F174142

General Info

Members Datasets Scaffolds Average Seq Length
138 98 276 409

Family's Representative Sequence

Representative Sequence 3300046512|Ga0495610_0000458|Ga0495610_0000458_39653_41020
Length 455
Sequence MFLPEGWMRQNSEAPVAFLFYSFKKNDRSKIFLSFLKYYNIMTSTLILLISLLAIAGVIIRPFGIPEYISACAGAAILLLSGLLKFSEGISGFSKGIDVYFFLTGMMMLAETARIEGMFDWLAAHAAKLAKGSSTRLFFLIYLVGTLVTIFLSNDATAVVLTPAVIAAVRASKVKNPLPYLFICAFIANAASFVLPISNPANLVIYGSHLPDLRGWLSSFLIPSIVSIIATFIVLYILQRKALRESLSTDINIPILSGGGKAAIGGIFLSAVILTVSSAWGISLGLPTFISGMVTVMIVCIGARRSPLTIAKGVSWNVLPLVAGLFIIVEAFGKTGLTRSVSELLTSYAQGNVAGAAWGSGIITAVVCNLMNNLPAGLTASSIVHSSAPPEIIRRAILIGIDLGPNLSLTGSLASILWLVALRRENLSVSGWSFLKLGAIVMTVPLLFVLASLFI

Samples

Sample ID Description Type Environment
1 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
14 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
15 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
16 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
17 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
18 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
19 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
20 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
21 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
22 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
23 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
24 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
30 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
31 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
32 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
34 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
35 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
52 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
53 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
54 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
55 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
56 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
57 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
60 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
61 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
62 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
63 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
64 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
65 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
66 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
67 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
68 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
69 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
70 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
71 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
72 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
73 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
74 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
75 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
76 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
77 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
78 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
79 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
80 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
81 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
82 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
83 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
84 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
88 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
89 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
90 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
91 2643221609 Acidovorax sp. Root217 Isolate Unclassified
92 2643221611 Acidovorax sp. Root219 Isolate Unclassified
93 2738543012 Acidovorax sp. CF301 Isolate Unclassified
94 2816332133 Acidovorax radicis 2721A Isolate Unclassified
95 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
96 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
97 3007872151 Pseudomonas sp. SWRI51 Isolate Rhizosphere
98 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.03
Metatranscriptomes 1.45
Isolates 6.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.35
Nodule 0
Rhizoplane 2.9
Rhizosphere 71.01
Stem 0
Stem Tuber 0
Unclassified 1.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495610_0000458 3300046512 Bacteria 42182
2 JGI25165J46597_1000249 3300003214 Bacteria 72693
3 Ga0055531_10014290 3300003794 Bacteria 3584
4 Ga0070658_10001373 3300005327 Bacteria 20815
5 Ga0070658_10280428 3300005327 Bacteria 1418
6 Ga0070680_100005651 3300005336 Bacteria 9477
7 Ga0070660_100002674 3300005339 Bacteria 12245
8 Ga0070660_100067829 3300005339 Bacteria 2780
9 Ga0070660_100073628 3300005339 Bacteria 2671
10 Ga0070661_100088580 3300005344 Unclassified 2291
11 Ga0070659_100000812 3300005366 Bacteria 22779
12 Ga0070659_100006143 3300005366 Bacteria 8670
13 Ga0070663_100063546 3300005455 Bacteria 2666
14 Ga0068853_100000065 3300005539 Bacteria 75046
15 Ga0070665_100016053 3300005548 Bacteria 7516
16 Ga0070665_100043658 3300005548 Bacteria 4504
17 Ga0070665_100263973 3300005548 Bacteria 1723
18 Ga0068855_100002737 3300005563 Bacteria 21714
19 Ga0068855_100004724 3300005563 Bacteria 16637
20 Ga0068855_100119193 3300005563 Bacteria 3022
21 Ga0068854_100000238 3300005578 Bacteria 37512
22 Ga0081540_1007235 3300005983 Bacteria 7956
23 Ga0081540_1051148 3300005983 Bacteria 2045
24 Ga0105251_10013757 3300009011 Bacteria 4508
25 Ga0105244_10010546 3300009036 Bacteria 5597
26 Ga0105240_10005941 3300009093 Bacteria 18084
27 Ga0105240_10006196 3300009093 Bacteria 17608
28 Ga0105240_10010203 3300009093 Bacteria 13221
29 Ga0105240_10043629 3300009093 Bacteria 5704
30 Ga0105240_10055813 3300009093 Bacteria 4945
31 Ga0105240_10056585 3300009093 Bacteria 4907
32 Ga0105248_10000319 3300009177 Bacteria 56800
33 Ga0105237_10000659 3300009545 Bacteria 47952
34 Ga0105237_10048064 3300009545 Bacteria 4289
35 Ga0105238_10124937 3300009551 Bacteria 2552
36 Ga0099796_10009932 3300010159 Bacteria 2596
37 Ga0105239_10004362 3300010375 Bacteria 16951
38 Ga0157373_10017063 3300013100 Bacteria 5287
39 Ga0157373_10032252 3300013100 Bacteria 3771
40 Ga0157373_10054564 3300013100 Bacteria 2839
41 Ga0157371_10029181 3300013102 Bacteria 3992
42 Ga0157370_10006500 3300013104 Bacteria 12876
43 Ga0157369_10027100 3300013105 Bacteria 6354
44 Ga0157374_10067057 3300013296 Bacteria 3373
45 Ga0157372_10183876 3300013307 Bacteria 2420
46 Ga0213876_10115845 3300021384 Bacteria 1422
47 Ga0213875_10000864 3300021388 Bacteria 22378
48 Ga0213875_10004662 3300021388 Bacteria 7470
49 Ga0228598_1000674 3300024227 Bacteria 7208
50 Ga0209563_104031 3300025230 Bacteria 2889
51 Ga0209759_1000793 3300025256 Bacteria 25859
52 Ga0209233_1000047 3300025261 Bacteria 459614
53 Ga0209257_1000683 3300025304 Bacteria 52794
54 Ga0207655_1000006 3300025728 Bacteria 861092
55 Ga0207655_1020391 3300025728 Bacteria 3409
56 Ga0207705_10020905 3300025909 Unclassified 4670
57 Ga0207705_10103284 3300025909 Bacteria 2099
58 Ga0207695_10008852 3300025913 Bacteria 12533
59 Ga0207695_10043952 3300025913 Bacteria 4756
60 Ga0207695_10135464 3300025913 Bacteria 2416
61 Ga0207671_10001535 3300025914 Bacteria 26478
62 Ga0207657_10005585 3300025919 Bacteria 13135
63 Ga0207657_10009586 3300025919 Bacteria 9720
64 Ga0207657_10072476 3300025919 Bacteria 2914
65 Ga0207652_10005290 3300025921 Bacteria 10471
66 Ga0207690_10001450 3300025932 Bacteria 14839
67 Ga0207711_10000225 3300025941 Bacteria 60644
68 Ga0207667_10008835 3300025949 Bacteria 11925
69 Ga0207667_10036177 3300025949 Bacteria 5293
70 Ga0207667_10081528 3300025949 Bacteria 3351
71 Ga0207640_10000323 3300025981 Bacteria 31989
72 Ga0207639_10000092 3300026041 Bacteria 75024
73 Ga0207678_10155261 3300026067 Bacteria 1954
74 Ga0209588_1014188 3300027671 Bacteria 2438
75 Ga0268266_10001081 3300028379 Bacteria 34140
76 Ga0268266_10136069 3300028379 Bacteria 2201
77 Ga0265338_10003513 3300028800 Bacteria 21957
78 Ga0265762_1000955 3300030760 Bacteria 5186
79 Ga0265760_10000078 3300031090 Bacteria 24886
80 Ga0265340_10044811 3300031247 Bacteria 2163
81 Ga0265331_10017512 3300031250 Bacteria 3733
82 Ga0307510_10049909 3300033180 Bacteria 4446
83 Ga0395898_0264421 3300037466 Bacteria 1641
84 Ga0436364_0134609 3300037853 Bacteria 7716
85 Ga0436364_0195314 3300037853 Bacteria 1411
86 Ga0436364_0292718 3300037853 Bacteria 1590
87 Ga0436364_0293754 3300037853 Bacteria 44649
88 Ga0436364_1076677 3300037853 Bacteria 7334
89 Ga0395901_0057238 3300038443 Bacteria 4055
90 Ga0436365_0273042 3300039437 Bacteria 2264
91 Ga0436365_0896814 3300039437 Bacteria 5576
92 Ga0436365_1692679 3300039437 Bacteria 1420
93 Ga0436361_0889088 3300039447 Bacteria 9170
94 Ga0439438_002322 3300041405 Bacteria 8126
95 Ga0466970_0099055 3300044765 Bacteria 1587
96 Ga0466959_0005083 3300045049 Bacteria 8944
97 Ga0495650_0003190 3300046471 Bacteria 12214
98 Ga0495607_0000533 3300046501 Bacteria 37381
99 Ga0495607_0008447 3300046501 Bacteria 7036
100 Ga0495637_0009556 3300046520 Bacteria 4728
101 Ga0495637_0051627 3300046520 Bacteria 1720
102 Ga0495671_0094007 3300046692 Bacteria 1467
103 Ga0495649_0007201 3300046694 Bacteria 6823
104 Ga0495676_0049627 3300047321 Bacteria 3372
105 Ga0495683_0000129 3300047323 Bacteria 75590
106 Ga0495679_017031 3300047446 Bacteria 2612
107 Ga0495686_0001618 3300047472 Bacteria 23642
108 Ga0496104_0003823 3300048907 Bacteria 13033
109 Ga0496105_0008783 3300048908 Bacteria 7867
110 Ga0496114_0223101 3300048917 Bacteria 1655
111 Ga0496117_0003216 3300048920 Bacteria 19303
112 Ga0496117_0004964 3300048920 Bacteria 14279
113 Ga0496118_0010970 3300048921 Bacteria 8905
114 Ga0496119_0000145 3300048922 Bacteria 99245
115 Ga0496120_0000417 3300048923 Bacteria 67929
116 Ga0496121_0037480 3300048924 Bacteria 4306
117 Ga0496123_0093907 3300048926 Bacteria 1770
118 Ga0496124_0000079 3300048927 Bacteria 212057
119 Ga0496125_0003426 3300048928 Bacteria 19227
120 Ga0496125_0021830 3300048928 Bacteria 5957
121 Ga0501033_0000162 3300049570 Bacteria 63932
122 Ga0501033_0054971 3300049570 Bacteria 2944
123 Ga0501034_0023337 3300049571 Bacteria 6305
124 Ga0501047_0186818 3300049581 Bacteria 1937
125 Ga0501073_0050678 3300049589 Bacteria 2909
126 Ga0501035_0000510 3300049822 Bacteria 43630
127 Ga0501035_0080520 3300049822 Bacteria 2875
128 Ga0501035_0152566 3300049822 Bacteria 2004
129 Ga0500635_0000017 3300053080 Bacteria 113720
130 2599332608 2599185156 Bacteria 5403036
131 2644063103 2643221609 Bacteria 6756331
132 2644075527 2643221611 Bacteria 6820941
133 2739246746 2738543012 Bacteria 7115078
134 2816475472 2816332133 Bacteria 7249298
135 2842922882 2842922631 Bacteria 5824079
136 2894821108 2894817345 Bacteria 4892941
137 3007872271 3007872151 Bacteria 5268868
138 8006993916 8006984368 Bacteria 9651211
139 Ga0495610_0000458
140 JGI25165J46597_1000249
141 Ga0055531_10014290
142 Ga0070658_10001373
143 Ga0070658_10280428
144 Ga0070680_100005651
145 Ga0070660_100002674
146 Ga0070660_100067829
147 Ga0070660_100073628
148 Ga0070661_100088580
149 Ga0070659_100000812
150 Ga0070659_100006143
151 Ga0070663_100063546
152 Ga0068853_100000065
153 Ga0070665_100016053
154 Ga0070665_100043658
155 Ga0070665_100263973
156 Ga0068855_100002737
157 Ga0068855_100004724
158 Ga0068855_100119193
159 Ga0068854_100000238
160 Ga0081540_1007235
161 Ga0081540_1051148
162 Ga0105251_10013757
163 Ga0105244_10010546
164 Ga0105240_10005941
165 Ga0105240_10006196
166 Ga0105240_10010203
167 Ga0105240_10043629
168 Ga0105240_10055813
169 Ga0105240_10056585
170 Ga0105248_10000319
171 Ga0105237_10000659
172 Ga0105237_10048064
173 Ga0105238_10124937
174 Ga0099796_10009932
175 Ga0105239_10004362
176 Ga0157373_10017063
177 Ga0157373_10032252
178 Ga0157373_10054564
179 Ga0157371_10029181
180 Ga0157370_10006500
181 Ga0157369_10027100
182 Ga0157374_10067057
183 Ga0157372_10183876
184 Ga0213876_10115845
185 Ga0213875_10000864
186 Ga0213875_10004662
187 Ga0228598_1000674
188 Ga0209563_104031
189 Ga0209759_1000793
190 Ga0209233_1000047
191 Ga0209257_1000683
192 Ga0207655_1000006
193 Ga0207655_1020391
194 Ga0207705_10020905
195 Ga0207705_10103284
196 Ga0207695_10008852
197 Ga0207695_10043952
198 Ga0207695_10135464
199 Ga0207671_10001535
200 Ga0207657_10005585
201 Ga0207657_10009586
202 Ga0207657_10072476
203 Ga0207652_10005290
204 Ga0207690_10001450
205 Ga0207711_10000225
206 Ga0207667_10008835
207 Ga0207667_10036177
208 Ga0207667_10081528
209 Ga0207640_10000323
210 Ga0207639_10000092
211 Ga0207678_10155261
212 Ga0209588_1014188
213 Ga0268266_10001081
214 Ga0268266_10136069
215 Ga0265338_10003513
216 Ga0265762_1000955
217 Ga0265760_10000078
218 Ga0265340_10044811
219 Ga0265331_10017512
220 Ga0307510_10049909
221 Ga0395898_0264421
222 Ga0436364_0134609
223 Ga0436364_0195314
224 Ga0436364_0292718
225 Ga0436364_0293754
226 Ga0436364_1076677
227 Ga0395901_0057238
228 Ga0436365_0273042
229 Ga0436365_0896814
230 Ga0436365_1692679
231 Ga0436361_0889088
232 Ga0439438_002322
233 Ga0466970_0099055
234 Ga0466959_0005083
235 Ga0495650_0003190
236 Ga0495607_0000533
237 Ga0495607_0008447
238 Ga0495637_0009556
239 Ga0495637_0051627
240 Ga0495671_0094007
241 Ga0495649_0007201
242 Ga0495676_0049627
243 Ga0495683_0000129
244 Ga0495679_017031
245 Ga0495686_0001618
246 Ga0496104_0003823
247 Ga0496105_0008783
248 Ga0496114_0223101
249 Ga0496117_0003216
250 Ga0496117_0004964
251 Ga0496118_0010970
252 Ga0496119_0000145
253 Ga0496120_0000417
254 Ga0496121_0037480
255 Ga0496123_0093907
256 Ga0496124_0000079
257 Ga0496125_0003426
258 Ga0496125_0021830
259 Ga0501033_0000162
260 Ga0501033_0054971
261 Ga0501034_0023337
262 Ga0501047_0186818
263 Ga0501073_0050678
264 Ga0501035_0000510
265 Ga0501035_0080520
266 Ga0501035_0152566
267 Ga0500635_0000017
268 2599332608
269 2644063103
270 2644075527
271 2739246746
272 2816475472
273 2842922882
274 2894821108
275 3007872271
276 8006993916

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02040

ArsB

Arsenical pump membrane protein

46

455

0.85

PF03600

CitMHS

Citrate transporter

52

422

0.85

PF00939

Na_sulph_symp

Sodium:sulfate symporter transmembrane region

33

244

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
5uld-assembly2.cif.gz_C structure and function of the divalent anion/na+ symporter from vibrio cholerae and a humanized variant 0.6763 15 395
6ol1-assembly1.cif.gz_B structure of vcindy in complex with succinate 0.6747 15 394
4f35-assembly2.cif.gz_B crystal structure of a bacterial dicarboxylate/sodium symporter 0.6563 15 394
5uld-assembly2.cif.gz_C structure and function of the divalent anion/na+ symporter from vibrio cholerae and a humanized variant 0.6546 15 395
6ol1-assembly1.cif.gz_B structure of vcindy in complex with succinate 0.6516 15 394
ID Description Score Start End Superfamily
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.8351 7 392 1.20.1530.20
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.816 7 392 1.20.1530.20
af_C0PV55_1_138_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.2839 170 285 1.20.140.150
af_Q2G0D6_9_205_1.20.58.220 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphate transport system protein phou homolog 2; domain 2 0.2737 56 285 1.20.58.220
af_Q9XUW4_25_323_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2727 65 370 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A4Q3NTP3-F1-model_v4 deleted 0.9624 129 395
AF-A0A2W5J5D5-F1-model_v4 deleted 0.9566 39 390
AF-A0A5P6PEE8-F1-model_v4 Response regulator 0.9484 5 392 GO:0000160
GO:0005886
GO:0015105
AF-A0A4Q3P048-F1-model_v4 deleted 0.9476 1 357
AF-A0A6H9THR1-F1-model_v4 Arsenic transporter 0.9475 39 394 GO:0005886
GO:0015105

Map