F174066

General Info

Members Datasets Scaffolds Average Seq Length
138 91 138 353

Family's Representative Sequence

Representative Sequence 3300046454|Ga0495592_0000101|Ga0495592_0000101_12606_13766
Length 386
Sequence MSIRTRLTLWYTGVLFASLLMMAALSYHEFVVEPRNVAHEKQTNPNFVDNDPDANDDRALEAFDIVLTCGIPAAILALAGGWWLMRKALAPVIALTRAVERVHEGNLGAQLPRTGARDEFDRLTEVFNEMSARLNHSFQRIREFTLHASHELKTPLTVLRGEIETELQHEGVPEDLRERLFGQLDEVQRLSKIVDGLTLLTKADAGQVVLQLETVRLDELVRDAFEDAQILAKAGNVRVALGDCDAATIRGDRHRMRQLLLNLTDNAIKYNQSGGAVDIELKCVGGSVGQLTISNTGKGIPPELVTRVFDRFFRGDASHSTAVDGCGLGLSVAKWIVSAHDGSIRLTSLPDEFTRVVVTLPLEPSYKPAIAEPVTEKTVALATARN

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
8 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
15 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
19 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
20 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
21 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
22 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
29 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
30 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
31 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
32 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
33 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
34 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
35 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
36 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
37 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
38 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
39 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
40 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
41 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
42 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
43 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
44 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
45 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
46 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
47 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
48 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
49 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
50 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
51 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
52 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
53 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
54 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
55 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
56 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
57 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
58 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
59 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
60 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
63 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
64 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
65 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
66 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
67 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
68 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
69 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
70 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
71 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
72 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
73 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
74 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
75 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
76 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
77 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
78 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
79 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
80 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
81 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
82 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.72
Rhizosphere 97.83
Stem 0
Stem Tuber 0
Unclassified 1.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10013767 3300003320 Bacteria 13331
2 rootH1_10087098 3300003323 Unclassified 2425
3 Ga0070690_100026378 3300005330 Bacteria 3584
4 Ga0070714_100005909 3300005435 Bacteria 9390
5 Ga0070700_100069797 3300005441 Bacteria 2238
6 Ga0070681_10080602 3300005458 Bacteria 3211
7 Ga0070685_10075791 3300005466 Bacteria 2004
8 Ga0068853_100237330 3300005539 Unclassified 1670
9 Ga0068855_100008467 3300005563 Bacteria 12438
10 Ga0068855_100138109 3300005563 Bacteria 2780
11 Ga0068857_100001201 3300005577 Bacteria 20213
12 Ga0068856_100078308 3300005614 Bacteria 3277
13 Ga0068856_100218551 3300005614 Bacteria 1921
14 Ga0068859_100019519 3300005617 Bacteria 6810
15 Ga0068863_100194505 3300005841 Unclassified 1950
16 Ga0075429_100021629 3300006880 Bacteria 5576
17 Ga0097620_100019519 3300006931 Bacteria 6810
18 Ga0105240_10027827 3300009093 Bacteria 7397
19 Ga0105240_10067715 3300009093 Bacteria 4425
20 Ga0105240_10140983 3300009093 Bacteria 2882
21 Ga0105240_10312958 3300009093 Bacteria 1792
22 Ga0114129_10040228 3300009147 Bacteria 6590
23 Ga0114129_10517260 3300009147 Unclassified 1556
24 Ga0105238_10004426 3300009551 Bacteria 13932
25 Ga0105238_10021764 3300009551 Bacteria 6531
26 Ga0157370_10034041 3300013104 Bacteria 4964
27 Ga0157372_10215513 3300013307 Bacteria 2225
28 Ga0163163_10000018 3300014325 Bacteria 199503
29 Ga0163163_10041136 3300014325 Bacteria 4518
30 Ga0207687_10379342 3300025927 Bacteria 1158
31 Ga0207664_10005477 3300025929 Bacteria 8685
32 Ga0207667_10043818 3300025949 Unclassified 4747
33 Ga0207667_10174556 3300025949 Bacteria 2208
34 Ga0207712_10266920 3300025961 Bacteria 1390
35 Ga0207702_10033913 3300026078 Bacteria 4266
36 Ga0207674_10012711 3300026116 Bacteria 9408
37 Ga0265337_1000188 3300028556 Bacteria 32521
38 Ga0265337_1005531 3300028556 Bacteria 5009
39 Ga0265337_1018451 3300028556 Bacteria 2216
40 Ga0265326_10035700 3300028558 Bacteria 1414
41 Ga0265336_10000240 3300028666 Bacteria 39084
42 Ga0265338_10001431 3300028800 Bacteria 38817
43 Ga0265338_10003563 3300028800 Bacteria 21763
44 Ga0265338_10003590 3300028800 Bacteria 21650
45 Ga0265338_10005485 3300028800 Bacteria 16542
46 Ga0265338_10006159 3300028800 Bacteria 15389
47 Ga0265338_10013515 3300028800 Bacteria 9206
48 Ga0265338_10020163 3300028800 Bacteria 7028
49 Ga0265338_10066556 3300028800 Bacteria 3118
50 Ga0265338_10245917 3300028800 Unclassified 1322
51 Ga0265324_10005746 3300029957 Bacteria 5287
52 Ga0265324_10026303 3300029957 Bacteria 2060
53 Ga0265328_10036200 3300031239 Bacteria 1824
54 Ga0265320_10005690 3300031240 Bacteria 7953
55 Ga0265320_10033500 3300031240 Bacteria 2622
56 Ga0265325_10021274 3300031241 Bacteria 3566
57 Ga0265329_10009191 3300031242 Bacteria 3701
58 Ga0265327_10005097 3300031251 Bacteria 11180
59 Ga0265316_10012199 3300031344 Bacteria 7712
60 Ga0265316_10056941 3300031344 Unclassified 3050
61 Ga0265316_10073611 3300031344 Bacteria 2631
62 Ga0265314_10000174 3300031711 Bacteria 95226
63 Ga0265314_10047056 3300031711 Bacteria 3039
64 Ga0373930_0000687 3300034816 Bacteria 4745
65 Ga0373950_0002012 3300034818 Bacteria 2749
66 Ga0373928_0000069 3300035084 Bacteria 17972
67 Ga0373944_0000122 3300035089 Bacteria 14607
68 Ga0373949_0000865 3300035090 Bacteria 9557
69 Ga0373951_0001077 3300035091 Bacteria 7305
70 Ga0373932_0000001 3300035112 Bacteria 1459067
71 Ga0373945_0018827 3300035116 Bacteria 2352
72 Ga0373946_0026996 3300035171 Bacteria 2269
73 Ga0373962_0000033 3300035242 Bacteria 33867
74 Ga0373924_0009856 3300035410 Bacteria 3512
75 Ga0373931_0000002 3300035691 Bacteria 599830
76 Ga0373935_0060497 3300035692 Unclassified 2423
77 Ga0373927_0003007 3300035695 Bacteria 12237
78 Ga0373933_0067254 3300035724 Bacteria 2173
79 Ga0373947_0027348 3300035725 Bacteria 3338
80 Ga0373937_0038297 3300036401 Bacteria 4369
81 Ga0316584_0049252 3300036712 Bacteria 3149
82 Ga0373925_0000121 3300037068 Bacteria 84624
83 Ga0373925_0059604 3300037068 Bacteria 2863
84 Ga0373925_0135232 3300037068 Bacteria 1926
85 Ga0451577_0177127 3300042876 Bacteria 1922
86 Ga0453683_0000582 3300044673 Bacteria 40455
87 Ga0453684_0039552 3300044712 Bacteria 6424
88 Ga0451576_0048664 3300045051 Bacteria 4451
89 Ga0451576_0124098 3300045051 Bacteria 2690
90 Ga0451576_0138362 3300045051 Bacteria 2540
91 Ga0451576_0143782 3300045051 Bacteria 2487
92 Ga0495592_0000101 3300046454 Bacteria 75856
93 Ga0495592_0077671 3300046454 Bacteria 2406
94 Ga0495641_0013748 3300046461 Bacteria 4424
95 Ga0495662_0062587 3300046476 Bacteria 1797
96 Ga0495618_0003223 3300046514 Bacteria 10223
97 Ga0495628_0003986 3300046516 Bacteria 13155
98 Ga0495630_0000077 3300046517 Bacteria 76692
99 Ga0495630_0030878 3300046517 Bacteria 3988
100 Ga0495630_0153770 3300046517 Bacteria 1751
101 Ga0495630_0194527 3300046517 Bacteria 1547
102 Ga0495640_0015103 3300046533 Bacteria 5817
103 Ga0495586_0000044 3300046535 Bacteria 74379
104 Ga0495586_0028332 3300046535 Bacteria 2997
105 Ga0495645_0010240 3300046543 Bacteria 6569
106 Ga0495645_0023124 3300046543 Bacteria 4500
107 Ga0495645_0030970 3300046543 Bacteria 3897
108 Ga0495634_0013249 3300046642 Bacteria 5962
109 Ga0495634_0019643 3300046642 Unclassified 4799
110 Ga0495657_0053497 3300046675 Bacteria 2701
111 Ga0495599_0008681 3300046678 Bacteria 6184
112 Ga0495599_0032201 3300046678 Bacteria 3291
113 Ga0495647_0000495 3300046681 Bacteria 11438
114 Ga0495658_0009939 3300046683 Bacteria 4747
115 Ga0495658_0012244 3300046683 Bacteria 4337
116 Ga0495613_0007444 3300046689 Bacteria 8159
117 Ga0495613_0025281 3300046689 Bacteria 4425
118 Ga0495624_0187945 3300046690 Bacteria 1257
119 Ga0495674_0001878 3300047319 Bacteria 20678
120 Ga0495676_0008303 3300047321 Bacteria 9520
121 Ga0495676_0119722 3300047321 Bacteria 1917
122 Ga0496115_0000848 3300048918 Bacteria 22216
123 Ga0501031_0000333 3300049568 Bacteria 27321
124 Ga0501032_0003670 3300049569 Bacteria 11676
125 Ga0501032_0020476 3300049569 Bacteria 4606
126 Ga0501033_0000689 3300049570 Bacteria 31303
127 Ga0501033_0103806 3300049570 Bacteria 2072
128 Ga0501036_0120465 3300049572 Bacteria 2216
129 Ga0501043_0039663 3300049579 Bacteria 3701
130 Ga0501043_0096178 3300049579 Bacteria 2328
131 Ga0501046_0105695 3300049580 Unclassified 2156
132 Ga0501035_0022241 3300049822 Bacteria 5823
133 Ga0501035_0054260 3300049822 Bacteria 3581
134 Ga0501044_0000125 3300049823 Bacteria 92969
135 Ga0501044_0053537 3300049823 Bacteria 4151
136 nmdc:mga05p37_185133_c1 3300050507 Bacteria 2532
137 nmdc:mga05p37_570402_c1 3300050507 Unclassified 1284
138 Ga0495601_0110062 3300053077 Unclassified 1784

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049572 Ga0501036_0120465 Ga0501036_0120465_1313_2206 279
2 3300035116 Ga0373945_0018827 Ga0373945_0018827_1323_2342 307
3 3300053077 Ga0495601_0110062 Ga0495601_0110062_704_1753 307
4 3300035692 Ga0373935_0060497 Ga0373935_0060497_1165_2199 312
5 3300014325 Ga0163163_10000018 Ga0163163_10000018115 317
6 3300005466 Ga0070685_10075791 Ga0070685_100757912 318
7 3300009147 Ga0114129_10517260 Ga0114129_105172602 319
8 3300050507 nmdc:mga05p37_570402_c1 nmdc:mga05p37_570402_c1_260_1252 319
9 3300029957 Ga0265324_10005746 Ga0265324_100057465 321
10 3300035410 Ga0373924_0009856 Ga0373924_0009856_1415_2506 321
11 3300044673 Ga0453683_0000582 Ga0453683_0000582_30303_31418 321
12 3300046454 Ga0495592_0077671 Ga0495592_0077671_1210_2301 321
13 3300046517 Ga0495630_0194527 Ga0495630_0194527_446_1537 321
14 3300035724 Ga0373933_0067254 Ga0373933_0067254_610_1683 322
15 3300046683 Ga0495658_0012244 Ga0495658_0012244_475_1608 322
16 3300036712 Ga0316584_0049252 Ga0316584_0049252_1183_2223 326
17 3300036401 Ga0373937_0038297 Ga0373937_0038297_2341_3426 328
18 3300005614 Ga0068856_100218551 Ga0068856_1002185511 329
19 3300005563 Ga0068855_100008467 Ga0068855_1000084674 330
20 3300025949 Ga0207667_10043818 Ga0207667_100438183 330
21 3300005330 Ga0070690_100026378 Ga0070690_1000263782 332
22 3300031344 Ga0265316_10012199 Ga0265316_100121992 332
23 3300009093 Ga0105240_10312958 Ga0105240_103129582 333
24 3300026078 Ga0207702_10033913 Ga0207702_100339132 333
25 3300028556 Ga0265337_1018451 Ga0265337_10184512 333
26 3300028800 Ga0265338_10245917 Ga0265338_102459172 333
27 3300028556 Ga0265337_1000188 Ga0265337_100018812 334
28 3300028558 Ga0265326_10035700 Ga0265326_100357002 334
29 3300028666 Ga0265336_10000240 Ga0265336_1000024017 334
30 3300028800 Ga0265338_10001431 Ga0265338_1000143116 334
31 3300028800 Ga0265338_10003590 Ga0265338_100035904 334
32 3300028800 Ga0265338_10005485 Ga0265338_1000548510 334
33 3300031240 Ga0265320_10033500 Ga0265320_100335003 334
34 3300037068 Ga0373925_0135232 Ga0373925_0135232_536_1615 334
35 3300050507 nmdc:mga05p37_185133_c1 nmdc:mga05p37_185133_c1_726_1778 334
36 3300025949 Ga0207667_10174556 Ga0207667_101745563 335
37 3300034816 Ga0373930_0000687 Ga0373930_0000687_1369_2445 335
38 3300034818 Ga0373950_0002012 Ga0373950_0002012_1472_2548 335
39 3300035084 Ga0373928_0000069 Ga0373928_0000069_13828_14904 335
40 3300035089 Ga0373944_0000122 Ga0373944_0000122_7988_9064 335
41 3300035090 Ga0373949_0000865 Ga0373949_0000865_2800_3876 335
42 3300035091 Ga0373951_0001077 Ga0373951_0001077_3207_4283 335
43 3300035112 Ga0373932_0000001 Ga0373932_0000001_1354329_1355405 335
44 3300035171 Ga0373946_0026996 Ga0373946_0026996_339_1415 335
45 3300035242 Ga0373962_0000033 Ga0373962_0000033_24443_25519 335
46 3300035691 Ga0373931_0000002 Ga0373931_0000002_139993_141069 335
47 3300035725 Ga0373947_0027348 Ga0373947_0027348_96_1172 335
48 3300037068 Ga0373925_0000121 Ga0373925_0000121_73754_74830 335
49 3300029957 Ga0265324_10026303 Ga0265324_100263032 336
50 3300031251 Ga0265327_10005097 Ga0265327_100050976 336
51 3300025927 Ga0207687_10379342 Ga0207687_103793421 337
52 3300028800 Ga0265338_10006159 Ga0265338_100061596 337
53 3300046461 Ga0495641_0013748 Ga0495641_0013748_1238_2299 337
54 3300046476 Ga0495662_0062587 Ga0495662_0062587_556_1617 337
55 3300046533 Ga0495640_0015103 Ga0495640_0015103_2252_3313 337
56 3300046642 Ga0495634_0019643 Ga0495634_0019643_3409_4470 337
57 3300046681 Ga0495647_0000495 Ga0495647_0000495_3120_4181 337
58 3300046683 Ga0495658_0009939 Ga0495658_0009939_1963_3024 337
59 3300046689 Ga0495613_0007444 Ga0495613_0007444_957_2018 337
60 3300046690 Ga0495624_0187945 Ga0495624_0187945_154_1215 337
61 3300047321 Ga0495676_0119722 Ga0495676_0119722_232_1293 337
62 3300046543 Ga0495645_0030970 Ga0495645_0030970_1330_2409 338
63 3300046678 Ga0495599_0032201 Ga0495599_0032201_1782_2846 338
64 3300025961 Ga0207712_10266920 Ga0207712_102669201 339
65 3300028800 Ga0265338_10066556 Ga0265338_100665563 339
66 3300031240 Ga0265320_10005690 Ga0265320_100056904 339
67 3300031241 Ga0265325_10021274 Ga0265325_100212743 339
68 3300031711 Ga0265314_10047056 Ga0265314_100470562 339
69 3300003323 rootH1_10087098 rootH1_100870982 340
70 3300005435 Ga0070714_100005909 Ga0070714_1000059098 340
71 3300005458 Ga0070681_10080602 Ga0070681_100806023 340
72 3300005539 Ga0068853_100237330 Ga0068853_1002373301 340
73 3300005563 Ga0068855_100138109 Ga0068855_1001381092 340
74 3300005614 Ga0068856_100078308 Ga0068856_1000783082 340
75 3300009093 Ga0105240_10067715 Ga0105240_100677154 340
76 3300009093 Ga0105240_10140983 Ga0105240_101409833 340
77 3300009551 Ga0105238_10021764 Ga0105238_100217644 340
78 3300013104 Ga0157370_10034041 Ga0157370_100340413 340
79 3300013307 Ga0157372_10215513 Ga0157372_102155132 340
80 3300025929 Ga0207664_10005477 Ga0207664_100054778 340
81 3300028556 Ga0265337_1005531 Ga0265337_10055313 340
82 3300028800 Ga0265338_10003563 Ga0265338_1000356311 340
83 3300028800 Ga0265338_10013515 Ga0265338_100135151 340
84 3300028800 Ga0265338_10020163 Ga0265338_100201632 340
85 3300031344 Ga0265316_10073611 Ga0265316_100736112 340
86 3300035695 Ga0373927_0003007 Ga0373927_0003007_1519_2571 340
87 3300037068 Ga0373925_0059604 Ga0373925_0059604_1507_2559 340
88 3300042876 Ga0451577_0177127 Ga0451577_0177127_783_1850 340
89 3300045051 Ga0451576_0124098 Ga0451576_0124098_1138_2214 340
90 3300045051 Ga0451576_0138362 Ga0451576_0138362_674_1738 340
91 3300045051 Ga0451576_0143782 Ga0451576_0143782_108_1169 340
92 3300046675 Ga0495657_0053497 Ga0495657_0053497_734_1807 340
93 3300005441 Ga0070700_100069797 Ga0070700_1000697973 341
94 3300005577 Ga0068857_100001201 Ga0068857_10000120111 342
95 3300005617 Ga0068859_100019519 Ga0068859_1000195194 342
96 3300006880 Ga0075429_100021629 Ga0075429_1000216293 342
97 3300006931 Ga0097620_100019519 Ga0097620_1000195194 342
98 3300009147 Ga0114129_10040228 Ga0114129_100402288 342
99 3300026116 Ga0207674_10012711 Ga0207674_100127117 342
100 3300046517 Ga0495630_0153770 Ga0495630_0153770_179_1264 342
101 3300046543 Ga0495645_0010240 Ga0495645_0010240_1488_2564 342
102 3300048918 Ga0496115_0000848 Ga0496115_0000848_2585_3661 342
103 3300049568 Ga0501031_0000333 Ga0501031_0000333_5758_6822 342
104 3300049569 Ga0501032_0003670 Ga0501032_0003670_9666_10730 342
105 3300049569 Ga0501032_0020476 Ga0501032_0020476_2541_3632 342
106 3300049570 Ga0501033_0000689 Ga0501033_0000689_15497_16561 342
107 3300049570 Ga0501033_0103806 Ga0501033_0103806_550_1641 342
108 3300049579 Ga0501043_0039663 Ga0501043_0039663_1322_2413 342
109 3300049579 Ga0501043_0096178 Ga0501043_0096178_990_2054 342
110 3300049580 Ga0501046_0105695 Ga0501046_0105695_1042_2130 342
111 3300049822 Ga0501035_0022241 Ga0501035_0022241_4334_5398 342
112 3300049822 Ga0501035_0054260 Ga0501035_0054260_764_1855 342
113 3300049823 Ga0501044_0000125 Ga0501044_0000125_18963_20027 342
114 3300049823 Ga0501044_0053537 Ga0501044_0053537_1427_2518 342
115 3300005841 Ga0068863_100194505 Ga0068863_1001945052 343
116 3300009093 Ga0105240_10027827 Ga0105240_100278274 343
117 3300009551 Ga0105238_10004426 Ga0105238_100044264 343
118 3300014325 Ga0163163_10041136 Ga0163163_100411363 343
119 3300031239 Ga0265328_10036200 Ga0265328_100362002 343
120 3300031242 Ga0265329_10009191 Ga0265329_100091913 343
121 3300031344 Ga0265316_10056941 Ga0265316_100569412 343
122 3300031711 Ga0265314_10000174 Ga0265314_1000017455 343
123 3300044712 Ga0453684_0039552 Ga0453684_0039552_4571_5728 343
124 3300045051 Ga0451576_0048664 Ga0451576_0048664_2841_3926 343
125 3300046454 Ga0495592_0000101 Ga0495592_0000101_12606_13766 343
126 3300046514 Ga0495618_0003223 Ga0495618_0003223_1918_3078 343
127 3300046516 Ga0495628_0003986 Ga0495628_0003986_6628_7788 343
128 3300046517 Ga0495630_0000077 Ga0495630_0000077_44059_45135 343
129 3300046517 Ga0495630_0030878 Ga0495630_0030878_1208_2368 343
130 3300046535 Ga0495586_0000044 Ga0495586_0000044_41699_42775 343
131 3300046535 Ga0495586_0028332 Ga0495586_0028332_580_1740 343
132 3300046543 Ga0495645_0023124 Ga0495645_0023124_2568_3728 343
133 3300046642 Ga0495634_0013249 Ga0495634_0013249_2454_3530 343
134 3300046678 Ga0495599_0008681 Ga0495599_0008681_49_1209 343
135 3300046689 Ga0495613_0025281 Ga0495613_0025281_963_2039 343
136 3300047319 Ga0495674_0001878 Ga0495674_0001878_5866_6942 343
137 3300047321 Ga0495676_0008303 Ga0495676_0008303_4266_5342 343
138 3300003320 rootH2_10013767 rootH2_100137673 344

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00672

HAMP

HAMP domain

83

136

0.97

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

251

364

0.95

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

140

206

0.93

Feature Viewer

pLDDT pTM Quality
77.18 0.48 Low
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Predicted Structure (AlphaFold2)

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