F160463

General Info

Members Datasets Scaffolds Average Seq Length
134 67 134 520

Family's Representative Sequence

Representative Sequence 3300032139|Ga0316580_10007265|Ga0316580_100072652
Length 567
Sequence MQRQRRRQKNTYWKQGDMKEKSASGRFLRELLAEWETEVSGSSLPAPPKYDGPDIWISHLTEKSSEVTPGACFVARVRATSDGHPYIPQAVNNGASVILAQKPIENIAAHLPDGIIYLKVPDTSLASAWFAAAWEGFPSRELVVIGITGTDGKTSTANILLEMLLSAGIRTGLLSTTRAVIGIEEEPLALHVTTPEAPVIQRHLRRMVDAGLTHCILETTSHGLSQNRVGAIDFDVAVVTNVTHEHLDYHGDYNSYLSAKARLFEAISGSLWPVASSNPAKQSQLKTAVLNQDDGSYNRLSDIGAARQISYGIYSAADIKAGEISYGHSHTDFMMQFADRLSPEGPAQVFMSSPLIGEFNVYNSLAATGAALAVGAGVAAIREGLRRIDSIDGRMEQIDRGQPFTVIVDFAHTPNALSQAIEAARTMTTGRVITVFGSAGKRDVEKRTRMAQISTRYADLTIFTAEDPRTDSLEEILEVMASGSLGDGGIEGQTFWRVPDRGKAIYFALSLAEPGDLVLICGKGHEQSMCFGVVEYPWDDRQATERALDALANNEPMPDLGLPTFKD

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
13 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
14 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
15 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
16 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
17 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
18 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
19 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
20 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
26 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
27 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
28 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
29 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
30 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
31 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
32 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
33 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
34 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
35 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
36 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
37 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
38 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
39 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
40 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
41 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
42 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
43 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
44 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
45 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
46 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
47 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
48 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
49 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
52 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
53 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
54 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
55 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
59 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
60 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
62 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
63 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
64 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
65 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
66 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
67 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.51
Metatranscriptomes 1.49
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 96.27
Stem 0
Stem Tuber 0
Unclassified 3.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10005412 3300003203 Bacteria 5922
2 rootH1_10030376 3300003323 Bacteria 3837
3 Ga0065707_10116984 3300005295 Bacteria 2223
4 Ga0070691_10003649 3300005341 Bacteria 6949
5 Ga0070706_100000642 3300005467 Bacteria 39984
6 Ga0070706_100002223 3300005467 Bacteria 19727
7 Ga0070706_100003345 3300005467 Bacteria 15812
8 Ga0070707_100001968 3300005468 Bacteria 19654
9 Ga0070707_100057805 3300005468 Bacteria 3721
10 Ga0070707_100151252 3300005468 Bacteria 2260
11 Ga0070698_100019676 3300005471 Bacteria 7082
12 Ga0070698_100038386 3300005471 Bacteria 4934
13 Ga0070698_100087179 3300005471 Bacteria 3108
14 Ga0070698_100140234 3300005471 Unclassified 2369
15 Ga0070699_100005723 3300005518 Bacteria 10879
16 Ga0070699_100006713 3300005518 Bacteria 10009
17 Ga0070699_100025465 3300005518 Bacteria 5100
18 Ga0070684_100131452 3300005535 Bacteria 2258
19 Ga0070697_100029150 3300005536 Unclassified 4423
20 Ga0070697_100065208 3300005536 Bacteria 2976
21 Ga0070717_10008061 3300006028 Bacteria 7853
22 Ga0070717_10016485 3300006028 Bacteria 5729
23 Ga0075431_100009441 3300006847 Bacteria 9792
24 Ga0075429_100068725 3300006880 Bacteria 3083
25 Ga0075429_100086760 3300006880 Bacteria 2728
26 Ga0075429_100105670 3300006880 Bacteria 2459
27 Ga0114129_10065539 3300009147 Bacteria 5069
28 Ga0105249_10015822 3300009553 Bacteria 6684
29 Ga0105239_10286067 3300010375 Bacteria 1856
30 Ga0206352_10252254 3300020078 Bacteria 6614
31 Ga0206350_10720179 3300020080 Bacteria 4763
32 Ga0213874_10000573 3300021377 Bacteria 7352
33 Ga0207684_10000277 3300025910 Bacteria 75289
34 Ga0207684_10001779 3300025910 Bacteria 22697
35 Ga0207684_10020427 3300025910 Bacteria 5658
36 Ga0207646_10003017 3300025922 Bacteria 19389
37 Ga0207646_10004295 3300025922 Bacteria 15554
38 Ga0207661_10101099 3300025944 Bacteria 2421
39 Ga0207712_10005144 3300025961 Bacteria 8277
40 Ga0207674_10006623 3300026116 Bacteria 13610
41 Ga0265318_10014875 3300028577 Unclassified 3255
42 Ga0265327_10022087 3300031251 Bacteria 3819
43 Ga0265316_10064934 3300031344 Unclassified 2827
44 Ga0316575_10008197 3300031665 Bacteria 3800
45 Ga0316579_10000266 3300031691 Bacteria 16007
46 Ga0316579_10005266 3300031691 Bacteria 5208
47 Ga0316579_10009360 3300031691 Bacteria 4117
48 Ga0316579_10010669 3300031691 Unclassified 3889
49 Ga0316576_10003890 3300031727 Bacteria 8847
50 Ga0316576_10005384 3300031727 Bacteria 7810
51 Ga0316576_10014705 3300031727 Bacteria 5232
52 Ga0316578_10001429 3300031728 Bacteria 9683
53 Ga0316578_10009698 3300031728 Unclassified 4960
54 Ga0316578_10037659 3300031728 Unclassified 2786
55 Ga0316578_10047908 3300031728 Bacteria 2495
56 Ga0316577_10003352 3300031733 Bacteria 8082
57 Ga0316577_10015085 3300031733 Bacteria 4247
58 Ga0316577_10027172 3300031733 Bacteria 3190
59 Ga0316577_10043836 3300031733 Unclassified 2502
60 Ga0316577_10047030 3300031733 Unclassified 2409
61 Ga0316583_10000186 3300032133 Bacteria 16009
62 Ga0316585_10000110 3300032137 Bacteria 15059
63 Ga0316580_10000073 3300032139 Bacteria 17222
64 Ga0316580_10007265 3300032139 Unclassified 3295
65 Ga0316574_0000752 3300035398 Bacteria 13938
66 Ga0316574_0000814 3300035398 Bacteria 13573
67 Ga0316574_0001265 3300035398 Bacteria 11797
68 Ga0316574_0040044 3300035398 Bacteria 2884
69 Ga0316574_0044784 3300035398 Unclassified 2738
70 Ga0373937_0072162 3300036401 Bacteria 3184
71 Ga0316582_0001001 3300036647 Bacteria 11785
72 Ga0316582_0003589 3300036647 Bacteria 7644
73 Ga0316582_0005718 3300036647 Bacteria 6447
74 Ga0316582_0018902 3300036647 Bacteria 4021
75 Ga0316582_0067008 3300036647 Unclassified 2315
76 Ga0316584_0005444 3300036712 Bacteria 8542
77 Ga0316584_0077468 3300036712 Bacteria 2490
78 Ga0316584_0104805 3300036712 Bacteria 2116
79 Ga0316584_0141154 3300036712 Bacteria 1796
80 Ga0395898_0024407 3300037466 Bacteria 6098
81 Ga0316581_0006304 3300037588 Bacteria 3132
82 Ga0316581_0007593 3300037588 Bacteria 2917
83 Ga0400489_13750 3300039093 Bacteria 4667
84 Ga0436363_0754088 3300039450 Bacteria 4618
85 Ga0436363_1651833 3300039450 Bacteria 23162
86 Ga0436362_0485792 3300039453 Bacteria 9082
87 Ga0451577_0075462 3300042876 Bacteria 3006
88 Ga0451577_0104531 3300042876 Bacteria 2531
89 Ga0451577_0192243 3300042876 Bacteria 1841
90 Ga0466969_0026889 3300044656 Bacteria 2949
91 Ga0466969_0035124 3300044656 Bacteria 2536
92 Ga0466972_0029510 3300044658 Bacteria 2700
93 Ga0453683_0001906 3300044673 Bacteria 17023
94 Ga0453683_0007741 3300044673 Bacteria 7266
95 Ga0453683_0009035 3300044673 Bacteria 6657
96 Ga0453683_0075023 3300044673 Bacteria 2117
97 Ga0466966_0000247 3300044684 Bacteria 35908
98 Ga0466966_0011418 3300044684 Bacteria 5891
99 Ga0466961_0007728 3300044693 Bacteria 6846
100 Ga0466964_0000087 3300044706 Bacteria 21632
101 Ga0453684_0000007 3300044712 Bacteria 1301482
102 Ga0453684_0000021 3300044712 Bacteria 873490
103 Ga0453684_0001060 3300044712 Bacteria 87515
104 Ga0453684_0001701 3300044712 Bacteria 59250
105 Ga0453684_0001784 3300044712 Bacteria 57313
106 Ga0453684_0003979 3300044712 Bacteria 32271
107 Ga0453684_0004211 3300044712 Bacteria 30898
108 Ga0453684_0013661 3300044712 Bacteria 13155
109 Ga0453684_0023321 3300044712 Bacteria 9125
110 Ga0453684_0028028 3300044712 Bacteria 8052
111 Ga0453684_0037626 3300044712 Bacteria 6638
112 Ga0453684_0058553 3300044712 Bacteria 4975
113 Ga0453684_0071016 3300044712 Bacteria 4405
114 Ga0453684_0151821 3300044712 Bacteria 2751
115 Ga0453684_0156824 3300044712 Bacteria 2698
116 Ga0453684_0237737 3300044712 Unclassified 2099
117 Ga0466968_0002374 3300044735 Bacteria 6891
118 Ga0466970_0000162 3300044765 Bacteria 32000
119 Ga0466957_0019171 3300044842 Bacteria 4023
120 Ga0466959_0007219 3300045049 Bacteria 7785
121 Ga0466959_0033926 3300045049 Bacteria 3775
122 Ga0451576_0000009 3300045051 Bacteria 712666
123 Ga0451576_0009786 3300045051 Bacteria 11081
124 Ga0466967_0106160 3300045976 Bacteria 2574
125 Ga0495674_0066418 3300047319 Bacteria 3129
126 Ga0501037_0016123 3300049573 Bacteria 5500
127 Ga0501073_0003827 3300049589 Bacteria 11288
128 Ga0501044_0049373 3300049823 Bacteria 4344
129 nmdc:mga09592_45812_c1 3300050508 Unclassified 3684
130 nmdc:mga09592_76683_c1 3300050508 Bacteria 2843
131 nmdc:mga06r32_6797_c1 3300050510 Bacteria 10281
132 nmdc:mga0a205_20720_c1 3300050515 Bacteria 6209
133 Ga0501084_0031813 3300054114 Bacteria 4411
134 Ga0530510_0031415 3300061734 Bacteria 3818

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005535 Ga0070684_100131452 Ga0070684_1001314522 474
2 3300045976 Ga0466967_0106160 Ga0466967_0106160_639_2201 484
3 3300005468 Ga0070707_100057805 Ga0070707_1000578052 487
4 3300005518 Ga0070699_100005723 Ga0070699_1000057232 487
5 3300005536 Ga0070697_100029150 Ga0070697_1000291502 487
6 3300006028 Ga0070717_10016485 Ga0070717_100164853 487
7 3300025922 Ga0207646_10004295 Ga0207646_1000429513 487
8 3300005467 Ga0070706_100002223 Ga0070706_1000022239 490
9 3300025910 Ga0207684_10001779 Ga0207684_1000177911 490
10 3300025944 Ga0207661_10101099 Ga0207661_101010991 491
11 3300036401 Ga0373937_0072162 Ga0373937_0072162_1375_2895 491
12 3300047319 Ga0495674_0066418 Ga0495674_0066418_749_2269 491
13 3300035398 Ga0316574_0044784 Ga0316574_0044784_12_1493 493
14 3300003323 rootH1_10030376 rootH1_100303762 498
15 3300005467 Ga0070706_100003345 Ga0070706_1000033456 498
16 3300005468 Ga0070707_100001968 Ga0070707_1000019685 498
17 3300005518 Ga0070699_100006713 Ga0070699_1000067133 498
18 3300005536 Ga0070697_100065208 Ga0070697_1000652082 498
19 3300006028 Ga0070717_10008061 Ga0070717_100080615 498
20 3300010375 Ga0105239_10286067 Ga0105239_102860671 498
21 3300025910 Ga0207684_10020427 Ga0207684_100204273 498
22 3300025922 Ga0207646_10003017 Ga0207646_100030176 498
23 3300044842 Ga0466957_0019171 Ga0466957_0019171_1888_3405 498
24 3300049573 Ga0501037_0016123 Ga0501037_0016123_2530_4047 498
25 3300049823 Ga0501044_0049373 Ga0501044_0049373_264_1781 498
26 3300020078 Ga0206352_10252254 Ga0206352_102522543 499
27 3300020080 Ga0206350_10720179 Ga0206350_107201792 499
28 3300044656 Ga0466969_0026889 Ga0466969_0026889_1192_2715 499
29 3300044658 Ga0466972_0029510 Ga0466972_0029510_323_1846 499
30 3300044693 Ga0466961_0007728 Ga0466961_0007728_3183_4706 499
31 3300021377 Ga0213874_10000573 Ga0213874_100005735 500
32 3300037466 Ga0395898_0024407 Ga0395898_0024407_86_1642 500
33 3300039450 Ga0436363_0754088 Ga0436363_0754088_285_1808 500
34 3300039450 Ga0436363_1651833 Ga0436363_1651833_2903_4426 500
35 3300039453 Ga0436362_0485792 Ga0436362_0485792_660_2183 500
36 3300044656 Ga0466969_0035124 Ga0466969_0035124_403_1929 500
37 3300044684 Ga0466966_0000247 Ga0466966_0000247_19072_20595 500
38 3300044684 Ga0466966_0011418 Ga0466966_0011418_2948_4474 500
39 3300044706 Ga0466964_0000087 Ga0466964_0000087_8876_10399 500
40 3300044735 Ga0466968_0002374 Ga0466968_0002374_1153_2676 500
41 3300044765 Ga0466970_0000162 Ga0466970_0000162_11310_12833 500
42 3300045049 Ga0466959_0007219 Ga0466959_0007219_4106_5629 500
43 3300045049 Ga0466959_0033926 Ga0466959_0033926_1295_2821 500
44 3300036712 Ga0316584_0141154 Ga0316584_0141154_34_1626 501
45 3300042876 Ga0451577_0075462 Ga0451577_0075462_1474_2991 502
46 3300005341 Ga0070691_10003649 Ga0070691_100036492 503
47 3300026116 Ga0207674_10006623 Ga0207674_100066239 503
48 3300036647 Ga0316582_0003589 Ga0316582_0003589_4362_5885 503
49 3300005471 Ga0070698_100087179 Ga0070698_1000871792 504
50 3300005471 Ga0070698_100140234 Ga0070698_1001402342 504
51 3300032133 Ga0316583_10000186 Ga0316583_100001862 504
52 3300032137 Ga0316585_10000110 Ga0316585_1000011010 504
53 3300032139 Ga0316580_10000073 Ga0316580_1000007311 504
54 3300035398 Ga0316574_0000752 Ga0316574_0000752_11412_13058 504
55 3300036647 Ga0316582_0018902 Ga0316582_0018902_485_2131 504
56 3300037588 Ga0316581_0007593 Ga0316581_0007593_390_2036 504
57 3300031733 Ga0316577_10047030 Ga0316577_100470301 505
58 3300061734 Ga0530510_0031415 Ga0530510_0031415_1372_2919 506
59 3300006847 Ga0075431_100009441 Ga0075431_1000094414 507
60 3300031728 Ga0316578_10001429 Ga0316578_1000142912 507
61 3300036647 Ga0316582_0001001 Ga0316582_0001001_3640_5202 507
62 3300050510 nmdc:mga06r32_6797_c1 nmdc:mga06r32_6797_c1_7030_8754 507
63 3300005467 Ga0070706_100000642 Ga0070706_10000064233 508
64 3300005471 Ga0070698_100019676 Ga0070698_1000196766 508
65 3300025910 Ga0207684_10000277 Ga0207684_1000027764 508
66 3300049589 Ga0501073_0003827 Ga0501073_0003827_8756_10288 509
67 3300054114 Ga0501084_0031813 Ga0501084_0031813_2791_4323 509
68 3300031691 Ga0316579_10009360 Ga0316579_100093603 512
69 3300031733 Ga0316577_10027172 Ga0316577_100271723 512
70 3300031733 Ga0316577_10043836 Ga0316577_100438362 512
71 3300009147 Ga0114129_10065539 Ga0114129_100655392 513
72 3300031728 Ga0316578_10047908 Ga0316578_100479082 513
73 3300039093 Ga0400489_13750 Ga0400489_13750_2817_4394 513
74 3300036647 Ga0316582_0005718 Ga0316582_0005718_4191_5738 514
75 3300044712 Ga0453684_0001784 Ga0453684_0001784_227_1804 514
76 3300031691 Ga0316579_10005266 Ga0316579_100052663 515
77 3300031691 Ga0316579_10010669 Ga0316579_100106693 515
78 3300031727 Ga0316576_10005384 Ga0316576_100053845 515
79 3300031727 Ga0316576_10014705 Ga0316576_100147052 515
80 3300031728 Ga0316578_10009698 Ga0316578_100096984 515
81 3300031728 Ga0316578_10037659 Ga0316578_100376592 515
82 3300032139 Ga0316580_10007265 Ga0316580_100072652 515
83 3300035398 Ga0316574_0040044 Ga0316574_0040044_1009_2661 515
84 3300036712 Ga0316584_0077468 Ga0316584_0077468_494_2146 515
85 3300036712 Ga0316584_0104805 Ga0316584_0104805_74_1726 515
86 3300044712 Ga0453684_0001060 Ga0453684_0001060_71574_73154 515
87 3300031691 Ga0316579_10000266 Ga0316579_100002668 516
88 3300031727 Ga0316576_10003890 Ga0316576_100038905 516
89 3300031733 Ga0316577_10015085 Ga0316577_100150852 516
90 3300035398 Ga0316574_0001265 Ga0316574_0001265_6917_8488 516
91 3300036647 Ga0316582_0067008 Ga0316582_0067008_225_1796 516
92 3300036712 Ga0316584_0005444 Ga0316584_0005444_371_1942 516
93 3300037588 Ga0316581_0006304 Ga0316581_0006304_1450_3021 516
94 3300045051 Ga0451576_0000009 Ga0451576_0000009_592767_594320 517
95 3300031733 Ga0316577_10003352 Ga0316577_100033523 518
96 3300035398 Ga0316574_0000814 Ga0316574_0000814_8381_9937 518
97 3300044673 Ga0453683_0009035 Ga0453683_0009035_4363_5922 518
98 3300044673 Ga0453683_0075023 Ga0453683_0075023_129_1688 518
99 3300044712 Ga0453684_0003979 Ga0453684_0003979_10477_12042 518
100 3300044712 Ga0453684_0071016 Ga0453684_0071016_263_1825 518
101 3300045051 Ga0451576_0009786 Ga0451576_0009786_6460_8019 518
102 3300042876 Ga0451577_0192243 Ga0451577_0192243_215_1780 519
103 3300044712 Ga0453684_0000021 Ga0453684_0000021_51562_53127 519
104 3300044712 Ga0453684_0001701 Ga0453684_0001701_123_1697 519
105 3300044712 Ga0453684_0151821 Ga0453684_0151821_103_1677 519
106 3300031251 Ga0265327_10022087 Ga0265327_100220873 520
107 3300044712 Ga0453684_0037626 Ga0453684_0037626_2447_4012 521
108 3300031665 Ga0316575_10008197 Ga0316575_100081973 522
109 3300044712 Ga0453684_0004211 Ga0453684_0004211_5632_7200 522
110 3300044712 Ga0453684_0013661 Ga0453684_0013661_1102_2673 523
111 3300044712 Ga0453684_0023321 Ga0453684_0023321_3993_5567 523
112 3300044712 Ga0453684_0028028 Ga0453684_0028028_4288_5862 523
113 3300044712 Ga0453684_0058553 Ga0453684_0058553_190_1770 523
114 3300044712 Ga0453684_0237737 Ga0453684_0237737_367_1941 523
115 3300044712 Ga0453684_0000007 Ga0453684_0000007_909129_910712 524
116 3300005295 Ga0065707_10116984 Ga0065707_101169842 525
117 3300006880 Ga0075429_100086760 Ga0075429_1000867602 525
118 3300006880 Ga0075429_100105670 Ga0075429_1001056702 525
119 3300009553 Ga0105249_10015822 Ga0105249_100158228 525
120 3300025961 Ga0207712_10005144 Ga0207712_100051448 525
121 3300050508 nmdc:mga09592_45812_c1 nmdc:mga09592_45812_c1_244_1827 525
122 3300050508 nmdc:mga09592_76683_c1 nmdc:mga09592_76683_c1_224_1801 525
123 3300028577 Ga0265318_10014875 Ga0265318_100148753 526
124 3300031344 Ga0265316_10064934 Ga0265316_100649342 526
125 3300042876 Ga0451577_0104531 Ga0451577_0104531_885_2507 526
126 3300044673 Ga0453683_0001906 Ga0453683_0001906_6934_8520 526
127 3300044673 Ga0453683_0007741 Ga0453683_0007741_4990_6576 526
128 3300005518 Ga0070699_100025465 Ga0070699_1000254653 527
129 3300044712 Ga0453684_0156824 Ga0453684_0156824_322_1950 527
130 3300003203 JGI25406J46586_10005412 JGI25406J46586_100054124 528
131 3300005468 Ga0070707_100151252 Ga0070707_1001512522 528
132 3300005471 Ga0070698_100038386 Ga0070698_1000383863 528
133 3300006880 Ga0075429_100068725 Ga0075429_1000687251 528
134 3300050515 nmdc:mga0a205_20720_c1 nmdc:mga0a205_20720_c1_3774_5405 528

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

393

524

0.95

PF08245

Mur_ligase_M

Mur ligase middle domain

147

371

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.9232 6 500
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.9052 6 500
1e8c-assembly1.cif.gz_A structure of mure the udp-n-acetylmuramyl tripeptide synthetase from e. coli 0.8938 5 506
1e8c-assembly1.cif.gz_A structure of mure the udp-n-acetylmuramyl tripeptide synthetase from e. coli 0.8869 5 506
4bub-assembly1.cif.gz_A crystal structure of mure ligase from thermotoga maritima in complex with adp 0.883 11 503
ID Description Score Start End Superfamily
2wtzA03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9378 343 499 3.90.190.20
1e8cB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.936 346 492 3.90.190.20
1e8cB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9295 346 492 3.90.190.20
4c13A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.922 103 344 3.40.1190.10
2wtzD03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9216 356 494 3.90.190.20
ID Description Score Start End GO Terms
AF-A0A0P6X978-F1-model_v4 UDP-N-acetylmuramyl-tripeptide synthetase (EC 6.3.2.-) (UDP-MurNAc-tripeptide synthetase) 0.9758 15 514 GO:0000287
GO:0005524
GO:0005737
GO:0008360
GO:0009252
GO:0016881
GO:0051301
GO:0071555
AF-A0A1V6EQR8-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase (EC 6.3.2.13) 0.973 400 501 GO:0008765
GO:0009058
AF-A0A535C167-F1-model_v4 Mur ligase C-terminal domain-containing protein 0.9708 362 501 GO:0009058
GO:0016881
AF-A0A2M8L5U3-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9687 300 411 GO:0005524
GO:0009058
GO:0016881
AF-A0A7Z9WIS4-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9662 6 377 GO:0005524
GO:0005737
GO:0008360
GO:0009252
GO:0016881
GO:0051301

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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