F179985

General Info

Members Datasets Scaffolds Average Seq Length
140 95 140 769

Family's Representative Sequence

Representative Sequence 3300031249|Ga0265339_10018437|Ga0265339_100184372
Length 836
Sequence MRGFLAPGRSTLNLWGVPSPARLIVFAGSLCALLTVGHRALGQDDDVDQLVGPPPPVTRPEGKPVAFDEAWLEPYFTKGPAKDGVDAVRAEDWPNAERAFNKAIKVLRKGSDEQSAARYMLALARENQSEWNDAGPVFEGLYKSYPKLAPYHAYHAARCRLRRGDAAGALEWADRVPAGSVPEAETALVRIDALRAMNRWNDALAALGTYLERYPNGPRRAEAQFKQGEALEKTGTPFAQAPDDVIPDVSAIYRRVWAEAPLEAWSDRAGDRLDALAATLPAPEAKLVRTHTAGEWVARGMSYFNANRNTESEQAFASALAAPGLDRDLECKARFHRAQSVWKQRNRPRAAPLFDEADGACFRAGNRDLHAKALYQGARCYASMGDKAGALARYGRVEAEHADHSYADDARIREAELATDAGDDKTAVAILAEIPKRYPKGDLLNEALWRLAFTAWRAGNDAEALHWLDENLRLVPHEDIWYAEGRALYWKARVLERTGKPADARTFYERAVREYPLSVYALLALQRIGAADADAEKALVASLRGGMRDEPKWTFAPRPLFGDAAFLRAVELARMGQGGDARRELARLGLATSAEKHTGVRGGPEDEDLLWITAILLDRGGSWAASHSIPRYGLTRYRLDYPQAIGEAKWKIAYPRAFPALVAKNAKANDLPEGLQLAIMREESAFSPRTESFANAIGLTQMIIKTAKRFANGATVTRDVLLDPAKNVEIGSRFLGFLWKHFNAVPPLTIAGYNAGEAAVERWLGERGNLAMDEFMETIPYDETRNYTKRVLASYFAYSWLYGDAPVPKVPLAQARPGGSKAEKRTLTTATATAAQ

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
45 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
46 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
47 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
48 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
49 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
50 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
51 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
52 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
53 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
54 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
55 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
56 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
57 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
58 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
59 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
60 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
61 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
62 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
63 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
64 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
65 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
66 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
67 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
68 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
69 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
70 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
71 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
72 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
73 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
74 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
79 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
80 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
81 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
82 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
83 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
84 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
85 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
86 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
87 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
88 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
89 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
90 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
91 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
92 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
93 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
94 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
95 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.57
Nodule 0
Rhizoplane 2.14
Rhizosphere 89.29
Stem 0
Stem Tuber 0
Unclassified 5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10045702 3300003323 Bacteria 6330
2 Ga0070658_10047462 3300005327 Bacteria 3476
3 Ga0070690_100001456 3300005330 Bacteria 12366
4 Ga0070690_100010067 3300005330 Bacteria 5489
5 Ga0070680_100016602 3300005336 Bacteria 5794
6 Ga0070689_100000002 3300005340 Bacteria 695141
7 Ga0070689_100002157 3300005340 Bacteria 12757
8 Ga0070668_100042939 3300005347 Bacteria 3465
9 Ga0070669_100008987 3300005353 Bacteria 7129
10 Ga0070674_100002664 3300005356 Bacteria 9893
11 Ga0070673_100000274 3300005364 Bacteria 26538
12 Ga0070673_100006190 3300005364 Bacteria 7759
13 Ga0070681_10054419 3300005458 Bacteria 3987
14 Ga0070679_100002328 3300005530 Bacteria 17175
15 Ga0070679_100010440 3300005530 Bacteria 8809
16 Ga0070679_100015061 3300005530 Bacteria 7430
17 Ga0070679_100043441 3300005530 Bacteria 4477
18 Ga0070684_100001774 3300005535 Bacteria 15747
19 Ga0070684_100039193 3300005535 Bacteria 4074
20 Ga0068853_100005470 3300005539 Bacteria 9952
21 Ga0070686_100003431 3300005544 Bacteria 8700
22 Ga0070686_100023318 3300005544 Bacteria 3698
23 Ga0068855_100002160 3300005563 Bacteria 24307
24 Ga0068852_100010687 3300005616 Bacteria 6873
25 Ga0068859_100006867 3300005617 Bacteria 11558
26 Ga0068861_100031462 3300005719 Bacteria 3899
27 Ga0070717_10004647 3300006028 Bacteria 9956
28 Ga0097621_100078845 3300006237 Bacteria 2737
29 Ga0075431_100023854 3300006847 Bacteria 6262
30 Ga0075429_100012828 3300006880 Bacteria 7270
31 Ga0097620_100006867 3300006931 Bacteria 11558
32 Ga0105240_10003230 3300009093 Bacteria 25522
33 Ga0111539_10049152 3300009094 Bacteria 5033
34 Ga0105245_10000260 3300009098 Bacteria 50205
35 Ga0105237_10000447 3300009545 Bacteria 58649
36 Ga0105249_10008726 3300009553 Bacteria 8841
37 Ga0157372_10076063 3300013307 Bacteria 3790
38 Ga0207705_10037334 3300025909 Bacteria 3476
39 Ga0207707_10031230 3300025912 Bacteria 4660
40 Ga0207707_10048424 3300025912 Bacteria 3702
41 Ga0207695_10002913 3300025913 Bacteria 24748
42 Ga0207671_10002390 3300025914 Bacteria 20152
43 Ga0207652_10019540 3300025921 Bacteria 5573
44 Ga0207652_10062170 3300025921 Bacteria 3226
45 Ga0207687_10000182 3300025927 Bacteria 41661
46 Ga0207670_10000001 3300025936 Bacteria 949312
47 Ga0207670_10001393 3300025936 Bacteria 12703
48 Ga0207670_10034241 3300025936 Bacteria 3280
49 Ga0207669_10001418 3300025937 Bacteria 10209
50 Ga0207691_10034538 3300025940 Bacteria 4701
51 Ga0207661_10008792 3300025944 Bacteria 7226
52 Ga0207661_10044588 3300025944 Bacteria 3506
53 Ga0207651_10000991 3300025960 Bacteria 12551
54 Ga0207639_10039496 3300026041 Bacteria 3517
55 Ga0207648_10008183 3300026089 Bacteria 10165
56 Ga0207675_100001691 3300026118 Bacteria 22078
57 Ga0207675_100026366 3300026118 Bacteria 5410
58 Ga0207428_10017542 3300027907 Bacteria 6139
59 Ga0265318_10000039 3300028577 Bacteria 135854
60 Ga0265318_10000064 3300028577 Bacteria 103060
61 Ga0265336_10003572 3300028666 Bacteria 6073
62 Ga0307515_10000772 3300028794 Bacteria 73794
63 Ga0265338_10002258 3300028800 Bacteria 29350
64 Ga0265330_10000074 3300031235 Bacteria 85757
65 Ga0265332_10000086 3300031238 Bacteria 81718
66 Ga0265332_10000210 3300031238 Bacteria 47356
67 Ga0265328_10000184 3300031239 Bacteria 29116
68 Ga0265328_10000856 3300031239 Bacteria 14125
69 Ga0265320_10000063 3300031240 Bacteria 99134
70 Ga0265320_10002349 3300031240 Bacteria 13252
71 Ga0265320_10014080 3300031240 Bacteria 4573
72 Ga0265325_10014956 3300031241 Bacteria 4375
73 Ga0265329_10000462 3300031242 Bacteria 21238
74 Ga0265329_10008112 3300031242 Bacteria 4008
75 Ga0265339_10006135 3300031249 Bacteria 7924
76 Ga0265339_10018437 3300031249 Bacteria 4114
77 Ga0265331_10000127 3300031250 Bacteria 99280
78 Ga0265331_10000743 3300031250 Bacteria 27437
79 Ga0265316_10003492 3300031344 Bacteria 15865
80 Ga0265316_10005707 3300031344 Bacteria 12029
81 Ga0307513_10004414 3300031456 Bacteria 18781
82 Ga0307509_10000438 3300031507 Bacteria 69898
83 Ga0307509_10005157 3300031507 Bacteria 18344
84 Ga0307509_10029668 3300031507 Bacteria 6066
85 Ga0265313_10000036 3300031595 Bacteria 124141
86 Ga0265313_10008623 3300031595 Bacteria 6745
87 Ga0265313_10014251 3300031595 Bacteria 4710
88 Ga0307508_10015440 3300031616 Bacteria 6956
89 Ga0265314_10000167 3300031711 Bacteria 99227
90 Ga0265314_10023122 3300031711 Bacteria 4748
91 Ga0265342_10000756 3300031712 Bacteria 33071
92 Ga0265342_10001673 3300031712 Bacteria 20362
93 Ga0265342_10003861 3300031712 Bacteria 12058
94 Ga0373950_0000002 3300034818 Bacteria 933559
95 Ga0373950_0000008 3300034818 Bacteria 390102
96 Ga0373949_0000019 3300035090 Bacteria 58927
97 Ga0373957_0006722 3300035120 Bacteria 3639
98 Ga0373933_0000178 3300035724 Bacteria 41903
99 Ga0373937_0002178 3300036401 Bacteria 16401
100 Ga0373937_0085300 3300036401 Bacteria 2922
101 Ga0466969_0002718 3300044656 Bacteria 9454
102 Ga0466959_0006386 3300045049 Bacteria 8161
103 Ga0495628_0070430 3300046516 Bacteria 2727
104 Ga0496101_0030079 3300048904 Bacteria 3804
105 Ga0496114_0000103 3300048917 Bacteria 61061
106 Ga0496114_0002265 3300048917 Bacteria 14648
107 Ga0501034_0000048 3300049571 Bacteria 216615
108 Ga0501043_0000984 3300049579 Bacteria 25114
109 Ga0501046_0000335 3300049580 Bacteria 47390
110 Ga0501047_0000013 3300049581 Bacteria 364111
111 Ga0501067_0000004 3300049583 Bacteria 140058
112 Ga0501068_0024580 3300049584 Bacteria 3539
113 Ga0501070_0000101 3300049586 Bacteria 74887
114 Ga0501070_0002765 3300049586 Bacteria 15313
115 Ga0501070_0027250 3300049586 Bacteria 4793
116 Ga0501072_0000011 3300049588 Bacteria 190693
117 Ga0501073_0000081 3300049589 Bacteria 60191
118 Ga0501073_0001169 3300049589 Bacteria 19168
119 Ga0501073_0011215 3300049589 Bacteria 6554
120 Ga0501073_0027973 3300049589 Bacteria 4028
121 Ga0501073_0029060 3300049589 Bacteria 3950
122 Ga0501073_0055079 3300049589 Bacteria 2783
123 Ga0501074_0000219 3300049590 Bacteria 31556
124 Ga0501079_0004226 3300049741 Bacteria 10651
125 Ga0501080_0000699 3300049742 Bacteria 26963
126 Ga0501083_0003588 3300049744 Bacteria 10883
127 Ga0501083_0020629 3300049744 Bacteria 4583
128 Ga0501083_0053869 3300049744 Bacteria 2700
129 nmdc:mga09592_53017_c1 3300050508 Bacteria 3424
130 nmdc:mga06r32_79717_c1 3300050510 Bacteria 3185
131 nmdc:mga08y16_4042_c1 3300050511 Bacteria 15304
132 Ga0500566_0003075 3300053094 Bacteria 9970
133 Ga0500566_0027317 3300053094 Bacteria 3341
134 Ga0500640_011519 3300053095 Bacteria 3605
135 Ga0500595_004570 3300053119 Bacteria 6177
136 Ga0500614_001701 3300053123 Bacteria 5141
137 Ga0501084_0000007 3300054114 Bacteria 215126
138 Ga0501082_0001468 3300060353 Bacteria 20735
139 Ga0501082_0071645 3300060353 Bacteria 2984
140 Ga0501082_0095054 3300060353 Bacteria 2575

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035090 Ga0373949_0000019 Ga0373949_0000019_36374_38629 607
2 3300005530 Ga0070679_100010440 Ga0070679_1000104408 622
3 3300025912 Ga0207707_10031230 Ga0207707_100312303 622
4 3300025921 Ga0207652_10062170 Ga0207652_100621702 622
5 3300049586 Ga0501070_0027250 Ga0501070_0027250_2333_4726 624
6 3300053095 Ga0500640_011519 Ga0500640_011519_688_3096 627
7 3300053119 Ga0500595_004570 Ga0500595_004570_3052_5460 627
8 3300006028 Ga0070717_10004647 Ga0070717_100046477 631
9 3300005535 Ga0070684_100039193 Ga0070684_1000391932 638
10 3300013307 Ga0157372_10076063 Ga0157372_100760632 638
11 3300025944 Ga0207661_10044588 Ga0207661_100445881 639
12 3300005617 Ga0068859_100006867 Ga0068859_10000686713 645
13 3300006931 Ga0097620_100006867 Ga0097620_1000068672 645
14 3300031616 Ga0307508_10015440 Ga0307508_100154408 646
15 3300005364 Ga0070673_100006190 Ga0070673_1000061906 650
16 3300025940 Ga0207691_10034538 Ga0207691_100345382 650
17 3300031507 Ga0307509_10000438 Ga0307509_1000043822 652
18 3300053094 Ga0500566_0003075 Ga0500566_0003075_1897_4374 657
19 3300028794 Ga0307515_10000772 Ga0307515_1000077237 658
20 3300053094 Ga0500566_0027317 Ga0500566_0027317_681_3125 658
21 3300046516 Ga0495628_0070430 Ga0495628_0070430_305_2653 659
22 3300005539 Ga0068853_100005470 Ga0068853_1000054702 660
23 3300053123 Ga0500614_001701 Ga0500614_001701_316_2787 660
24 3300005530 Ga0070679_100002328 Ga0070679_1000023288 661
25 3300025912 Ga0207707_10048424 Ga0207707_100484243 661
26 3300005544 Ga0070686_100023318 Ga0070686_1000233182 662
27 3300009553 Ga0105249_10008726 Ga0105249_1000872612 662
28 3300049589 Ga0501073_0055079 Ga0501073_0055079_111_2570 662
29 3300049744 Ga0501083_0053869 Ga0501083_0053869_52_2511 662
30 3300060353 Ga0501082_0095054 Ga0501082_0095054_104_2563 662
31 3300049586 Ga0501070_0000101 Ga0501070_0000101_71800_74277 663
32 3300049589 Ga0501073_0029060 Ga0501073_0029060_204_2681 663
33 3300049744 Ga0501083_0020629 Ga0501083_0020629_1628_4105 663
34 3300060353 Ga0501082_0071645 Ga0501082_0071645_174_2651 663
35 3300009094 Ga0111539_10049152 Ga0111539_100491521 664
36 3300027907 Ga0207428_10017542 Ga0207428_100175421 664
37 3300031507 Ga0307509_10029668 Ga0307509_100296687 664
38 3300035120 Ga0373957_0006722 Ga0373957_0006722_109_2574 664
39 3300050511 nmdc:mga08y16_4042_c1 nmdc:mga08y16_4042_c1_12387_14888 664
40 3300005563 Ga0068855_100002160 Ga0068855_10000216024 667
41 3300026041 Ga0207639_10039496 Ga0207639_100394961 669
42 3300005327 Ga0070658_10047462 Ga0070658_100474623 670
43 3300025909 Ga0207705_10037334 Ga0207705_100373341 670
44 3300005340 Ga0070689_100002157 Ga0070689_1000021578 671
45 3300005719 Ga0068861_100031462 Ga0068861_1000314622 671
46 3300025936 Ga0207670_10001393 Ga0207670_100013938 671
47 3300026118 Ga0207675_100026366 Ga0207675_1000263664 671
48 3300005336 Ga0070680_100016602 Ga0070680_1000166027 672
49 3300005458 Ga0070681_10054419 Ga0070681_100544193 672
50 3300034818 Ga0373950_0000002 Ga0373950_0000002_584030_586450 674
51 3300049583 Ga0501067_0000004 Ga0501067_0000004_92304_94724 674
52 3300049589 Ga0501073_0000081 Ga0501073_0000081_10085_12505 674
53 3300005340 Ga0070689_100000002 Ga0070689_100000002532 676
54 3300009098 Ga0105245_10000260 Ga0105245_1000026010 676
55 3300025927 Ga0207687_10000182 Ga0207687_1000018220 676
56 3300025936 Ga0207670_10000001 Ga0207670_10000001740 676
57 3300050508 nmdc:mga09592_53017_c1 nmdc:mga09592_53017_c1_699_3161 677
58 3300050510 nmdc:mga06r32_79717_c1 nmdc:mga06r32_79717_c1_178_2640 677
59 3300028577 Ga0265318_10000039 Ga0265318_100000394 678
60 3300031238 Ga0265332_10000210 Ga0265332_1000021016 678
61 3300031239 Ga0265328_10000856 Ga0265328_1000085612 678
62 3300031240 Ga0265320_10002349 Ga0265320_100023498 678
63 3300031242 Ga0265329_10000462 Ga0265329_100004628 678
64 3300031250 Ga0265331_10000743 Ga0265331_1000074320 678
65 3300031344 Ga0265316_10003492 Ga0265316_1000349214 678
66 3300031456 Ga0307513_10004414 Ga0307513_1000441413 678
67 3300031595 Ga0265313_10014251 Ga0265313_100142511 678
68 3300031712 Ga0265342_10000756 Ga0265342_1000075625 678
69 3300031241 Ga0265325_10014956 Ga0265325_100149564 679
70 3300006847 Ga0075431_100023854 Ga0075431_1000238545 680
71 3300006880 Ga0075429_100012828 Ga0075429_1000128282 680
72 3300031507 Ga0307509_10005157 Ga0307509_100051571 680
73 3300005530 Ga0070679_100015061 Ga0070679_1000150616 681
74 3300025921 Ga0207652_10019540 Ga0207652_100195403 681
75 3300028577 Ga0265318_10000064 Ga0265318_1000006451 683
76 3300031235 Ga0265330_10000074 Ga0265330_1000007431 683
77 3300031238 Ga0265332_10000086 Ga0265332_1000008635 683
78 3300031240 Ga0265320_10000063 Ga0265320_1000006348 683
79 3300031242 Ga0265329_10008112 Ga0265329_100081122 683
80 3300031250 Ga0265331_10000127 Ga0265331_1000012748 683
81 3300031344 Ga0265316_10005707 Ga0265316_100057072 683
82 3300031595 Ga0265313_10000036 Ga0265313_1000003643 683
83 3300031711 Ga0265314_10000167 Ga0265314_1000016748 683
84 3300049589 Ga0501073_0001169 Ga0501073_0001169_11432_13900 683
85 3300044656 Ga0466969_0002718 Ga0466969_0002718_6055_9036 684
86 3300048917 Ga0496114_0002265 Ga0496114_0002265_5945_8464 685
87 3300006237 Ga0097621_100078845 Ga0097621_1000788452 687
88 3300045049 Ga0466959_0006386 Ga0466959_0006386_5004_7985 687
89 3300005616 Ga0068852_100010687 Ga0068852_1000106875 688
90 3300031239 Ga0265328_10000184 Ga0265328_100001848 689
91 3300031240 Ga0265320_10014080 Ga0265320_100140803 689
92 3300031712 Ga0265342_10001673 Ga0265342_1000167314 689
93 3300025914 Ga0207671_10002390 Ga0207671_100023908 693
94 3300031595 Ga0265313_10008623 Ga0265313_100086232 693
95 3300009545 Ga0105237_10000447 Ga0105237_100004472 695
96 3300028800 Ga0265338_10002258 Ga0265338_1000225825 697
97 3300031249 Ga0265339_10006135 Ga0265339_100061353 697
98 3300035724 Ga0373933_0000178 Ga0373933_0000178_20271_22733 701
99 3300005330 Ga0070690_100001456 Ga0070690_1000014562 703
100 3300005364 Ga0070673_100000274 Ga0070673_10000027411 703
101 3300025936 Ga0207670_10034241 Ga0207670_100342412 703
102 3300025960 Ga0207651_10000991 Ga0207651_100009919 703
103 3300005535 Ga0070684_100001774 Ga0070684_10000177417 704
104 3300025944 Ga0207661_10008792 Ga0207661_100087925 704
105 3300005330 Ga0070690_100010067 Ga0070690_1000100675 708
106 3300005347 Ga0070668_100042939 Ga0070668_1000429392 708
107 3300005353 Ga0070669_100008987 Ga0070669_1000089873 708
108 3300005356 Ga0070674_100002664 Ga0070674_1000026645 708
109 3300005544 Ga0070686_100003431 Ga0070686_1000034312 708
110 3300025937 Ga0207669_10001418 Ga0207669_100014185 708
111 3300026089 Ga0207648_10008183 Ga0207648_100081839 708
112 3300026118 Ga0207675_100001691 Ga0207675_1000016918 708
113 3300034818 Ga0373950_0000008 Ga0373950_0000008_92648_95095 708
114 3300005530 Ga0070679_100043441 Ga0070679_1000434413 710
115 3300009093 Ga0105240_10003230 Ga0105240_100032303 710
116 3300025913 Ga0207695_10002913 Ga0207695_1000291312 710
117 3300036401 Ga0373937_0002178 Ga0373937_0002178_10232_12814 711
118 3300028666 Ga0265336_10003572 Ga0265336_100035725 712
119 3300031712 Ga0265342_10003861 Ga0265342_1000386112 712
120 3300049589 Ga0501073_0027973 Ga0501073_0027973_1417_3900 714
121 3300049571 Ga0501034_0000048 Ga0501034_0000048_116403_118859 718
122 3300049579 Ga0501043_0000984 Ga0501043_0000984_14473_16929 718
123 3300049580 Ga0501046_0000335 Ga0501046_0000335_13116_15572 718
124 3300049581 Ga0501047_0000013 Ga0501047_0000013_264123_266579 718
125 3300049584 Ga0501068_0024580 Ga0501068_0024580_678_3134 718
126 3300049586 Ga0501070_0002765 Ga0501070_0002765_2426_4882 718
127 3300049588 Ga0501072_0000011 Ga0501072_0000011_156447_158903 718
128 3300049589 Ga0501073_0011215 Ga0501073_0011215_2298_4754 718
129 3300049590 Ga0501074_0000219 Ga0501074_0000219_18725_21181 718
130 3300049741 Ga0501079_0004226 Ga0501079_0004226_634_3090 718
131 3300049742 Ga0501080_0000699 Ga0501080_0000699_20640_23096 718
132 3300049744 Ga0501083_0003588 Ga0501083_0003588_634_3090 718
133 3300054114 Ga0501084_0000007 Ga0501084_0000007_172408_174864 718
134 3300060353 Ga0501082_0001468 Ga0501082_0001468_10718_13174 718
135 3300036401 Ga0373937_0085300 Ga0373937_0085300_384_2882 721
136 3300048904 Ga0496101_0030079 Ga0496101_0030079_554_3034 721
137 3300048917 Ga0496114_0000103 Ga0496114_0000103_8129_10609 721
138 3300031249 Ga0265339_10018437 Ga0265339_100184372 725
139 3300031711 Ga0265314_10023122 Ga0265314_100231223 725
140 3300003323 rootH1_10045702 rootH1_100457022 737

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01464

SLT

Transglycosylase SLT domain

660

776

0.96

PF13174

TPR_6

Tetratricopeptide repeat

486

518

0.96

PF13432

TPR_16

Tetratricopeptide repeat

119

184

0.95

PF13432

TPR_16

Tetratricopeptide repeat

83

149

0.95

PF13428

TPR_14

Tetratricopeptide repeat

485

528

0.94

PF13432

TPR_16

Tetratricopeptide repeat

188

239

0.94

PF13174

TPR_6

Tetratricopeptide repeat

372

404

0.92

PF09976

TPR_21

Tetratricopeptide repeat-like domain

363

530

0.88

PF13432

TPR_16

Tetratricopeptide repeat

455

519

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3kd7-assembly1.cif.gz_A designed tpr module (ctpr390) in complex with its peptide-ligand (hsp90 peptide) 0.9034 256 364
8fwd-assembly1.cif.gz_2 fast and versatile sequence- independent protein docking for nanomaterials design using rpxdock 0.8941 258 362
8fwd-assembly1.cif.gz_L fast and versatile sequence- independent protein docking for nanomaterials design using rpxdock 0.8923 258 362
8fwd-assembly1.cif.gz_P fast and versatile sequence- independent protein docking for nanomaterials design using rpxdock 0.8904 258 362
8fwd-assembly1.cif.gz_0 fast and versatile sequence- independent protein docking for nanomaterials design using rpxdock 0.8867 258 362
ID Description Score Start End Superfamily
3kd7A00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9034 256 364 1.25.40.10
af_O95801_68_156_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8964 258 325 1.25.40.10
af_Q5ABB8_88_213_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8963 256 370 1.25.40.10
af_O94826_105_217_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8852 258 362 1.25.40.10
af_A0A1D6FMK6_1205_1282_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8823 258 325 1.25.40.10
ID Description Score Start End GO Terms
AF-Q0V8F4-F1-model_v4 G protein signaling modulator 1 (G-protein signalling modulator 1 (AGS3-like, C. elegans)) 0.8999 256 358 GO:0005737
AF-A0A510HLX5-F1-model_v4 Transglycosylase SLT domain protein 0.8526 555 710
AF-F8II40-F1-model_v4 Lytic transglycosylase catalytic 0.819 555 720
AF-A0A4V2B3F6-F1-model_v4 deleted 0.8096 573 718
AF-A0A510HLX5-F1-model_v4 Transglycosylase SLT domain protein 0.7818 555 710

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pLDDT pTM Quality
82 0.77 High
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Predicted Structure (AlphaFold2)

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