F166876

General Info

Members Datasets Scaffolds Average Seq Length
136 108 115 322

Family's Representative Sequence

Representative Sequence 3300026075|Ga0207708_10000019|Ga0207708_1000001989
Length 366
Sequence VTEQGLCRPDDVRRVGARTTTTDPPKTTEDLNCDRRATTVASGWRAMRRRILTPSTSEADLSVRGFHEKTPEARQMLETVGRTFLTGYGLAAEARLPADAEQRLEELPWQIRGFAYEGAAMGFAIRDALPFGGNHLKGFLQGRASNHVYMVYVGVGLALARMPRIRWAKGAVAAEDPVLRWLVLDGYGFHQGYFHTDHYVRQQYREPNFPWPIGAPSGYADRVIDQGLGRAIWFVSGTDPERAADLIDAFDQARHPDLYAGVGLAATYAGGVDEHELRVLIERAGRYQPELAQGSVFAAAARYEADLVTPHTLLAADMLCGLTPQQASALAAQTRVGLSDDGAVPSYELWRHRIASEVGELRRGAS

Samples

Sample ID Description Type Environment
1 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
2 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
3 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
4 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
5 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
6 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
7 2643221548 Streptomyces sp. Root55 Isolate Unclassified
8 2643221578 Streptomyces sp. Root63 Isolate Unclassified
9 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
10 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
11 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
12 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
13 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
14 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
15 2855683550 Micromonospora sp. RP3T Isolate Unclassified
16 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
17 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
18 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
19 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
20 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
21 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
22 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
23 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
24 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
25 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
26 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
27 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
65 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
66 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
67 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
68 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
69 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
70 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
71 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
72 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
75 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
76 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
77 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
78 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
79 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
80 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
81 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
82 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
83 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
84 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
85 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
86 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
87 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
88 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
89 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
99 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
100 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
101 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
102 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
103 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
104 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
105 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
106 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
107 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
108 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.56
Metatranscriptomes 0
Isolates 15.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.94
Nodule 0
Rhizoplane 3.68
Rhizosphere 73.53
Stem 0
Stem Tuber 0
Unclassified 19.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10104221 3300003320 Bacteria 13348
2 rootH1_10073969 3300003323 Bacteria 1560
3 Ga0070683_100026484 3300005329 Bacteria 5222
4 Ga0070680_100094113 3300005336 Unclassified 2483
5 Ga0068868_100075947 3300005338 Unclassified 2686
6 Ga0070673_100339785 3300005364 Bacteria 1330
7 Ga0070714_100000008 3300005435 Bacteria 278734
8 Ga0070714_100441447 3300005435 Bacteria 1235
9 Ga0070700_100000004 3300005441 Bacteria 245987
10 Ga0070700_100056638 3300005441 Bacteria 2458
11 Ga0070663_100000200 3300005455 Bacteria 29769
12 Ga0070681_10117419 3300005458 Bacteria 2597
13 Ga0070681_10231478 3300005458 Bacteria 1762
14 Ga0070684_100032348 3300005535 Bacteria 4457
15 Ga0068853_100014840 3300005539 Bacteria 6397
16 Ga0070693_100007596 3300005547 Bacteria 5307
17 Ga0070693_100047855 3300005547 Unclassified 2434
18 Ga0070693_100077208 3300005547 Bacteria 1976
19 Ga0068856_100008958 3300005614 Bacteria 9736
20 Ga0068852_100217072 3300005616 Unclassified 1817
21 Ga0081539_10000414 3300005985 Bacteria 91060
22 Ga0081539_10010576 3300005985 Bacteria 7465
23 Ga0070717_10165982 3300006028 Bacteria 1918
24 Ga0075428_100049265 3300006844 Bacteria 4622
25 Ga0075430_100012159 3300006846 Bacteria 7329
26 Ga0075431_100005467 3300006847 Bacteria 12552
27 Ga0075431_100063730 3300006847 Bacteria 3804
28 Ga0075429_100000772 3300006880 Bacteria 25204
29 Ga0105240_10021282 3300009093 Bacteria 8628
30 Ga0105240_10291858 3300009093 Bacteria 1869
31 Ga0105240_10567225 3300009093 Bacteria 1254
32 Ga0105245_10000333 3300009098 Bacteria 44397
33 Ga0105245_10005649 3300009098 Bacteria 10992
34 Ga0114129_10000594 3300009147 Bacteria 44664
35 Ga0105241_10440496 3300009174 Bacteria 1151
36 Ga0105237_10112626 3300009545 Plasmid 2713
37 Ga0105238_10028206 3300009551 Bacteria 5719
38 Ga0105238_10086667 3300009551 Bacteria 3119
39 Ga0105238_10130009 3300009551 Bacteria 2496
40 Ga0105239_10090422 3300010375 Bacteria 3377
41 Ga0157378_10031812 3300013297 Bacteria 4660
42 Ga0157372_10000652 3300013307 Bacteria 38133
43 Ga0157372_10655871 3300013307 Bacteria 1222
44 Ga0213875_10045674 3300021388 Bacteria 2056
45 Ga0207707_10102683 3300025912 Bacteria 2499
46 Ga0207695_10159934 3300025913 Bacteria 2184
47 Ga0207694_10059480 3300025924 Bacteria 2972
48 Ga0207694_10068856 3300025924 Bacteria 2764
49 Ga0207687_10000297 3300025927 Bacteria 34093
50 Ga0207687_10069536 3300025927 Bacteria 2511
51 Ga0207664_10000002 3300025929 Bacteria 657053
52 Ga0207664_10191516 3300025929 Bacteria 1761
53 Ga0207661_10014970 3300025944 Bacteria 5695
54 Ga0207661_10025483 3300025944 Unclassified 4496
55 Ga0207667_10595120 3300025949 Bacteria 1116
56 Ga0207639_10080855 3300026041 Plasmid 2572
57 Ga0207639_10207334 3300026041 Bacteria 1685
58 Ga0207678_10000087 3300026067 Bacteria 76296
59 Ga0207708_10000008 3300026075 Bacteria 245837
60 Ga0207708_10000019 3300026075 Bacteria 187745
61 Ga0207708_10160466 3300026075 Bacteria 1775
62 Ga0207702_10132037 3300026078 Bacteria 2248
63 Ga0207674_10171041 3300026116 Unclassified 2126
64 Ga0207698_10025027 3300026142 Bacteria 4198
65 Ga0307515_10000032 3300028794 Bacteria 358317
66 Ga0307515_10015336 3300028794 Bacteria 14124
67 Ga0307515_10032893 3300028794 Bacteria 8565
68 Ga0307512_10040162 3300030522 Bacteria 3909
69 Ga0307509_10170078 3300031507 Bacteria 2060
70 Ga0307509_10253171 3300031507 Bacteria 1543
71 Ga0307508_10081176 3300031616 Bacteria 2824
72 Ga0307516_10007175 3300031730 Bacteria 12864
73 Ga0307516_10035152 3300031730 Bacteria 5029
74 Ga0307518_10000218 3300031838 Bacteria 43271
75 Ga0326468_10003187 3300031889 Bacteria 1383
76 Ga0307507_10021217 3300033179 Bacteria 7239
77 Ga0307507_10152818 3300033179 Bacteria 1731
78 Ga0373951_0000286 3300035091 Bacteria 16151
79 Ga0373935_0048283 3300035692 Bacteria 2695
80 Ga0436364_1013465 3300037853 Bacteria 7181
81 Ga0466972_0001195 3300044658 Bacteria 12488
82 Ga0466965_0037409 3300044683 Bacteria 2383
83 Ga0466961_0001497 3300044693 Bacteria 14491
84 Ga0466968_0000312 3300044735 Bacteria 15609
85 Ga0466960_0004370 3300044901 Bacteria 5519
86 Ga0466959_0251181 3300045049 Unclassified 1220
87 Ga0495651_0032813 3300046462 Bacteria 4050
88 Ga0495594_0053702 3300046499 Bacteria 2220
89 Ga0495606_0002986 3300046507 Bacteria 18594
90 Ga0495623_0019898 3300046679 Bacteria 4340
91 Ga0496100_0068084 3300048903 Bacteria 2367
92 Ga0496103_0153228 3300048906 Bacteria 1477
93 Ga0496105_0006804 3300048908 Bacteria 8795
94 Ga0496109_0501416 3300048912 Bacteria 1146
95 Ga0496112_0161120 3300048915 Bacteria 2210
96 Ga0501032_0002315 3300049569 Bacteria 14939
97 Ga0501034_0051427 3300049571 Bacteria 4154
98 Ga0501036_0039382 3300049572 Bacteria 3999
99 Ga0501038_0017395 3300049574 Bacteria 6498
100 Ga0501043_0012379 3300049579 Bacteria 6672
101 Ga0501047_0025647 3300049581 Bacteria 5668
102 Ga0501035_0031047 3300049822 Bacteria 4866
103 Ga0501044_0033896 3300049823 Bacteria 5360
104 nmdc:mga05p37_142961_c1 3300050507 Bacteria 2931
105 nmdc:mga05p37_17854_c1 3300050507 Bacteria 8564
106 nmdc:mga0qj67_120751_c1 3300050509 Bacteria 2120
107 nmdc:mga06r32_180_c2 3300050510 Bacteria 21312
108 nmdc:mga06r32_22136_c2 3300050510 Bacteria 3846
109 Ga0495612_0011271 3300053078 Bacteria 3605
110 Ga0495612_0037311 3300053078 Bacteria 1973
111 Ga0500583_0008606 3300053092 Bacteria 3674
112 Ga0500641_0010586 3300053096 Bacteria 3336
113 Ga0500573_0015263 3300053140 Bacteria 4352
114 Ga0500588_0031266 3300053146 Bacteria 1534
115 Ga0530510_0015464 3300061734 Bacteria 5393

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2852635781 2852642269 259
2 3300048915 Ga0496112_0161120 Ga0496112_0161120_1152_2045 292
3 3300045049 Ga0466959_0251181 Ga0466959_0251181_182_1117 293
4 3300044735 Ga0466968_0000312 Ga0466968_0000312_4499_5401 300
5 3300005985 Ga0081539_10000414 Ga0081539_1000041444 301
6 3300005985 Ga0081539_10010576 Ga0081539_100105762 301
7 3300006847 Ga0075431_100005467 Ga0075431_10000546714 301
8 3300033179 Ga0307507_10152818 Ga0307507_101528182 303
9 3300031616 Ga0307508_10081176 Ga0307508_100811762 305
10 3300053092 Ga0500583_0008606 Ga0500583_0008606_1480_2445 305
11 3300053096 Ga0500641_0010586 Ga0500641_0010586_1917_2882 305
12 3300053146 Ga0500588_0031266 Ga0500588_0031266_74_1039 305
13 3300005338 Ga0068868_100075947 Ga0068868_1000759472 306
14 3300005535 Ga0070684_100032348 Ga0070684_1000323482 306
15 3300005547 Ga0070693_100007596 Ga0070693_1000075965 306
16 3300005547 Ga0070693_100047855 Ga0070693_1000478552 306
17 3300005614 Ga0068856_100008958 Ga0068856_1000089583 306
18 3300005616 Ga0068852_100217072 Ga0068852_1002170722 306
19 3300009098 Ga0105245_10000333 Ga0105245_1000033324 306
20 3300009098 Ga0105245_10005649 Ga0105245_100056492 306
21 3300009174 Ga0105241_10440496 Ga0105241_104404961 306
22 3300009545 Ga0105237_10112626 Ga0105237_101126263 306
23 3300009551 Ga0105238_10028206 Ga0105238_100282063 306
24 3300010375 Ga0105239_10090422 Ga0105239_100904224 306
25 3300013297 Ga0157378_10031812 Ga0157378_100318122 306
26 3300025927 Ga0207687_10000297 Ga0207687_1000029722 306
27 3300025927 Ga0207687_10069536 Ga0207687_100695362 306
28 3300026041 Ga0207639_10080855 Ga0207639_100808552 306
29 3300026078 Ga0207702_10132037 Ga0207702_101320372 306
30 3300026142 Ga0207698_10025027 Ga0207698_100250274 306
31 3300048903 Ga0496100_0068084 Ga0496100_0068084_706_1668 306
32 3300048906 Ga0496103_0153228 Ga0496103_0153228_433_1395 306
33 3300048908 Ga0496105_0006804 Ga0496105_0006804_3040_4002 306
34 iso_pu_bacteria 2831935698 2831938991 307
35 iso_pu_bacteria 2855683550 2855686506 307
36 3300009093 Ga0105240_10567225 Ga0105240_105672252 308
37 3300009551 Ga0105238_10086667 Ga0105238_100866672 308
38 3300009551 Ga0105238_10130009 Ga0105238_101300092 308
39 3300037853 Ga0436364_1013465 Ga0436364_1013465_241_1167 308
40 3300053078 Ga0495612_0011271 Ga0495612_0011271_1619_2599 308
41 iso_pu_bacteria 2585427649 2586063354 308
42 iso_pu_bacteria 2808606522 2809587486 308
43 iso_pu_bacteria 2915768154 2915775081 308
44 3300005329 Ga0070683_100026484 Ga0070683_1000264844 309
45 3300005336 Ga0070680_100094113 Ga0070680_1000941132 309
46 3300005458 Ga0070681_10117419 Ga0070681_101174192 309
47 3300005458 Ga0070681_10231478 Ga0070681_102314782 309
48 3300005547 Ga0070693_100077208 Ga0070693_1000772082 309
49 3300006028 Ga0070717_10165982 Ga0070717_101659822 309
50 3300006847 Ga0075431_100063730 Ga0075431_1000637303 309
51 3300009093 Ga0105240_10291858 Ga0105240_102918582 309
52 3300013307 Ga0157372_10655871 Ga0157372_106558712 309
53 3300025912 Ga0207707_10102683 Ga0207707_101026832 309
54 3300025944 Ga0207661_10014970 Ga0207661_100149704 309
55 3300025944 Ga0207661_10025483 Ga0207661_100254833 309
56 3300026116 Ga0207674_10171041 Ga0207674_101710412 309
57 3300035692 Ga0373935_0048283 Ga0373935_0048283_25_1008 309
58 3300046679 Ga0495623_0019898 Ga0495623_0019898_1957_2955 309
59 3300048912 Ga0496109_0501416 Ga0496109_0501416_81_1133 309
60 3300050510 nmdc:mga06r32_22136_c2 nmdc:mga06r32_22136_c2_1391_2329 309
61 3300009093 Ga0105240_10021282 Ga0105240_100212826 310
62 3300025913 Ga0207695_10159934 Ga0207695_101599342 310
63 3300005435 Ga0070714_100000008 Ga0070714_100000008195 311
64 3300025929 Ga0207664_10000002 Ga0207664_10000002280 311
65 3300031838 Ga0307518_10000218 Ga0307518_1000021816 312
66 3300049569 Ga0501032_0002315 Ga0501032_0002315_11765_12769 312
67 3300049571 Ga0501034_0051427 Ga0501034_0051427_1689_2693 312
68 3300049572 Ga0501036_0039382 Ga0501036_0039382_1638_2642 312
69 3300049574 Ga0501038_0017395 Ga0501038_0017395_1616_2620 312
70 3300049579 Ga0501043_0012379 Ga0501043_0012379_1287_2291 312
71 3300049581 Ga0501047_0025647 Ga0501047_0025647_2963_3967 312
72 3300049822 Ga0501035_0031047 Ga0501035_0031047_571_1575 312
73 3300049823 Ga0501044_0033896 Ga0501044_0033896_3164_4168 312
74 iso_pu_bacteria 2867507094 2867512589 312
75 3300006844 Ga0075428_100049265 Ga0075428_1000492653 316
76 3300006846 Ga0075430_100012159 Ga0075430_1000121592 316
77 3300006880 Ga0075429_100000772 Ga0075429_10000077215 316
78 3300050507 nmdc:mga05p37_142961_c1 nmdc:mga05p37_142961_c1_405_1355 316
79 3300050509 nmdc:mga0qj67_120751_c1 nmdc:mga0qj67_120751_c1_605_1555 316
80 iso_pu_bacteria 2515154129 2515719728 316
81 3300005364 Ga0070673_100339785 Ga0070673_1003397852 317
82 3300031507 Ga0307509_10253171 Ga0307509_102531712 317
83 iso_pu_bacteria 2795385470 2795781857 317
84 iso_pu_bacteria 2515154088 2515496539 318
85 iso_pu_bacteria 2515154137 2515757587 318
86 iso_pu_bacteria 2515154203 2516091656 318
87 iso_pu_bacteria 2643221578 2643901396 319
88 iso_pu_bacteria 2643221673 2644407540 319
89 iso_pu_bacteria 2946045630 2946046144 319
90 3300028794 Ga0307515_10000032 Ga0307515_10000032240 320
91 3300035091 Ga0373951_0000286 Ga0373951_0000286_15163_16125 320
92 iso_pu_bacteria 2643221548 2643765902 320
93 iso_pu_bacteria 2791354901 2791916240 320
94 iso_pu_bacteria 2866612099 2866613120 320
95 iso_pu_bacteria 8003314358 8003320102 320
96 iso_pu_bacteria 8056207758 8056208064 320
97 3300061734 Ga0530510_0015464 Ga0530510_0015464_3613_4578 321
98 3300031730 Ga0307516_10035152 Ga0307516_100351522 322
99 3300046499 Ga0495594_0053702 Ga0495594_0053702_997_1992 322
100 3300005435 Ga0070714_100441447 Ga0070714_1004414471 323
101 3300005441 Ga0070700_100000004 Ga0070700_1000000048 323
102 3300009147 Ga0114129_10000594 Ga0114129_1000059413 323
103 3300013307 Ga0157372_10000652 Ga0157372_1000065228 323
104 3300021388 Ga0213875_10045674 Ga0213875_100456742 323
105 3300025924 Ga0207694_10059480 Ga0207694_100594802 323
106 3300025929 Ga0207664_10191516 Ga0207664_101915163 323
107 3300026075 Ga0207708_10000008 Ga0207708_10000008220 323
108 3300026075 Ga0207708_10000019 Ga0207708_1000001989 323
109 3300028794 Ga0307515_10015336 Ga0307515_1001533611 323
110 3300030522 Ga0307512_10040162 Ga0307512_100401622 323
111 3300031889 Ga0326468_10003187 Ga0326468_100031872 323
112 3300046507 Ga0495606_0002986 Ga0495606_0002986_10998_11969 323
113 3300050507 nmdc:mga05p37_17854_c1 nmdc:mga05p37_17854_c1_2534_3505 323
114 iso_pu_bacteria 2515154202 2516084965 323
115 3300003320 rootH2_10104221 rootH2_1010422111 324
116 3300003323 rootH1_10073969 rootH1_100739691 324
117 3300005441 Ga0070700_100056638 Ga0070700_1000566382 324
118 3300005455 Ga0070663_100000200 Ga0070663_1000002006 324
119 3300005539 Ga0068853_100014840 Ga0068853_1000148402 324
120 3300025924 Ga0207694_10068856 Ga0207694_100688562 324
121 3300025949 Ga0207667_10595120 Ga0207667_105951202 324
122 3300026041 Ga0207639_10207334 Ga0207639_102073342 324
123 3300026067 Ga0207678_10000087 Ga0207678_1000008741 324
124 3300026075 Ga0207708_10160466 Ga0207708_101604661 324
125 3300028794 Ga0307515_10032893 Ga0307515_100328936 324
126 3300031507 Ga0307509_10170078 Ga0307509_101700782 324
127 3300031730 Ga0307516_10007175 Ga0307516_100071757 324
128 3300033179 Ga0307507_10021217 Ga0307507_100212172 324
129 3300044658 Ga0466972_0001195 Ga0466972_0001195_6347_7330 324
130 3300044683 Ga0466965_0037409 Ga0466965_0037409_1067_2050 324
131 3300044693 Ga0466961_0001497 Ga0466961_0001497_11346_12329 324
132 3300044901 Ga0466960_0004370 Ga0466960_0004370_4152_5135 324
133 3300046462 Ga0495651_0032813 Ga0495651_0032813_2513_3496 324
134 3300050510 nmdc:mga06r32_180_c2 nmdc:mga06r32_180_c2_14603_15589 324
135 3300053078 Ga0495612_0037311 Ga0495612_0037311_310_1293 324
136 3300053140 Ga0500573_0015263 Ga0500573_0015263_23_1012 324

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08012

DUF1702

Protein of unknown function (DUF1702)

43

358

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q7j-assembly2.cif.gz_B engineered thermoplasma acidophilum f3 factor mimics human aminopeptidase n (apn) as a target for anticancer drug development 0.3126 31 324
7vpp-assembly1.cif.gz_A structures of a deltacoronavirus spike protein bound to porcine and human receptors indicate the risk of virus adaptation to humans 0.3083 43 323
8e0m-assembly4.cif.gz_K homotrimeric variant of tctrp9, bgl15 0.3082 149 320
5vhm-assembly1.cif.gz_f conformational landscape of the p28-bound human proteasome regulatory particle 0.3034 7 319
7aor-assembly1.cif.gz_aj mt-ssu from trypanosoma cruzi in complex with mt-if-3. 0.2984 56 247
ID Description Score Start End Superfamily
af_Q9SII7_10_167_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.4117 98 281 1.25.40.10
af_Q9SII7_10_167_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.3937 98 281 1.25.40.10
af_K7TTE2_354_520_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.3642 110 289 1.25.40.10
af_K7TTE2_354_520_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.3497 110 289 1.25.40.10
af_A0A2R8QP62_126_321_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.3369 141 323 1.25.10.10
ID Description Score Start End GO Terms
AF-M2ZFS2-F1-model_v4 Enediyne biosynthesis protein 0.9825 39 322
AF-A0A1Q4YSR7-F1-model_v4 Enediyne biosynthesis protein 0.982 6 323
AF-A0A7T8ZDX4-F1-model_v4 deleted 0.9803 2 317
AF-A0A1Q5HN04-F1-model_v4 Enediyne biosynthesis protein 0.9788 1 324
AF-R1IB50-F1-model_v4 Enediyne biosynthesis protein 0.9786 5 262

Feature Viewer

pLDDT pTM Quality
93.82 0.92 High
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Predicted Structure (AlphaFold2)

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