F180743

General Info

Members Datasets Scaffolds Average Seq Length
140 89 136 787

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0005641|Ga0501033_0005641_1387_3942
Length 844
Sequence VSWRVAVIFSGTALDTSHCFSITPKAARCFGLTLARVPSLSAMYFSPRANPTSSFLSAASRPLAAILGLLAGAAGMSAAEKPVNHPPVAPAPGKAGSNPAAEMIENYCIDCHDASSHKGDVTLEGLDPMHPAADADVWERVIRKLSHRQMPPIDQDRPDEAAYNRVIAQLQSSLDGAAESAPDPGRTDTFRRLNRTEYQNAIRDLLAVDIDAAALLPNDESSHGFDNVTVGNLSPTLLDRYITAAQKVSRLALGTARRSPGGDTIRIRPDLTQEQHVEGLPIGTRGGTLIPYEFPEDGLYEIQVRLTRDRNEAVEGLTKANDVEMLVDRERVALLTVAPPTDGKGYDGVDNNLKIRVPVKAGPHEIGVTFLKGASDLLETQRQPFIAHFNLHRHPRLTPAVYQVSITGPYSATGPGDTPSRRLLFGSLTTAPVGAAAEEKEAHAILAKVMRRAYRRPVTEEDLRKPMEFFRDNRVEGDFDTGLEAALTAVLVSPQFLFRVEADPAGVKPGQAYQISDLELASRLSFFLWSSIPDDELLTVAERGELSRPDVLEHQVRRMLADERSRSLSTNFAGQWLYLRNLDSFSPDLRLFPDFDDNLRQAMRQETELFFESVQREDRSVLDLLRSNYTYLNERLAKHYGIPNVYGSRFRRVTLDPSSHRGGLLRQGSILTVTSYATRTAPTIRGKWIMENLMGTNVPTLKDNVISASLPMRARLAEHRVNPACASCHDMIDPAGFALENFDAIGRWRDAEDGQVIDATGGLPDGSKCSGVAGLEDGLLAHPDIFATTMTEKLLTFALGRGVEFSDAPTIRQIVHEAKAQNYRFSSLILGLVNSTPFKMRKSS

Samples

Sample ID Description Type Environment
1 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
2 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
3 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
4 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
37 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
47 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
48 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
49 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
50 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
51 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
52 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
53 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
54 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
55 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
56 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
57 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
58 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
59 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
60 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
61 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
62 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
63 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
64 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
65 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
66 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
67 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
68 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
69 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
70 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
75 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
76 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
77 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
79 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
80 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
81 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
82 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
83 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
84 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
85 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
86 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
87 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
88 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
89 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.14
Metatranscriptomes 0
Isolates 2.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.43
Nodule 0
Rhizoplane 2.14
Rhizosphere 95
Stem 0
Stem Tuber 0
Unclassified 1.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10000832 3300005293 Bacteria 14328
2 Ga0070690_100002023 3300005330 Bacteria 10806
3 Ga0070670_100015734 3300005331 Bacteria 6494
4 Ga0068869_100012679 3300005334 Bacteria 5575
5 Ga0070694_100048903 3300005444 Bacteria 2846
6 Ga0070698_100125327 3300005471 Bacteria 2526
7 Ga0070699_100058043 3300005518 Bacteria 3352
8 Ga0068853_100026720 3300005539 Bacteria 4849
9 Ga0068857_100013579 3300005577 Bacteria 7094
10 Ga0068859_100015715 3300005617 Bacteria 7607
11 Ga0068859_100080220 3300005617 Bacteria 3304
12 Ga0068861_100047128 3300005719 Unclassified 3252
13 Ga0068863_100010498 3300005841 Bacteria 9001
14 Ga0097621_100007757 3300006237 Bacteria 7694
15 Ga0075428_100000021 3300006844 Bacteria 133628
16 Ga0075428_100001255 3300006844 Bacteria 27133
17 Ga0075428_100002083 3300006844 Bacteria 21581
18 Ga0075428_100003939 3300006844 Bacteria 16287
19 Ga0075428_100036869 3300006844 Bacteria 5384
20 Ga0075428_100048573 3300006844 Bacteria 4657
21 Ga0075430_100000239 3300006846 Bacteria 38069
22 Ga0075430_100014186 3300006846 Bacteria 6792
23 Ga0075431_100014940 3300006847 Bacteria 7861
24 Ga0075431_100019196 3300006847 Bacteria 6968
25 Ga0075431_100027023 3300006847 Bacteria 5887
26 Ga0075431_100113540 3300006847 Bacteria 2796
27 Ga0075434_100003740 3300006871 Bacteria 13599
28 Ga0075434_100004710 3300006871 Bacteria 12329
29 Ga0075436_100000027 3300006914 Bacteria 97947
30 Ga0075436_100041546 3300006914 Bacteria 3173
31 Ga0097620_100015716 3300006931 Bacteria 7607
32 Ga0097620_100080222 3300006931 Bacteria 3304
33 Ga0075435_100000003 3300007076 Bacteria 124953
34 Ga0075435_100000834 3300007076 Bacteria 19236
35 Ga0075435_100002286 3300007076 Bacteria 12651
36 Ga0105240_10049871 3300009093 Bacteria 5280
37 Ga0105240_10136054 3300009093 Bacteria 2943
38 Ga0111539_10000001 3300009094 Bacteria 1035431
39 Ga0111539_10000002 3300009094 Bacteria 983359
40 Ga0111539_10000015 3300009094 Bacteria 296576
41 Ga0111539_10000465 3300009094 Bacteria 50988
42 Ga0111539_10009835 3300009094 Bacteria 12067
43 Ga0114129_10000558 3300009147 Bacteria 45754
44 Ga0114129_10001521 3300009147 Bacteria 31392
45 Ga0114129_10001623 3300009147 Bacteria 30495
46 Ga0114129_10005367 3300009147 Bacteria 18091
47 Ga0114129_10018866 3300009147 Bacteria 9825
48 Ga0114129_10022371 3300009147 Bacteria 8975
49 Ga0114129_10036757 3300009147 Bacteria 6915
50 Ga0105242_10002796 3300009176 Bacteria 13666
51 Ga0105242_10024878 3300009176 Bacteria 4732
52 Ga0105242_10044820 3300009176 Bacteria 3583
53 Ga0105248_10064570 3300009177 Bacteria 4110
54 Ga0105239_10029425 3300010375 Bacteria 6039
55 Ga0157371_10025903 3300013102 Bacteria 4267
56 Ga0157369_10048420 3300013105 Bacteria 4613
57 Ga0157372_10067833 3300013307 Bacteria 4009
58 Ga0157375_10000037 3300013308 Bacteria 176523
59 Ga0163163_10000096 3300014325 Bacteria 93313
60 Ga0163163_10017285 3300014325 Bacteria 6724
61 Ga0157380_10009848 3300014326 Bacteria 6861
62 Ga0207705_10001698 3300025909 Bacteria 17517
63 Ga0207646_10043714 3300025922 Bacteria 4022
64 Ga0207650_10006439 3300025925 Bacteria 8001
65 Ga0207686_10027605 3300025934 Bacteria 3326
66 Ga0207691_10063108 3300025940 Bacteria 3361
67 Ga0207689_10035683 3300025942 Bacteria 4130
68 Ga0207651_10018822 3300025960 Unclassified 4121
69 Ga0207641_10005021 3300026088 Bacteria 11343
70 Ga0207674_10023715 3300026116 Bacteria 6567
71 Ga0207428_10000002 3300027907 Bacteria 854851
72 Ga0207428_10000026 3300027907 Bacteria 255539
73 Ga0207428_10000048 3300027907 Bacteria 180760
74 Ga0207428_10017084 3300027907 Bacteria 6234
75 Ga0307408_100000559 3300031548 Bacteria 32129
76 Ga0373959_0001040 3300034820 Bacteria 4561
77 Ga0373928_0001486 3300035084 Bacteria 4562
78 Ga0373929_0001844 3300035085 Bacteria 3970
79 Ga0373949_0003202 3300035090 Bacteria 3967
80 Ga0373951_0001473 3300035091 Bacteria 6146
81 Ga0373932_0002313 3300035112 Bacteria 4843
82 Ga0373939_0000529 3300035114 Bacteria 9592
83 Ga0373942_0000407 3300035207 Bacteria 11965
84 Ga0373961_0000874 3300035241 Bacteria 10149
85 Ga0373962_0000227 3300035242 Bacteria 11822
86 Ga0451576_0125601 3300045051 Bacteria 2673
87 Ga0451576_0134225 3300045051 Bacteria 2581
88 Ga0495638_0011232 3300046460 Bacteria 6180
89 Ga0495638_0046424 3300046460 Bacteria 2728
90 Ga0495641_0014817 3300046461 Bacteria 4201
91 Ga0495628_0042549 3300046516 Bacteria 3623
92 Ga0495586_0001899 3300046535 Bacteria 11372
93 Ga0495645_0017673 3300046543 Bacteria 5112
94 Ga0495658_0016279 3300046683 Bacteria 3827
95 Ga0495613_0003155 3300046689 Bacteria 12347
96 Ga0495674_0082032 3300047319 Bacteria 2765
97 Ga0496107_0038820 3300048910 Bacteria 3415
98 Ga0496112_0017465 3300048915 Bacteria 6741
99 Ga0496115_0031274 3300048918 Bacteria 4193
100 Ga0501033_0005641 3300049570 Bacteria 9888
101 Ga0501036_0065376 3300049572 Bacteria 3079
102 Ga0501046_0026381 3300049580 Bacteria 4746
103 Ga0501047_0008964 3300049581 Bacteria 9445
104 Ga0501047_0023445 3300049581 Bacteria 5924
105 Ga0501072_0030040 3300049588 Bacteria 4248
106 Ga0501075_0040907 3300049591 Bacteria 3473
107 Ga0501216_000941 3300049660 Bacteria 3709
108 Ga0501035_0067095 3300049822 Bacteria 3184
109 Ga0501044_0111443 3300049823 Bacteria 2744
110 nmdc:mga05p37_1148_c1 3300050507 Bacteria 30482
111 nmdc:mga05p37_12550_c1 3300050507 Bacteria 10115
112 nmdc:mga05p37_128618_c1 3300050507 Bacteria 3109
113 nmdc:mga05p37_13759_c1 3300050507 Bacteria 9694
114 nmdc:mga05p37_142602_c1 3300050507 Bacteria 2934
115 nmdc:mga05p37_25416_c1 3300050507 Bacteria 7202
116 nmdc:mga05p37_3661_c1 3300050507 Bacteria 17968
117 nmdc:mga0qj67_13551_c1 3300050509 Bacteria 6150
118 nmdc:mga0qj67_1986_c1 3300050509 Bacteria 14571
119 nmdc:mga06r32_17361_c1 3300050510 Bacteria 6569
120 nmdc:mga06r32_38540_c1 3300050510 Bacteria 4529
121 nmdc:mga08y16_156_c1 3300050511 Bacteria 59323
122 nmdc:mga08y16_2_c1 3300050511 Bacteria 983367
123 nmdc:mga08y16_3_c1 3300050511 Bacteria 936907
124 nmdc:mga08y16_55739_c1 3300050511 Bacteria 4130
125 nmdc:mga08y16_8_c1 3300050511 Bacteria 571177
126 nmdc:mga0n895_14687_c1 3300050512 Bacteria 7122
127 nmdc:mga0n895_40_c1 3300050512 Bacteria 75471
128 nmdc:mga0n895_66857_c1 3300050512 Bacteria 3559
129 nmdc:mga0rr50_330_c1 3300050513 Bacteria 25823
130 nmdc:mga0rr50_70005_c1 3300050513 Bacteria 2672
131 nmdc:mga0rr50_7_c1 3300050513 Bacteria 297175
132 nmdc:mga08x19_60_c1 3300050514 Bacteria 116399
133 Ga0500641_0001169 3300053096 Bacteria 9357
134 Ga0500568_0005616 3300053139 Bacteria 6460
135 Ga0501084_0025778 3300054114 Bacteria 4903
136 Ga0501082_0073595 3300060353 Bacteria 2943

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045051 Ga0451576_0134225 Ga0451576_0134225_39_2051 661
2 3300050507 nmdc:mga05p37_142602_c1 nmdc:mga05p37_142602_c1_771_2903 701
3 3300035242 Ga0373962_0000227 Ga0373962_0000227_7428_9596 713
4 3300025942 Ga0207689_10035683 Ga0207689_100356832 722
5 3300010375 Ga0105239_10029425 Ga0105239_100294251 725
6 3300009177 Ga0105248_10064570 Ga0105248_100645703 727
7 3300009176 Ga0105242_10044820 Ga0105242_100448202 730
8 3300006847 Ga0075431_100014940 Ga0075431_1000149407 732
9 3300050510 nmdc:mga06r32_38540_c1 nmdc:mga06r32_38540_c1_541_2778 735
10 3300009093 Ga0105240_10049871 Ga0105240_100498712 739
11 3300009093 Ga0105240_10136054 Ga0105240_101360542 739
12 3300050513 nmdc:mga0rr50_70005_c1 nmdc:mga0rr50_70005_c1_108_2354 742
13 3300006847 Ga0075431_100027023 Ga0075431_1000270234 743
14 3300046543 Ga0495645_0017673 Ga0495645_0017673_670_2922 743
15 3300050509 nmdc:mga0qj67_13551_c1 nmdc:mga0qj67_13551_c1_1289_3604 743
16 3300048910 Ga0496107_0038820 Ga0496107_0038820_657_2972 751
17 3300047319 Ga0495674_0082032 Ga0495674_0082032_50_2347 753
18 3300053096 Ga0500641_0001169 Ga0500641_0001169_5570_7948 753
19 3300006844 Ga0075428_100000021 Ga0075428_10000002113 756
20 3300027907 Ga0207428_10000026 Ga0207428_1000002699 756
21 3300045051 Ga0451576_0125601 Ga0451576_0125601_79_2436 757
22 3300006844 Ga0075428_100036869 Ga0075428_1000368693 758
23 3300006847 Ga0075431_100019196 Ga0075431_1000191962 759
24 3300050510 nmdc:mga06r32_17361_c1 nmdc:mga06r32_17361_c1_2924_5224 759
25 3300009094 Ga0111539_10000002 Ga0111539_10000002752 760
26 3300009094 Ga0111539_10009835 Ga0111539_100098354 760
27 3300027907 Ga0207428_10017084 Ga0207428_100170845 760
28 3300050511 nmdc:mga08y16_2_c1 nmdc:mga08y16_2_c1_111629_114094 760
29 3300013105 Ga0157369_10048420 Ga0157369_100484201 762
30 3300025940 Ga0207691_10063108 Ga0207691_100631082 762
31 3300048918 Ga0496115_0031274 Ga0496115_0031274_636_2948 762
32 3300009176 Ga0105242_10002796 Ga0105242_100027967 765
33 3300009176 Ga0105242_10024878 Ga0105242_100248782 765
34 3300006844 Ga0075428_100048573 Ga0075428_1000485733 767
35 iso_pu_bacteria 2687453341 2688394881 767
36 3300005577 Ga0068857_100013579 Ga0068857_1000135793 768
37 3300025934 Ga0207686_10027605 Ga0207686_100276052 768
38 3300026116 Ga0207674_10023715 Ga0207674_100237153 768
39 3300046461 Ga0495641_0014817 Ga0495641_0014817_614_3004 768
40 3300046516 Ga0495628_0042549 Ga0495628_0042549_951_3299 768
41 3300046535 Ga0495586_0001899 Ga0495586_0001899_8081_10471 768
42 3300046683 Ga0495658_0016279 Ga0495658_0016279_1053_3443 768
43 3300046689 Ga0495613_0003155 Ga0495613_0003155_1051_3441 768
44 3300009147 Ga0114129_10036757 Ga0114129_100367573 769
45 3300005518 Ga0070699_100058043 Ga0070699_1000580432 770
46 3300013307 Ga0157372_10067833 Ga0157372_100678332 770
47 3300025925 Ga0207650_10006439 Ga0207650_100064394 770
48 3300006237 Ga0097621_100007757 Ga0097621_1000077572 771
49 3300005330 Ga0070690_100002023 Ga0070690_1000020239 772
50 3300005334 Ga0068869_100012679 Ga0068869_1000126793 773
51 3300005617 Ga0068859_100015715 Ga0068859_1000157153 773
52 3300006931 Ga0097620_100015716 Ga0097620_1000157165 773
53 iso_pu_bacteria 2684623219 2687234801 774
54 3300005841 Ga0068863_100010498 Ga0068863_1000104982 775
55 3300009094 Ga0111539_10000001 Ga0111539_10000001600 775
56 3300009147 Ga0114129_10000558 Ga0114129_1000055827 775
57 3300025909 Ga0207705_10001698 Ga0207705_1000169813 775
58 3300026088 Ga0207641_10005021 Ga0207641_100050216 775
59 3300027907 Ga0207428_10000002 Ga0207428_10000002612 775
60 3300050507 nmdc:mga05p37_13759_c1 nmdc:mga05p37_13759_c1_6746_9151 775
61 3300050511 nmdc:mga08y16_3_c1 nmdc:mga08y16_3_c1_657387_659816 775
62 3300005539 Ga0068853_100026720 Ga0068853_1000267202 776
63 3300049581 Ga0501047_0008964 Ga0501047_0008964_6408_8792 776
64 iso_pu_bacteria 2889415604 2889422038 776
65 iso_pu_bacteria 2920107658 2920110266 776
66 3300013102 Ga0157371_10025903 Ga0157371_100259032 777
67 3300048915 Ga0496112_0017465 Ga0496112_0017465_2307_4682 777
68 3300014325 Ga0163163_10000096 Ga0163163_1000009633 778
69 3300050511 nmdc:mga08y16_55739_c1 nmdc:mga08y16_55739_c1_815_3229 778
70 3300005331 Ga0070670_100015734 Ga0070670_1000157342 780
71 3300005617 Ga0068859_100080220 Ga0068859_1000802202 780
72 3300006931 Ga0097620_100080222 Ga0097620_1000802222 780
73 3300013308 Ga0157375_10000037 Ga0157375_1000003714 780
74 3300014325 Ga0163163_10017285 Ga0163163_100172851 780
75 3300049823 Ga0501044_0111443 Ga0501044_0111443_47_2413 780
76 3300046460 Ga0495638_0011232 Ga0495638_0011232_1819_4437 781
77 3300050511 nmdc:mga08y16_8_c1 nmdc:mga08y16_8_c1_566196_568586 781
78 3300053139 Ga0500568_0005616 Ga0500568_0005616_311_2818 781
79 3300006844 Ga0075428_100001255 Ga0075428_1000012555 782
80 3300006846 Ga0075430_100000239 Ga0075430_1000002398 782
81 3300009094 Ga0111539_10000465 Ga0111539_1000046530 782
82 3300009147 Ga0114129_10001623 Ga0114129_1000162319 782
83 3300031548 Ga0307408_100000559 Ga0307408_10000055921 782
84 3300049660 Ga0501216_000941 Ga0501216_000941_1013_3397 782
85 3300050507 nmdc:mga05p37_1148_c1 nmdc:mga05p37_1148_c1_6766_9150 782
86 3300050509 nmdc:mga0qj67_1986_c1 nmdc:mga0qj67_1986_c1_7566_9950 782
87 3300050511 nmdc:mga08y16_156_c1 nmdc:mga08y16_156_c1_56741_59125 782
88 3300049570 Ga0501033_0005641 Ga0501033_0005641_1387_3942 784
89 3300049580 Ga0501046_0026381 Ga0501046_0026381_1365_3920 784
90 3300049581 Ga0501047_0023445 Ga0501047_0023445_2445_5000 784
91 3300049822 Ga0501035_0067095 Ga0501035_0067095_389_2944 784
92 3300006914 Ga0075436_100000027 Ga0075436_10000002751 785
93 3300007076 Ga0075435_100000003 Ga0075435_10000000341 785
94 3300009147 Ga0114129_10018866 Ga0114129_100188665 785
95 3300025960 Ga0207651_10018822 Ga0207651_100188222 785
96 3300046460 Ga0495638_0046424 Ga0495638_0046424_93_2492 785
97 3300050507 nmdc:mga05p37_12550_c1 nmdc:mga05p37_12550_c1_3991_6405 785
98 3300050512 nmdc:mga0n895_40_c1 nmdc:mga0n895_40_c1_1621_4029 785
99 3300050513 nmdc:mga0rr50_7_c1 nmdc:mga0rr50_7_c1_58637_61045 785
100 3300050514 nmdc:mga08x19_60_c1 nmdc:mga08x19_60_c1_43061_45469 785
101 3300014326 Ga0157380_10009848 Ga0157380_100098482 787
102 3300006844 Ga0075428_100003939 Ga0075428_10000393912 788
103 3300006846 Ga0075430_100014186 Ga0075430_1000141863 788
104 3300006847 Ga0075431_100113540 Ga0075431_1001135402 788
105 3300009147 Ga0114129_10001521 Ga0114129_100015218 788
106 3300050507 nmdc:mga05p37_25416_c1 nmdc:mga05p37_25416_c1_96_2519 788
107 3300005719 Ga0068861_100047128 Ga0068861_1000471282 789
108 3300006871 Ga0075434_100004710 Ga0075434_1000047104 789
109 3300050512 nmdc:mga0n895_66857_c1 nmdc:mga0n895_66857_c1_228_2627 789
110 3300009147 Ga0114129_10005367 Ga0114129_100053677 790
111 3300050507 nmdc:mga05p37_128618_c1 nmdc:mga05p37_128618_c1_573_2993 790
112 3300050507 nmdc:mga05p37_3661_c1 nmdc:mga05p37_3661_c1_2405_4843 790
113 3300005471 Ga0070698_100125327 Ga0070698_1001253271 791
114 3300006871 Ga0075434_100003740 Ga0075434_1000037404 791
115 3300006914 Ga0075436_100041546 Ga0075436_1000415462 791
116 3300007076 Ga0075435_100002286 Ga0075435_1000022864 791
117 3300009147 Ga0114129_10022371 Ga0114129_100223714 791
118 3300025922 Ga0207646_10043714 Ga0207646_100437141 791
119 3300049572 Ga0501036_0065376 Ga0501036_0065376_484_3033 791
120 3300049591 Ga0501075_0040907 Ga0501075_0040907_693_3242 791
121 3300050512 nmdc:mga0n895_14687_c1 nmdc:mga0n895_14687_c1_3750_6158 791
122 3300034820 Ga0373959_0001040 Ga0373959_0001040_337_2748 792
123 3300035084 Ga0373928_0001486 Ga0373928_0001486_261_2672 792
124 3300035085 Ga0373929_0001844 Ga0373929_0001844_981_3392 792
125 3300035090 Ga0373949_0003202 Ga0373949_0003202_198_2609 792
126 3300035091 Ga0373951_0001473 Ga0373951_0001473_2287_4698 792
127 3300035112 Ga0373932_0002313 Ga0373932_0002313_1054_3465 792
128 3300035114 Ga0373939_0000529 Ga0373939_0000529_1616_4027 792
129 3300035207 Ga0373942_0000407 Ga0373942_0000407_7067_9478 792
130 3300035241 Ga0373961_0000874 Ga0373961_0000874_4599_7010 792
131 3300006844 Ga0075428_100002083 Ga0075428_1000020833 793
132 3300007076 Ga0075435_100000834 Ga0075435_1000008344 793
133 3300009094 Ga0111539_10000015 Ga0111539_100000153 793
134 3300027907 Ga0207428_10000048 Ga0207428_100000483 793
135 3300049588 Ga0501072_0030040 Ga0501072_0030040_142_2556 793
136 3300050513 nmdc:mga0rr50_330_c1 nmdc:mga0rr50_330_c1_15822_18236 793
137 3300054114 Ga0501084_0025778 Ga0501084_0025778_789_3203 793
138 3300060353 Ga0501082_0073595 Ga0501082_0073595_18_2432 793
139 3300005293 Ga0065715_10000832 Ga0065715_100008323 796
140 3300005444 Ga0070694_100048903 Ga0070694_1000489032 796

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07624

PSD2

Protein of unknown function (DUF1585)

765

838

0.99

PF07631

PSD4

Protein of unknown function (DUF1592)

515

642

0.99

PF07637

PSD5

Protein of unknown function (DUF1595)

441

501

0.98

PF07626

PSD3

Protein of unknown function (DUF1587)

191

254

0.96

PF07627

PSCyt3

Protein of unknown function (DUF1588)

661

752

0.95

PF07635

PSCyt1

Planctomycete cytochrome C

108

154

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5wvp-assembly1.cif.gz_A expression, characterization and crystal structure of a novel beta-glucosidase from paenibacillus barengoltzii 0.633 228 355
5wug-assembly1.cif.gz_A expression, characterization and crystal structure of a novel beta-glucosidase from paenibacillus barengoltzii 0.6211 228 355
1pk6-assembly1.cif.gz_C globular head of the complement system protein c1q 0.5857 232 359
4qqp-assembly1.cif.gz_A crystal structure of c1ql3 mutant d207a 0.5857 232 361
5kc6-assembly1.cif.gz_B crystal structure of cbln1 (val55-gly58 deletion mutant) 0.5834 232 366
ID Description Score Start End Superfamily
af_F1QVK6_71_202_2.60.120.40 Mainly Beta;Sandwich;Jelly Rolls; 0.5862 232 362 2.60.120.40
af_P02747_115_245_2.60.120.40 Mainly Beta;Sandwich;Jelly Rolls; 0.5811 232 356 2.60.120.40
5h49C00 Mainly Beta;Sandwich;Jelly Rolls; 0.5731 232 356 2.60.120.40
af_E7F6Z0_139_281_2.60.120.40 Mainly Beta;Sandwich;Jelly Rolls; 0.5551 232 359 2.60.120.40
af_Q8RUV9_452_584_2.60.120.260 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.5309 228 366 2.60.120.260
ID Description Score Start End GO Terms
AF-A0A523E9Y0-F1-model_v4 DUF1592 domain-containing protein 0.9484 394 794
AF-A0A2A2R486-F1-model_v4 DUF1592 domain-containing protein 0.9457 442 794
AF-A0A3M2BAG2-F1-model_v4 DUF1588 domain-containing protein 0.9454 503 787
AF-A0A382U195-F1-model_v4 DUF1592 domain-containing protein 0.9441 357 583
AF-A0A2V8LRI4-F1-model_v4 DUF1592 domain-containing protein 0.9408 452 794

Feature Viewer

pLDDT pTM Quality
80.97 0.82 High
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Predicted Structure (AlphaFold2)

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