F170764

General Info

Members Datasets Scaffolds Average Seq Length
137 103 133 256

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0030501|Ga0453684_0030501_808_1680
Length 290
Sequence MRRTYKYVAVTRLERNAADGLFAKPSYLDMCLILLANDAHPIYRLILAANRDEFYERPTASAGYWEDAPQILAGRDLKDGGTWLGITRSGEIAALTNFRDPGSERRDAPSRGRLVSGFLNGSRSMEEYLETLRYEGRSYNGFNLIFGDPARLCWYCNRHKRERFLAAGIHGLSNSLLDSPWPKVSRGKEALARIIEEGSEIGEEQLLSLLSDRTLPPDGELPDTGVGIELERLLSPIFISSPTYGTRSSTVILVDRKNYVTFVERSFNGHRENPTEKRWCFTIDRETRPA

Samples

Sample ID Description Type Environment
1 2547132512 Azospira oryzae 6a3 Isolate Unclassified
2 2908446538 Pseudomonas sp. R76 Isolate Rhizosphere
3 2946006987 Pseudomonas sp. W3I7 Isolate Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
18 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
22 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
26 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
27 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
30 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
41 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
42 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
43 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
44 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
47 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
48 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
49 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
50 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
51 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
52 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
53 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
54 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
55 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
56 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
57 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
58 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
61 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
62 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
63 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
64 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
65 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
66 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
67 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
68 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
69 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
70 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
71 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
72 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
73 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
74 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
75 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
76 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
77 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
78 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
79 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
80 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
84 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
85 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
86 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
87 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
88 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
89 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
90 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
93 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
94 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
95 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
96 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
97 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
98 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
99 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
100 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
101 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
102 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
103 8055817908 Pseudomonas pergaminensis 1008 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.08
Metatranscriptomes 0
Isolates 2.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.68
Nodule 0
Rhizoplane 0.73
Rhizosphere 83.94
Stem 0
Stem Tuber 0
Unclassified 3.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10015678 3300005328 Bacteria 4183
2 Ga0070690_100180515 3300005330 Bacteria 1458
3 Ga0070670_100006324 3300005331 Bacteria 10023
4 Ga0070670_100085289 3300005331 Bacteria 2713
5 Ga0068869_100059984 3300005334 Bacteria 2787
6 Ga0068868_100077004 3300005338 Bacteria 2668
7 Ga0068868_100132848 3300005338 Bacteria 2038
8 Ga0070671_100003243 3300005355 Bacteria 12686
9 Ga0070659_100152674 3300005366 Bacteria 1885
10 Ga0068867_100282920 3300005459 Bacteria 1360
11 Ga0070707_100608859 3300005468 Bacteria 1055
12 Ga0070698_100496217 3300005471 Bacteria 1159
13 Ga0070672_100226767 3300005543 Bacteria 1568
14 Ga0070664_100308877 3300005564 Bacteria 1431
15 Ga0068863_100297093 3300005841 Bacteria 1566
16 Ga0068862_100408146 3300005844 Bacteria 1272
17 Ga0075368_10173623 3300006042 Bacteria 906
18 Ga0075363_100046406 3300006048 Bacteria 2304
19 Ga0075364_10350465 3300006051 Bacteria 1006
20 Ga0075370_10182765 3300006353 Bacteria 1234
21 Ga0105244_10139758 3300009036 Bacteria 1165
22 Ga0105245_10115687 3300009098 Bacteria 2499
23 Ga0105237_10138564 3300009545 Bacteria 2427
24 Ga0157374_10643916 3300013296 Bacteria 1071
25 Ga0163162_10306820 3300013306 Bacteria 1719
26 Ga0157375_10004625 3300013308 Bacteria 11962
27 Ga0163163_10195798 3300014325 Bacteria 2069
28 Ga0157379_10246343 3300014968 Bacteria 1621
29 Ga0207662_10008388 3300025918 Bacteria 5655
30 Ga0207644_10004517 3300025931 Bacteria 9040
31 Ga0207689_10034816 3300025942 Bacteria 4182
32 Ga0207679_10340585 3300025945 Bacteria 1304
33 Ga0207667_10451780 3300025949 Bacteria 1306
34 Ga0207677_10251216 3300026023 Bacteria 1436
35 Ga0207708_10121560 3300026075 Bacteria 2035
36 Ga0207676_10570800 3300026095 Unclassified 1083
37 Ga0207674_10221716 3300026116 Bacteria 1839
38 Ga0207683_10068030 3300026121 Bacteria 3143
39 Ga0209813_10131081 3300027866 Bacteria 882
40 Ga0265318_10038836 3300028577 Unclassified 1818
41 Ga0265330_10118392 3300031235 Unclassified 1129
42 Ga0265332_10000024 3300031238 Bacteria 209663
43 Ga0265332_10008856 3300031238 Bacteria 4503
44 Ga0265331_10001016 3300031250 Bacteria 21942
45 Ga0265316_10043166 3300031344 Unclassified 3598
46 Ga0307509_10018616 3300031507 Bacteria 7958
47 Ga0316575_10008135 3300031665 Bacteria 3812
48 Ga0316575_10117149 3300031665 Bacteria 1088
49 Ga0316579_10061955 3300031691 Bacteria 1761
50 Ga0265314_10000944 3300031711 Bacteria 34198
51 Ga0316578_10067225 3300031728 Bacteria 2118
52 Ga0316578_10152333 3300031728 Bacteria 1393
53 Ga0316577_10001299 3300031733 Bacteria 11678
54 Ga0316577_10047446 3300031733 Bacteria 2398
55 Ga0316577_10055563 3300031733 Bacteria 2209
56 Ga0316583_10009919 3300032133 Bacteria 3431
57 Ga0316583_10062118 3300032133 Bacteria 1308
58 Ga0316585_10002316 3300032137 Bacteria 5123
59 Ga0316580_10005670 3300032139 Bacteria 3658
60 Ga0373939_0037602 3300035114 Bacteria 1439
61 Ga0316574_0001816 3300035398 Bacteria 10378
62 Ga0316574_0262345 3300035398 Unclassified 1103
63 Ga0316574_0278599 3300035398 Bacteria 1065
64 Ga0316582_0056715 3300036647 Bacteria 2500
65 Ga0316582_0105101 3300036647 Bacteria 1874
66 Ga0316582_0134496 3300036647 Bacteria 1663
67 Ga0316582_0175187 3300036647 Bacteria 1458
68 Ga0316582_0208830 3300036647 Bacteria 1333
69 Ga0316582_0444993 3300036647 Bacteria 893
70 Ga0316584_0023989 3300036712 Bacteria 4460
71 Ga0316584_0032301 3300036712 Bacteria 3874
72 Ga0316584_0174326 3300036712 Bacteria 1594
73 Ga0316584_0413468 3300036712 Bacteria 959
74 Ga0436364_0988137 3300037853 Viruses 1054
75 Ga0400491_07880 3300038727 Bacteria 1899
76 Ga0242420_024672 3300038996 Bacteria 1090
77 Ga0400487_59983 3300039110 Bacteria 3032
78 Ga0451577_0054001 3300042876 Bacteria 3587
79 Ga0451577_0080539 3300042876 Bacteria 2904
80 Ga0451577_0295571 3300042876 Bacteria 1468
81 Ga0453683_0000164 3300044673 Bacteria 96920
82 Ga0453683_0017951 3300044673 Bacteria 4545
83 Ga0453684_0008651 3300044712 Bacteria 18119
84 Ga0453684_0022470 3300044712 Bacteria 9351
85 Ga0453684_0025748 3300044712 Bacteria 8529
86 Ga0453684_0027766 3300044712 Bacteria 8102
87 Ga0453684_0030501 3300044712 Bacteria 7615
88 Ga0453684_0046422 3300044712 Bacteria 5777
89 Ga0453684_0096446 3300044712 Bacteria 3632
90 Ga0453684_0343570 3300044712 Bacteria 1684
91 Ga0451576_0327749 3300045051 Bacteria 1603
92 Ga0451576_0506620 3300045051 Bacteria 1268
93 Ga0495617_081067 3300046452 Bacteria 1063
94 Ga0495650_0002769 3300046471 Bacteria 13494
95 Ga0495605_0000213 3300046474 Bacteria 71485
96 Ga0495607_0001374 3300046501 Bacteria 21632
97 Ga0495583_0033326 3300046506 Bacteria 2477
98 Ga0495610_0027390 3300046512 Bacteria 3029
99 Ga0495610_0083954 3300046512 Bacteria 1456
100 Ga0495620_0018499 3300046515 Bacteria 3449
101 Ga0495654_0107353 3300046530 Bacteria 1277
102 Ga0495654_0116470 3300046530 Bacteria 1213
103 Ga0495609_0000374 3300046538 Bacteria 38378
104 Ga0495634_0189115 3300046642 Bacteria 1285
105 Ga0495660_0021084 3300046810 Bacteria 3734
106 Ga0495660_0133697 3300046810 Bacteria 1241
107 Ga0495604_0216976 3300047317 Bacteria 1319
108 Ga0496107_0513218 3300048910 Bacteria 889
109 Ga0501034_0001085 3300049571 Bacteria 38426
110 Ga0501034_0010458 3300049571 Bacteria 9662
111 Ga0501039_0225379 3300049575 Bacteria 1473
112 Ga0501043_0101770 3300049579 Bacteria 2258
113 Ga0501067_0197419 3300049583 Bacteria 1121
114 Ga0501068_0000813 3300049584 Bacteria 16219
115 Ga0501069_0144041 3300049585 Unclassified 1368
116 Ga0501070_0162739 3300049586 Bacteria 1839
117 Ga0501072_0078457 3300049588 Bacteria 2614
118 Ga0501073_0001692 3300049589 Bacteria 16336
119 Ga0501074_0038687 3300049590 Bacteria 3455
120 Ga0501074_0218639 3300049590 Unclassified 1357
121 Ga0501080_0000614 3300049742 Bacteria 28250
122 Ga0501044_0089567 3300049823 Bacteria 3105
123 nmdc:mga03683_143673_c1 3300050489 Bacteria 1074
124 nmdc:mga00v17_28617_c1 3300050491 Bacteria 3265
125 nmdc:mga0yw44_234466_c1 3300050492 Bacteria 1219
126 nmdc:mga0k408_37457_c1 3300050493 Bacteria 2785
127 nmdc:mga06z11_116674_c1 3300050494 Bacteria 1485
128 nmdc:mga04h51_39147_c1 3300050495 Bacteria 1539
129 nmdc:mga07m45_39545_c1 3300050496 Bacteria 2636
130 Ga0500583_0035127 3300053092 Bacteria 2234
131 Ga0500555_005246 3300053103 Bacteria 3677
132 Ga0500568_0009645 3300053139 Bacteria 4574
133 Ga0500604_0000268 3300053151 Bacteria 14561

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046452 Ga0495617_081067 Ga0495617_081067_389_1039 216
2 3300009036 Ga0105244_10139758 Ga0105244_101397582 218
3 3300009545 Ga0105237_10138564 Ga0105237_101385643 230
4 3300005468 Ga0070707_100608859 Ga0070707_1006088592 235
5 3300005471 Ga0070698_100496217 Ga0070698_1004962171 235
6 3300036647 Ga0316582_0175187 Ga0316582_0175187_593_1348 238
7 3300032139 Ga0316580_10005670 Ga0316580_100056701 239
8 3300035398 Ga0316574_0001816 Ga0316574_0001816_485_1219 241
9 3300036647 Ga0316582_0444993 Ga0316582_0444993_17_751 241
10 iso_pu_bacteria 2908446538 2908452533 244
11 iso_pu_bacteria 2946006987 2946013335 244
12 iso_pu_bacteria 8055817908 8055823859 244
13 iso_pu_bacteria 2547132512 2548846782 245
14 3300036647 Ga0316582_0105101 Ga0316582_0105101_694_1443 246
15 3300036647 Ga0316582_0134496 Ga0316582_0134496_796_1539 246
16 3300031665 Ga0316575_10008135 Ga0316575_100081351 247
17 3300031728 Ga0316578_10152333 Ga0316578_101523331 247
18 3300032133 Ga0316583_10009919 Ga0316583_100099194 247
19 3300035398 Ga0316574_0278599 Ga0316574_0278599_233_985 247
20 3300036647 Ga0316582_0208830 Ga0316582_0208830_335_1087 247
21 3300036712 Ga0316584_0032301 Ga0316584_0032301_746_1498 247
22 3300005331 Ga0070670_100006324 Ga0070670_1000063242 248
23 3300006048 Ga0075363_100046406 Ga0075363_1000464062 248
24 3300013308 Ga0157375_10004625 Ga0157375_1000462511 248
25 3300027866 Ga0209813_10131081 Ga0209813_101310811 248
26 3300035398 Ga0316574_0262345 Ga0316574_0262345_22_777 248
27 3300036712 Ga0316584_0174326 Ga0316584_0174326_408_1163 248
28 3300046471 Ga0495650_0002769 Ga0495650_0002769_1453_2199 248
29 3300046474 Ga0495605_0000213 Ga0495605_0000213_68324_69070 248
30 3300046501 Ga0495607_0001374 Ga0495607_0001374_17035_17781 248
31 3300046506 Ga0495583_0033326 Ga0495583_0033326_1263_2009 248
32 3300046512 Ga0495610_0027390 Ga0495610_0027390_1881_2714 248
33 3300046512 Ga0495610_0083954 Ga0495610_0083954_210_956 248
34 3300046515 Ga0495620_0018499 Ga0495620_0018499_1276_2022 248
35 3300046530 Ga0495654_0107353 Ga0495654_0107353_107_853 248
36 3300046530 Ga0495654_0116470 Ga0495654_0116470_105_938 248
37 3300046538 Ga0495609_0000374 Ga0495609_0000374_35257_36003 248
38 3300046810 Ga0495660_0021084 Ga0495660_0021084_1848_2594 248
39 3300046810 Ga0495660_0133697 Ga0495660_0133697_336_1082 248
40 3300050494 nmdc:mga06z11_116674_c1 nmdc:mga06z11_116674_c1_41_832 248
41 3300050495 nmdc:mga04h51_39147_c1 nmdc:mga04h51_39147_c1_146_937 248
42 3300031238 Ga0265332_10000024 Ga0265332_10000024130 249
43 3300044673 Ga0453683_0017951 Ga0453683_0017951_3603_4367 252
44 3300049579 Ga0501043_0101770 Ga0501043_0101770_633_1391 252
45 3300049823 Ga0501044_0089567 Ga0501044_0089567_2273_3031 252
46 3300038727 Ga0400491_07880 Ga0400491_07880_608_1369 253
47 3300039110 Ga0400487_59983 Ga0400487_59983_567_1328 253
48 3300005334 Ga0068869_100059984 Ga0068869_1000599843 254
49 3300005338 Ga0068868_100132848 Ga0068868_1001328483 254
50 3300005366 Ga0070659_100152674 Ga0070659_1001526742 254
51 3300005564 Ga0070664_100308877 Ga0070664_1003088772 254
52 3300005844 Ga0068862_100408146 Ga0068862_1004081462 254
53 3300014968 Ga0157379_10246343 Ga0157379_102463433 254
54 3300026095 Ga0207676_10570800 Ga0207676_105708002 254
55 3300031733 Ga0316577_10001299 Ga0316577_100012994 254
56 3300005330 Ga0070690_100180515 Ga0070690_1001805151 255
57 3300005841 Ga0068863_100297093 Ga0068863_1002970932 255
58 3300014325 Ga0163163_10195798 Ga0163163_101957982 255
59 3300025942 Ga0207689_10034816 Ga0207689_100348167 255
60 3300025945 Ga0207679_10340585 Ga0207679_103405852 255
61 3300025949 Ga0207667_10451780 Ga0207667_104517802 255
62 3300031507 Ga0307509_10018616 Ga0307509_100186165 255
63 3300036712 Ga0316584_0413468 Ga0316584_0413468_172_948 255
64 3300044712 Ga0453684_0008651 Ga0453684_0008651_3176_3943 255
65 3300044712 Ga0453684_0096446 Ga0453684_0096446_2366_3133 255
66 3300046642 Ga0495634_0189115 Ga0495634_0189115_346_1131 255
67 3300047317 Ga0495604_0216976 Ga0495604_0216976_297_1082 255
68 3300031665 Ga0316575_10117149 Ga0316575_101171491 256
69 3300031691 Ga0316579_10061955 Ga0316579_100619551 256
70 3300031728 Ga0316578_10067225 Ga0316578_100672251 256
71 3300031733 Ga0316577_10047446 Ga0316577_100474463 256
72 3300032133 Ga0316583_10062118 Ga0316583_100621182 256
73 3300032137 Ga0316585_10002316 Ga0316585_100023166 256
74 3300042876 Ga0451577_0080539 Ga0451577_0080539_1928_2698 256
75 3300044712 Ga0453684_0343570 Ga0453684_0343570_779_1552 256
76 3300045051 Ga0451576_0327749 Ga0451576_0327749_778_1551 256
77 3300006042 Ga0075368_10173623 Ga0075368_101736231 257
78 3300006051 Ga0075364_10350465 Ga0075364_103504652 257
79 3300006353 Ga0075370_10182765 Ga0075370_101827651 257
80 3300031733 Ga0316577_10055563 Ga0316577_100555632 257
81 3300036712 Ga0316584_0023989 Ga0316584_0023989_3391_4164 257
82 3300044712 Ga0453684_0046422 Ga0453684_0046422_1665_2441 257
83 3300050489 nmdc:mga03683_143673_c1 nmdc:mga03683_143673_c1_172_963 257
84 3300050491 nmdc:mga00v17_28617_c1 nmdc:mga00v17_28617_c1_635_1426 257
85 3300050492 nmdc:mga0yw44_234466_c1 nmdc:mga0yw44_234466_c1_221_1012 257
86 3300050493 nmdc:mga0k408_37457_c1 nmdc:mga0k408_37457_c1_1441_2232 257
87 3300050496 nmdc:mga07m45_39545_c1 nmdc:mga07m45_39545_c1_670_1461 257
88 3300053092 Ga0500583_0035127 Ga0500583_0035127_1076_1855 257
89 3300053103 Ga0500555_005246 Ga0500555_005246_1721_2500 257
90 3300053139 Ga0500568_0009645 Ga0500568_0009645_2406_3185 257
91 3300053151 Ga0500604_0000268 Ga0500604_0000268_12325_13104 257
92 3300044673 Ga0453683_0000164 Ga0453683_0000164_50639_51418 258
93 3300044712 Ga0453684_0027766 Ga0453684_0027766_5104_5880 258
94 3300049571 Ga0501034_0001085 Ga0501034_0001085_3523_4299 258
95 3300049571 Ga0501034_0010458 Ga0501034_0010458_2065_2841 258
96 3300049588 Ga0501072_0078457 Ga0501072_0078457_1666_2442 258
97 3300049590 Ga0501074_0218639 Ga0501074_0218639_74_850 258
98 3300025918 Ga0207662_10008388 Ga0207662_100083885 259
99 3300045051 Ga0451576_0506620 Ga0451576_0506620_287_1066 259
100 3300013296 Ga0157374_10643916 Ga0157374_106439162 260
101 3300013306 Ga0163162_10306820 Ga0163162_103068202 260
102 3300005338 Ga0068868_100077004 Ga0068868_1000770042 261
103 3300005355 Ga0070671_100003243 Ga0070671_1000032438 261
104 3300025931 Ga0207644_10004517 Ga0207644_100045175 261
105 3300026023 Ga0207677_10251216 Ga0207677_102512162 261
106 3300035114 Ga0373939_0037602 Ga0373939_0037602_603_1409 261
107 3300038996 Ga0242420_024672 Ga0242420_024672_181_969 261
108 3300042876 Ga0451577_0054001 Ga0451577_0054001_1747_2532 261
109 3300042876 Ga0451577_0295571 Ga0451577_0295571_489_1274 261
110 3300044712 Ga0453684_0022470 Ga0453684_0022470_7687_8472 261
111 3300044712 Ga0453684_0025748 Ga0453684_0025748_6852_7637 261
112 3300044712 Ga0453684_0030501 Ga0453684_0030501_808_1680 261
113 3300048910 Ga0496107_0513218 Ga0496107_0513218_61_849 261
114 3300049575 Ga0501039_0225379 Ga0501039_0225379_592_1377 261
115 3300049583 Ga0501067_0197419 Ga0501067_0197419_279_1064 261
116 3300049584 Ga0501068_0000813 Ga0501068_0000813_13302_14087 261
117 3300049585 Ga0501069_0144041 Ga0501069_0144041_192_980 261
118 3300049586 Ga0501070_0162739 Ga0501070_0162739_43_828 261
119 3300049589 Ga0501073_0001692 Ga0501073_0001692_7731_8516 261
120 3300049590 Ga0501074_0038687 Ga0501074_0038687_1912_2697 261
121 3300049742 Ga0501080_0000614 Ga0501080_0000614_7287_8072 261
122 3300005459 Ga0068867_100282920 Ga0068867_1002829202 262
123 3300009098 Ga0105245_10115687 Ga0105245_101156873 262
124 3300026075 Ga0207708_10121560 Ga0207708_101215603 262
125 3300026121 Ga0207683_10068030 Ga0207683_100680303 262
126 3300028577 Ga0265318_10038836 Ga0265318_100388361 262
127 3300031235 Ga0265330_10118392 Ga0265330_101183922 262
128 3300031238 Ga0265332_10008856 Ga0265332_100088563 262
129 3300031250 Ga0265331_10001016 Ga0265331_1000101619 262
130 3300031344 Ga0265316_10043166 Ga0265316_100431664 262
131 3300031711 Ga0265314_10000944 Ga0265314_1000094429 262
132 3300036647 Ga0316582_0056715 Ga0316582_0056715_214_1002 262
133 3300037853 Ga0436364_0988137 Ga0436364_0988137_50_856 262
134 3300005328 Ga0070676_10015678 Ga0070676_100156784 263
135 3300005331 Ga0070670_100085289 Ga0070670_1000852891 263
136 3300005543 Ga0070672_100226767 Ga0070672_1002267672 263
137 3300026116 Ga0207674_10221716 Ga0207674_102217163 263

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05742

TANGO2

Transport and Golgi organisation 2

30

269

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7apk-assembly1.cif.gz_E structure of the human tho - uap56 complex 0.668 219 260
7znk-assembly1.cif.gz_E structure of an endogenous human trex complex bound to mrna 0.668 219 260
8ah9-assembly1.cif.gz_A de novo retro-aldolase rabetab-16.1 0.6605 219 256
4h1y-assembly1.cif.gz_P human ecto-5'-nucleotidase (cd73): crystal form ii (open) in complex with psb11552 0.6571 229 259
3p1v-assembly1.cif.gz_B crystal structure of a metallo-endopeptidases (bacova_00663) from bacteroides ovatus at 1.93 a resolution 0.6555 220 253
ID Description Score Start End Superfamily
af_A0A1D6JCY0_1_258_3.60.60.10 Alpha Beta;4-Layer Sandwich;Penicillin V Acylase; Chain A;Penicillin V Acylase; Chain A 0.9411 1 240 3.60.60.10
af_A0A2R8RVG3_1_257_3.60.60.10 Alpha Beta;4-Layer Sandwich;Penicillin V Acylase; Chain A;Penicillin V Acylase; Chain A 0.9235 1 237 3.60.60.10
af_Q22009_1_259_3.60.60.10 Alpha Beta;4-Layer Sandwich;Penicillin V Acylase; Chain A;Penicillin V Acylase; Chain A 0.8794 1 238 3.60.60.10
af_A0A1D6JCY0_1_258_3.60.60.10 Alpha Beta;4-Layer Sandwich;Penicillin V Acylase; Chain A;Penicillin V Acylase; Chain A 0.8739 1 240 3.60.60.10
af_Q9VYA8_1_263_3.60.60.10 Alpha Beta;4-Layer Sandwich;Penicillin V Acylase; Chain A;Penicillin V Acylase; Chain A 0.8721 1 238 3.60.60.10
ID Description Score Start End GO Terms
AF-A0A1F3ZWD3-F1-model_v4 NRDE family protein 0.983 1 255
AF-A0A1F3ZWD3-F1-model_v4 NRDE family protein 0.9792 1 255
AF-A0A317H6P0-F1-model_v4 NRDE family protein 0.9783 1 260
AF-A0A523KUY6-F1-model_v4 NRDE family protein 0.9782 1 256
AF-G8QPA7-F1-model_v4 NRDE family protein 0.9767 1 255

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pLDDT pTM Quality
92.73 0.91 High
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Predicted Structure (AlphaFold2)

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