F176987

General Info

Members Datasets Scaffolds Average Seq Length
139 112 121 709

Family's Representative Sequence

Representative Sequence 3300036401|Ga0373937_0045645|Ga0373937_0045645_837_3050
Length 737
Sequence VVVAGEEVIHCVLFTHELVTFTQNFFMTSKRLIVFLFLLVVLKTYADDTLTLFSPNHNIQLTVYRQSDGQLKYGVYYKQKFFIKPSGLAMKLSTPDVLLSKFDIVRADQKQLDETWKPVWGEVSTIRNNYQELALQLKDRSGSGILMNIVFRAFNDGVAFRYEFPTQQKLNHFVVADEMTQFCVGADHNTFWIPGDFDSNEFQYNHTRLSGVDASNSKMTNEIFAKFFFDKNAVQTPLMMKSDDGLYINIHEAALVNYPAMDLVIDKSTFTLNSRLVPDAVGNMAYLQTPSHTPWRTIIVSDKAPDILASKMILNLNEPSKIADPSWIKPQKFVGVWWEMHIGKSSWDYSGSQVGSQQAAKVPHGANTANVKKYIDFAAKYGFDAVLVEGWNTGWEDWFGQWKENVFDFVTPYPDYDVNELTSYAQSKGVKIICHHETSASVTNYERWMDTAYRFMIDHNMNSVKTGYVGHIIPRGEHHDGQWMVNHYVRVAEKTAGYKIMVDMHEPVRPTGLQRTYPNWVACEAARGNEFNAWSVGNNPDHETILPFTRLMGGPMDYTPGLFRIKLNQFDTTKKEQIHTTLAKQLALYVTMYSPLQMAADLPENYEQHLDALQFIRDVAVDWDDTKILDAEPGDYIIEARKAKNKESWFLGAISDENARNFMEPMTFLDAGKKYVATVYRDADNADWQKNPEAYKIEKFIVDSKTKLKLKLAPGGGTAISLVPATADEIKQVKKYK

Samples

Sample ID Description Type Environment
1 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
2 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
3 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
4 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
5 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
6 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
7 2818991444 Filimonas endophytica 3197 Isolate Unclassified
8 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
9 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
10 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
11 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
12 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
13 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
14 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
15 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
16 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
17 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
18 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
19 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
20 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
21 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
22 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
25 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
26 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
27 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
28 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
29 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
30 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
31 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
32 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
33 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
34 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
43 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
61 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
62 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
65 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
81 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
82 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
83 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
84 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
85 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
92 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
93 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
94 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
95 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
96 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
97 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
98 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
99 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
100 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
101 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
102 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
103 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
104 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
105 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
106 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
107 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
108 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
109 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
110 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
111 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
112 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.05
Metatranscriptomes 0
Isolates 12.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.79
Nodule 1.44
Rhizoplane 0.72
Rhizosphere 67.63
Stem 0
Stem Tuber 0
Unclassified 19.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10009033 3300001979 Bacteria 3925
2 rootL2_10085798 3300003322 Bacteria 11878
3 rootL2_10155379 3300003322 Bacteria 4070
4 JGI25160J50197_1000969 3300003354 Bacteria 14970
5 Ga0055526_1003602 3300003771 Bacteria 9718
6 Ga0055528_1000235 3300003790 Bacteria 46469
7 Ga0055530_10000706 3300003791 Bacteria 28085
8 Ga0065165_1000019 3300005262 Bacteria 271815
9 Ga0065704_10071758 3300005289 Bacteria 10003
10 Ga0065704_10096123 3300005289 Bacteria 2456
11 Ga0065712_10004315 3300005290 Bacteria 5222
12 Ga0070670_100031880 3300005331 Bacteria 4538
13 Ga0068869_100091860 3300005334 Bacteria 2284
14 Ga0070682_100000037 3300005337 Bacteria 147526
15 Ga0070682_100024723 3300005337 Bacteria 3577
16 Ga0070689_100014060 3300005340 Bacteria 5807
17 Ga0070669_100019580 3300005353 Bacteria 4834
18 Ga0070673_100001930 3300005364 Bacteria 12471
19 Ga0070688_100001768 3300005365 Bacteria 10813
20 Ga0070659_100008229 3300005366 Bacteria 7615
21 Ga0068867_100061941 3300005459 Bacteria 2779
22 Ga0068852_100001327 3300005616 Bacteria 16562
23 Ga0068859_100001262 3300005617 Bacteria 25854
24 Ga0068870_10012696 3300005840 Bacteria 3943
25 Ga0068863_100046240 3300005841 Bacteria 4131
26 Ga0097621_100050586 3300006237 Bacteria 3379
27 Ga0075434_100019871 3300006871 Bacteria 6504
28 Ga0097620_100001262 3300006931 Bacteria 25854
29 Ga0079104_1001041 3300006946 Bacteria 21182
30 Ga0105244_10000065 3300009036 Bacteria 121781
31 Ga0111539_10005120 3300009094 Bacteria 17001
32 Ga0114129_10111282 3300009147 Bacteria 3779
33 Ga0105241_10070382 3300009174 Bacteria 2714
34 Ga0157373_10000003 3300013100 Bacteria 454601
35 Ga0157373_10007280 3300013100 Bacteria 8247
36 Ga0157371_10010289 3300013102 Bacteria 7298
37 Ga0157370_10001184 3300013104 Bacteria 32508
38 Ga0157370_10002135 3300013104 Bacteria 24145
39 Ga0157370_10006839 3300013104 Bacteria 12493
40 Ga0157370_10008230 3300013104 Bacteria 11261
41 Ga0157370_10010710 3300013104 Bacteria 9647
42 Ga0157370_10048680 3300013104 Bacteria 4060
43 Ga0157370_10079388 3300013104 Bacteria 3090
44 Ga0157369_10009386 3300013105 Bacteria 11187
45 Ga0157369_10017536 3300013105 Bacteria 8045
46 Ga0157374_10004535 3300013296 Bacteria 11663
47 Ga0163162_10003846 3300013306 Bacteria 14400
48 Ga0157375_10006789 3300013308 Bacteria 9967
49 Ga0157375_10007125 3300013308 Bacteria 9769
50 Ga0157375_10060315 3300013308 Bacteria 3762
51 Ga0157375_10184514 3300013308 Bacteria 2239
52 Ga0163163_10005015 3300014325 Bacteria 11410
53 Ga0157380_10015530 3300014326 Bacteria 5598
54 Ga0157377_10006497 3300014745 Bacteria 5581
55 Ga0182006_1001044 3300015261 Bacteria 17912
56 Ga0163161_10012989 3300017792 Bacteria 5787
57 Ga0163161_10014198 3300017792 Bacteria 5547
58 Ga0163161_10017777 3300017792 Bacteria 4982
59 Ga0213876_10000098 3300021384 Bacteria 98314
60 Ga0209646_1000004 3300025246 Bacteria 786587
61 Ga0209026_1000495 3300025250 Bacteria 28866
62 Ga0209673_1000183 3300025273 Bacteria 126175
63 Ga0209564_1001373 3300025295 Bacteria 25479
64 Ga0209758_1001739 3300025297 Bacteria 24272
65 Ga0209758_1005586 3300025297 Bacteria 9567
66 Ga0209050_1000305 3300025298 Bacteria 100790
67 Ga0207426_1000566 3300025302 Bacteria 50036
68 Ga0207426_1003546 3300025302 Bacteria 8338
69 Ga0207697_10015598 3300025315 Bacteria 3137
70 Ga0207655_1000003 3300025728 Bacteria 1081376
71 Ga0207647_10000131 3300025904 Bacteria 58960
72 Ga0207643_10021593 3300025908 Bacteria 3538
73 Ga0207650_10000767 3300025925 Bacteria 24650
74 Ga0207690_10003371 3300025932 Bacteria 9552
75 Ga0207706_10007535 3300025933 Bacteria 10072
76 Ga0207670_10016354 3300025936 Bacteria 4456
77 Ga0207691_10028057 3300025940 Bacteria 5274
78 Ga0207689_10015551 3300025942 Bacteria 6445
79 Ga0207689_10018345 3300025942 Bacteria 5904
80 Ga0207674_10008410 3300026116 Bacteria 11925
81 Ga0207675_100000153 3300026118 Bacteria 60593
82 Ga0207683_10001651 3300026121 Bacteria 19982
83 Ga0209281_1000392 3300027111 Bacteria 68425
84 Ga0307515_10000001 3300028794 Bacteria 4259510
85 Ga0307515_10000012 3300028794 Bacteria 582232
86 Ga0265327_10000632 3300031251 Bacteria 57391
87 Ga0307509_10018094 3300031507 Bacteria 8090
88 Ga0307405_10000007 3300031731 Bacteria 348101
89 Ga0307406_10004535 3300031901 Bacteria 7567
90 Ga0307414_10012018 3300032004 Bacteria 5105
91 Ga0373937_0045645 3300036401 Bacteria 4004
92 Ga0436365_1023949 3300039437 Bacteria 126686
93 Ga0451577_0000227 3300042876 Bacteria 114840
94 Ga0451577_0042883 3300042876 Bacteria 4055
95 Ga0453684_0000033 3300044712 Bacteria 734012
96 Ga0453684_0050300 3300044712 Bacteria 5485
97 Ga0451576_0071418 3300045051 Bacteria 3613
98 Ga0451576_0096951 3300045051 Bacteria 3067
99 Ga0495627_001701 3300046453 Bacteria 12053
100 Ga0495607_0032521 3300046501 Bacteria 3183
101 Ga0495606_0042307 3300046507 Bacteria 3048
102 Ga0495608_0032042 3300046511 Bacteria 3553
103 Ga0495630_0002913 3300046517 Bacteria 11891
104 Ga0495643_0001067 3300046522 Bacteria 27322
105 Ga0495587_0005508 3300046536 Bacteria 8260
106 Ga0495668_0000310 3300046616 Bacteria 67405
107 Ga0495668_0001557 3300046616 Bacteria 21755
108 Ga0495686_0036057 3300047472 Bacteria 3175
109 Ga0496115_0006025 3300048918 Bacteria 8854
110 Ga0496116_0000002 3300048919 Bacteria 920291
111 Ga0496121_0000010 3300048924 Bacteria 793488
112 Ga0496121_0056330 3300048924 Bacteria 3266
113 Ga0496124_0097229 3300048927 Bacteria 2391
114 Ga0496125_0000007 3300048928 Bacteria 715355
115 Ga0496125_0000863 3300048928 Bacteria 48582
116 Ga0496126_0097500 3300048929 Bacteria 2576
117 Ga0501257_000425 3300049686 Bacteria 8315
118 nmdc:mga05p37_17301_c1 3300050507 Bacteria 8696
119 Ga0500641_0000353 3300053096 Bacteria 17145
120 Ga0500568_0000208 3300053139 Bacteria 51266
121 Ga0500611_000001 3300053727 Bacteria 385744

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047472 Ga0495686_0036057 Ga0495686_0036057_1076_3064 615
2 3300013308 Ga0157375_10184514 Ga0157375_101845141 635
3 3300048924 Ga0496121_0000010 Ga0496121_0000010_784819_786915 645
4 3300003322 rootL2_10155379 rootL2_101553792 646
5 3300005331 Ga0070670_100031880 Ga0070670_1000318803 646
6 3300014325 Ga0163163_10005015 Ga0163163_100050158 646
7 3300025925 Ga0207650_10000767 Ga0207650_100007674 646
8 3300046616 Ga0495668_0001557 Ga0495668_0001557_3853_6018 652
9 3300046616 Ga0495668_0000310 Ga0495668_0000310_18582_20804 656
10 3300003322 rootL2_10085798 rootL2_1008579811 658
11 3300013104 Ga0157370_10006839 Ga0157370_1000683912 658
12 3300044712 Ga0453684_0050300 Ga0453684_0050300_2375_4408 659
13 3300042876 Ga0451577_0000227 Ga0451577_0000227_39170_41314 660
14 3300044712 Ga0453684_0000033 Ga0453684_0000033_493868_496012 660
15 3300048918 Ga0496115_0006025 Ga0496115_0006025_1372_3483 660
16 3300048928 Ga0496125_0000863 Ga0496125_0000863_4274_6385 660
17 3300013104 Ga0157370_10048680 Ga0157370_100486803 662
18 3300013105 Ga0157369_10017536 Ga0157369_100175366 662
19 3300045051 Ga0451576_0096951 Ga0451576_0096951_870_3008 662
20 3300045051 Ga0451576_0071418 Ga0451576_0071418_1265_3487 663
21 3300053096 Ga0500641_0000353 Ga0500641_0000353_82_2178 669
22 3300028794 Ga0307515_10000012 Ga0307515_10000012555 670
23 3300003354 JGI25160J50197_1000969 JGI25160J50197_100096911 673
24 3300003771 Ga0055526_1003602 Ga0055526_10036023 673
25 3300003790 Ga0055528_1000235 Ga0055528_100023517 673
26 3300003791 Ga0055530_10000706 Ga0055530_1000070614 673
27 3300005262 Ga0065165_1000019 Ga0065165_100001980 673
28 3300005337 Ga0070682_100000037 Ga0070682_10000003783 673
29 3300025273 Ga0209673_1000183 Ga0209673_10001838 673
30 3300025298 Ga0209050_1000305 Ga0209050_100030534 673
31 3300025302 Ga0207426_1000566 Ga0207426_100056619 673
32 3300046511 Ga0495608_0032042 Ga0495608_0032042_791_3004 673
33 iso_pu_bacteria 2958512119 2958514885 673
34 3300013308 Ga0157375_10007125 Ga0157375_100071259 674
35 iso_pu_bacteria 2818991444 2819590516 675
36 3300009147 Ga0114129_10111282 Ga0114129_101112824 676
37 3300050507 nmdc:mga05p37_17301_c1 nmdc:mga05p37_17301_c1_2929_5067 676
38 iso_pu_bacteria 2896317667 2896321286 676
39 iso_pu_bacteria 2919509842 2919511736 676
40 3300005289 Ga0065704_10071758 Ga0065704_100717589 677
41 3300013104 Ga0157370_10079388 Ga0157370_100793882 677
42 3300017792 Ga0163161_10014198 Ga0163161_100141982 677
43 3300017792 Ga0163161_10017777 Ga0163161_100177771 677
44 3300031507 Ga0307509_10018094 Ga0307509_100180946 677
45 3300031731 Ga0307405_10000007 Ga0307405_10000007160 677
46 3300031901 Ga0307406_10004535 Ga0307406_100045356 677
47 3300046507 Ga0495606_0042307 Ga0495606_0042307_676_2772 677
48 3300046522 Ga0495643_0001067 Ga0495643_0001067_9337_11433 677
49 3300005366 Ga0070659_100008229 Ga0070659_1000082294 678
50 3300005616 Ga0068852_100001327 Ga0068852_10000132712 678
51 3300013100 Ga0157373_10007280 Ga0157373_100072803 678
52 3300025904 Ga0207647_10000131 Ga0207647_1000013127 678
53 3300025932 Ga0207690_10003371 Ga0207690_100033714 678
54 3300013104 Ga0157370_10010710 Ga0157370_1001071010 679
55 3300032004 Ga0307414_10012018 Ga0307414_100120182 679
56 3300046453 Ga0495627_001701 Ga0495627_001701_4296_6413 679
57 3300053139 Ga0500568_0000208 Ga0500568_0000208_19198_21339 679
58 3300005289 Ga0065704_10096123 Ga0065704_100961232 680
59 3300046501 Ga0495607_0032521 Ga0495607_0032521_115_2286 680
60 3300005459 Ga0068867_100061941 Ga0068867_1000619411 681
61 3300005841 Ga0068863_100046240 Ga0068863_1000462403 681
62 3300006237 Ga0097621_100050586 Ga0097621_1000505862 681
63 3300006871 Ga0075434_100019871 Ga0075434_1000198714 681
64 3300013296 Ga0157374_10004535 Ga0157374_100045355 681
65 3300013306 Ga0163162_10003846 Ga0163162_100038462 681
66 3300013308 Ga0157375_10006789 Ga0157375_100067894 681
67 3300017792 Ga0163161_10012989 Ga0163161_100129895 681
68 3300025933 Ga0207706_10007535 Ga0207706_100075355 681
69 3300025940 Ga0207691_10028057 Ga0207691_100280573 681
70 3300025942 Ga0207689_10015551 Ga0207689_100155516 681
71 3300026121 Ga0207683_10001651 Ga0207683_100016518 681
72 3300036401 Ga0373937_0045645 Ga0373937_0045645_837_3050 681
73 3300046517 Ga0495630_0002913 Ga0495630_0002913_7858_10071 681
74 3300046536 Ga0495587_0005508 Ga0495587_0005508_209_2422 681
75 3300049686 Ga0501257_000425 Ga0501257_000425_4347_6506 681
76 iso_pu_bacteria 2818991444 2819587092 681
77 3300005290 Ga0065712_10004315 Ga0065712_100043154 682
78 3300005334 Ga0068869_100091860 Ga0068869_1000918601 682
79 3300005337 Ga0070682_100024723 Ga0070682_1000247232 682
80 3300005340 Ga0070689_100014060 Ga0070689_1000140603 682
81 3300005353 Ga0070669_100019580 Ga0070669_1000195803 682
82 3300005364 Ga0070673_100001930 Ga0070673_10000193014 682
83 3300005365 Ga0070688_100001768 Ga0070688_10000176812 682
84 3300005840 Ga0068870_10012696 Ga0068870_100126963 682
85 3300006946 Ga0079104_1001041 Ga0079104_10010418 682
86 3300009036 Ga0105244_10000065 Ga0105244_1000006542 682
87 3300009094 Ga0111539_10005120 Ga0111539_100051209 682
88 3300013100 Ga0157373_10000003 Ga0157373_1000000368 682
89 3300013102 Ga0157371_10010289 Ga0157371_100102895 682
90 3300013104 Ga0157370_10001184 Ga0157370_1000118420 682
91 3300013104 Ga0157370_10002135 Ga0157370_100021351 682
92 3300013104 Ga0157370_10008230 Ga0157370_100082302 682
93 3300013105 Ga0157369_10009386 Ga0157369_100093862 682
94 3300013308 Ga0157375_10060315 Ga0157375_100603152 682
95 3300014326 Ga0157380_10015530 Ga0157380_100155307 682
96 3300014745 Ga0157377_10006497 Ga0157377_100064976 682
97 3300015261 Ga0182006_1001044 Ga0182006_10010448 682
98 3300025315 Ga0207697_10015598 Ga0207697_100155982 682
99 3300025728 Ga0207655_1000003 Ga0207655_1000003398 682
100 3300025908 Ga0207643_10021593 Ga0207643_100215933 682
101 3300025936 Ga0207670_10016354 Ga0207670_100163542 682
102 3300025942 Ga0207689_10018345 Ga0207689_100183453 682
103 3300026116 Ga0207674_10008410 Ga0207674_1000841012 682
104 3300026118 Ga0207675_100000153 Ga0207675_10000015313 682
105 3300027111 Ga0209281_1000392 Ga0209281_10003928 682
106 3300048919 Ga0496116_0000002 Ga0496116_0000002_697076_699256 682
107 3300048924 Ga0496121_0056330 Ga0496121_0056330_83_2263 682
108 3300048928 Ga0496125_0000007 Ga0496125_0000007_695235_697415 682
109 3300048929 Ga0496126_0097500 Ga0496126_0097500_368_2548 682
110 3300053727 Ga0500611_000001 Ga0500611_000001_159150_161342 682
111 iso_pu_bacteria 2643221600 2644011976 682
112 iso_pu_bacteria 2643221716 2644641259 682
113 iso_pu_bacteria 2643221725 2644682609 682
114 iso_pu_bacteria 2739367857 2740000216 682
115 iso_pu_bacteria 2739367858 2740005032 682
116 iso_pu_bacteria 2802428842 2802651387 682
117 iso_pu_bacteria 2839989709 2839992607 682
118 iso_pu_bacteria 2881359912 2881361561 682
119 iso_pu_bacteria 2904419702 2904420237 682
120 iso_pu_bacteria 2904555929 2904557896 682
121 iso_pu_bacteria 2919191525 2919192544 682
122 iso_pu_bacteria 2977268062 2977268126 682
123 iso_pu_bacteria 8055419101 8055419967 682
124 3300042876 Ga0451577_0042883 Ga0451577_0042883_230_2383 683
125 3300021384 Ga0213876_10000098 Ga0213876_100000984 684
126 3300039437 Ga0436365_1023949 Ga0436365_1023949_122311_124476 684
127 3300048927 Ga0496124_0097229 Ga0496124_0097229_184_2298 684
128 3300009174 Ga0105241_10070382 Ga0105241_100703822 685
129 3300005617 Ga0068859_100001262 Ga0068859_10000126213 686
130 3300006931 Ga0097620_100001262 Ga0097620_10000126213 686
131 3300025246 Ga0209646_1000004 Ga0209646_100000444 686
132 3300025250 Ga0209026_1000495 Ga0209026_100049514 686
133 3300028794 Ga0307515_10000001 Ga0307515_10000001164 686
134 3300031251 Ga0265327_10000632 Ga0265327_1000063262 686
135 3300001979 JGI24740J21852_10009033 JGI24740J21852_100090332 687
136 3300025295 Ga0209564_1001373 Ga0209564_100137313 687
137 3300025297 Ga0209758_1001739 Ga0209758_100173915 687
138 3300025297 Ga0209758_1005586 Ga0209758_10055866 687
139 3300025302 Ga0207426_1003546 Ga0207426_10035468 687

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10566

Glyco_hydro_97

Glycoside hydrolase 97

324

620

0.98

PF14509

GH97_C

Glycosyl-hydrolase 97 C-terminal, oligomerisation

622

723

0.98

PF14508

GH97_N

Glycosyl-hydrolase 97 N-terminal

52

319

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2jkp-assembly2.cif.gz_B structure of a family 97 alpha-glucosidase from bacteroides thetaiotaomicron in complex with castanospermine 0.9464 48 687
2d73-assembly1.cif.gz_A crystal structure analysis of susb 0.946 52 687
2zq0-assembly1.cif.gz_B crystal structure of susb complexed with acarbose 0.9446 27 687
2zq0-assembly1.cif.gz_A crystal structure of susb complexed with acarbose 0.9443 27 687
3wfa-assembly1.cif.gz_A catalytic role of the calcium ion in gh97 inverting glycoside hydrolase 0.9421 27 687
ID Description Score Start End Superfamily
5e1qB03 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9796 585 685 2.60.40.1180
5e1qB03 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9696 585 685 2.60.40.1180
2d73B03 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9689 587 687 2.60.40.1180
2jkeA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9399 277 687 3.20.20.70
2jkeA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9225 277 687 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A2T2UZ19-F1-model_v4 Alpha-glucosidase 0.996 575 687
AF-A0A6L3JUW8-F1-model_v4 deleted 0.9938 593 687
AF-A0A357L352-F1-model_v4 Alpha-glucosidase 0.993 543 687
AF-A0A4Q6G216-F1-model_v4 Glycoside hydrolase family 97 protein 0.991 581 687 GO:0016787
AF-A0A0P8ACC9-F1-model_v4 Family 97 glycoside hydrolase 0.991 614 687 GO:0016787

Feature Viewer

pLDDT pTM Quality
83.64 0.87 High
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Predicted Structure (AlphaFold2)

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