F167789

General Info

Members Datasets Scaffolds Average Seq Length
136 105 272 486

Family's Representative Sequence

Representative Sequence 3300048911|Ga0496108_0024194|Ga0496108_0024194_3041_4762
Length 548
Sequence VVDVGCADRAAQVSARPGVVYLVGAGPGDPGLMTARSLELIAAADTIFYDRLIPPGALDGARADTELVYVGKHPADADVPVIDHHSGRSITGTSDSQGGINALLIEAARAGKSVVRLKGGDPFVFGRGGEEGEALREAGVEFEVVPGVTAGVAAAAYAGIPVTHRDDASAVAFVTGHEDPAKAEIALDWGALARFPGTLVLYMGVKRLADNAAALVAAGRNPDEPAAAIERGTMDGQRTVVATLDSLADAVEREGIGAPALIVIGSVVDRRKALAWLERRPLHNKRVVVTRARAQASGLASVLRGLGAEVVELPAIRIEPRIGSEEVQRAVERIGEYALICVTSPNGAHLLFEALEETGLDARALGRVEKKQVRRGEASEAPLPSQTTIAAIGPGTARALAEHGVTADIVPKRFVAEALVEALDTVEVEGRRVLFARAAEARDVLPEGLRERGAEVDVVALYETIREAPAPEAIEAAQSADYVTFTSSSTVRNLTEALGDRFPTGARIVSIGPITSEAARAAGLEVAVEAERPDIDGLARALLEDTAR

Samples

Sample ID Description Type Environment
1 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
68 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
69 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
70 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
71 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
72 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
73 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
74 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
75 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
76 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
77 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
78 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
79 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
80 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
81 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
82 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
83 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
84 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
85 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
86 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
87 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
88 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
89 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
90 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
91 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
92 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
95 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
96 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
99 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
100 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
101 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
102 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
103 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
104 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
105 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 11.03
Rhizosphere 88.24
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496108_0024194 3300048911 Bacteria 5000
2 Ga0070683_100005063 3300005329 Bacteria 10945
3 Ga0070683_100006630 3300005329 Bacteria 9721
4 Ga0070683_100059354 3300005329 Bacteria 3554
5 Ga0070682_100000029 3300005337 Bacteria 183516
6 Ga0070682_100000216 3300005337 Bacteria 42444
7 Ga0068868_100001567 3300005338 Bacteria 15608
8 Ga0070675_100000153 3300005354 Bacteria 41558
9 Ga0070674_100000014 3300005356 Bacteria 100122
10 Ga0070674_100000033 3300005356 Bacteria 63982
11 Ga0070659_100024848 3300005366 Bacteria 4596
12 Ga0070713_100000076 3300005436 Bacteria 61668
13 Ga0068867_100000247 3300005459 Bacteria 35692
14 Ga0070685_10000203 3300005466 Bacteria 39835
15 Ga0070685_10055826 3300005466 Bacteria 2295
16 Ga0070684_100005122 3300005535 Bacteria 10017
17 Ga0070684_100101576 3300005535 Bacteria 2570
18 Ga0070672_100000262 3300005543 Bacteria 29769
19 Ga0070693_100001031 3300005547 Bacteria 12430
20 Ga0070665_100029304 3300005548 Bacteria 5540
21 Ga0070664_100046868 3300005564 Bacteria 3652
22 Ga0068854_100000115 3300005578 Bacteria 55089
23 Ga0068856_100000057 3300005614 Bacteria 102045
24 Ga0068852_100000058 3300005616 Bacteria 75312
25 Ga0068864_100000262 3300005618 Bacteria 47006
26 Ga0068866_10000002 3300005718 Bacteria 394090
27 Ga0068866_10001413 3300005718 Bacteria 10308
28 Ga0068861_100065405 3300005719 Bacteria 2801
29 Ga0068860_100010427 3300005843 Bacteria 9190
30 Ga0081540_1034532 3300005983 Bacteria 2725
31 Ga0081539_10000872 3300005985 Bacteria 57857
32 Ga0070715_10000015 3300006163 Bacteria 152816
33 Ga0075431_100056775 3300006847 Bacteria 4038
34 Ga0075433_10000663 3300006852 Bacteria 23254
35 Ga0068865_100000020 3300006881 Bacteria 104487
36 Ga0105245_10000159 3300009098 Bacteria 63630
37 Ga0105245_10002749 3300009098 Bacteria 15821
38 Ga0105242_10007841 3300009176 Bacteria 8216
39 Ga0105242_10056425 3300009176 Bacteria 3214
40 Ga0105248_10000022 3300009177 Bacteria 275935
41 Ga0105238_10000299 3300009551 Bacteria 54293
42 Ga0157370_10017872 3300013104 Bacteria 7144
43 Ga0157369_10000118 3300013105 Bacteria 111618
44 Ga0157378_10037915 3300013297 Bacteria 4271
45 Ga0157372_10000616 3300013307 Bacteria 38850
46 Ga0157376_10025615 3300014969 Bacteria 4648
47 Ga0163161_10000364 3300017792 Bacteria 37857
48 Ga0207642_10000001 3300025899 Bacteria 714030
49 Ga0207642_10000003 3300025899 Bacteria 650651
50 Ga0207642_10000094 3300025899 Bacteria 23395
51 Ga0207685_10000001 3300025905 Bacteria 604473
52 Ga0207663_10006850 3300025916 Bacteria 5867
53 Ga0207694_10000035 3300025924 Bacteria 195870
54 Ga0207659_10000043 3300025926 Bacteria 90795
55 Ga0207687_10000011 3300025927 Bacteria 388349
56 Ga0207700_10000009 3300025928 Bacteria 314953
57 Ga0207690_10010080 3300025932 Bacteria 5614
58 Ga0207686_10000549 3300025934 Bacteria 24232
59 Ga0207669_10000007 3300025937 Bacteria 169904
60 Ga0207669_10000137 3300025937 Bacteria 35016
61 Ga0207704_10000004 3300025938 Bacteria 239295
62 Ga0207691_10000374 3300025940 Bacteria 45009
63 Ga0207711_10000019 3300025941 Bacteria 412779
64 Ga0207661_10044757 3300025944 Bacteria 3500
65 Ga0207661_10067781 3300025944 Bacteria 2903
66 Ga0207679_10124438 3300025945 Bacteria 2059
67 Ga0207651_10000641 3300025960 Bacteria 14829
68 Ga0207640_10000059 3300025981 Bacteria 90901
69 Ga0207677_10009266 3300026023 Bacteria 5532
70 Ga0207702_10000027 3300026078 Bacteria 183792
71 Ga0207648_10000230 3300026089 Bacteria 59713
72 Ga0207676_10000038 3300026095 Bacteria 171492
73 Ga0207698_10000002 3300026142 Bacteria 404991
74 Ga0268266_10000809 3300028379 Bacteria 41366
75 Ga0268264_10025196 3300028381 Bacteria 4860
76 Ga0265319_1000029 3300028563 Bacteria 131291
77 Ga0265338_10000179 3300028800 Bacteria 117995
78 Ga0436364_0149451 3300037853 Bacteria 2209
79 Ga0395901_0040775 3300038443 Bacteria 4809
80 Ga0466957_0000145 3300044842 Bacteria 30469
81 Ga0466960_0023214 3300044901 Bacteria 2783
82 Ga0466967_0000008 3300045976 Bacteria 127135
83 Ga0495603_0000117 3300046455 Bacteria 38871
84 Ga0495603_0004297 3300046455 Bacteria 8494
85 Ga0495603_0010640 3300046455 Bacteria 5577
86 Ga0495641_0013706 3300046461 Bacteria 4433
87 Ga0495651_0069801 3300046462 Bacteria 2675
88 Ga0495651_0096841 3300046462 Bacteria 2204
89 Ga0495653_0100413 3300046463 Bacteria 2098
90 Ga0495582_0000022 3300046473 Bacteria 83315
91 Ga0495608_0000163 3300046511 Bacteria 47170
92 Ga0495628_0001583 3300046516 Bacteria 20854
93 Ga0495630_0000435 3300046517 Bacteria 31943
94 Ga0495630_0017634 3300046517 Bacteria 5233
95 Ga0495634_0000013 3300046642 Bacteria 130546
96 Ga0495634_0001471 3300046642 Bacteria 20875
97 Ga0495625_0001659 3300046660 Bacteria 26100
98 Ga0495588_0000240 3300046674 Bacteria 46975
99 Ga0495658_0000008 3300046683 Bacteria 115426
100 Ga0495613_0000298 3300046689 Bacteria 44864
101 Ga0495604_0000033 3300047317 Bacteria 134810
102 Ga0495604_0000850 3300047317 Bacteria 25489
103 Ga0495604_0043943 3300047317 Bacteria 3494
104 Ga0495676_0070100 3300047321 Bacteria 2702
105 Ga0495680_0002477 3300047322 Bacteria 18877
106 Ga0495593_0059467 3300047673 Bacteria 2002
107 Ga0495602_0000010 3300048088 Bacteria 212121
108 Ga0496100_0000003 3300048903 Bacteria 360802
109 Ga0496100_0000063 3300048903 Bacteria 60957
110 Ga0496101_0000003 3300048904 Bacteria 406565
111 Ga0496101_0000016 3300048904 Bacteria 240753
112 Ga0496104_0012405 3300048907 Bacteria 7663
113 Ga0496106_0000015 3300048909 Bacteria 187570
114 Ga0496106_0000160 3300048909 Bacteria 48936
115 Ga0496106_0007972 3300048909 Bacteria 7824
116 Ga0496107_0000008 3300048910 Bacteria 251874
117 Ga0496107_0000014 3300048910 Bacteria 176738
118 Ga0496110_0031692 3300048913 Bacteria 4562
119 Ga0496111_0000022 3300048914 Bacteria 66777
120 Ga0496112_0004601 3300048915 Bacteria 11737
121 Ga0496113_0000093 3300048916 Bacteria 38914
122 Ga0501047_0025178 3300049581 Bacteria 5717
123 Ga0501069_0056020 3300049585 Bacteria 2196
124 Ga0501072_0011591 3300049588 Bacteria 6737
125 nmdc:mga0n895_144256_c1 3300050512 Bacteria 2410
126 nmdc:mga0a205_155_c1 3300050515 Bacteria 44726
127 Ga0495601_0000012 3300053077 Bacteria 227853
128 Ga0495601_0000169 3300053077 Bacteria 35095
129 Ga0495601_0004850 3300053077 Bacteria 7804
130 Ga0495601_0017107 3300053077 Bacteria 4400
131 Ga0495601_0079951 3300053077 Bacteria 2097
132 Ga0495612_0044748 3300053078 Bacteria 1811
133 Ga0495595_0000372 3300053084 Bacteria 17048
134 Ga0495619_0000018 3300053085 Bacteria 209943
135 Ga0495619_0000758 3300053085 Bacteria 21054
136 Ga0495619_0009390 3300053085 Bacteria 6171
137 Ga0496108_0024194
138 Ga0070683_100005063
139 Ga0070683_100006630
140 Ga0070683_100059354
141 Ga0070682_100000029
142 Ga0070682_100000216
143 Ga0068868_100001567
144 Ga0070675_100000153
145 Ga0070674_100000014
146 Ga0070674_100000033
147 Ga0070659_100024848
148 Ga0070713_100000076
149 Ga0068867_100000247
150 Ga0070685_10000203
151 Ga0070685_10055826
152 Ga0070684_100005122
153 Ga0070684_100101576
154 Ga0070672_100000262
155 Ga0070693_100001031
156 Ga0070665_100029304
157 Ga0070664_100046868
158 Ga0068854_100000115
159 Ga0068856_100000057
160 Ga0068852_100000058
161 Ga0068864_100000262
162 Ga0068866_10000002
163 Ga0068866_10001413
164 Ga0068861_100065405
165 Ga0068860_100010427
166 Ga0081540_1034532
167 Ga0081539_10000872
168 Ga0070715_10000015
169 Ga0075431_100056775
170 Ga0075433_10000663
171 Ga0068865_100000020
172 Ga0105245_10000159
173 Ga0105245_10002749
174 Ga0105242_10007841
175 Ga0105242_10056425
176 Ga0105248_10000022
177 Ga0105238_10000299
178 Ga0157370_10017872
179 Ga0157369_10000118
180 Ga0157378_10037915
181 Ga0157372_10000616
182 Ga0157376_10025615
183 Ga0163161_10000364
184 Ga0207642_10000001
185 Ga0207642_10000003
186 Ga0207642_10000094
187 Ga0207685_10000001
188 Ga0207663_10006850
189 Ga0207694_10000035
190 Ga0207659_10000043
191 Ga0207687_10000011
192 Ga0207700_10000009
193 Ga0207690_10010080
194 Ga0207686_10000549
195 Ga0207669_10000007
196 Ga0207669_10000137
197 Ga0207704_10000004
198 Ga0207691_10000374
199 Ga0207711_10000019
200 Ga0207661_10044757
201 Ga0207661_10067781
202 Ga0207679_10124438
203 Ga0207651_10000641
204 Ga0207640_10000059
205 Ga0207677_10009266
206 Ga0207702_10000027
207 Ga0207648_10000230
208 Ga0207676_10000038
209 Ga0207698_10000002
210 Ga0268266_10000809
211 Ga0268264_10025196
212 Ga0265319_1000029
213 Ga0265338_10000179
214 Ga0436364_0149451
215 Ga0395901_0040775
216 Ga0466957_0000145
217 Ga0466960_0023214
218 Ga0466967_0000008
219 Ga0495603_0000117
220 Ga0495603_0004297
221 Ga0495603_0010640
222 Ga0495641_0013706
223 Ga0495651_0069801
224 Ga0495651_0096841
225 Ga0495653_0100413
226 Ga0495582_0000022
227 Ga0495608_0000163
228 Ga0495628_0001583
229 Ga0495630_0000435
230 Ga0495630_0017634
231 Ga0495634_0000013
232 Ga0495634_0001471
233 Ga0495625_0001659
234 Ga0495588_0000240
235 Ga0495658_0000008
236 Ga0495613_0000298
237 Ga0495604_0000033
238 Ga0495604_0000850
239 Ga0495604_0043943
240 Ga0495676_0070100
241 Ga0495680_0002477
242 Ga0495593_0059467
243 Ga0495602_0000010
244 Ga0496100_0000003
245 Ga0496100_0000063
246 Ga0496101_0000003
247 Ga0496101_0000016
248 Ga0496104_0012405
249 Ga0496106_0000015
250 Ga0496106_0000160
251 Ga0496106_0007972
252 Ga0496107_0000008
253 Ga0496107_0000014
254 Ga0496110_0031692
255 Ga0496111_0000022
256 Ga0496112_0004601
257 Ga0496113_0000093
258 Ga0501047_0025178
259 Ga0501069_0056020
260 Ga0501072_0011591
261 nmdc:mga0n895_144256_c1
262 nmdc:mga0a205_155_c1
263 Ga0495601_0000012
264 Ga0495601_0000169
265 Ga0495601_0004850
266 Ga0495601_0017107
267 Ga0495601_0079951
268 Ga0495612_0044748
269 Ga0495595_0000372
270 Ga0495619_0000018
271 Ga0495619_0000758
272 Ga0495619_0009390

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02602

HEM4

Uroporphyrinogen-III synthase HemD

297

540

0.92

PF00590

TP_methylase

Tetrapyrrole (Corrin/Porphyrin) Methylases

19

248

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1s4d-assembly4.cif.gz_H crystal structure analysis of the s-adenosyl-l-methionine dependent uroporphyrinogen-iii c-methyltransferase sumt 0.8992 1 250
1s4d-assembly5.cif.gz_J crystal structure analysis of the s-adenosyl-l-methionine dependent uroporphyrinogen-iii c-methyltransferase sumt 0.8965 1 255
1s4d-assembly3.cif.gz_F crystal structure analysis of the s-adenosyl-l-methionine dependent uroporphyrinogen-iii c-methyltransferase sumt 0.8957 1 250
1s4d-assembly4.cif.gz_I crystal structure analysis of the s-adenosyl-l-methionine dependent uroporphyrinogen-iii c-methyltransferase sumt 0.8951 1 250
1s4d-assembly6.cif.gz_L crystal structure analysis of the s-adenosyl-l-methionine dependent uroporphyrinogen-iii c-methyltransferase sumt 0.8946 1 255
ID Description Score Start End Superfamily
1s4dH02 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.896 128 250 3.30.950.10
1s4dE01 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.885 1 126 3.40.1010.10
af_Q2FXR2_34_131_3.40.50.10090 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8809 315 416 3.40.50.10090
af_Q24JK4_55_146_3.40.50.10190 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;BRCT domain 0.8804 259 290 3.40.50.10190
af_I6X5I7_276_403_3.30.950.10 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.876 130 249 3.30.950.10
ID Description Score Start End GO Terms
AF-A0A7J4N8S3-F1-model_v4 Uroporphyrin-III C-methyltransferase (EC 2.1.1.107) 0.9661 165 253 GO:0004851
GO:0019354
GO:0032259
AF-B1HRE5-F1-model_v4 Uroporphyrinogen-III C-methyltransferase (EC 2.1.1.107) 0.9625 166 255 GO:0004851
GO:0016020
GO:0019354
GO:0032259
AF-A0A117LUV6-F1-model_v4 Uroporphyrinogen-III C-methyltransferase 0.9456 148 254 GO:0004851
GO:0019354
GO:0032259
AF-A0A1Q7E4D4-F1-model_v4 Uroporphyrinogen-III synthase (EC 4.2.1.75) 0.942 259 509 GO:0004852
GO:0006780
GO:0006782
AF-A0A7W0RBW4-F1-model_v4 Uroporphyrinogen-III synthase 0.9308 259 509 GO:0004852
GO:0006780

Map