F158158

General Info

Members Datasets Scaffolds Average Seq Length
133 107 114 768

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2818991444|2819585879
Length 814
Sequence LAGCLLLCGAQQSMAQSLTVESIMRDPKWIGSSPSNIIWNYNSKNLYFDWNPSKTASDSVYSTSITGSKPEKAGYRQSQLAAAISRGQYSKSRSYIVYTWAGDLFLLEVKTGNTIRITHTEESESNPTFFKNDEYIAYLRNQNLYAWHIKSGITEQLTNFSRAGETPAPTTAGGMAGGGRGRGGFGGGGAATATSGNAGANTAKTSGNRQEQWLQQDELRLMDIVRERKEKKDARDAFLKTVKETDTLVAINIGEKALSSVQISPDGRFITYRLTQAATGGKTTVVPNYITESSFTTDIPARTKVGAAQAKHEFFVFDTQRDTIITVGTDSIPGITDLPDYTKDYPTGIPKKPTPRPVAVNNLVWNEAGTAAVVEIRSQDNKDRWLMLLDAATGKLTLADRQRDEAWIGGPGIGYGGPLDWLNNTTFYFQSEATGYAHLYTYNMATHDKKALTQGNYEVQDVKLNQAKTHFYLLTNETHPGKQHWYRIKTDGSDKQQITTMEGGYDISISPDEKYIAYRYSYINKPWELYVQENTSGKKPVQVTTLAASDSFRAYPWRETKIFTIPARDGKNIYARIYEPASGKKNGAAVIFVHGAGYLQNVHYWWSQYFREYMFNNLLADKGYTVLDIDYRASSGYGRDWRTGIYRYMGGKDLDDEVDAAQYLVKQQGIDAKKIGIYGGSYGGFMTLMALFTQPDVFKAGAALRPVTDWAHYNHGYTSNILNEPFTDSIAYARSSPINFAAGLKNHLLICHGMVDVNVHFQDAVRLSQRLIELGKDNWQLAAYPMEDHGFVEPSSWTDEYKRILKLFDTTLLP

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2818991444 Filimonas endophytica 3197 Isolate Unclassified
3 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
4 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
5 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
6 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
7 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
8 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
9 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
10 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
11 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
12 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
13 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
14 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
15 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
16 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
17 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
18 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
19 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
20 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
21 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
22 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
23 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
24 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
25 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
26 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
29 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
30 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
31 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
32 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
33 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
57 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
58 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
59 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
60 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
66 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
79 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
80 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
83 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
84 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
85 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
94 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
101 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
102 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
103 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
104 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
105 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
106 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
107 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 85.71
Metatranscriptomes 0
Isolates 14.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.29
Nodule 0
Rhizoplane 0
Rhizosphere 68.42
Stem 0
Stem Tuber 0
Unclassified 14.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1000007 3300002738 Bacteria 335932
2 JGI25153J46596_10001476 3300003215 Bacteria 14022
3 rootL2_10022173 3300003322 Bacteria 36296
4 rootH1_10020553 3300003323 Bacteria 10956
5 JGI25160J50197_1001808 3300003354 Bacteria 10319
6 JGI25160J50197_1002325 3300003354 Bacteria 8896
7 Ga0055528_1000164 3300003790 Bacteria 55729
8 Ga0065165_1000010 3300005262 Bacteria 323737
9 Ga0065165_1000142 3300005262 Bacteria 124889
10 Ga0065704_10077124 3300005289 Bacteria 4847
11 Ga0070660_100000647 3300005339 Bacteria 23049
12 Ga0070689_100025725 3300005340 Unclassified 4424
13 Ga0070668_100030130 3300005347 Bacteria 4125
14 Ga0070668_100036181 3300005347 Bacteria 3767
15 Ga0070669_100038728 3300005353 Bacteria 3461
16 Ga0070673_100015871 3300005364 Bacteria 5305
17 Ga0070688_100023253 3300005365 Bacteria 3643
18 Ga0070688_100031005 3300005365 Bacteria 3213
19 Ga0070659_100014360 3300005366 Bacteria 5917
20 Ga0070681_10083959 3300005458 Bacteria 3137
21 Ga0070679_100090477 3300005530 Unclassified 3048
22 Ga0070672_100028908 3300005543 Bacteria 4151
23 Ga0070665_100012508 3300005548 Bacteria 8551
24 Ga0068855_100079048 3300005563 Bacteria 3815
25 Ga0068859_100014583 3300005617 Bacteria 7894
26 Ga0068859_100018235 3300005617 Bacteria 7057
27 Ga0068860_100001033 3300005843 Bacteria 30635
28 Ga0068871_100060941 3300006358 Bacteria 3079
29 Ga0075428_100024394 3300006844 Bacteria 6692
30 Ga0068865_100005344 3300006881 Bacteria 7779
31 Ga0097620_100014582 3300006931 Bacteria 7894
32 Ga0097620_100018236 3300006931 Bacteria 7057
33 Ga0111539_10006556 3300009094 Bacteria 15004
34 Ga0111539_10017336 3300009094 Bacteria 8913
35 Ga0105237_10006513 3300009545 Bacteria 12929
36 Ga0105249_10005958 3300009553 Bacteria 10563
37 Ga0157373_10001583 3300013100 Bacteria 17384
38 Ga0157371_10000548 3300013102 Bacteria 44733
39 Ga0157371_10002691 3300013102 Bacteria 16786
40 Ga0157371_10005517 3300013102 Bacteria 10649
41 Ga0157371_10009241 3300013102 Bacteria 7777
42 Ga0157371_10019182 3300013102 Bacteria 5046
43 Ga0157371_10046973 3300013102 Bacteria 3068
44 Ga0157370_10039421 3300013104 Unclassified 4565
45 Ga0157374_10012628 3300013296 Bacteria 7354
46 Ga0163162_10002119 3300013306 Bacteria 18639
47 Ga0157372_10069715 3300013307 Bacteria 3954
48 Ga0157372_10075514 3300013307 Bacteria 3803
49 Ga0157375_10038427 3300013308 Bacteria 4596
50 Ga0157380_10007859 3300014326 Bacteria 7591
51 Ga0182006_1006850 3300015261 Bacteria 5260
52 Ga0209436_103759 3300025208 Bacteria 3924
53 Ga0209646_1000002 3300025246 Bacteria 1425781
54 Ga0209026_1001142 3300025250 Bacteria 12492
55 Ga0209673_1000082 3300025273 Bacteria 219716
56 Ga0209130_1001800 3300025284 Bacteria 12550
57 Ga0209676_1000116 3300025292 Bacteria 203383
58 Ga0209758_1004458 3300025297 Bacteria 11636
59 Ga0209050_1000555 3300025298 Bacteria 61428
60 Ga0209050_1008354 3300025298 Bacteria 5555
61 Ga0207426_1000104 3300025302 Bacteria 249464
62 Ga0207426_1000493 3300025302 Bacteria 59050
63 Ga0207426_1000514 3300025302 Bacteria 56462
64 Ga0207426_1001193 3300025302 Bacteria 23085
65 Ga0209257_1002719 3300025304 Bacteria 16820
66 Ga0207657_10005023 3300025919 Bacteria 13884
67 Ga0207652_10064384 3300025921 Bacteria 3172
68 Ga0207681_10018457 3300025923 Bacteria 4394
69 Ga0207691_10006642 3300025940 Bacteria 11163
70 Ga0207689_10016294 3300025942 Bacteria 6296
71 Ga0207689_10024215 3300025942 Bacteria 5093
72 Ga0207661_10030068 3300025944 Bacteria 4179
73 Ga0207667_10096664 3300025949 Bacteria 3048
74 Ga0207648_10008912 3300026089 Bacteria 9655
75 Ga0207675_100000894 3300026118 Bacteria 29776
76 Ga0268264_10010881 3300028381 Bacteria 7517
77 Ga0268264_10048662 3300028381 Bacteria 3527
78 Ga0307515_10000012 3300028794 Bacteria 582232
79 Ga0307511_10013252 3300030521 Bacteria 8059
80 Ga0316177_1014306 3300030731 Bacteria 26625
81 Ga0316183_1153674 3300030742 Bacteria 79729
82 Ga0265327_10000087 3300031251 Bacteria 198174
83 Ga0307514_10049110 3300031649 Bacteria 3283
84 Ga0316576_10002802 3300031727 Bacteria 10032
85 Ga0316578_10011238 3300031728 Bacteria 4675
86 Ga0307410_10020498 3300031852 Bacteria 4045
87 Ga0307414_10001480 3300032004 Bacteria 12221
88 Ga0307414_10018929 3300032004 Bacteria 4254
89 Ga0395899_0009178 3300037312 Bacteria 7593
90 Ga0395898_0015664 3300037466 Bacteria 7769
91 Ga0395901_0034797 3300038443 Bacteria 5203
92 Ga0436365_0450598 3300039437 Bacteria 38661
93 Ga0439431_0000788 3300041997 Bacteria 6838
94 Ga0451577_0001803 3300042876 Bacteria 27398
95 Ga0466972_0000001 3300044658 Bacteria 412457
96 Ga0466972_0000878 3300044658 Bacteria 14447
97 Ga0466972_0001021 3300044658 Bacteria 13421
98 Ga0453683_0000084 3300044673 Bacteria 142500
99 Ga0453683_0055864 3300044673 Bacteria 2470
100 Ga0453684_0045565 3300044712 Bacteria 5847
101 Ga0453684_0143955 3300044712 Bacteria 2842
102 Ga0451576_0000870 3300045051 Bacteria 58059
103 Ga0451576_0005846 3300045051 Bacteria 15275
104 Ga0495638_0000004 3300046460 Bacteria 700795
105 Ga0495580_0045300 3300046472 Bacteria 3125
106 Ga0501034_0003965 3300049571 Bacteria 16631
107 Ga0501034_0013701 3300049571 Bacteria 8338
108 Ga0501044_0008005 3300049823 Bacteria 11614
109 nmdc:mga08y16_13138_c1 3300050511 Bacteria 8711
110 Ga0500578_0000694 3300053086 Bacteria 40191
111 Ga0500568_0000702 3300053139 Bacteria 24042
112 Ga0500588_0003298 3300053146 Bacteria 3390
113 Ga0500616_0000015 3300053153 Bacteria 633259
114 Ga0500611_000007 3300053727 Bacteria 210964

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003323 rootH1_10020553 rootH1_100205539 640
2 3300037312 Ga0395899_0009178 Ga0395899_0009178_5507_7573 651
3 3300028794 Ga0307515_10000012 Ga0307515_10000012309 703
4 3300031649 Ga0307514_10049110 Ga0307514_100491102 703
5 3300013102 Ga0157371_10005517 Ga0157371_100055173 723
6 3300013104 Ga0157370_10039421 Ga0157370_100394211 723
7 3300025949 Ga0207667_10096664 Ga0207667_100966642 723
8 3300053727 Ga0500611_000007 Ga0500611_000007_142617_145046 725
9 3300013307 Ga0157372_10075514 Ga0157372_100755142 728
10 3300006358 Ga0068871_100060941 Ga0068871_1000609412 731
11 3300025298 Ga0209050_1008354 Ga0209050_10083544 731
12 3300025921 Ga0207652_10064384 Ga0207652_100643843 731
13 3300037466 Ga0395898_0015664 Ga0395898_0015664_4646_7006 731
14 3300038443 Ga0395901_0034797 Ga0395901_0034797_719_3079 731
15 3300005353 Ga0070669_100038728 Ga0070669_1000387282 733
16 3300005364 Ga0070673_100015871 Ga0070673_1000158714 733
17 3300005543 Ga0070672_100028908 Ga0070672_1000289082 733
18 3300005617 Ga0068859_100018235 Ga0068859_1000182355 733
19 3300006931 Ga0097620_100018236 Ga0097620_1000182365 733
20 3300014326 Ga0157380_10007859 Ga0157380_100078595 733
21 3300025923 Ga0207681_10018457 Ga0207681_100184573 733
22 3300005458 Ga0070681_10083959 Ga0070681_100839591 734
23 3300046460 Ga0495638_0000004 Ga0495638_0000004_395288_397648 734
24 3300025940 Ga0207691_10006642 Ga0207691_100066429 735
25 3300013102 Ga0157371_10009241 Ga0157371_100092412 737
26 3300005347 Ga0070668_100036181 Ga0070668_1000361812 739
27 3300005548 Ga0070665_100012508 Ga0070665_1000125083 739
28 3300005617 Ga0068859_100014583 Ga0068859_1000145832 739
29 3300006881 Ga0068865_100005344 Ga0068865_1000053442 739
30 3300006931 Ga0097620_100014582 Ga0097620_1000145822 739
31 3300013296 Ga0157374_10012628 Ga0157374_100126281 739
32 3300013308 Ga0157375_10038427 Ga0157375_100384273 739
33 3300025942 Ga0207689_10024215 Ga0207689_100242153 739
34 3300026089 Ga0207648_10008912 Ga0207648_100089127 739
35 3300028381 Ga0268264_10048662 Ga0268264_100486622 739
36 3300003322 rootL2_10022173 rootL2_1002217313 740
37 3300044673 Ga0453683_0000084 Ga0453683_0000084_17843_20200 740
38 3300045051 Ga0451576_0000870 Ga0451576_0000870_50592_52949 740
39 3300013307 Ga0157372_10069715 Ga0157372_100697152 743
40 3300013100 Ga0157373_10001583 Ga0157373_100015831 745
41 3300013102 Ga0157371_10002691 Ga0157371_1000269110 745
42 3300053153 Ga0500616_0000015 Ga0500616_0000015_430013_432451 745
43 3300005347 Ga0070668_100030130 Ga0070668_1000301302 746
44 3300005365 Ga0070688_100023253 Ga0070688_1000232532 746
45 3300009094 Ga0111539_10017336 Ga0111539_100173362 746
46 3300026118 Ga0207675_100000894 Ga0207675_10000089418 746
47 3300009553 Ga0105249_10005958 Ga0105249_100059589 748
48 3300044658 Ga0466972_0000001 Ga0466972_0000001_275126_277483 748
49 3300005366 Ga0070659_100014360 Ga0070659_1000143602 749
50 3300009545 Ga0105237_10006513 Ga0105237_100065135 749
51 3300005262 Ga0065165_1000142 Ga0065165_1000142111 754
52 3300005530 Ga0070679_100090477 Ga0070679_1000904772 754
53 3300005563 Ga0068855_100079048 Ga0068855_1000790482 754
54 3300025292 Ga0209676_1000116 Ga0209676_100011652 754
55 3300005339 Ga0070660_100000647 Ga0070660_10000064715 755
56 3300025919 Ga0207657_10005023 Ga0207657_1000502310 755
57 3300031251 Ga0265327_10000087 Ga0265327_1000008784 756
58 3300045051 Ga0451576_0005846 Ga0451576_0005846_8296_10653 756
59 3300015261 Ga0182006_1006850 Ga0182006_10068502 757
60 3300031727 Ga0316576_10002802 Ga0316576_100028027 757
61 3300031728 Ga0316578_10011238 Ga0316578_100112382 757
62 3300039437 Ga0436365_0450598 Ga0436365_0450598_16307_18772 757
63 3300044658 Ga0466972_0000878 Ga0466972_0000878_3075_5507 757
64 3300044673 Ga0453683_0055864 Ga0453683_0055864_14_2413 757
65 3300013102 Ga0157371_10000548 Ga0157371_1000054843 760
66 3300025942 Ga0207689_10016294 Ga0207689_100162945 760
67 3300032004 Ga0307414_10018929 Ga0307414_100189292 761
68 3300005843 Ga0068860_100001033 Ga0068860_10000103324 762
69 3300013306 Ga0163162_10002119 Ga0163162_100021198 762
70 3300028381 Ga0268264_10010881 Ga0268264_100108814 762
71 3300030731 Ga0316177_1014306 Ga0316177_101430615 765
72 3300025944 Ga0207661_10030068 Ga0207661_100300681 766
73 3300030742 Ga0316183_1153674 Ga0316183_115367441 766
74 3300032004 Ga0307414_10001480 Ga0307414_100014808 768
75 3300042876 Ga0451577_0001803 Ga0451577_0001803_4615_6969 768
76 3300044712 Ga0453684_0045565 Ga0453684_0045565_3301_5655 768
77 iso_pu_bacteria 2896109856 2896113570 768
78 3300044712 Ga0453684_0143955 Ga0453684_0143955_275_2692 769
79 iso_pu_bacteria 2522125168 2522548927 769
80 3300009094 Ga0111539_10006556 Ga0111539_100065567 770
81 3300049571 Ga0501034_0003965 Ga0501034_0003965_9371_11839 770
82 3300050511 nmdc:mga08y16_13138_c1 nmdc:mga08y16_13138_c1_3942_6305 770
83 iso_pu_bacteria 2840677318 2840677562 770
84 iso_pu_bacteria 2896085136 2896085380 770
85 iso_pu_bacteria 2902048731 2902050609 770
86 iso_pu_bacteria 2919186247 2919188410 771
87 iso_pu_bacteria 2939664404 2939667505 771
88 3300005289 Ga0065704_10077124 Ga0065704_100771243 772
89 3300046472 Ga0495580_0045300 Ga0495580_0045300_220_2583 772
90 iso_pu_bacteria 2818991444 2819585879 772
91 iso_pu_bacteria 2884634485 2884635312 772
92 3300005340 Ga0070689_100025725 Ga0070689_1000257252 773
93 3300005365 Ga0070688_100031005 Ga0070688_1000310052 773
94 iso_pu_bacteria 2818991460 2819680473 773
95 iso_pu_bacteria 2842903701 2842904949 773
96 iso_pu_bacteria 2884791551 2884798147 773
97 iso_pu_bacteria 2919692658 2919693199 773
98 3300003354 JGI25160J50197_1001808 JGI25160J50197_10018085 774
99 3300025302 Ga0207426_1000104 Ga0207426_1000104163 774
100 iso_pu_bacteria 2929177148 2929182770 774
101 iso_pu_bacteria 2945977869 2945978724 774
102 iso_pu_bacteria 2946013367 2946015409 774
103 3300031852 Ga0307410_10020498 Ga0307410_100204982 776
104 3300041997 Ga0439431_0000788 Ga0439431_0000788_2570_4924 776
105 iso_pu_bacteria 2883068021 2883072944 776
106 3300049571 Ga0501034_0013701 Ga0501034_0013701_1638_4097 777
107 3300049823 Ga0501044_0008005 Ga0501044_0008005_9120_11579 777
108 3300053146 Ga0500588_0003298 Ga0500588_0003298_675_3140 777
109 3300013102 Ga0157371_10019182 Ga0157371_100191824 778
110 3300025208 Ga0209436_103759 Ga0209436_1037592 778
111 3300025284 Ga0209130_1001800 Ga0209130_10018003 778
112 3300025302 Ga0207426_1001193 Ga0207426_100119312 778
113 3300053086 Ga0500578_0000694 Ga0500578_0000694_27955_30387 778
114 iso_pu_bacteria 2929921140 2929923442 778
115 3300013102 Ga0157371_10046973 Ga0157371_100469732 779
116 3300025250 Ga0209026_1001142 Ga0209026_10011422 779
117 3300030521 Ga0307511_10013252 Ga0307511_100132524 779
118 iso_pu_bacteria 8003151029 8003152845 779
119 3300044658 Ga0466972_0001021 Ga0466972_0001021_2073_4454 780
120 3300053139 Ga0500568_0000702 Ga0500568_0000702_5621_7987 780
121 3300003354 JGI25160J50197_1002325 JGI25160J50197_10023253 781
122 3300003790 Ga0055528_1000164 Ga0055528_10001648 781
123 3300005262 Ga0065165_1000010 Ga0065165_1000010151 781
124 3300006844 Ga0075428_100024394 Ga0075428_1000243945 781
125 3300025273 Ga0209673_1000082 Ga0209673_1000082125 781
126 3300025297 Ga0209758_1004458 Ga0209758_10044584 781
127 3300025298 Ga0209050_1000555 Ga0209050_10005558 781
128 3300025302 Ga0207426_1000514 Ga0207426_100051439 781
129 3300025304 Ga0209257_1002719 Ga0209257_100271913 781
130 3300002738 JGI25154J39366_1000007 JGI25154J39366_1000007111 783
131 3300003215 JGI25153J46596_10001476 JGI25153J46596_100014761 783
132 3300025246 Ga0209646_1000002 Ga0209646_1000002716 783
133 3300025302 Ga0207426_1000493 Ga0207426_100049347 783

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00326

Peptidase_S9

Prolyl oligopeptidase family

609

813

0.97

PF07676

PD40

WD40-like Beta Propeller Repeat

115

146

0.95

PF00930

DPPIV_N

Dipeptidyl peptidase IV (DPP IV) N-terminal region

255

527

0.82

PF20434

BD-FAE

BD-FAE

576

703

0.78

PF02129

Peptidase_S15

X-Pro dipeptidyl-peptidase (S15 family)

569

733

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
5yp1-assembly2.cif.gz_D crystal structure of dipeptidyl peptidase iv (dpp iv) from pseudoxanthomonas mexicana wo24 0.7886 24 783
5yp4-assembly2.cif.gz_C crystal structure of dipeptidyl peptidase iv (dpp iv) with lys-pro from pseudoxanthomonas mexicana wo24 0.7882 24 783
2ecf-assembly1.cif.gz_A-2 crystal structure of dipeptidyl aminopeptidase iv from stenotrophomonas maltophilia 0.7873 25 783
5yp1-assembly2.cif.gz_D crystal structure of dipeptidyl peptidase iv (dpp iv) from pseudoxanthomonas mexicana wo24 0.7866 24 783
2ecf-assembly1.cif.gz_A-2 crystal structure of dipeptidyl aminopeptidase iv from stenotrophomonas maltophilia 0.7852 25 783
ID Description Score Start End Superfamily
af_A0A0P0WC96_1_125_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8756 94 163 2.130.10.10
2ecfA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.875 526 783 3.40.50.1820
5oljA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8731 526 781 3.40.50.1820
5oljA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8699 526 781 3.40.50.1820
2z3wA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8691 528 781 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A1I5VM61-F1-model_v4 Dipeptidyl aminopeptidase/acylaminoacyl peptidase 0.9613 18 783 GO:0004177
GO:0004252
GO:0006508
GO:0008239
AF-A0A2D8KMN9-F1-model_v4 S9 family peptidase 0.9507 441 782 GO:0006508
GO:0008236
GO:0008239
AF-A0A3C0IL92-F1-model_v4 S9 family peptidase 0.9494 300 781 GO:0004252
GO:0006508
GO:0008239
AF-A0A7X5WHJ4-F1-model_v4 deleted 0.9472 440 781
AF-A0A7X0DZH6-F1-model_v4 Dipeptidyl aminopeptidase/acylaminoacyl peptidase 0.9441 18 783 GO:0004177
GO:0006508
GO:0008236
GO:0008239

Feature Viewer

pLDDT pTM Quality
83.58 0.82 High
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Predicted Structure (AlphaFold2)

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