043593 Ga0501080_0043593_2794_4035 386
40 3300049822 Ga0501035_0006243 Ga0501035_0006243_7811_9052 386
41 3300028556 Ga0265337_1001874 Ga0265337_10018745 387
42 3300028563 Ga0265319_1007342 Ga0265319_10073424 387
43 3300028577 Ga0265318_10003193 Ga0265318_100031933 387
44 3300028654 Ga0265322_10005331 Ga0265322_100053312 387
45 3300028666 Ga0265336_10002377 Ga0265336_100023773 387
46 3300031240 Ga0265320_10005933 Ga0265320_100059334 387
47 3300031250 Ga0265331_10004747 Ga0265331_100047477 387
48 3300031251 Ga0265327_10010033 Ga0265327_100100332 387
49 3300031344 Ga0265316_10049779 Ga0265316_100497793 387
50 3300031711 Ga0265314_10010337 Ga0265314_100103373 387
51 3300044712 Ga0453684_0005771 Ga0453684_0005771_16696_17925 387
52 3300028653 Ga0265323_10005722 Ga0265323_100057223 388
53 3300028653 Ga0265323_10056696 Ga0265323_100566961 388
54 3300031344 Ga0265316_10140786 Ga0265316_101407861 388
55 iso_pu_bacteria 2786546940 2788433006 389
56 3300005337 Ga0070682_100000113 Ga0070682_10000011313 390
57 3300005338 Ga0068868_100001479 Ga0068868_1000014796 390
58 3300005340 Ga0070689_100163079 Ga0070689_1001630792 390
59 3300005343 Ga0070687_100059948 Ga0070687_1000599481 390
60 3300014745 Ga0157377_10000072 Ga0157377_1000007235 390
61 3300026023 Ga0207677_10000215 Ga0207677_1000021514 390
62 3300026116 Ga0207674_10033853 Ga0207674_100338532 390
63 3300031251 Ga0265327_10001038 Ga0265327_1000103821 390
64 3300031251 Ga0265327_10021871 Ga0265327_100218712 390
65 3300028556 Ga0265337_1007577 Ga0265337_10075774 391
66 3300028573 Ga0265334_10030799 Ga0265334_100307992 391
67 3300028577 Ga0265318_10000802 Ga0265318_1000080218 391
68 3300028577 Ga0265318_10001326 Ga0265318_100013263 391
69 3300028577 Ga0265318_10007062 Ga0265318_100070622 391
70 3300028654 Ga0265322_10000047 Ga0265322_1000004747 391
71 3300028800 Ga0265338_10000132 Ga0265338_1000013211 391
72 3300029957 Ga0265324_10014824 Ga0265324_100148242 391
73 3300031240 Ga0265320_10000528 Ga0265320_1000052823 391
74 3300031240 Ga0265320_10013621 Ga0265320_100136212 391
75 3300031241 Ga0265325_10000699 Ga0265325_1000069913 391
76 3300031595 Ga0265313_10000608 Ga0265313_1000060812 391
77 3300031595 Ga0265313_10006729 Ga0265313_100067294 391
78 3300031712 Ga0265342_10058975 Ga0265342_100589752 391
79 3300005354 Ga0070675_100000018 Ga0070675_100000018128 392
80 3300005445 Ga0070708_100083605 Ga0070708_1000836052 392
81 3300005471 Ga0070698_100046721 Ga0070698_1000467212 392
82 3300005535 Ga0070684_100050527 Ga0070684_1000505272 392
83 3300005615 Ga0070702_100006203 Ga0070702_1000062034 392
84 3300006844 Ga0075428_100273052 Ga0075428_1002730522 392
85 3300007076 Ga0075435_100146845 Ga0075435_1001468452 392
86 3300009036 Ga0105244_10028243 Ga0105244_100282432 392
87 3300009094 Ga0111539_10000351 Ga0111539_1000035112 392
88 3300009098 Ga0105245_10000006 Ga0105245_10000006191 392
89 3300010375 Ga0105239_10040865 Ga0105239_100408652 392
90 3300025922 Ga0207646_10064950 Ga0207646_100649503 392
91 3300025926 Ga0207659_10000025 Ga0207659_100000253 392
92 3300025927 Ga0207687_10000006 Ga0207687_10000006249 392
93 3300027907 Ga0207428_10000028 Ga0207428_10000028194 392
94 3300028800 Ga0265338_10000035 Ga0265338_10000035177 392
95 3300029957 Ga0265324_10007181 Ga0265324_100071813 392
96 3300031344 Ga0265316_10089387 Ga0265316_100893872 392
97 3300039437 Ga0436365_1322081 Ga0436365_1322081_229_1455 392
98 3300044712 Ga0453684_0053910 Ga0453684_0053910_3865_5088 392
99 3300045051 Ga0451576_0051001 Ga0451576_0051001_271_1494 392
100 3300049589 Ga0501073_0001663 Ga0501073_0001663_12875_14101 392
101 3300050511 nmdc:mga08y16_7_c1 nmdc:mga08y16_7_c1_590050_591276 392
102 3300050513 nmdc:mga0rr50_3734_c1 nmdc:mga0rr50_3734_c1_138_1364 392
103 3300003320 rootH2_10147557 rootH2_101475573 393
104 3300028563 Ga0265319_1008495 Ga0265319_10084952 393
105 3300028573 Ga0265334_10002411 Ga0265334_100024114 393
106 3300028577 Ga0265318_10000002 Ga0265318_10000002276 393
107 3300028653 Ga0265323_10000006 Ga0265323_10000006104 393
108 3300028654 Ga0265322_10000798 Ga0265322_100007982 393
109 3300029957 Ga0265324_10010590 Ga0265324_100105904 393
110 3300031238 Ga0265332_10048876 Ga0265332_100488762 393
111 3300031239 Ga0265328_10042510 Ga0265328_100425101 393
112 3300031240 Ga0265320_10007750 Ga0265320_100077504 393
113 3300031250 Ga0265331_10009060 Ga0265331_100090605 393
114 3300031250 Ga0265331_10033281 Ga0265331_100332812 393
115 3300031344 Ga0265316_10000505 Ga0265316_1000050519 393
116 3300031344 Ga0265316_10014524 Ga0265316_100145243 393
117 3300031595 Ga0265313_10001890 Ga0265313_1000189013 393
118 3300031711 Ga0265314_10003608 Ga0265314_100036084 393
119 3300042876 Ga0451577_0000327 Ga0451577_0000327_54720_55967 393
120 3300042876 Ga0451577_0107366 Ga0451577_0107366_349_1575 393
121 3300044712 Ga0453684_0006729 Ga0453684_0006729_16168_17409 393
122 3300049569 Ga0501032_0000259 Ga0501032_0000259_18338_19564 393
123 3300049569 Ga0501032_0049562 Ga0501032_0049562_360_1601 393
124 3300049570 Ga0501033_0008768 Ga0501033_0008768_2762_4003 393
125 3300049571 Ga0501034_0102369 Ga0501034_0102369_1380_2618 393
126 3300049573 Ga0501037_0027162 Ga0501037_0027162_2246_3487 393
127 3300049580 Ga0501046_0004717 Ga0501046_0004717_8604_9845 393
128 3300049581 Ga0501047_0038924 Ga0501047_0038924_1544_2770 393
129 3300049742 Ga0501080_0024034 Ga0501080_0024034_222_1463 393
130 3300049744 Ga0501083_0000248 Ga0501083_0000248_13359_14588 393
131 3300049823 Ga0501044_0000358 Ga0501044_0000358_33312_34538 393
132 3300049823 Ga0501044_0014810 Ga0501044_0014810_2932_4173 393
133 3300053139 Ga0500568_0012560 Ga0500568_0012560_1789_3024 393

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

306

420

0.98

PF12704

MacB_PCD

MacB-like periplasmic core domain

39

267

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
5c59-assembly5.cif.gz_E crystal structure of the periplasmic region of macb from e. coli 0.9114 126 218
3ftj-assembly1.cif.gz_A crystal structure of the periplasmic region of macb from actinobacillus actinomycetemcomitans 0.8412 49 276
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.8188 60 267
3ftj-assembly1.cif.gz_A crystal structure of the periplasmic region of macb from actinobacillus actinomycetemcomitans 0.8164 49 276
5f9q-assembly1.cif.gz_A crystal structure of the extracellular domain of noncanonic abc-type transporter yknz from gram-positive bacteria 0.811 60 267
ID Description Score Start End Superfamily
af_F1LM38_162_264_3.30.1370.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;K Homology domain, type 1 0.5947 218 254 3.30.1370.10
af_Q3KR16_385_515_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.5567 224 256 2.30.29.30
af_O54718_160_273_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.5553 221 254 2.30.29.30
af_Q22888_2_205_3.30.760.10 Alpha Beta;2-Layer Sandwich;RNA Cap, Translation Initiation Factor Eif4e;RNA Cap, Translation Initiation Factor Eif4e 0.5205 221 274 3.30.760.10
af_Q7TSI1_550_655_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.5114 227 259 2.30.29.30
ID Description Score Start End GO Terms
AF-A0A382BGQ5-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.9107 40 278 GO:0005886
GO:0022857
AF-A0A3R7KA49-F1-model_v4 FtsX-like permease family protein 0.9097 1 391 GO:0005886
GO:0022857
AF-A0A522RHV7-F1-model_v4 ABC transporter permease 0.9033 1 322 GO:0005886
GO:0022857
AF-A0A3R7KA49-F1-model_v4 FtsX-like permease family protein 0.9031 1 391 GO:0005886
GO:0022857
AF-X1F4S0-F1-model_v4 MacB-like periplasmic core domain-containing protein 0.8997 69 214

Feature Viewer

pLDDT pTM Quality
75.48 0.56 Medium
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Predicted Structure (AlphaFold2)

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