F182764

General Info

Members Datasets Scaffolds Average Seq Length
141 118 136 373

Family's Representative Sequence

Representative Sequence 3300025292|Ga0209676_1005888|Ga0209676_10058882
Length 415
Sequence MRGRAHAGQCSWVVERPRGDANGPEAQSRDYICPVPSSPAPTLFDYPRFVEDLKRRIDDARLSAARAVNRELVGLYWDIGQAIREQQARRGWGDAVVDRLARDLKASFPGTAGFSAASLWRMRQFHETYTAPEFLAQLVRESGLGTPRPRGSRALAAASQPELAQAVREMVEAVPWGHHVNLLSKLEEPAQRLFYLKATARFGWSRNVLLNQIKAQAYERSLAEGKVHNFALALPGHLAEQAEEALKSSYNLEFLGIRREIRERELEDHLIDRLRDFILELGYGFCFVGRQYRLTLGRKEYFIDLLFYHRFLKALVAIELKIGPFEPEFAGKMDFYLNLLNEKERAPDDAPSIGIILCAEKDNLEVEFALKSKSNPIGVAEYQLQGKLPAESARQLQEVLRSSYPRTIPTDRTAR

Samples

Sample ID Description Type Environment
1 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
2 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
3 2899924645 Variovorax sp. 369 Isolate Unclassified
4 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere
5 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
6 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
7 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
8 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
9 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
10 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
14 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
15 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
16 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
17 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
18 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
19 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
20 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
32 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
39 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
42 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
43 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
46 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
51 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
62 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
63 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
64 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
65 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
66 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
69 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
70 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
71 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
72 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
73 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
74 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
78 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
81 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
82 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
83 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
84 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
85 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
86 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
87 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
90 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
91 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
92 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
93 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
94 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
95 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
96 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
97 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
98 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
99 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
100 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
101 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
102 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
105 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
108 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
109 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
110 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
111 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
112 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
113 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
114 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
115 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
116 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
117 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
118 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.45
Metatranscriptomes 0
Isolates 3.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.53
Nodule 0
Rhizoplane 0.71
Rhizosphere 66.67
Stem 0
Stem Tuber 0
Unclassified 7.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000077 3300002773 Bacteria 66044
2 JGI25150J39212_1000567 3300002774 Bacteria 14773
3 JGI25159J45721_1000033 3300002987 Bacteria 89604
4 JGI25151J46595_10000233 3300003187 Bacteria 66027
5 JGI25153J46596_10000118 3300003215 Bacteria 89604
6 rootL2_10178782 3300003322 Bacteria 2787
7 JGI25160J50197_1000094 3300003354 Bacteria 89080
8 JGI25161J50226_1000587 3300003374 Bacteria 15371
9 Ga0055526_1000081 3300003771 Bacteria 87291
10 Ga0055537_1000045 3300003773 Bacteria 89080
11 Ga0055524_1000135 3300003775 Bacteria 87291
12 Ga0055534_1000053 3300003784 Bacteria 90213
13 Ga0055534_1004794 3300003784 Bacteria 3803
14 Ga0055528_1000056 3300003790 Bacteria 89604
15 Ga0055543_1000083 3300004625 Bacteria 83272
16 Ga0065165_1000322 3300005262 Bacteria 78209
17 Ga0070675_100231714 3300005354 Bacteria 1611
18 Ga0070714_100106061 3300005435 Bacteria 2482
19 Ga0070714_100277338 3300005435 Unclassified 1556
20 Ga0068853_100000006 3300005539 Bacteria 295921
21 Ga0070665_100232463 3300005548 Bacteria 1844
22 Ga0075370_10039706 3300006353 Bacteria 2653
23 Ga0105240_10000056 3300009093 Bacteria 224822
24 Ga0105240_10046562 3300009093 Bacteria 5495
25 Ga0105240_10079765 3300009093 Bacteria 4027
26 Ga0111539_10435151 3300009094 Bacteria 1527
27 Ga0114129_10184947 3300009147 Bacteria 2832
28 Ga0105237_10001266 3300009545 Bacteria 33725
29 Ga0105237_10007669 3300009545 Bacteria 11791
30 Ga0105237_10124011 3300009545 Bacteria 2578
31 Ga0105239_10079179 3300010375 Bacteria 3616
32 Ga0105239_10110746 3300010375 Bacteria 3043
33 Ga0157373_10000940 3300013100 Bacteria 22540
34 Ga0157371_10000019 3300013102 Bacteria 307914
35 Ga0157370_10257095 3300013104 Bacteria 1614
36 Ga0157369_10000843 3300013105 Bacteria 39252
37 Ga0157374_10077277 3300013296 Bacteria 3150
38 Ga0157378_10179458 3300013297 Bacteria 1991
39 Ga0163163_10497397 3300014325 Bacteria 1281
40 Ga0182008_10000720 3300014497 Bacteria 23630
41 Ga0182007_10000708 3300015262 Bacteria 19011
42 Ga0163161_10002880 3300017792 Bacteria 12189
43 Ga0207425_1000090 3300025245 Bacteria 90459
44 Ga0209129_1000030 3300025258 Bacteria 391958
45 Ga0209565_1000019 3300025263 Bacteria 438920
46 Ga0209673_1000095 3300025273 Bacteria 197466
47 Ga0209130_1000011 3300025284 Bacteria 431723
48 Ga0209675_1000031 3300025291 Bacteria 273599
49 Ga0209675_1017731 3300025291 Bacteria 2022
50 Ga0209676_1005888 3300025292 Bacteria 6233
51 Ga0209025_1000078 3300025294 Bacteria 271683
52 Ga0209564_1000056 3300025295 Bacteria 340873
53 Ga0209758_1000037 3300025297 Bacteria 439101
54 Ga0209256_1000043 3300025299 Bacteria 340873
55 Ga0207426_1000029 3300025302 Bacteria 473835
56 Ga0209051_1027849 3300025303 Bacteria 2243
57 Ga0209257_1000127 3300025304 Bacteria 214847
58 Ga0207695_10000103 3300025913 Bacteria 257354
59 Ga0207695_10001188 3300025913 Bacteria 44859
60 Ga0207695_10220893 3300025913 Bacteria 1802
61 Ga0207671_10007106 3300025914 Bacteria 9786
62 Ga0207671_10072019 3300025914 Bacteria 2578
63 Ga0207662_10200705 3300025918 Bacteria 1291
64 Ga0207646_10250892 3300025922 Bacteria 1599
65 Ga0207639_10000001 3300026041 Bacteria 1431562
66 Ga0268266_10160393 3300028379 Bacteria 2034
67 Ga0265334_10012329 3300028573 Bacteria 3594
68 Ga0265323_10000025 3300028653 Bacteria 82188
69 Ga0265323_10001782 3300028653 Bacteria 10218
70 Ga0307515_10132179 3300028794 Bacteria 2740
71 Ga0265320_10034677 3300031240 Bacteria 2564
72 Ga0265327_10001673 3300031251 Bacteria 26622
73 Ga0265327_10010531 3300031251 Bacteria 6485
74 Ga0265316_10001573 3300031344 Bacteria 24403
75 Ga0265316_10002041 3300031344 Bacteria 21260
76 Ga0265316_10040527 3300031344 Bacteria 3733
77 Ga0307513_10020867 3300031456 Bacteria 7752
78 Ga0307408_100022024 3300031548 Bacteria 4323
79 Ga0307508_10000925 3300031616 Bacteria 34107
80 Ga0265342_10007663 3300031712 Bacteria 7862
81 Ga0307405_10008229 3300031731 Bacteria 5274
82 Ga0307410_10042154 3300031852 Bacteria 3015
83 Ga0307406_10015678 3300031901 Bacteria 4392
84 Ga0307412_10034514 3300031911 Bacteria 3224
85 Ga0307409_100081416 3300031995 Bacteria 2617
86 Ga0307409_100152774 3300031995 Bacteria 2007
87 Ga0307416_100012091 3300032002 Bacteria 5796
88 Ga0307416_100032043 3300032002 Bacteria 3966
89 Ga0373943_0004468 3300035170 Bacteria 6328
90 Ga0373937_0408763 3300036401 Bacteria 1288
91 Ga0436365_1857504 3300039437 Unclassified 1391
92 Ga0436361_0673381 3300039447 Bacteria 1541
93 Ga0439466_0035663 3300041411 Bacteria 1682
94 Ga0451855_2037403 3300041511 Unclassified 1414
95 Ga0439445_0005776 3300042004 Bacteria 2828
96 Ga0439432_019381 3300042006 Bacteria 2267
97 Ga0439449_0005635 3300042007 Bacteria 4790
98 Ga0439452_007006 3300042010 Bacteria 3482
99 Ga0453683_0129697 3300044673 Bacteria 1588
100 Ga0451576_0018453 3300045051 Bacteria 7647
101 Ga0495651_0020683 3300046462 Bacteria 5109
102 Ga0495639_0016117 3300046475 Bacteria 3242
103 Ga0495628_0313963 3300046516 Bacteria 1158
104 Ga0495630_0241654 3300046517 Bacteria 1380
105 Ga0495630_0343571 3300046517 Bacteria 1142
106 Ga0495665_0107057 3300046531 Bacteria 1467
107 Ga0495675_0203530 3300047444 Bacteria 1204
108 Ga0495684_0008192 3300047471 Bacteria 8090
109 Ga0495684_0105649 3300047471 Bacteria 2127
110 Ga0495686_0019635 3300047472 Bacteria 4514
111 Ga0495593_0031352 3300047673 Bacteria 2904
112 Ga0495593_0093036 3300047673 Bacteria 1552
113 Ga0496110_0073719 3300048913 Bacteria 3029
114 Ga0496122_0009641 3300048925 Bacteria 10109
115 Ga0496124_0008054 3300048927 Bacteria 11082
116 Ga0496125_0133031 3300048928 Bacteria 1746
117 Ga0501037_0000225 3300049573 Bacteria 49210
118 Ga0501038_0341462 3300049574 Unclassified 1168
119 Ga0501067_0104332 3300049583 Bacteria 1575
120 Ga0501070_0199284 3300049586 Unclassified 1644
121 Ga0501073_0121608 3300049589 Unclassified 1809
122 Ga0501073_0226855 3300049589 Unclassified 1290
123 Ga0501079_0108338 3300049741 Bacteria 2157
124 Ga0501080_0098967 3300049742 Unclassified 2706
125 Ga0501083_0001290 3300049744 Bacteria 16949
126 Ga0501083_0023781 3300049744 Bacteria 4248
127 Ga0501083_0072004 3300049744 Unclassified 2297
128 Ga0501035_0078378 3300049822 Bacteria 2919
129 nmdc:mga0k408_84122_c1 3300050493 Bacteria 1866
130 nmdc:mga05p37_209978_c1 3300050507 Unclassified 2354
131 Ga0500571_000034 3300053110 Bacteria 44157
132 Ga0500564_005864 3300053138 Bacteria 5068
133 Ga0500622_0001168 3300053156 Bacteria 21758
134 Ga0500636_0034071 3300053177 Bacteria 3014
135 Ga0501084_0005058 3300054114 Bacteria 10790
136 Ga0501082_0018934 3300060353 Bacteria 5931

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300014325 Ga0163163_10497397 Ga0163163_104973971 284
2 3300046516 Ga0495628_0313963 Ga0495628_0313963_76_996 300
3 3300049574 Ga0501038_0341462 Ga0501038_0341462_163_1119 312
4 3300049583 Ga0501067_0104332 Ga0501067_0104332_471_1427 312
5 3300049586 Ga0501070_0199284 Ga0501070_0199284_636_1592 312
6 3300049589 Ga0501073_0121608 Ga0501073_0121608_627_1583 312
7 3300049741 Ga0501079_0108338 Ga0501079_0108338_400_1356 312
8 3300031251 Ga0265327_10010531 Ga0265327_100105313 327
9 3300041511 Ga0451855_2037403 Ga0451855_2037403_310_1356 330
10 3300048913 Ga0496110_0073719 Ga0496110_0073719_1752_2807 333
11 3300046517 Ga0495630_0343571 Ga0495630_0343571_52_1095 335
12 3300047471 Ga0495684_0105649 Ga0495684_0105649_850_1893 335
13 3300031852 Ga0307410_10042154 Ga0307410_100421543 337
14 3300031995 Ga0307409_100081416 Ga0307409_1000814163 337
15 3300032002 Ga0307416_100012091 Ga0307416_1000120912 337
16 3300046517 Ga0495630_0241654 Ga0495630_0241654_75_1106 337
17 3300046531 Ga0495665_0107057 Ga0495665_0107057_49_1080 337
18 3300047673 Ga0495593_0093036 Ga0495593_0093036_259_1290 337
19 iso_pu_bacteria 2585428061 2587752477 337
20 3300047444 Ga0495675_0203530 Ga0495675_0203530_30_1064 338
21 3300025913 Ga0207695_10001188 Ga0207695_1000118821 339
22 3300025914 Ga0207671_10007106 Ga0207671_100071068 339
23 3300031344 Ga0265316_10040527 Ga0265316_100405272 340
24 3300039437 Ga0436365_1857504 Ga0436365_1857504_174_1235 340
25 3300049573 Ga0501037_0000225 Ga0501037_0000225_44041_45081 340
26 3300017792 Ga0163161_10002880 Ga0163161_100028804 341
27 3300031344 Ga0265316_10001573 Ga0265316_100015739 341
28 3300031616 Ga0307508_10000925 Ga0307508_100009257 341
29 3300036401 Ga0373937_0408763 Ga0373937_0408763_175_1227 341
30 3300041411 Ga0439466_0035663 Ga0439466_0035663_199_1242 341
31 3300046462 Ga0495651_0020683 Ga0495651_0020683_1577_2629 341
32 3300047471 Ga0495684_0008192 Ga0495684_0008192_1144_2196 341
33 3300005435 Ga0070714_100106061 Ga0070714_1001060611 342
34 3300005435 Ga0070714_100277338 Ga0070714_1002773382 342
35 3300009545 Ga0105237_10001266 Ga0105237_100012669 342
36 3300053156 Ga0500622_0001168 Ga0500622_0001168_7202_8494 343
37 3300049744 Ga0501083_0001290 Ga0501083_0001290_12450_13562 344
38 3300028794 Ga0307515_10132179 Ga0307515_101321793 345
39 3300031251 Ga0265327_10001673 Ga0265327_1000167317 345
40 3300035170 Ga0373943_0004468 Ga0373943_0004468_1355_2644 346
41 3300031456 Ga0307513_10020867 Ga0307513_100208675 348
42 3300005548 Ga0070665_100232463 Ga0070665_1002324632 350
43 3300013102 Ga0157371_10000019 Ga0157371_1000001990 350
44 3300028379 Ga0268266_10160393 Ga0268266_101603932 350
45 3300031240 Ga0265320_10034677 Ga0265320_100346771 351
46 3300039447 Ga0436361_0673381 Ga0436361_0673381_215_1372 351
47 3300049589 Ga0501073_0226855 Ga0501073_0226855_13_1152 351
48 3300025922 Ga0207646_10250892 Ga0207646_102508922 356
49 3300044673 Ga0453683_0129697 Ga0453683_0129697_279_1376 357
50 3300045051 Ga0451576_0018453 Ga0451576_0018453_5573_6670 357
51 3300005354 Ga0070675_100231714 Ga0070675_1002317141 358
52 3300013296 Ga0157374_10077277 Ga0157374_100772773 358
53 3300013297 Ga0157378_10179458 Ga0157378_101794582 358
54 3300050493 nmdc:mga0k408_84122_c1 nmdc:mga0k408_84122_c1_350_1483 358
55 3300049822 Ga0501035_0078378 Ga0501035_0078378_415_1608 359
56 3300031548 Ga0307408_100022024 Ga0307408_1000220244 360
57 3300031731 Ga0307405_10008229 Ga0307405_100082293 360
58 3300031901 Ga0307406_10015678 Ga0307406_100156784 360
59 3300031911 Ga0307412_10034514 Ga0307412_100345142 360
60 3300031995 Ga0307409_100152774 Ga0307409_1001527742 360
61 3300032002 Ga0307416_100032043 Ga0307416_1000320432 360
62 iso_pu_bacteria 2920107658 2920114636 361
63 3300049742 Ga0501080_0098967 Ga0501080_0098967_1023_2153 362
64 3300049744 Ga0501083_0072004 Ga0501083_0072004_636_1766 362
65 3300054114 Ga0501084_0005058 Ga0501084_0005058_5972_7102 362
66 3300060353 Ga0501082_0018934 Ga0501082_0018934_2833_3963 362
67 3300003322 rootL2_10178782 rootL2_101787822 363
68 3300028653 Ga0265323_10000025 Ga0265323_1000002515 363
69 3300031344 Ga0265316_10002041 Ga0265316_100020419 363
70 3300031712 Ga0265342_10007663 Ga0265342_100076635 363
71 3300005539 Ga0068853_100000006 Ga0068853_100000006153 364
72 3300026041 Ga0207639_10000001 Ga0207639_100000011052 364
73 3300025918 Ga0207662_10200705 Ga0207662_102007051 366
74 3300042004 Ga0439445_0005776 Ga0439445_0005776_1617_2735 366
75 3300042006 Ga0439432_019381 Ga0439432_019381_623_1741 366
76 3300042007 Ga0439449_0005635 Ga0439449_0005635_263_1381 366
77 3300042010 Ga0439452_007006 Ga0439452_007006_169_1287 366
78 3300003784 Ga0055534_1004794 Ga0055534_10047944 367
79 3300006353 Ga0075370_10039706 Ga0075370_100397063 367
80 3300009093 Ga0105240_10079765 Ga0105240_100797654 367
81 3300013104 Ga0157370_10257095 Ga0157370_102570952 367
82 3300025291 Ga0209675_1017731 Ga0209675_10177312 367
83 3300048928 Ga0496125_0133031 Ga0496125_0133031_395_1516 367
84 3300009093 Ga0105240_10000056 Ga0105240_1000005629 368
85 3300010375 Ga0105239_10079179 Ga0105239_100791792 368
86 3300025913 Ga0207695_10000103 Ga0207695_1000010329 368
87 3300049744 Ga0501083_0023781 Ga0501083_0023781_581_1792 368
88 3300013100 Ga0157373_10000940 Ga0157373_100009408 369
89 iso_pu_bacteria 2885192300 2885193987 369
90 3300028573 Ga0265334_10012329 Ga0265334_100123292 370
91 3300046475 Ga0495639_0016117 Ga0495639_0016117_527_1657 370
92 3300047673 Ga0495593_0031352 Ga0495593_0031352_1238_2368 370
93 3300053110 Ga0500571_000034 Ga0500571_000034_13714_14844 370
94 3300053138 Ga0500564_005864 Ga0500564_005864_159_1289 370
95 3300053177 Ga0500636_0034071 Ga0500636_0034071_944_2074 370
96 3300009147 Ga0114129_10184947 Ga0114129_101849471 371
97 3300009545 Ga0105237_10124011 Ga0105237_101240112 371
98 3300014497 Ga0182008_10000720 Ga0182008_100007204 371
99 3300015262 Ga0182007_10000708 Ga0182007_100007088 371
100 3300025914 Ga0207671_10072019 Ga0207671_100720192 371
101 3300050507 nmdc:mga05p37_209978_c1 nmdc:mga05p37_209978_c1_790_1929 371
102 3300009094 Ga0111539_10435151 Ga0111539_104351511 377
103 iso_pu_bacteria 2899924645 2899926766 377
104 iso_pu_bacteria 2928064002 2928070681 377
105 3300028653 Ga0265323_10001782 Ga0265323_100017825 379
106 3300009093 Ga0105240_10046562 Ga0105240_100465622 381
107 3300009545 Ga0105237_10007669 Ga0105237_100076692 381
108 3300010375 Ga0105239_10110746 Ga0105239_101107462 381
109 3300013105 Ga0157369_10000843 Ga0157369_1000084315 381
110 3300025913 Ga0207695_10220893 Ga0207695_102208932 381
111 3300048925 Ga0496122_0009641 Ga0496122_0009641_1072_2235 381
112 3300048927 Ga0496124_0008054 Ga0496124_0008054_2153_3316 381
113 3300047472 Ga0495686_0019635 Ga0495686_0019635_1773_3077 382
114 3300002773 JGI25152J39213_1000077 JGI25152J39213_100007755 404
115 3300002774 JGI25150J39212_1000567 JGI25150J39212_10005675 404
116 3300002987 JGI25159J45721_1000033 JGI25159J45721_100003376 404
117 3300003187 JGI25151J46595_10000233 JGI25151J46595_1000023354 404
118 3300003215 JGI25153J46596_10000118 JGI25153J46596_1000011876 404
119 3300003354 JGI25160J50197_1000094 JGI25160J50197_100009413 404
120 3300003374 JGI25161J50226_1000587 JGI25161J50226_10005873 404
121 3300003771 Ga0055526_1000081 Ga0055526_100008173 404
122 3300003773 Ga0055537_1000045 Ga0055537_100004576 404
123 3300003775 Ga0055524_1000135 Ga0055524_100013513 404
124 3300003784 Ga0055534_1000053 Ga0055534_100005377 404
125 3300003790 Ga0055528_1000056 Ga0055528_100005676 404
126 3300004625 Ga0055543_1000083 Ga0055543_100008368 404
127 3300005262 Ga0065165_1000322 Ga0065165_100032265 404
128 3300025245 Ga0207425_1000090 Ga0207425_100009075 404
129 3300025258 Ga0209129_1000030 Ga0209129_1000030186 404
130 3300025263 Ga0209565_1000019 Ga0209565_1000019258 404
131 3300025273 Ga0209673_1000095 Ga0209673_1000095177 404
132 3300025284 Ga0209130_1000011 Ga0209130_1000011250 404
133 3300025291 Ga0209675_1000031 Ga0209675_1000031108 404
134 3300025292 Ga0209676_1005888 Ga0209676_10058882 404
135 3300025294 Ga0209025_1000078 Ga0209025_1000078106 404
136 3300025295 Ga0209564_1000056 Ga0209564_1000056173 404
137 3300025297 Ga0209758_1000037 Ga0209758_1000037153 404
138 3300025299 Ga0209256_1000043 Ga0209256_1000043173 404
139 3300025302 Ga0207426_1000029 Ga0207426_1000029153 404
140 3300025303 Ga0209051_1027849 Ga0209051_10278492 404
141 3300025304 Ga0209257_1000127 Ga0209257_100012775 404

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06250

YhcG_C

YhcG PDDEXK nuclease domain

243

400

0.97

PF17761

DUF1016_N

DUF1016 N-terminal domain

52

220

0.95

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pLDDT pTM Quality
75.33 0.48 Low
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Predicted Structure (AlphaFold2)

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