F169834

General Info

Members Datasets Scaffolds Average Seq Length
137 84 137 523

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_10157338|Ga0157372_101573383
Length 534
Sequence LRTIIEIFSGLSHVRAMSETENPGGEAALRSADSRKPTEPCSIVIFGASGDLTARKLIPALYQLFKEQQMPSSFRVIGFARREKTDDSWRQELRAALDQFSRTKPVDEKVWTAFAKNIFYCQGDLTDSAAYQKLEGMLGGFGQAPLRENLLFYLATQPSQFGEVVEQLHKAALLHKNGEAGWQRIVVEKPFGHDLESAKSLNQELTRFAREQQVFRIDHYLGKETVQNILMFRFSNSIFERLWNRDSIDHVQITVSERIGVGGRGGYYEEAGALRDMVQNHMLQVLALVSMEPPVSLEAEAIRDEKVKLLKSIRSLTPADVAKQVVRGQYFAGVVDGEARPGYRQEEKVKSDSNVETYVALKLFIDNWRWSGVPFYLRTGKNLPTSASEVRIQFRPTPHVLFAAACGELDQNAIALRLQPNEGIYLRFNGKVPGTTLGVRPVRMNFSYDSEFGAYTPEAYERLLLEAMIGDATLFIRRDEVETAWQIVDSVRKGWEGKKLSNREFYAAGTWGPMAADDLLAPSGHVWHEPQVGK

Samples

Sample ID Description Type Environment
1 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
4 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
5 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
6 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
7 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
8 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
14 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
15 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
16 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
18 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
19 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
20 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
21 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
22 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
23 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
24 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
33 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
34 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
35 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
36 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
37 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
38 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
39 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
40 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
41 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
42 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
43 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
44 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
45 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
46 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
47 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
48 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
49 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
50 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
51 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
52 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
53 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
54 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
55 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
56 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
57 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
58 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
59 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
60 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
61 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
62 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
63 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
64 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
65 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
66 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
67 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
68 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
69 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
70 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
71 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
72 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
73 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
74 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
75 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
76 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
77 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
78 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
84 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.73
Rhizosphere 99.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10095400 3300005295 Bacteria 3383
2 Ga0065707_10112224 3300005295 Bacteria 2368
3 Ga0070689_100027689 3300005340 Bacteria 4274
4 Ga0070711_100008228 3300005439 Bacteria 6381
5 Ga0070708_100032425 3300005445 Bacteria 4532
6 Ga0070681_10043814 3300005458 Bacteria 4479
7 Ga0070679_100113141 3300005530 Bacteria 2700
8 Ga0070686_100004105 3300005544 Bacteria 8015
9 Ga0068855_100130786 3300005563 Bacteria 2867
10 Ga0068856_100000079 3300005614 Bacteria 92486
11 Ga0068856_100005449 3300005614 Bacteria 12536
12 Ga0068856_100008364 3300005614 Bacteria 10082
13 Ga0068859_100017328 3300005617 Bacteria 7235
14 Ga0068859_100049824 3300005617 Bacteria 4206
15 Ga0068859_100186334 3300005617 Bacteria 2159
16 Ga0068863_100009640 3300005841 Bacteria 9421
17 Ga0075428_100003008 3300006844 Bacteria 18404
18 Ga0075431_100157050 3300006847 Bacteria 2340
19 Ga0097620_100017328 3300006931 Bacteria 7235
20 Ga0097620_100049823 3300006931 Bacteria 4206
21 Ga0097620_100186330 3300006931 Bacteria 2159
22 Ga0105240_10007924 3300009093 Bacteria 15322
23 Ga0105240_10033283 3300009093 Bacteria 6662
24 Ga0105240_10210739 3300009093 Bacteria 2271
25 Ga0111539_10021264 3300009094 Bacteria 7988
26 Ga0111539_10126251 3300009094 Bacteria 2997
27 Ga0105238_10024668 3300009551 Bacteria 6130
28 Ga0157371_10108128 3300013102 Bacteria 1973
29 Ga0157370_10073248 3300013104 Bacteria 3231
30 Ga0157378_10067740 3300013297 Bacteria 3200
31 Ga0157372_10157338 3300013307 Bacteria 2625
32 Ga0157375_10000006 3300013308 Bacteria 384086
33 Ga0163163_10000010 3300014325 Bacteria 264773
34 Ga0163163_10016944 3300014325 Bacteria 6783
35 Ga0207695_10005862 3300025913 Bacteria 16128
36 Ga0207695_10167227 3300025913 Bacteria 2126
37 Ga0207663_10000627 3300025916 Bacteria 15650
38 Ga0207694_10025257 3300025924 Bacteria 4514
39 Ga0207694_10051062 3300025924 Bacteria 3205
40 Ga0207670_10006967 3300025936 Bacteria 6292
41 Ga0207670_10019978 3300025936 Bacteria 4105
42 Ga0207667_10155885 3300025949 Bacteria 2350
43 Ga0207702_10048013 3300026078 Bacteria 3599
44 Ga0207641_10010974 3300026088 Bacteria 7426
45 Ga0207674_10027960 3300026116 Bacteria 5959
46 Ga0265337_1000067 3300028556 Bacteria 48544
47 Ga0265337_1006523 3300028556 Bacteria 4489
48 Ga0265319_1000001 3300028563 Bacteria 549513
49 Ga0265323_10000052 3300028653 Bacteria 63341
50 Ga0265336_10002168 3300028666 Bacteria 8297
51 Ga0265338_10000242 3300028800 Bacteria 101378
52 Ga0265338_10001889 3300028800 Bacteria 32790
53 Ga0265338_10003083 3300028800 Bacteria 23913
54 Ga0265338_10004415 3300028800 Bacteria 19017
55 Ga0265338_10004449 3300028800 Bacteria 18924
56 Ga0265338_10007464 3300028800 Bacteria 13558
57 Ga0265338_10010754 3300028800 Bacteria 10678
58 Ga0265338_10011227 3300028800 Bacteria 10379
59 Ga0265338_10018458 3300028800 Bacteria 7465
60 Ga0265338_10022865 3300028800 Bacteria 6451
61 Ga0265338_10026672 3300028800 Bacteria 5818
62 Ga0265338_10032580 3300028800 Bacteria 5077
63 Ga0265324_10018493 3300029957 Bacteria 2518
64 Ga0265320_10029295 3300031240 Bacteria 2849
65 Ga0265320_10039217 3300031240 Bacteria 2370
66 Ga0265325_10044235 3300031241 Bacteria 2320
67 Ga0265329_10003294 3300031242 Bacteria 7069
68 Ga0265340_10000427 3300031247 Bacteria 22587
69 Ga0265327_10001286 3300031251 Bacteria 32988
70 Ga0265316_10039103 3300031344 Bacteria 3813
71 Ga0265316_10043083 3300031344 Bacteria 3602
72 Ga0265316_10104559 3300031344 Bacteria 2149
73 Ga0265313_10003946 3300031595 Bacteria 11671
74 Ga0265313_10006680 3300031595 Bacteria 8085
75 Ga0265314_10000042 3300031711 Bacteria 215775
76 Ga0265314_10037114 3300031711 Bacteria 3534
77 Ga0265314_10049613 3300031711 Bacteria 2937
78 Ga0373928_0007616 3300035084 Bacteria 2091
79 Ga0373932_0000001 3300035112 Bacteria 1459067
80 Ga0373954_0043428 3300035118 Bacteria 2096
81 Ga0373962_0000105 3300035242 Bacteria 18388
82 Ga0373931_0000004 3300035691 Bacteria 535140
83 Ga0373935_0001001 3300035692 Bacteria 15376
84 Ga0373927_0004597 3300035695 Bacteria 9622
85 Ga0373947_0016774 3300035725 Bacteria 4208
86 Ga0373937_0009647 3300036401 Bacteria 8405
87 Ga0373937_0109620 3300036401 Bacteria 2567
88 Ga0373925_0000572 3300037068 Bacteria 35958
89 Ga0373925_0003282 3300037068 Bacteria 12581
90 Ga0395901_0033308 3300038443 Bacteria 5319
91 Ga0451577_0001593 3300042876 Bacteria 29571
92 Ga0451577_0016352 3300042876 Bacteria 6873
93 Ga0451577_0023301 3300042876 Bacteria 5647
94 Ga0453684_0000192 3300044712 Bacteria 266757
95 Ga0453684_0013422 3300044712 Bacteria 13304
96 Ga0451576_0032760 3300045051 Bacteria 5527
97 Ga0451576_0042820 3300045051 Bacteria 4781
98 Ga0451576_0106273 3300045051 Bacteria 2921
99 Ga0451576_0121412 3300045051 Bacteria 2721
100 Ga0451576_0128119 3300045051 Bacteria 2645
101 Ga0495592_0000101 3300046454 Bacteria 75856
102 Ga0495592_0016978 3300046454 Bacteria 5526
103 Ga0495618_0006198 3300046514 Bacteria 7254
104 Ga0495618_0024932 3300046514 Bacteria 3709
105 Ga0495628_0001128 3300046516 Bacteria 24354
106 Ga0495628_0069586 3300046516 Bacteria 2745
107 Ga0495630_0000171 3300046517 Bacteria 50810
108 Ga0495630_0074765 3300046517 Bacteria 2552
109 Ga0495666_0002310 3300046526 Bacteria 9510
110 Ga0495652_0025538 3300046529 Bacteria 5225
111 Ga0495652_0048668 3300046529 Bacteria 3631
112 Ga0495640_0016344 3300046533 Bacteria 5553
113 Ga0495586_0000157 3300046535 Bacteria 43987
114 Ga0495586_0003123 3300046535 Bacteria 8909
115 Ga0495586_0004739 3300046535 Bacteria 7272
116 Ga0495622_0018710 3300046557 Bacteria 3226
117 Ga0495667_0089763 3300046559 Bacteria 1992
118 Ga0495634_0002798 3300046642 Bacteria 14333
119 Ga0495634_0024530 3300046642 Bacteria 4230
120 Ga0495613_0153884 3300046689 Bacteria 1639
121 Ga0495624_0002229 3300046690 Bacteria 14761
122 Ga0495581_0029947 3300047315 Bacteria 3156
123 Ga0495674_0000893 3300047319 Bacteria 28550
124 Ga0495674_0021428 3300047319 Bacteria 5979
125 Ga0495674_0126882 3300047319 Bacteria 2152
126 Ga0495676_0027315 3300047321 Bacteria 4895
127 Ga0495680_0078132 3300047322 Bacteria 2505
128 Ga0496115_0008292 3300048918 Bacteria 7681
129 Ga0501031_0000103 3300049568 Bacteria 45138
130 Ga0501032_0058774 3300049569 Bacteria 2581
131 Ga0501033_0026272 3300049570 Bacteria 4383
132 Ga0501047_0176155 3300049581 Bacteria 2006
133 Ga0501035_0013360 3300049822 Bacteria 7580
134 Ga0501035_0111412 3300049822 Bacteria 2398
135 Ga0501044_0000158 3300049823 Bacteria 83865
136 nmdc:mga08y16_34319_c1 3300050511 Bacteria 5330
137 nmdc:mga08y16_45330_c1 3300050511 Bacteria 4607

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049568 Ga0501031_0000103 Ga0501031_0000103_3959_5512 492
2 3300049569 Ga0501032_0058774 Ga0501032_0058774_953_2506 492
3 3300049570 Ga0501033_0026272 Ga0501033_0026272_2485_4038 492
4 3300049822 Ga0501035_0013360 Ga0501035_0013360_571_2124 492
5 3300049823 Ga0501044_0000158 Ga0501044_0000158_36995_38548 492
6 3300028556 Ga0265337_1006523 Ga0265337_10065232 504
7 3300028653 Ga0265323_10000052 Ga0265323_1000005225 504
8 3300028666 Ga0265336_10002168 Ga0265336_100021688 504
9 3300028800 Ga0265338_10007464 Ga0265338_100074642 504
10 3300028800 Ga0265338_10018458 Ga0265338_100184582 504
11 3300031240 Ga0265320_10039217 Ga0265320_100392172 504
12 3300031344 Ga0265316_10039103 Ga0265316_100391033 504
13 3300005617 Ga0068859_100186334 Ga0068859_1001863342 508
14 3300006931 Ga0097620_100186330 Ga0097620_1001863302 508
15 3300005614 Ga0068856_100005449 Ga0068856_1000054499 512
16 3300026078 Ga0207702_10048013 Ga0207702_100480132 512
17 3300005563 Ga0068855_100130786 Ga0068855_1001307862 513
18 3300005614 Ga0068856_100000079 Ga0068856_10000007929 513
19 3300009551 Ga0105238_10024668 Ga0105238_100246686 513
20 3300025924 Ga0207694_10025257 Ga0207694_100252572 513
21 3300025924 Ga0207694_10051062 Ga0207694_100510622 513
22 3300025949 Ga0207667_10155885 Ga0207667_101558853 513
23 3300028800 Ga0265338_10032580 Ga0265338_100325803 513
24 3300029957 Ga0265324_10018493 Ga0265324_100184932 513
25 3300031251 Ga0265327_10001286 Ga0265327_1000128619 513
26 3300035084 Ga0373928_0007616 Ga0373928_0007616_10_1560 513
27 3300035112 Ga0373932_0000001 Ga0373932_0000001_282744_284294 513
28 3300035242 Ga0373962_0000105 Ga0373962_0000105_1210_2760 513
29 3300035691 Ga0373931_0000004 Ga0373931_0000004_282753_284303 513
30 3300037068 Ga0373925_0000572 Ga0373925_0000572_3328_4878 513
31 3300046557 Ga0495622_0018710 Ga0495622_0018710_1008_2558 513
32 3300009093 Ga0105240_10033283 Ga0105240_100332839 514
33 3300013308 Ga0157375_10000006 Ga0157375_1000000628 514
34 3300014325 Ga0163163_10016944 Ga0163163_100169443 514
35 3300026116 Ga0207674_10027960 Ga0207674_100279602 514
36 3300045051 Ga0451576_0128119 Ga0451576_0128119_340_1899 514
37 3300046454 Ga0495592_0000101 Ga0495592_0000101_31096_32646 514
38 3300046514 Ga0495618_0024932 Ga0495618_0024932_117_1667 514
39 3300046516 Ga0495628_0001128 Ga0495628_0001128_22595_24145 514
40 3300046517 Ga0495630_0000171 Ga0495630_0000171_13517_15088 514
41 3300046517 Ga0495630_0074765 Ga0495630_0074765_253_1803 514
42 3300046526 Ga0495666_0002310 Ga0495666_0002310_1302_2873 514
43 3300046529 Ga0495652_0025538 Ga0495652_0025538_2137_3687 514
44 3300046535 Ga0495586_0000157 Ga0495586_0000157_39922_41493 514
45 3300046535 Ga0495586_0003123 Ga0495586_0003123_7154_8704 514
46 3300046642 Ga0495634_0024530 Ga0495634_0024530_1860_3431 514
47 3300046690 Ga0495624_0002229 Ga0495624_0002229_13148_14698 514
48 3300047315 Ga0495581_0029947 Ga0495581_0029947_1069_2640 514
49 3300047319 Ga0495674_0000893 Ga0495674_0000893_13517_15088 514
50 3300047319 Ga0495674_0126882 Ga0495674_0126882_349_1899 514
51 3300047321 Ga0495676_0027315 Ga0495676_0027315_341_1912 514
52 3300049822 Ga0501035_0111412 Ga0501035_0111412_828_2381 514
53 3300005439 Ga0070711_100008228 Ga0070711_1000082285 515
54 3300005530 Ga0070679_100113141 Ga0070679_1001131412 515
55 3300005614 Ga0068856_100008364 Ga0068856_1000083649 515
56 3300013104 Ga0157370_10073248 Ga0157370_100732483 515
57 3300013307 Ga0157372_10157338 Ga0157372_101573383 515
58 3300025916 Ga0207663_10000627 Ga0207663_1000062713 515
59 3300028556 Ga0265337_1000067 Ga0265337_100006712 515
60 3300028563 Ga0265319_1000001 Ga0265319_1000001224 515
61 3300028800 Ga0265338_10000242 Ga0265338_1000024219 515
62 3300028800 Ga0265338_10001889 Ga0265338_1000188921 515
63 3300028800 Ga0265338_10003083 Ga0265338_1000308310 515
64 3300028800 Ga0265338_10004415 Ga0265338_1000441510 515
65 3300028800 Ga0265338_10004449 Ga0265338_1000444916 515
66 3300028800 Ga0265338_10010754 Ga0265338_100107545 515
67 3300028800 Ga0265338_10011227 Ga0265338_100112274 515
68 3300028800 Ga0265338_10022865 Ga0265338_100228655 515
69 3300028800 Ga0265338_10026672 Ga0265338_100266722 515
70 3300031240 Ga0265320_10029295 Ga0265320_100292952 515
71 3300031241 Ga0265325_10044235 Ga0265325_100442352 515
72 3300031247 Ga0265340_10000427 Ga0265340_100004276 515
73 3300031344 Ga0265316_10043083 Ga0265316_100430833 515
74 3300031344 Ga0265316_10104559 Ga0265316_101045592 515
75 3300031595 Ga0265313_10003946 Ga0265313_100039464 515
76 3300031595 Ga0265313_10006680 Ga0265313_100066806 515
77 3300031711 Ga0265314_10049613 Ga0265314_100496132 515
78 3300035118 Ga0373954_0043428 Ga0373954_0043428_159_1793 515
79 3300036401 Ga0373937_0109620 Ga0373937_0109620_538_2172 515
80 3300042876 Ga0451577_0016352 Ga0451577_0016352_4172_5731 515
81 3300044712 Ga0453684_0000192 Ga0453684_0000192_240769_242328 515
82 3300045051 Ga0451576_0032760 Ga0451576_0032760_1039_2598 515
83 3300046454 Ga0495592_0016978 Ga0495592_0016978_3753_5309 515
84 3300046514 Ga0495618_0006198 Ga0495618_0006198_4597_6231 515
85 3300046516 Ga0495628_0069586 Ga0495628_0069586_253_1809 515
86 3300046529 Ga0495652_0048668 Ga0495652_0048668_1668_3224 515
87 3300046559 Ga0495667_0089763 Ga0495667_0089763_189_1745 515
88 3300046642 Ga0495634_0002798 Ga0495634_0002798_12246_13880 515
89 3300047319 Ga0495674_0021428 Ga0495674_0021428_1216_2772 515
90 3300047322 Ga0495680_0078132 Ga0495680_0078132_652_2286 515
91 3300048918 Ga0496115_0008292 Ga0496115_0008292_1565_3121 515
92 3300005340 Ga0070689_100027689 Ga0070689_1000276892 516
93 3300005458 Ga0070681_10043814 Ga0070681_100438143 516
94 3300005617 Ga0068859_100017328 Ga0068859_1000173285 516
95 3300006931 Ga0097620_100017328 Ga0097620_1000173289 516
96 3300009093 Ga0105240_10210739 Ga0105240_102107392 516
97 3300013102 Ga0157371_10108128 Ga0157371_101081281 516
98 3300013297 Ga0157378_10067740 Ga0157378_100677402 516
99 3300014325 Ga0163163_10000010 Ga0163163_1000001098 516
100 3300025913 Ga0207695_10167227 Ga0207695_101672271 516
101 3300025936 Ga0207670_10006967 Ga0207670_100069674 516
102 3300025936 Ga0207670_10019978 Ga0207670_100199782 516
103 3300031711 Ga0265314_10037114 Ga0265314_100371142 516
104 3300042876 Ga0451577_0001593 Ga0451577_0001593_19725_21362 516
105 3300044712 Ga0453684_0013422 Ga0453684_0013422_11603_13240 516
106 3300045051 Ga0451576_0042820 Ga0451576_0042820_1055_2614 516
107 3300046533 Ga0495640_0016344 Ga0495640_0016344_3421_5202 516
108 3300046535 Ga0495586_0004739 Ga0495586_0004739_5220_7001 516
109 3300046689 Ga0495613_0153884 Ga0495613_0153884_12_1571 516
110 3300049581 Ga0501047_0176155 Ga0501047_0176155_263_1822 516
111 3300005295 Ga0065707_10095400 Ga0065707_100954002 517
112 3300005295 Ga0065707_10112224 Ga0065707_101122242 517
113 3300005445 Ga0070708_100032425 Ga0070708_1000324252 517
114 3300005544 Ga0070686_100004105 Ga0070686_1000041054 517
115 3300005617 Ga0068859_100049824 Ga0068859_1000498242 517
116 3300005841 Ga0068863_100009640 Ga0068863_1000096406 517
117 3300006844 Ga0075428_100003008 Ga0075428_1000030083 517
118 3300006847 Ga0075431_100157050 Ga0075431_1001570502 517
119 3300006931 Ga0097620_100049823 Ga0097620_1000498232 517
120 3300009093 Ga0105240_10007924 Ga0105240_100079242 517
121 3300009094 Ga0111539_10021264 Ga0111539_100212643 517
122 3300009094 Ga0111539_10126251 Ga0111539_101262511 517
123 3300025913 Ga0207695_10005862 Ga0207695_100058623 517
124 3300026088 Ga0207641_10010974 Ga0207641_100109744 517
125 3300031242 Ga0265329_10003294 Ga0265329_100032947 517
126 3300031711 Ga0265314_10000042 Ga0265314_10000042149 517
127 3300035692 Ga0373935_0001001 Ga0373935_0001001_11351_13060 517
128 3300035695 Ga0373927_0004597 Ga0373927_0004597_2856_4565 517
129 3300035725 Ga0373947_0016774 Ga0373947_0016774_1803_3512 517
130 3300036401 Ga0373937_0009647 Ga0373937_0009647_4878_6464 517
131 3300037068 Ga0373925_0003282 Ga0373925_0003282_1865_3574 517
132 3300038443 Ga0395901_0033308 Ga0395901_0033308_823_2391 517
133 3300042876 Ga0451577_0023301 Ga0451577_0023301_3709_5271 517
134 3300045051 Ga0451576_0106273 Ga0451576_0106273_1057_2634 517
135 3300045051 Ga0451576_0121412 Ga0451576_0121412_50_1675 517
136 3300050511 nmdc:mga08y16_34319_c1 nmdc:mga08y16_34319_c1_1661_3226 517
137 3300050511 nmdc:mga08y16_45330_c1 nmdc:mga08y16_45330_c1_2253_3806 517

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00479

G6PD_N

Glucose-6-phosphate dehydrogenase, NAD binding domain

44

228

0.97

PF02781

G6PD_C

Glucose-6-phosphate dehydrogenase, C-terminal domain

230

528

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7sei-assembly1.cif.gz_A-2 glucose-6-phosphate 1-dehydrogenase (k403q) 0.8848 20 505
6va8-assembly1.cif.gz_A-2 crystal structure of glucose-6-phosphate dehydrogenase f381l mutant in complex with catalytic nadp+ 0.8835 20 507
6va7-assembly1.cif.gz_A-2 crystal structure of glucose-6-phosphate dehydrogenase p396l mutant in complex with catalytic nadp+ 0.88 18 509
6vaq-assembly1.cif.gz_A-2 crystal structure of glucose-6-phosphate dehydrogenase v394l mutant in complex with catalytic nadp+ 0.8797 18 509
6va7-assembly1.cif.gz_A-2 crystal structure of glucose-6-phosphate dehydrogenase p396l mutant in complex with catalytic nadp+ 0.8781 18 509
ID Description Score Start End Superfamily
4lgvD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9408 23 199 3.40.50.720
af_P9WN71_8_168_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9317 23 196 3.40.50.720
af_P0AC53_13_173_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.929 26 197 3.40.50.720
af_P0AC53_13_173_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9179 26 197 3.40.50.720
af_P9WN73_32_206_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9146 26 201 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2E2DRY9-F1-model_v4 deleted 0.9673 19 105
AF-A0A3L7VA12-F1-model_v4 Glucose-6-phosphate dehydrogenase 0.9659 21 118 GO:0004345
GO:0005829
GO:0006006
GO:0009051
GO:0050661
AF-A0A8A7R1Z5-F1-model_v4 deleted 0.9633 17 119
AF-A0A3D2DFC7-F1-model_v4 deleted 0.9598 19 118
AF-A0A3N5K604-F1-model_v4 Glucose-6-phosphate dehydrogenase 0.9531 20 108 GO:0004345
GO:0005829
GO:0006006
GO:0009051
GO:0050661

Feature Viewer

pLDDT pTM Quality
76.59 0.81 High
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Predicted Structure (AlphaFold2)

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