F158442

General Info

Members Datasets Scaffolds Average Seq Length
134 99 96 221

Family's Representative Sequence

Representative Sequence 3300003323|rootH1_10035709|rootH1_100357099
Length 231
Sequence LYTIFIEMNFALIKDFMTLLEQFESDADPNSYPCTIEGFKSWISDQENTQHADSFEEPYWEGKENGRTPESAISTLLVHLNRYAKTYSKSAISDSEFSTQEDFIYLINLKAFGEMTKMALIKKNIHDKPVGMLIIARLLRQGLIEQTDSDLDKRSKLIRISERGLIVLEKQMEKIRQATNIVAGNLNHKEKMDLIRILNKLDRFHYPIFSRNINSDNLINTVYDEYAFKNL

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
3 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
4 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
5 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
6 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
7 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
8 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
9 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
10 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
11 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
12 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
13 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
14 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
15 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
16 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
17 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
18 2738543023 Pedobacter sp. OK628 Isolate Unclassified
19 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
20 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
21 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
22 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
23 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
24 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
25 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
26 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
27 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
28 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
29 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
30 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
31 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
32 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
33 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
34 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
35 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
36 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
37 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
38 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
39 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
40 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
41 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
42 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
43 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
44 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
45 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
46 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
47 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
48 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
49 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
50 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
64 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
73 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
74 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
75 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
76 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
77 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
78 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
79 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
80 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
81 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
82 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
83 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
84 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
85 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
86 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
87 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
88 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
89 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
90 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
91 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
92 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
93 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
99 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.9
Metatranscriptomes 0.75
Isolates 28.36

Biome Distribution

Category Percentage (%)
Aerial Root 1.49
Bulb 0
Endosphere 1.49
Nodule 0.75
Rhizoplane 1.49
Rhizosphere 68.66
Stem 0
Stem Tuber 0
Unclassified 26.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1420151 2162886007 Bacteria 2376
2 SwRhRL2b_contig_2771659 2162886007 Bacteria 1084
3 SwRhRL2b_contig_3118068 2162886007 Bacteria 877
4 rootH2_10235473 3300003320 Bacteria 1205
5 rootH1_10035709 3300003323 Bacteria 9467
6 rootH1_10385911 3300003323 Bacteria 1248
7 Ga0058860_10133976 3300004801 Bacteria 1354
8 Ga0065714_10004690 3300005288 Bacteria 8800
9 Ga0065714_10065268 3300005288 Bacteria 11281
10 Ga0065704_10077041 3300005289 Bacteria 4877
11 Ga0065704_10079428 3300005289 Bacteria 4165
12 Ga0065704_10083251 3300005289 Bacteria 3489
13 Ga0065704_10128512 3300005289 Bacteria 1661
14 Ga0070683_100005739 3300005329 Bacteria 10372
15 Ga0070682_100000175 3300005337 Bacteria 47814
16 Ga0070659_100446597 3300005366 Bacteria 1096
17 Ga0070667_100245599 3300005367 Bacteria 1599
18 Ga0070663_100096760 3300005455 Bacteria 2196
19 Ga0070684_100063991 3300005535 Bacteria 3226
20 Ga0105244_10000124 3300009036 Bacteria 78977
21 Ga0111539_10163215 3300009094 Bacteria 2606
22 Ga0105243_10000002 3300009148 Bacteria 856281
23 Ga0105238_10168264 3300009551 Bacteria 2168
24 Ga0105249_10306361 3300009553 Bacteria 1595
25 Ga0105239_10572479 3300010375 Bacteria 1287
26 Ga0157373_10000009 3300013100 Bacteria 201551
27 Ga0157373_10226953 3300013100 Bacteria 1318
28 Ga0157371_10000037 3300013102 Bacteria 214866
29 Ga0157371_10001650 3300013102 Bacteria 22754
30 Ga0157370_10000068 3300013104 Bacteria 113329
31 Ga0157370_10000392 3300013104 Bacteria 55046
32 Ga0157370_10003961 3300013104 Bacteria 17235
33 Ga0157370_10061052 3300013104 Bacteria 3577
34 Ga0157370_11067895 3300013104 Bacteria 730
35 Ga0157369_10028319 3300013105 Bacteria 6202
36 Ga0163162_10003045 3300013306 Bacteria 16018
37 Ga0163162_11605727 3300013306 Bacteria 742
38 Ga0157375_10000052 3300013308 Bacteria 130032
39 Ga0157380_10936436 3300014326 Unclassified 895
40 Ga0182008_10000028 3300014497 Bacteria 176968
41 Ga0182006_1000048 3300015261 Bacteria 184700
42 Ga0163161_10000903 3300017792 Bacteria 22958
43 Ga0163161_10059963 3300017792 Bacteria 2768
44 Ga0209675_1000263 3300025291 Bacteria 51088
45 Ga0207655_1000539 3300025728 Bacteria 47934
46 Ga0207709_10000003 3300025935 Bacteria 1050072
47 Ga0207661_10004274 3300025944 Bacteria 10000
48 Ga0316176_1204777 3300030732 Bacteria 10527
49 Ga0307416_100000003 3300032002 Bacteria 509060
50 Ga0307414_10000009 3300032004 Bacteria 359782
51 Ga0307414_10041705 3300032004 Bacteria 3112
52 Ga0307414_10087462 3300032004 Bacteria 2303
53 Ga0307414_10328310 3300032004 Bacteria 1305
54 Ga0451851_0123639 3300041507 Bacteria 949
55 Ga0495596_0002153 3300046500 Bacteria 10746
56 Ga0495606_0026590 3300046507 Bacteria 4123
57 Ga0495606_0030442 3300046507 Bacteria 3771
58 Ga0495606_0130818 3300046507 Bacteria 1492
59 Ga0495616_0045586 3300046513 Bacteria 2218
60 Ga0495643_0000970 3300046522 Bacteria 29411
61 Ga0495663_0000401 3300046525 Bacteria 15934
62 Ga0495609_0000083 3300046538 Bacteria 115045
63 Ga0495633_0000562 3300046558 Bacteria 36317
64 Ga0495625_0009743 3300046660 Bacteria 7996
65 Ga0495686_0001665 3300047472 Bacteria 23119
66 Ga0496102_0246988 3300048905 Bacteria 1683
67 Ga0496115_0127906 3300048918 Bacteria 2093
68 Ga0496116_0000053 3300048919 Bacteria 291837
69 Ga0496116_0006074 3300048919 Bacteria 11050
70 Ga0496117_0000050 3300048920 Bacteria 292727
71 Ga0496117_0002592 3300048920 Bacteria 22489
72 Ga0496118_0000044 3300048921 Bacteria 283524
73 Ga0496118_0233840 3300048921 Bacteria 1058
74 Ga0496119_0000002 3300048922 Bacteria 738385
75 Ga0496122_0000159 3300048925 Bacteria 159297
76 Ga0496122_0000191 3300048925 Bacteria 140173
77 Ga0496122_0000290 3300048925 Bacteria 111581
78 Ga0496122_0000465 3300048925 Bacteria 84396
79 Ga0496122_0001730 3300048925 Bacteria 33861
80 Ga0496122_0010657 3300048925 Bacteria 9438
81 Ga0496122_0028502 3300048925 Bacteria 4735
82 Ga0496123_0000579 3300048926 Bacteria 62330
83 Ga0496123_0016210 3300048926 Bacteria 6067
84 Ga0496123_0043858 3300048926 Bacteria 3066
85 Ga0496123_0099771 3300048926 Bacteria 1694
86 Ga0496124_0177181 3300048927 Bacteria 1644
87 Ga0496124_0446574 3300048927 Bacteria 883
88 Ga0496125_0000181 3300048928 Bacteria 138133
89 Ga0496125_0014854 3300048928 Bacteria 7562
90 Ga0501033_0043023 3300049570 Bacteria 3365
91 Ga0501034_0000917 3300049571 Bacteria 43049
92 Ga0501037_0135974 3300049573 Bacteria 1760
93 Ga0501038_0057135 3300049574 Bacteria 3351
94 Ga0501043_0400660 3300049579 Bacteria 1037
95 Ga0501048_0749362 3300049582 Unclassified 702
96 Ga0500646_0014479 3300053090 Bacteria 2048

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2993372514 2993373754 189
2 3300041507 Ga0451851_0123639 Ga0451851_0123639_200_796 197
3 3300049582 Ga0501048_0749362 Ga0501048_0749362_11_625 203
4 3300049573 Ga0501037_0135974 Ga0501037_0135974_214_885 206
5 3300049574 Ga0501038_0057135 Ga0501038_0057135_164_835 206
6 3300049570 Ga0501033_0043023 Ga0501033_0043023_505_1176 208
7 3300049571 Ga0501034_0000917 Ga0501034_0000917_30387_31058 208
8 iso_pu_bacteria 2582581278 2585141763 208
9 3300032004 Ga0307414_10087462 Ga0307414_100874622 209
10 iso_pu_bacteria 2721755487 2722729888 209
11 iso_pu_bacteria 2904780799 2904783065 210
12 iso_pu_bacteria 2919177583 2919179761 210
13 3300009148 Ga0105243_10000002 Ga0105243_10000002303 213
14 3300025935 Ga0207709_10000003 Ga0207709_10000003306 213
15 3300048919 Ga0496116_0006074 Ga0496116_0006074_9966_10607 213
16 3300048920 Ga0496117_0002592 Ga0496117_0002592_20220_20861 213
17 3300048925 Ga0496122_0028502 Ga0496122_0028502_1135_1776 213
18 3300048926 Ga0496123_0043858 Ga0496123_0043858_445_1086 213
19 3300048927 Ga0496124_0446574 Ga0496124_0446574_205_861 215
20 iso_pu_bacteria 2852627209 2852631348 215
21 iso_pu_bacteria 2585428060 2587747885 216
22 iso_pu_bacteria 2588253712 2588446424 216
23 iso_pu_bacteria 2896317667 2896318551 216
24 3300017792 Ga0163161_10000903 Ga0163161_1000090316 217
25 iso_pu_bacteria 2585428061 2587750397 217
26 iso_pu_bacteria 2738541273 2738698960 217
27 iso_pu_bacteria 2738543014 2739254676 217
28 iso_pu_bacteria 2905999023 2906003194 217
29 2162886007 SwRhRL2b_contig_3118068 SwRhRL2b_0334.00006660 218
30 3300032004 Ga0307414_10041705 Ga0307414_100417051 218
31 3300032004 Ga0307414_10328310 Ga0307414_103283102 218
32 iso_pu_bacteria 2585428115 2587942028 218
33 iso_pu_bacteria 2738543023 2739300899 218
34 iso_pu_bacteria 2919186247 2919186291 218
35 iso_pu_bacteria 2929154850 2929155810 218
36 iso_pu_bacteria 2939664404 2939666439 218
37 iso_pu_bacteria 2977243572 2977246380 218
38 iso_pu_bacteria 2993480792 2993484430 218
39 3300005289 Ga0065704_10083251 Ga0065704_100832512 219
40 3300013102 Ga0157371_10001650 Ga0157371_100016509 219
41 3300032002 Ga0307416_100000003 Ga0307416_100000003352 219
42 iso_pu_bacteria 2585428095 2587866605 219
43 iso_pu_bacteria 2585428187 2588234076 219
44 iso_pu_bacteria 2588254257 2590614158 219
45 iso_pu_bacteria 2945924605 2945926885 219
46 iso_pu_bacteria 2945924605 2945928134 219
47 iso_pu_bacteria 2984572630 2984575117 219
48 iso_pu_bacteria 2984606641 2984608568 219
49 3300013306 Ga0163162_11605727 Ga0163162_116057271 220
50 3300048921 Ga0496118_0233840 Ga0496118_0233840_345_1007 220
51 iso_pu_bacteria 2585428182 2588209700 220
52 iso_pu_bacteria 2585428184 2588219758 220
53 iso_pu_bacteria 2816332188 2816873814 220
54 iso_pu_bacteria 2871720351 2871721728 220
55 3300005367 Ga0070667_100245599 Ga0070667_1002455992 221
56 3300009551 Ga0105238_10168264 Ga0105238_101682642 221
57 3300009553 Ga0105249_10306361 Ga0105249_103063612 221
58 3300010375 Ga0105239_10572479 Ga0105239_105724792 221
59 3300015261 Ga0182006_1000048 Ga0182006_1000048127 221
60 iso_pu_bacteria 2585428045 2587677592 221
61 iso_pu_bacteria 2588254255 2590604405 221
62 iso_pu_bacteria 2728369107 2729202765 221
63 iso_pu_bacteria 2751185877 2753672498 221
64 iso_pu_bacteria 2772190705 2772604649 221
65 iso_pu_bacteria 2889290771 2889291733 221
66 iso_pu_bacteria 2919399522 2919400226 221
67 3300003323 rootH1_10385911 rootH1_103859111 222
68 3300005288 Ga0065714_10004690 Ga0065714_100046907 222
69 3300005289 Ga0065704_10128512 Ga0065704_101285121 222
70 3300005366 Ga0070659_100446597 Ga0070659_1004465971 222
71 3300009094 Ga0111539_10163215 Ga0111539_101632152 222
72 3300013104 Ga0157370_10000068 Ga0157370_1000006896 222
73 3300013104 Ga0157370_10000392 Ga0157370_100003923 222
74 3300013104 Ga0157370_11067895 Ga0157370_110678951 222
75 3300013306 Ga0163162_10003045 Ga0163162_1000304512 222
76 3300014326 Ga0157380_10936436 Ga0157380_109364361 222
77 3300030732 Ga0316176_1204777 Ga0316176_12047778 222
78 3300046507 Ga0495606_0026590 Ga0495606_0026590_1528_2199 222
79 3300046513 Ga0495616_0045586 Ga0495616_0045586_1102_1773 222
80 3300046522 Ga0495643_0000970 Ga0495643_0000970_6251_6922 222
81 3300046525 Ga0495663_0000401 Ga0495663_0000401_8402_9073 222
82 3300048918 Ga0496115_0127906 Ga0496115_0127906_997_1668 222
83 3300049579 Ga0501043_0400660 Ga0501043_0400660_216_887 222
84 3300053090 Ga0500646_0014479 Ga0500646_0014479_801_1472 222
85 3300003323 rootH1_10035709 rootH1_100357099 223
86 3300005288 Ga0065714_10065268 Ga0065714_1006526813 223
87 3300005329 Ga0070683_100005739 Ga0070683_1000057398 223
88 3300005535 Ga0070684_100063991 Ga0070684_1000639912 223
89 3300013100 Ga0157373_10000009 Ga0157373_1000000969 223
90 3300013100 Ga0157373_10226953 Ga0157373_102269532 223
91 3300013102 Ga0157371_10000037 Ga0157371_1000003768 223
92 3300013104 Ga0157370_10003961 Ga0157370_100039617 223
93 3300013104 Ga0157370_10061052 Ga0157370_100610522 223
94 3300013105 Ga0157369_10028319 Ga0157369_100283194 223
95 3300013308 Ga0157375_10000052 Ga0157375_100000526 223
96 3300014497 Ga0182008_10000028 Ga0182008_10000028128 223
97 3300017792 Ga0163161_10059963 Ga0163161_100599633 223
98 3300025944 Ga0207661_10004274 Ga0207661_100042745 223
99 3300032004 Ga0307414_10000009 Ga0307414_10000009316 223
100 3300046507 Ga0495606_0030442 Ga0495606_0030442_1275_1949 223
101 3300046507 Ga0495606_0130818 Ga0495606_0130818_109_783 223
102 3300046538 Ga0495609_0000083 Ga0495609_0000083_10371_11045 223
103 3300046558 Ga0495633_0000562 Ga0495633_0000562_1426_2100 223
104 3300046660 Ga0495625_0009743 Ga0495625_0009743_3142_3816 223
105 3300047472 Ga0495686_0001665 Ga0495686_0001665_21981_22652 223
106 3300048925 Ga0496122_0010657 Ga0496122_0010657_5596_6267 223
107 3300048926 Ga0496123_0099771 Ga0496123_0099771_60_731 223
108 3300048928 Ga0496125_0014854 Ga0496125_0014854_5179_5850 223
109 3300005337 Ga0070682_100000175 Ga0070682_10000017538 224
110 3300005455 Ga0070663_100096760 Ga0070663_1000967602 224
111 3300025291 Ga0209675_1000263 Ga0209675_10002633 224
112 3300048905 Ga0496102_0246988 Ga0496102_0246988_783_1457 224
113 3300048919 Ga0496116_0000053 Ga0496116_0000053_212612_213286 224
114 3300048920 Ga0496117_0000050 Ga0496117_0000050_227444_228118 224
115 3300048921 Ga0496118_0000044 Ga0496118_0000044_64637_65311 224
116 3300048922 Ga0496119_0000002 Ga0496119_0000002_66815_67489 224
117 3300048925 Ga0496122_0000191 Ga0496122_0000191_64943_65617 224
118 3300048925 Ga0496122_0001730 Ga0496122_0001730_2298_2981 224
119 3300048926 Ga0496123_0000579 Ga0496123_0000579_6100_6774 224
120 3300048926 Ga0496123_0016210 Ga0496123_0016210_2205_2888 224
121 3300048927 Ga0496124_0177181 Ga0496124_0177181_484_1158 224
122 3300048928 Ga0496125_0000181 Ga0496125_0000181_2201_2884 224
123 2162886007 SwRhRL2b_contig_1420151 SwRhRL2b_0238.00004480 225
124 2162886007 SwRhRL2b_contig_2771659 SwRhRL2b_0960.00001510 225
125 3300003320 rootH2_10235473 rootH2_102354732 225
126 3300004801 Ga0058860_10133976 Ga0058860_101339761 225
127 3300005289 Ga0065704_10077041 Ga0065704_100770414 225
128 3300005289 Ga0065704_10079428 Ga0065704_100794282 225
129 3300009036 Ga0105244_10000124 Ga0105244_1000012412 225
130 3300025728 Ga0207655_1000539 Ga0207655_100053934 225
131 3300046500 Ga0495596_0002153 Ga0495596_0002153_6876_7556 225
132 3300048925 Ga0496122_0000159 Ga0496122_0000159_88376_89056 225
133 3300048925 Ga0496122_0000290 Ga0496122_0000290_85247_85927 225
134 3300048925 Ga0496122_0000465 Ga0496122_0000465_40247_40927 225

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kmf-assembly1.cif.gz_A-2 crystal structure of zalpha domain from carassius auratus pkz in complex with z-dna 0.9071 95 156
4rs8-assembly1.cif.gz_B apo structure of novel pnob8 plasmid centromere binding protein 0.9043 97 175
3hrm-assembly1.cif.gz_B crystal structure of staphylococcus aureus protein sarz in sulfenic acid form 0.9016 68 196
5h3r-assembly1.cif.gz_B crystal structure of mutant marr c80s from e.coli complexed with operator dna 0.8979 68 196
4awx-assembly1.cif.gz_B moonlighting functions of feoc in the regulation of ferrous iron transport in feo 0.8945 101 155
ID Description Score Start End Superfamily
af_Q57824_147_206_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9166 97 154 1.10.10.10
4kmfA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9071 95 156 1.10.10.10
2nnnF00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9001 63 196 1.10.10.10
af_Q59048_168_225_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8968 99 156 1.10.10.10
af_Q58948_3_81_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8964 94 172 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A645H1S9-F1-model_v4 HTH marR-type domain-containing protein 0.948 72 215 GO:0003677
GO:0003700
AF-A0A511DAK4-F1-model_v4 HTH marR-type domain-containing protein 0.9281 72 198 GO:0003700
AF-A0A839DWC8-F1-model_v4 DNA-binding MarR family transcriptional regulator 0.9239 62 196 GO:0003677
GO:0003700
AF-B9TG12-F1-model_v4 Transcriptional regulator hosA, putative 0.9238 69 196 GO:0003700
GO:0006355
GO:0006950
AF-A0A558A450-F1-model_v4 MarR family transcriptional regulator 0.9155 70 177 GO:0003700
GO:0006950

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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