F177646

General Info

Members Datasets Scaffolds Average Seq Length
139 111 139 292

Family's Representative Sequence

Representative Sequence 3300049578|Ga0501042_0008011|Ga0501042_0008011_2392_3441
Length 349
Sequence MKYVRFVSKRGTVPVFPARERDRAHVAHKQDAIVTIPATEGPGHGRRCSISCTWETSNPLSRHHPRITGPSPTSRLLLACPDRPGLIAAVSGFLADAGLNIVDADQHSSDEGRFFMRMVFDAVPADELDAVRQRFEREVASRYEMEHRFSESSERKRVAIMVSREDHCLSDLLWRWRSGELGADLVAVVSNHEDHRGQVEALGLDFHHVPVTPDTRERAEERALEMFEGVDLLVLARYMQVLSGNFLTRLSAPAINIHHSFLPAFVGADPYRRAHERGVKLIGATAHYVTEELDAGPIIDQDVTRVSHRDEVEDLKRIGRDIERLVLARAVKAHVDDRVLLDGARTIVF

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
18 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
25 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
37 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
66 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
67 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
68 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
69 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
70 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
71 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
72 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
73 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
74 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
75 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
76 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
77 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
78 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
79 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
80 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
83 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
84 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
85 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
86 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
87 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
88 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
89 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
90 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
91 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
92 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
93 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
94 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
95 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
96 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
99 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
100 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
101 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
102 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
106 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
107 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
108 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
109 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
110 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
111 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.44
Nodule 0
Rhizoplane 8.63
Rhizosphere 88.49
Stem 0
Stem Tuber 0
Unclassified 1.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10010336 3300002459 Bacteria 1923
2 Ga0070677_10000304 3300005333 Bacteria 17193
3 Ga0070682_100000013 3300005337 Bacteria 254641
4 Ga0070682_100123322 3300005337 Bacteria 1743
5 Ga0068868_100000932 3300005338 Bacteria 19897
6 Ga0070668_100052664 3300005347 Bacteria 3137
7 Ga0070674_100000029 3300005356 Bacteria 69489
8 Ga0070673_100006705 3300005364 Bacteria 7508
9 Ga0070667_100014901 3300005367 Bacteria 6423
10 Ga0070714_100333301 3300005435 Bacteria 1421
11 Ga0070700_100084878 3300005441 Bacteria 2053
12 Ga0070662_100000016 3300005457 Bacteria 105820
13 Ga0070681_10008161 3300005458 Bacteria 10250
14 Ga0070679_100000388 3300005530 Bacteria 37491
15 Ga0068853_100007219 3300005539 Bacteria 8900
16 Ga0070665_100000244 3300005548 Bacteria 90284
17 Ga0070665_100241740 3300005548 Bacteria 1806
18 Ga0070665_100252148 3300005548 Bacteria 1766
19 Ga0068852_100080026 3300005616 Bacteria 2896
20 Ga0068866_10000001 3300005718 Bacteria 519680
21 Ga0068870_10033495 3300005840 Bacteria 2622
22 Ga0068858_100000590 3300005842 Bacteria 37996
23 Ga0068858_100279073 3300005842 Bacteria 1591
24 Ga0068860_100018165 3300005843 Bacteria 6846
25 Ga0068860_100091797 3300005843 Bacteria 2893
26 Ga0068862_100000574 3300005844 Bacteria 38284
27 Ga0081455_10016825 3300005937 Bacteria 7033
28 Ga0081539_10001929 3300005985 Bacteria 31957
29 Ga0070715_10000001 3300006163 Bacteria 693690
30 Ga0070716_100102900 3300006173 Bacteria 1755
31 Ga0075430_100078718 3300006846 Bacteria 2763
32 Ga0105240_10591246 3300009093 Bacteria 1223
33 Ga0105242_10000194 3300009176 Bacteria 47231
34 Ga0105249_10004476 3300009553 Bacteria 12081
35 Ga0105246_10245286 3300011119 Bacteria 1418
36 Ga0157374_10003347 3300013296 Bacteria 13463
37 Ga0157374_10137007 3300013296 Bacteria 2374
38 Ga0163162_10542132 3300013306 Bacteria 1292
39 Ga0157375_10008548 3300013308 Bacteria 8964
40 Ga0163163_10523689 3300014325 Bacteria 1248
41 Ga0157379_10004714 3300014968 Bacteria 11711
42 Ga0157379_10182803 3300014968 Bacteria 1894
43 Ga0163161_10065742 3300017792 Bacteria 2646
44 Ga0207682_10000557 3300025893 Bacteria 17207
45 Ga0207642_10000031 3300025899 Bacteria 45198
46 Ga0207685_10000036 3300025905 Bacteria 65666
47 Ga0207707_10173516 3300025912 Bacteria 1884
48 Ga0207660_10032883 3300025917 Bacteria 3583
49 Ga0207652_10000349 3300025921 Bacteria 47896
50 Ga0207681_10093649 3300025923 Bacteria 2151
51 Ga0207664_10194410 3300025929 Bacteria 1748
52 Ga0207690_10011232 3300025932 Bacteria 5349
53 Ga0207706_10000068 3300025933 Bacteria 105795
54 Ga0207686_10000033 3300025934 Bacteria 143602
55 Ga0207669_10000012 3300025937 Bacteria 138242
56 Ga0207665_10050857 3300025939 Bacteria 2788
57 Ga0207661_10005700 3300025944 Bacteria 8786
58 Ga0207651_10002191 3300025960 Bacteria 9243
59 Ga0207712_10069161 3300025961 Bacteria 2532
60 Ga0207712_10119327 3300025961 Bacteria 1992
61 Ga0207658_10000769 3300025986 Bacteria 27425
62 Ga0207677_10000654 3300026023 Bacteria 20750
63 Ga0207703_10000020 3300026035 Bacteria 251603
64 Ga0207703_10208898 3300026035 Bacteria 1739
65 Ga0207639_10000915 3300026041 Bacteria 19983
66 Ga0207702_10008989 3300026078 Bacteria 8414
67 Ga0207641_10146166 3300026088 Bacteria 2138
68 Ga0207648_10000848 3300026089 Bacteria 34516
69 Ga0207683_10088946 3300026121 Bacteria 2748
70 Ga0207698_10064097 3300026142 Bacteria 2879
71 Ga0268266_10000020 3300028379 Bacteria 527065
72 Ga0268266_10040416 3300028379 Bacteria 3975
73 Ga0268266_10089529 3300028379 Bacteria 2695
74 Ga0268265_10001801 3300028380 Bacteria 17161
75 Ga0268264_10034452 3300028381 Bacteria 4165
76 Ga0268264_10088767 3300028381 Bacteria 2661
77 Ga0265337_1000259 3300028556 Bacteria 28578
78 Ga0373937_0109304 3300036401 Bacteria 2571
79 Ga0436365_1235641 3300039437 Bacteria 1908
80 Ga0451853_3359397 3300041512 Bacteria 3551
81 Ga0466963_0000001 3300044694 Bacteria 110556
82 Ga0466967_0614530 3300045976 Bacteria 1073
83 Ga0495592_0000036 3300046454 Bacteria 125461
84 Ga0495603_0000480 3300046455 Bacteria 22066
85 Ga0495629_0000801 3300046459 Bacteria 25450
86 Ga0495629_0011608 3300046459 Bacteria 6396
87 Ga0495629_0305771 3300046459 Bacteria 1088
88 Ga0495638_0038910 3300046460 Bacteria 3021
89 Ga0495651_0144211 3300046462 Bacteria 1723
90 Ga0495582_0000112 3300046473 Bacteria 42740
91 Ga0495662_0000083 3300046476 Bacteria 34253
92 Ga0495608_0003552 3300046511 Bacteria 11167
93 Ga0495608_0171908 3300046511 Bacteria 1374
94 Ga0495628_0000144 3300046516 Bacteria 61254
95 Ga0495628_0019241 3300046516 Bacteria 5647
96 Ga0495630_0000251 3300046517 Bacteria 43193
97 Ga0495652_0000019 3300046529 Bacteria 190248
98 Ga0495587_0005656 3300046536 Bacteria 8148
99 Ga0495645_0007734 3300046543 Bacteria 7477
100 Ga0495645_0030972 3300046543 Bacteria 3897
101 Ga0495622_0000180 3300046557 Bacteria 51095
102 Ga0495634_0027366 3300046642 Bacteria 3967
103 Ga0495634_0049049 3300046642 Bacteria 2840
104 Ga0495635_0000016 3300046663 Bacteria 214088
105 Ga0495635_0003097 3300046663 Bacteria 11440
106 Ga0495657_0010297 3300046675 Bacteria 7042
107 Ga0495657_0012766 3300046675 Bacteria 6229
108 Ga0495658_0000005 3300046683 Bacteria 149839
109 Ga0495613_0000577 3300046689 Bacteria 29814
110 Ga0495674_0000251 3300047319 Bacteria 45351
111 Ga0495676_0001697 3300047321 Bacteria 19216
112 Ga0495676_0006414 3300047321 Bacteria 10839
113 Ga0495680_0000647 3300047322 Bacteria 39030
114 Ga0495675_0060833 3300047444 Bacteria 2393
115 Ga0495686_0078462 3300047472 Bacteria 2021
116 Ga0495602_0002001 3300048088 Bacteria 20483
117 Ga0495614_0078777 3300048089 Bacteria 1426
118 Ga0496102_0093741 3300048905 Bacteria 2782
119 Ga0496103_0000008 3300048906 Bacteria 340474
120 Ga0496110_0006845 3300048913 Bacteria 9059
121 Ga0496111_0003117 3300048914 Bacteria 10198
122 Ga0496111_0034954 3300048914 Bacteria 3590
123 Ga0496111_0274472 3300048914 Bacteria 1251
124 Ga0496112_0000003 3300048915 Bacteria 660147
125 Ga0496113_0008267 3300048916 Bacteria 6768
126 Ga0496114_0043659 3300048917 Bacteria 3717
127 Ga0496115_0000003 3300048918 Bacteria 354994
128 Ga0496115_0000828 3300048918 Bacteria 22654
129 Ga0496115_0002008 3300048918 Bacteria 14544
130 Ga0501042_0008011 3300049578 Bacteria 6953
131 Ga0495601_0002042 3300053077 Bacteria 11329
132 Ga0495601_0003677 3300053077 Bacteria 8820
133 Ga0495655_0000001 3300053083 Bacteria 419518
134 Ga0495595_0000087 3300053084 Bacteria 43931
135 Ga0495619_0000021 3300053085 Bacteria 187095
136 Ga0495619_0001021 3300053085 Bacteria 18351
137 Ga0495619_0021281 3300053085 Bacteria 4137
138 Ga0500566_0005977 3300053094 Bacteria 7237
139 Ga0500628_000065 3300053129 Bacteria 28526

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053085 Ga0495619_0000021 Ga0495619_0000021_147183_147887 233
2 3300044694 Ga0466963_0000001 Ga0466963_0000001_105164_106108 265
3 3300005937 Ga0081455_10016825 Ga0081455_100168252 271
4 3300005337 Ga0070682_100123322 Ga0070682_1001233222 274
5 3300039437 Ga0436365_1235641 Ga0436365_1235641_263_1147 280
6 3300005435 Ga0070714_100333301 Ga0070714_1003333012 281
7 3300005548 Ga0070665_100000244 Ga0070665_10000024420 281
8 3300005842 Ga0068858_100000590 Ga0068858_10000059020 281
9 3300025929 Ga0207664_10194410 Ga0207664_101944102 281
10 3300025932 Ga0207690_10011232 Ga0207690_100112325 281
11 3300026035 Ga0207703_10000020 Ga0207703_1000002015 281
12 3300028379 Ga0268266_10000020 Ga0268266_1000002020 281
13 3300046516 Ga0495628_0000144 Ga0495628_0000144_32918_33763 281
14 3300048088 Ga0495602_0002001 Ga0495602_0002001_10954_11799 281
15 3300053077 Ga0495601_0003677 Ga0495601_0003677_4038_4883 281
16 3300005333 Ga0070677_10000304 Ga0070677_1000030412 282
17 3300005337 Ga0070682_100000013 Ga0070682_100000013144 282
18 3300005347 Ga0070668_100052664 Ga0070668_1000526642 282
19 3300005356 Ga0070674_100000029 Ga0070674_10000002970 282
20 3300005364 Ga0070673_100006705 Ga0070673_1000067058 282
21 3300005367 Ga0070667_100014901 Ga0070667_1000149013 282
22 3300005441 Ga0070700_100084878 Ga0070700_1000848782 282
23 3300005458 Ga0070681_10008161 Ga0070681_100081615 282
24 3300005530 Ga0070679_100000388 Ga0070679_10000038838 282
25 3300005539 Ga0068853_100007219 Ga0068853_1000072195 282
26 3300005548 Ga0070665_100241740 Ga0070665_1002417402 282
27 3300005548 Ga0070665_100252148 Ga0070665_1002521482 282
28 3300005718 Ga0068866_10000001 Ga0068866_10000001254 282
29 3300005842 Ga0068858_100279073 Ga0068858_1002790731 282
30 3300005843 Ga0068860_100018165 Ga0068860_1000181652 282
31 3300005843 Ga0068860_100091797 Ga0068860_1000917973 282
32 3300005844 Ga0068862_100000574 Ga0068862_10000057419 282
33 3300005985 Ga0081539_10001929 Ga0081539_1000192927 282
34 3300006163 Ga0070715_10000001 Ga0070715_10000001226 282
35 3300006846 Ga0075430_100078718 Ga0075430_1000787183 282
36 3300009093 Ga0105240_10591246 Ga0105240_105912461 282
37 3300009176 Ga0105242_10000194 Ga0105242_1000019415 282
38 3300009553 Ga0105249_10004476 Ga0105249_1000447613 282
39 3300011119 Ga0105246_10245286 Ga0105246_102452861 282
40 3300013296 Ga0157374_10003347 Ga0157374_100033475 282
41 3300013296 Ga0157374_10137007 Ga0157374_101370072 282
42 3300013306 Ga0163162_10542132 Ga0163162_105421321 282
43 3300013308 Ga0157375_10008548 Ga0157375_100085486 282
44 3300014325 Ga0163163_10523689 Ga0163163_105236891 282
45 3300014968 Ga0157379_10004714 Ga0157379_1000471414 282
46 3300014968 Ga0157379_10182803 Ga0157379_101828032 282
47 3300017792 Ga0163161_10065742 Ga0163161_100657423 282
48 3300025893 Ga0207682_10000557 Ga0207682_100005577 282
49 3300025899 Ga0207642_10000031 Ga0207642_1000003121 282
50 3300025905 Ga0207685_10000036 Ga0207685_1000003613 282
51 3300025912 Ga0207707_10173516 Ga0207707_101735162 282
52 3300025917 Ga0207660_10032883 Ga0207660_100328832 282
53 3300025921 Ga0207652_10000349 Ga0207652_1000034948 282
54 3300025923 Ga0207681_10093649 Ga0207681_100936492 282
55 3300025934 Ga0207686_10000033 Ga0207686_10000033104 282
56 3300025937 Ga0207669_10000012 Ga0207669_1000001272 282
57 3300025944 Ga0207661_10005700 Ga0207661_100057003 282
58 3300025960 Ga0207651_10002191 Ga0207651_100021914 282
59 3300025961 Ga0207712_10069161 Ga0207712_100691612 282
60 3300025961 Ga0207712_10119327 Ga0207712_101193272 282
61 3300025986 Ga0207658_10000769 Ga0207658_100007698 282
62 3300026035 Ga0207703_10208898 Ga0207703_102088982 282
63 3300026041 Ga0207639_10000915 Ga0207639_1000091515 282
64 3300026078 Ga0207702_10008989 Ga0207702_100089893 282
65 3300026088 Ga0207641_10146166 Ga0207641_101461662 282
66 3300026089 Ga0207648_10000848 Ga0207648_1000084827 282
67 3300026121 Ga0207683_10088946 Ga0207683_100889462 282
68 3300028379 Ga0268266_10040416 Ga0268266_100404162 282
69 3300028379 Ga0268266_10089529 Ga0268266_100895294 282
70 3300028380 Ga0268265_10001801 Ga0268265_100018012 282
71 3300028381 Ga0268264_10034452 Ga0268264_100344523 282
72 3300028381 Ga0268264_10088767 Ga0268264_100887672 282
73 3300036401 Ga0373937_0109304 Ga0373937_0109304_476_1489 282
74 3300041512 Ga0451853_3359397 Ga0451853_3359397_2045_2965 282
75 3300045976 Ga0466967_0614530 Ga0466967_0614530_129_977 282
76 3300046455 Ga0495603_0000480 Ga0495603_0000480_18665_19612 282
77 3300046459 Ga0495629_0000801 Ga0495629_0000801_6698_7564 282
78 3300046459 Ga0495629_0011608 Ga0495629_0011608_1840_2736 282
79 3300046459 Ga0495629_0305771 Ga0495629_0305771_36_926 282
80 3300046460 Ga0495638_0038910 Ga0495638_0038910_1317_2165 282
81 3300046462 Ga0495651_0144211 Ga0495651_0144211_144_992 282
82 3300046473 Ga0495582_0000112 Ga0495582_0000112_33550_34398 282
83 3300046511 Ga0495608_0171908 Ga0495608_0171908_119_967 282
84 3300046516 Ga0495628_0019241 Ga0495628_0019241_2405_3253 282
85 3300046517 Ga0495630_0000251 Ga0495630_0000251_15653_16531 282
86 3300046529 Ga0495652_0000019 Ga0495652_0000019_79574_80422 282
87 3300046536 Ga0495587_0005656 Ga0495587_0005656_4762_5640 282
88 3300046543 Ga0495645_0007734 Ga0495645_0007734_5940_6788 282
89 3300046543 Ga0495645_0030972 Ga0495645_0030972_2438_3358 282
90 3300046557 Ga0495622_0000180 Ga0495622_0000180_8968_9816 282
91 3300046663 Ga0495635_0003097 Ga0495635_0003097_7144_8157 282
92 3300046675 Ga0495657_0012766 Ga0495657_0012766_4354_5232 282
93 3300046683 Ga0495658_0000005 Ga0495658_0000005_146615_147463 282
94 3300047319 Ga0495674_0000251 Ga0495674_0000251_15524_16372 282
95 3300047321 Ga0495676_0001697 Ga0495676_0001697_18253_19134 282
96 3300047321 Ga0495676_0006414 Ga0495676_0006414_6063_6929 282
97 3300047444 Ga0495675_0060833 Ga0495675_0060833_410_1270 282
98 3300047472 Ga0495686_0078462 Ga0495686_0078462_895_1743 282
99 3300048089 Ga0495614_0078777 Ga0495614_0078777_224_1075 282
100 3300048906 Ga0496103_0000008 Ga0496103_0000008_303828_304712 282
101 3300048914 Ga0496111_0034954 Ga0496111_0034954_1864_2802 282
102 3300048917 Ga0496114_0043659 Ga0496114_0043659_990_1856 282
103 3300048918 Ga0496115_0000003 Ga0496115_0000003_270252_271118 282
104 3300048918 Ga0496115_0000828 Ga0496115_0000828_12855_13721 282
105 3300053077 Ga0495601_0002042 Ga0495601_0002042_9103_9981 282
106 3300053083 Ga0495655_0000001 Ga0495655_0000001_107872_108750 282
107 3300053085 Ga0495619_0001021 Ga0495619_0001021_14759_15772 282
108 3300053085 Ga0495619_0021281 Ga0495619_0021281_2617_3495 282
109 3300053094 Ga0500566_0005977 Ga0500566_0005977_248_1144 282
110 3300053129 Ga0500628_000065 Ga0500628_000065_10573_11451 282
111 3300002459 JGI24751J29686_10010336 JGI24751J29686_100103362 283
112 3300005338 Ga0068868_100000932 Ga0068868_10000093218 283
113 3300005457 Ga0070662_100000016 Ga0070662_10000001691 283
114 3300005616 Ga0068852_100080026 Ga0068852_1000800262 283
115 3300005840 Ga0068870_10033495 Ga0068870_100334952 283
116 3300006173 Ga0070716_100102900 Ga0070716_1001029002 283
117 3300025933 Ga0207706_10000068 Ga0207706_1000006892 283
118 3300025939 Ga0207665_10050857 Ga0207665_100508574 283
119 3300026023 Ga0207677_10000654 Ga0207677_1000065416 283
120 3300026142 Ga0207698_10064097 Ga0207698_100640972 283
121 3300028556 Ga0265337_1000259 Ga0265337_10002598 283
122 3300046454 Ga0495592_0000036 Ga0495592_0000036_83750_84691 283
123 3300046476 Ga0495662_0000083 Ga0495662_0000083_10324_11241 283
124 3300046511 Ga0495608_0003552 Ga0495608_0003552_9906_10811 283
125 3300046642 Ga0495634_0027366 Ga0495634_0027366_2556_3470 283
126 3300046642 Ga0495634_0049049 Ga0495634_0049049_886_1845 283
127 3300046663 Ga0495635_0000016 Ga0495635_0000016_83390_84295 283
128 3300046675 Ga0495657_0010297 Ga0495657_0010297_2786_3673 283
129 3300046689 Ga0495613_0000577 Ga0495613_0000577_25515_26402 283
130 3300047322 Ga0495680_0000647 Ga0495680_0000647_36230_37114 283
131 3300048905 Ga0496102_0093741 Ga0496102_0093741_230_1147 283
132 3300048913 Ga0496110_0006845 Ga0496110_0006845_2199_3227 283
133 3300048914 Ga0496111_0003117 Ga0496111_0003117_7076_8104 283
134 3300048914 Ga0496111_0274472 Ga0496111_0274472_74_1210 283
135 3300048915 Ga0496112_0000003 Ga0496112_0000003_100526_101443 283
136 3300048916 Ga0496113_0008267 Ga0496113_0008267_3465_4361 283
137 3300048918 Ga0496115_0002008 Ga0496115_0002008_10182_11036 283
138 3300049578 Ga0501042_0008011 Ga0501042_0008011_2392_3441 283
139 3300053084 Ga0495595_0000087 Ga0495595_0000087_21099_21989 283

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00551

Formyl_trans_N

Formyl transferase

156

331

0.9

PF01842

ACT

ACT domain

74

139

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3w7b-assembly1.cif.gz_A crystal structure of formyltetrahydrofolate deformylase from thermus thermophilus hb8 0.9237 6 283
3w7b-assembly1.cif.gz_A crystal structure of formyltetrahydrofolate deformylase from thermus thermophilus hb8 0.905 6 283
3lou-assembly1.cif.gz_A crystal structure of formyltetrahydrofolate deformylase (yp_105254.1) from burkholderia mallei atcc 23344 at 1.90 a resolution 0.8977 5 283
3lou-assembly1.cif.gz_B crystal structure of formyltetrahydrofolate deformylase (yp_105254.1) from burkholderia mallei atcc 23344 at 1.90 a resolution 0.8954 7 283
3n0v-assembly1.cif.gz_D crystal structure of a formyltetrahydrofolate deformylase (pp_0327) from pseudomonas putida kt2440 at 2.25 a resolution 0.8941 7 283
ID Description Score Start End Superfamily
3w7bA01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9618 6 89 3.30.70.260
af_A0A1D6F177_170_222_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9198 9 55 3.30.70.260
3w7bA01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9087 6 89 3.30.70.260
3nrbA01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.8999 6 89 3.30.70.260
af_Q58953_1_90_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.889 6 85 3.30.70.260
ID Description Score Start End GO Terms
AF-A0A5D0I9B8-F1-model_v4 ACT domain-containing protein 0.9405 6 192 GO:0006189
GO:0006730
GO:0008864
AF-A0A2V9L4K5-F1-model_v4 Formyltetrahydrofolate deformylase 0.9313 5 173 GO:0006189
GO:0006730
GO:0008864
AF-A0A3C1W838-F1-model_v4 ACT domain-containing protein 0.9313 5 146 GO:0006189
GO:0008864
AF-A0A521TD26-F1-model_v4 Formyltetrahydrofolate deformylase 0.9278 6 85 GO:0006189
GO:0008864
AF-A0A7X8Y2C9-F1-model_v4 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.9265 6 192 GO:0006189
GO:0006730
GO:0008864

Feature Viewer

pLDDT pTM Quality
90.72 0.87 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map