F170965

General Info

Members Datasets Scaffolds Average Seq Length
137 112 274 610

Family's Representative Sequence

Representative Sequence 3300046642|Ga0495634_0000028|Ga0495634_0000028_63461_65359
Length 632
Sequence LSATEQRTLSAICEAMAPALDGLPAAEREVDVSGPVGEFLTSLSPRVLTRVRLGLRAFEWLPFPWRFSRLDLAAREDFLRRMEGSRFALYHELILMAKTFTTLGYAVDSRVEQRLGLETSCRVEDGAQPEPAGPLGDLEPAGEGEECDVVIVGSGAGGAVAAATLAEAGLDVILLEAGDSYNRDNYPESRLDAIASLYRDCGLTIAEGRPPIPVPVAKAVGGTTVINSGTCFRAPEHVLDNWRDRYGVSWADRLDPDFAEAEEFLRVTPLDPERMGRNGQLAMEGAAAIGASGGPISRNAGNCVQCSSCPYGCRIDAKRGMHVSYVPRAVAAGARLRTGVEARRVLVEDGRAVGVSCVAKPAGELNGNRRSYAVRARRATIVAGGALGTPELLLRSGLGGSQVGRNLHIHPACWVGARYEEEVRGWEGVMQSYYVDEWEAERVLLEATFTPLPFGGAWLQGSGREHQEAILDFGHISSIGVQLTDESAGRVGVARDGSIRASYKLSDEDAQRVVFGIARAAEIHFAAGATEVYPNIGRAPVLRPGGVTEFEATRFKPSELRLEAFHPMGTARIAADPAEGVCAADGSVNGVTGLHVADASLFPTAVGVNPMMTIIAFAKQIAAGVAEASPAT

Samples

Sample ID Description Type Environment
1 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
60 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
61 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
62 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
63 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
64 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
65 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
66 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
72 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
73 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
74 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
75 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
76 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
77 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
78 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
79 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
80 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
81 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
82 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
83 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
84 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
85 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
86 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
87 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
88 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
89 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
90 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
91 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
92 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
93 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
94 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
95 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
96 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
97 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
98 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
99 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
100 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
101 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
102 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
108 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
109 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
110 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
111 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
112 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 15.33
Rhizosphere 84.67
Stem 0
Stem Tuber 0
Unclassified 0.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495634_0000028 3300046642 Bacteria 114075
2 JGI24748J21848_1000887 3300002074 Bacteria 3243
3 JGI24034J26672_10000331 3300002239 Bacteria 6067
4 JGI24742J22300_10002790 3300002244 Bacteria 2819
5 Ga0070670_100007681 3300005331 Bacteria 9166
6 Ga0070682_100000171 3300005337 Bacteria 48470
7 Ga0070691_10000018 3300005341 Bacteria 47284
8 Ga0070691_10011785 3300005341 Bacteria 4000
9 Ga0070661_100000035 3300005344 Bacteria 111363
10 Ga0070668_100028132 3300005347 Bacteria 4268
11 Ga0070674_100000012 3300005356 Bacteria 130773
12 Ga0070688_100000779 3300005365 Bacteria 15782
13 Ga0070667_100006662 3300005367 Bacteria 9601
14 Ga0070678_100009560 3300005456 Bacteria 5882
15 Ga0070685_10000159 3300005466 Bacteria 43951
16 Ga0070685_10000853 3300005466 Bacteria 16592
17 Ga0070672_100000006 3300005543 Bacteria 117060
18 Ga0070665_100033880 3300005548 Bacteria 5138
19 Ga0070664_100141051 3300005564 Bacteria 2122
20 Ga0068854_100000237 3300005578 Bacteria 37524
21 Ga0068856_100000925 3300005614 Bacteria 31449
22 Ga0068856_100017100 3300005614 Bacteria 7031
23 Ga0068852_100000170 3300005616 Bacteria 43748
24 Ga0068864_100000015 3300005618 Bacteria 303368
25 Ga0068866_10000062 3300005718 Bacteria 42082
26 Ga0068851_10005592 3300005834 Bacteria 5703
27 Ga0068863_100006652 3300005841 Bacteria 11345
28 Ga0068858_100000075 3300005842 Bacteria 104349
29 Ga0068862_100002829 3300005844 Bacteria 15219
30 Ga0075433_10015784 3300006852 Bacteria 6208
31 Ga0068865_100000140 3300006881 Bacteria 38055
32 Ga0105245_10021350 3300009098 Bacteria 5679
33 Ga0105248_10000008 3300009177 Bacteria 403910
34 Ga0105249_10052678 3300009553 Bacteria 3717
35 Ga0157370_10001872 3300013104 Bacteria 25939
36 Ga0157370_10049831 3300013104 Bacteria 4006
37 Ga0157369_10000078 3300013105 Bacteria 135173
38 Ga0157374_10000686 3300013296 Bacteria 29832
39 Ga0157372_10002315 3300013307 Bacteria 20647
40 Ga0157375_10000130 3300013308 Bacteria 74968
41 Ga0157375_10007080 3300013308 Bacteria 9796
42 Ga0157380_10000149 3300014326 Bacteria 39858
43 Ga0157379_10056702 3300014968 Bacteria 3500
44 Ga0207656_10006578 3300025321 Bacteria 4188
45 Ga0207642_10000558 3300025899 Bacteria 11452
46 Ga0207687_10011704 3300025927 Bacteria 5738
47 Ga0207669_10000017 3300025937 Bacteria 119878
48 Ga0207704_10000360 3300025938 Bacteria 21224
49 Ga0207691_10000025 3300025940 Bacteria 129424
50 Ga0207711_10000006 3300025941 Bacteria 792692
51 Ga0207679_10007285 3300025945 Bacteria 7010
52 Ga0207712_10013637 3300025961 Bacteria 5211
53 Ga0207640_10000248 3300025981 Bacteria 36585
54 Ga0207658_10022821 3300025986 Bacteria 4359
55 Ga0207703_10000088 3300026035 Bacteria 106080
56 Ga0207702_10000242 3300026078 Bacteria 63808
57 Ga0207702_10008270 3300026078 Bacteria 8790
58 Ga0207641_10036056 3300026088 Bacteria 4126
59 Ga0207676_10000018 3300026095 Bacteria 306375
60 Ga0207683_10042219 3300026121 Bacteria 3983
61 Ga0207698_10000042 3300026142 Bacteria 97349
62 Ga0268266_10001339 3300028379 Bacteria 29819
63 Ga0268265_10001933 3300028380 Bacteria 16442
64 Ga0268264_10045244 3300028381 Bacteria 3654
65 Ga0265337_1000287 3300028556 Bacteria 27334
66 Ga0265326_10000229 3300028558 Bacteria 26997
67 Ga0265322_10000020 3300028654 Bacteria 108805
68 Ga0265324_10000360 3300029957 Bacteria 33003
69 Ga0265332_10009408 3300031238 Bacteria 4362
70 Ga0265328_10012143 3300031239 Bacteria 3430
71 Ga0265320_10000035 3300031240 Bacteria 137855
72 Ga0265331_10003207 3300031250 Bacteria 10668
73 Ga0265327_10000015 3300031251 Bacteria 496677
74 Ga0265316_10013674 3300031344 Bacteria 7198
75 Ga0265314_10002307 3300031711 Bacteria 19713
76 Ga0307415_100022293 3300032126 Bacteria 3905
77 Ga0495603_0001286 3300046455 Bacteria 14630
78 Ga0495629_0000691 3300046459 Bacteria 27311
79 Ga0495662_0013266 3300046476 Bacteria 4011
80 Ga0495608_0000036 3300046511 Bacteria 129609
81 Ga0495628_0001454 3300046516 Bacteria 21724
82 Ga0495630_0000012 3300046517 Bacteria 223330
83 Ga0495630_0000175 3300046517 Bacteria 49924
84 Ga0495652_0000023 3300046529 Bacteria 168049
85 Ga0495652_0001413 3300046529 Bacteria 26631
86 Ga0495586_0004091 3300046535 Bacteria 7815
87 Ga0495645_0026660 3300046543 Bacteria 4195
88 Ga0495667_0000034 3300046559 Bacteria 141464
89 Ga0495656_0000557 3300046615 Bacteria 12182
90 Ga0495634_0002025 3300046642 Bacteria 17228
91 Ga0495634_0002740 3300046642 Bacteria 14492
92 Ga0495635_0053692 3300046663 Bacteria 2776
93 Ga0495588_0000149 3300046674 Bacteria 100598
94 Ga0495657_0000001 3300046675 Bacteria 445641
95 Ga0495647_0000047 3300046681 Bacteria 35186
96 Ga0495658_0040924 3300046683 Bacteria 2578
97 Ga0495624_0000038 3300046690 Bacteria 83368
98 Ga0495604_0018520 3300047317 Bacteria 5578
99 Ga0495676_0002025 3300047321 Bacteria 17856
100 Ga0495676_0011760 3300047321 Bacteria 7892
101 Ga0495680_0078413 3300047322 Unclassified 2500
102 Ga0495675_0000037 3300047444 Bacteria 91283
103 Ga0495602_0000166 3300048088 Bacteria 61220
104 Ga0495602_0013145 3300048088 Bacteria 8469
105 Ga0496100_0000005 3300048903 Bacteria 312112
106 Ga0496101_0000022 3300048904 Bacteria 216728
107 Ga0496104_0001895 3300048907 Bacteria 18118
108 Ga0496105_0000098 3300048908 Bacteria 59301
109 Ga0496106_0000087 3300048909 Bacteria 73787
110 Ga0496106_0000440 3300048909 Bacteria 29633
111 Ga0496107_0000046 3300048910 Bacteria 67209
112 Ga0496108_0000005 3300048911 Bacteria 535059
113 Ga0496108_0000365 3300048911 Bacteria 38077
114 Ga0496109_0000095 3300048912 Bacteria 91702
115 Ga0496109_0000174 3300048912 Bacteria 63794
116 Ga0496109_0060632 3300048912 Bacteria 3457
117 Ga0496110_0000011 3300048913 Bacteria 97293
118 Ga0496110_0010692 3300048913 Bacteria 7475
119 Ga0496111_0000170 3300048914 Bacteria 29627
120 Ga0496112_0001176 3300048915 Bacteria 19620
121 Ga0496113_0000202 3300048916 Bacteria 27530
122 Ga0496113_0068895 3300048916 Bacteria 2686
123 Ga0496114_0000054 3300048917 Bacteria 98328
124 Ga0496115_0000010 3300048918 Bacteria 227112
125 Ga0496115_0000334 3300048918 Bacteria 40085
126 Ga0501072_0018359 3300049588 Bacteria 5384
127 nmdc:mga0a205_45_c1 3300050515 Bacteria 68070
128 nmdc:mga0a205_934_c2 3300050515 Bacteria 7669
129 Ga0495601_0056211 3300053077 Bacteria 2492
130 Ga0495612_0000217 3300053078 Bacteria 24406
131 Ga0495595_0000002 3300053084 Bacteria 445641
132 Ga0495619_0000008 3300053085 Bacteria 305999
133 Ga0495619_0000037 3300053085 Bacteria 124007
134 Ga0495619_0000541 3300053085 Bacteria 24974
135 Ga0495619_0000596 3300053085 Bacteria 23953
136 Ga0495619_0002019 3300053085 Bacteria 13492
137 Ga0495619_0002234 3300053085 Bacteria 12803
138 Ga0495634_0000028
139 JGI24748J21848_1000887
140 JGI24034J26672_10000331
141 JGI24742J22300_10002790
142 Ga0070670_100007681
143 Ga0070682_100000171
144 Ga0070691_10000018
145 Ga0070691_10011785
146 Ga0070661_100000035
147 Ga0070668_100028132
148 Ga0070674_100000012
149 Ga0070688_100000779
150 Ga0070667_100006662
151 Ga0070678_100009560
152 Ga0070685_10000159
153 Ga0070685_10000853
154 Ga0070672_100000006
155 Ga0070665_100033880
156 Ga0070664_100141051
157 Ga0068854_100000237
158 Ga0068856_100000925
159 Ga0068856_100017100
160 Ga0068852_100000170
161 Ga0068864_100000015
162 Ga0068866_10000062
163 Ga0068851_10005592
164 Ga0068863_100006652
165 Ga0068858_100000075
166 Ga0068862_100002829
167 Ga0075433_10015784
168 Ga0068865_100000140
169 Ga0105245_10021350
170 Ga0105248_10000008
171 Ga0105249_10052678
172 Ga0157370_10001872
173 Ga0157370_10049831
174 Ga0157369_10000078
175 Ga0157374_10000686
176 Ga0157372_10002315
177 Ga0157375_10000130
178 Ga0157375_10007080
179 Ga0157380_10000149
180 Ga0157379_10056702
181 Ga0207656_10006578
182 Ga0207642_10000558
183 Ga0207687_10011704
184 Ga0207669_10000017
185 Ga0207704_10000360
186 Ga0207691_10000025
187 Ga0207711_10000006
188 Ga0207679_10007285
189 Ga0207712_10013637
190 Ga0207640_10000248
191 Ga0207658_10022821
192 Ga0207703_10000088
193 Ga0207702_10000242
194 Ga0207702_10008270
195 Ga0207641_10036056
196 Ga0207676_10000018
197 Ga0207683_10042219
198 Ga0207698_10000042
199 Ga0268266_10001339
200 Ga0268265_10001933
201 Ga0268264_10045244
202 Ga0265337_1000287
203 Ga0265326_10000229
204 Ga0265322_10000020
205 Ga0265324_10000360
206 Ga0265332_10009408
207 Ga0265328_10012143
208 Ga0265320_10000035
209 Ga0265331_10003207
210 Ga0265327_10000015
211 Ga0265316_10013674
212 Ga0265314_10002307
213 Ga0307415_100022293
214 Ga0495603_0001286
215 Ga0495629_0000691
216 Ga0495662_0013266
217 Ga0495608_0000036
218 Ga0495628_0001454
219 Ga0495630_0000012
220 Ga0495630_0000175
221 Ga0495652_0000023
222 Ga0495652_0001413
223 Ga0495586_0004091
224 Ga0495645_0026660
225 Ga0495667_0000034
226 Ga0495656_0000557
227 Ga0495634_0002025
228 Ga0495634_0002740
229 Ga0495635_0053692
230 Ga0495588_0000149
231 Ga0495657_0000001
232 Ga0495647_0000047
233 Ga0495658_0040924
234 Ga0495624_0000038
235 Ga0495604_0018520
236 Ga0495676_0002025
237 Ga0495676_0011760
238 Ga0495680_0078413
239 Ga0495675_0000037
240 Ga0495602_0000166
241 Ga0495602_0013145
242 Ga0496100_0000005
243 Ga0496101_0000022
244 Ga0496104_0001895
245 Ga0496105_0000098
246 Ga0496106_0000087
247 Ga0496106_0000440
248 Ga0496107_0000046
249 Ga0496108_0000005
250 Ga0496108_0000365
251 Ga0496109_0000095
252 Ga0496109_0000174
253 Ga0496109_0060632
254 Ga0496110_0000011
255 Ga0496110_0010692
256 Ga0496111_0000170
257 Ga0496112_0001176
258 Ga0496113_0000202
259 Ga0496113_0068895
260 Ga0496114_0000054
261 Ga0496115_0000010
262 Ga0496115_0000334
263 Ga0501072_0018359
264 nmdc:mga0a205_45_c1
265 nmdc:mga0a205_934_c2
266 Ga0495601_0056211
267 Ga0495612_0000217
268 Ga0495595_0000002
269 Ga0495619_0000008
270 Ga0495619_0000037
271 Ga0495619_0000541
272 Ga0495619_0000596
273 Ga0495619_0002019
274 Ga0495619_0002234

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00732

GMC_oxred_N

GMC oxidoreductase

194

412

0.95

PF00890

FAD_binding_2

FAD binding domain

148

183

0.95

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

151

200

0.93

PF01494

FAD_binding_3

FAD binding domain

146

190

0.91

PF05199

GMC_oxred_C

GMC oxidoreductase

485

618

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5mh4-assembly1.cif.gz_A crystal structure of lactococcus lactis thioredoxin reductase (fr conformation) 0.9908 132 163
4zn0-assembly2.cif.gz_D structure of the nadph-dependent thioredoxin reductase from methanosarcina mazei 0.9874 132 161
4zn0-assembly2.cif.gz_B structure of the nadph-dependent thioredoxin reductase from methanosarcina mazei 0.9748 130 161
6gnc-assembly1.cif.gz_A-2 crystal structure of a ferredoxin-flavin thioredoxin reductase from clostridium acetobutylicum at 1.64 a resolution 0.9531 130 161
5ocm-assembly1.cif.gz_A imine reductase from streptosporangium roseum in complex with nadp+ and 2,2,2-trifluoroacetophenone hydrate 0.9292 130 159
ID Description Score Start End Superfamily
5miqA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9943 133 163 3.50.50.60
5a9sB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9671 133 159 3.40.50.720
af_Q2FVP8_1_145_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9669 132 164 3.50.50.60
4mo2B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9612 132 165 3.40.50.720
af_Q4DB76_342_532_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9587 133 163 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7V9CAZ6-F1-model_v4 Glucose-methanol-choline oxidoreductase C-terminal domain-containing protein 0.9494 387 612 GO:0016614
AF-A0A1M3BF75-F1-model_v4 Glucose-methanol-choline oxidoreductase N-terminal domain-containing protein 0.9475 201 616 GO:0016614
GO:0050660
AF-A0A520Q7D7-F1-model_v4 GMC family oxidoreductase 0.9453 266 609 GO:0016614
GO:0050660
AF-A0A7V3S049-F1-model_v4 GMC family oxidoreductase 0.943 260 612 GO:0016614
GO:0046872
GO:0050660
GO:0051536
AF-A0A847F5B2-F1-model_v4 Glucose-methanol-choline oxidoreductase C-terminal domain-containing protein 0.9416 400 613 GO:0016614

Map